Citrus Sinensis ID: 002343
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 934 | 2.2.26 [Sep-21-2011] | |||||||
| P32361 | 1115 | Serine/threonine-protein | yes | no | 0.452 | 0.379 | 0.347 | 2e-77 | |
| Q09499 | 967 | Serine/threonine-protein | yes | no | 0.406 | 0.392 | 0.372 | 1e-76 | |
| O94537 | 1072 | Serine/threonine-protein | yes | no | 0.490 | 0.427 | 0.321 | 8e-70 | |
| Q55GJ2 | 984 | Probable serine/threonine | yes | no | 0.433 | 0.411 | 0.350 | 4e-69 | |
| Q76MJ5 | 926 | Serine/threonine-protein | yes | no | 0.415 | 0.419 | 0.331 | 1e-66 | |
| Q9Z2E3 | 911 | Serine/threonine-protein | yes | no | 0.408 | 0.419 | 0.319 | 6e-64 | |
| Q9EQY0 | 977 | Serine/threonine-protein | no | no | 0.411 | 0.393 | 0.311 | 1e-63 | |
| O75460 | 977 | Serine/threonine-protein | no | no | 0.408 | 0.390 | 0.312 | 4e-63 | |
| Q55DJ9 | 1505 | Probable serine/threonine | no | no | 0.410 | 0.254 | 0.279 | 6e-42 | |
| Q55DJ8 | 1444 | Probable serine/threonine | no | no | 0.407 | 0.263 | 0.268 | 4e-39 |
| >sp|P32361|IRE1_YEAST Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRE1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 259/480 (53%), Gaps = 57/480 (11%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
+ LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN++
Sbjct: 670 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 729
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R+Y E+ F+Y++LE C +L DL+ E N +++ L E P+
Sbjct: 730 RYYCSETTDRFLYIALELCNLNLQDLV--------ESKNVSDENLKLQKEYN----PI-- 775
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK-- 648
+ R I SG++HLH + +IHRDLKPQN+L+S F A
Sbjct: 776 -------------------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ 816
Query: 649 ---------LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKL---VICECVFQFG 696
+SD G+ K+L S N + LL+ + C+ +
Sbjct: 817 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQCQVETEHS 876
Query: 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK 756
TV S + + + R TR+ID+FS+GC+ ++ ++ GKHP+G+ + R++NI++
Sbjct: 877 SSRHTVVSSDSFY---DPFTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 933
Query: 757 ------DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDV 810
+ K L I EA DL ++++D +P RP A VL HP FW +L FL V
Sbjct: 934 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKV 993
Query: 811 SDRVELEDRESDSKLLRALE-GIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLR 869
SDR+E+E+R+ S LL + G V +G W K + F++N+ RYR+Y + DLLR
Sbjct: 994 SDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSKLMDLLR 1053
Query: 870 VIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 929
+RNK +HF +LP+DI EL+G P+GFY+YF+ RFP LLI VY ++ +++ +++
Sbjct: 1054 ALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREFL 1113
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Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices HAC1 precursor mRNA to produce the mature form which then induces transcription of UPR target genes. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3EC: .EC: 1EC: .EC: 2EC: 6EC: .EC: - |
| >sp|Q09499|IRE1_CAEEL Serine/threonine-protein kinase/endoribonuclease ire-1 OS=Caenorhabditis elegans GN=ire-1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 247/459 (53%), Gaps = 79/459 (17%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540
+ G GTVV G ++GR VAVKR+V A +E L SD HP+++R++ +ESD
Sbjct: 524 LGTGCEGTVVYRGTFDGREVAVKRVVSEFVKFAHREADLLRESDTHPHVIRYFCMESDSQ 583
Query: 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600
F YL+LE C SLND + EQ KE N V I L +M+ D
Sbjct: 584 FRYLALELCIASLNDYV--------EQ---KEVQQN----VTIALRDIMKQATD------ 622
Query: 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI---SKDKSFCAKLSDMGISKR 657
GL+HLH ++HRD+KPQNVLI S+ A +SD G+ KR
Sbjct: 623 -----------------GLAHLHASKIVHRDMKPQNVLITMASQRGEMRAVISDFGLCKR 665
Query: 658 LQGDMSCLTQN-ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL 716
+Q + +++ A+G+ G+ GW APE L+
Sbjct: 666 VQPGKNSISRGIASGL-------------------------------AGTDGWIAPEVLI 694
Query: 717 QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE---AVDL 773
+ +D+FSLGCI ++ +T G HP+G+S R ANIV L + + + A DL
Sbjct: 695 SASTSYPVDIFSLGCIFYYVLTSGTHPFGKSLHRQANIVNGEYTLNKLADLDDWSLADDL 754
Query: 774 FTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIA 833
+ +L+ P R A VLNHPFFWT++ RL++ DVSDRVE E E +S ++R +E A
Sbjct: 755 ISSMLNVEPLHRLTADAVLNHPFFWTSEKRLAYFSDVSDRVEKE--EDNSPVVRRIETDA 812
Query: 834 LVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHP 893
+ + G W EK+ E++ ++R YK +VRDLLR +RNK +H+RELP+D+++ LG P
Sbjct: 813 RIVVCGGWREKICDALKEDLRKFRTYKSFSVRDLLRAMRNKKHHYRELPEDVRQSLGDIP 872
Query: 894 EGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
+ F +YF+ RFP+LL+ VY YC GE VF +Y ++D
Sbjct: 873 DQFLHYFTSRFPRLLLHVYKAT-EYCSGEAVFKRYYSDD 910
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Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices xbp-1 precursor mRNA to produce the mature form which then induces transcription of UPR target genes. Unfolded protein response (UPR) transcripional activation by ire-1, as well as translational attenuation by pek-1 in a complementary pathway, maintains ER homeostasis. Ire-1 and pek-1 are redundant genes that control a pathway essential for larval development and survival. Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 6 EC: . EC: - |
| >sp|O94537|PPK4_SCHPO Serine/threonine-protein kinase ppk4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 266 bits (679), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 271/532 (50%), Gaps = 74/532 (13%)
Query: 415 RPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKL 474
+ + +N T +NI+ + K TD L + K L +I + + L
Sbjct: 596 QASFEQNQTLDILSENIVEIQDK--STDPLQKSLDSSLKSHLPEATVIQNTDGSVTVNSL 653
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYG 534
V+ + I GS+GT+V G YE R VAVKR++ +D+A +EI L SD HPNIVR+Y
Sbjct: 654 TVYPEVIGYGSHGTIVYRGVYEDREVAVKRVLMEFYDLASREITLLQQSDNHPNIVRYYC 713
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ F+Y+ +E C C+L+DLI E+ P+ +
Sbjct: 714 KQKSDQFLYIVIELCKCNLSDLI--------------EK-------------PIAYD--- 743
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS-------FCA 647
+L+K S L+ + I G+SHLH + L+HRDLKPQN+L+ + S A
Sbjct: 744 -DLFK-----SIDLVSLLYQIAFGVSHLHSLDLVHRDLKPQNILLVVNNSPNLSKTRVRA 797
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
+SD G+SK+L + S L +N T E +G + GS
Sbjct: 798 LISDFGLSKKLDFNQSSL-RNTT------------------FEAAGSYGWRSPEILSGSL 838
Query: 708 GWQAPEQLLQGRQTR------AIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
Q+ E ++ R+ R A D+F+LGCI ++ +TGG HP+G ++ + NI+K L
Sbjct: 839 SQQSKEIQVKTREGRIRQASHATDIFALGCIFYYTLTGGMHPFGSHYDCEGNILKGNYCL 898
Query: 762 FLVEHIPE----AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
++ + E A DL ++ P RP + VLNHP FW +L FL DVSDR E+E
Sbjct: 899 VHLQSLGECGVLAADLIEDMIAFEPSKRPTIEVVLNHPLFWDYAKKLDFLIDVSDRFEVE 958
Query: 818 DRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNH 877
+R+ S LL+ LE + + W + + ++N+G+YR+Y + D+LRV+RNK +H
Sbjct: 959 ERDPPSPLLQMLENNSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRHH 1018
Query: 878 FRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 929
+++LP+ ++ +LG P+GF +YF +FP LL+ Y+++ E F +Y+
Sbjct: 1019 YQDLPESVRRVLGDLPDGFTSYFVEKFPMLLLHCYHLVKDVLYEESQFKRYL 1070
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q55GJ2|IREA_DICDI Probable serine/threonine-protein kinase ireA OS=Dictyostelium discoideum GN=ireA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 263 bits (673), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 249/468 (53%), Gaps = 63/468 (13%)
Query: 470 RIGKL-VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN 528
+IGKL ++ NK + GS GT+V EG EGR VAVKR++ A +E+ LI SD+H N
Sbjct: 569 KIGKLEIITNKILGTGSCGTIVYEGKMEGRKVAVKRMLSQFVKFADREVSILIHSDEHTN 628
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+VR+Y E D +F+YL++ C SL+ +YV + Q++ + S + +
Sbjct: 629 VVRYYAKEEDDEFIYLAISFCQKSLD--MYV-QQTLSLQISPTDSPS-IQSSNNNGNGNN 684
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
N + ++ N + ++ ++ GL HLH + ++HRD+KP NVLI D + K
Sbjct: 685 GNNNNNNQIIIDN-----KTKQMILELFKGLEHLHSLNIVHRDIKPHNVLI--DPNNRVK 737
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+SDMG+ K L D LT FT S G
Sbjct: 738 ISDMGLGKLLDNDDQSLT---------------------------------FTSD--SHG 762
Query: 709 WQAPEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH 766
WQ P + L G R T+ +D+FSLGC++++ +TG HP+G + R+ N++K + D+ ++H
Sbjct: 763 WQ-PAEYLNGTNRNTKKVDIFSLGCVVYYLLTGA-HPFGHRYNREKNVLKGKFDIDQIKH 820
Query: 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE------DRE 820
+P+ L ++ P+ RP +NHPFFW +LSFL SD +E E + E
Sbjct: 821 LPDIHQLVHSMIQFEPEKRPDIGECINHPFFWEVHKKLSFLVAASDYLEFEKPTSPLNLE 880
Query: 821 SDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRE 880
DS + +G +G W K++ I+NIGRYR+Y ++RDLLRVIRNK NH+R+
Sbjct: 881 IDSHVDLVTDG------SGDWWLKIDQVLIDNIGRYRKYNGKSIRDLLRVIRNKFNHYRD 934
Query: 881 LPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
L + Q LG P+GF+NYF +FP+L I Y I K ++ F +Y
Sbjct: 935 LSPEEQTCLGILPDGFFNYFDLKFPQLFIVTYLFILKNLKNDQYFVQY 982
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Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q76MJ5|ERN2_HUMAN Serine/threonine-protein kinase/endoribonuclease IRE2 OS=Homo sapiens GN=ERN2 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 233/473 (49%), Gaps = 85/473 (17%)
Query: 471 IGKLVVFNKEI-AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
+GK+ K++ +G+ GT V G +EGR+VAVKRL++ + +E+Q L SD+HPN+
Sbjct: 515 VGKISFNPKDVLGRGAGGTFVFRGQFEGRAVAVKRLLRECFGLVRREVQLLQESDRHPNV 574
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R++ E F Y++LE C SL + + N L EV
Sbjct: 575 LRYFCTERGPQFHYIALELCRASLQEYVE----------NPDLDRGGLEPEV-------- 616
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC--- 646
V + ++SGL+HLH + ++HRDLKP N+LI+ S
Sbjct: 617 ---------------------VLQQLMSGLAHLHSLHIVHRDLKPGNILITGPDSQGLGR 655
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
LSD G+ K+L C G+ G+
Sbjct: 656 VVLSDFGLCKKLPAGR--------------------------CSFSLHSGI------PGT 683
Query: 707 SGWQAPE--QLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL-F 762
GW APE QLL T A+D+FS GC+ ++ ++GG HP+G+S R ANI+ L
Sbjct: 684 EGWMAPELLQLLPPDSPTSAVDIFSAGCVFYYVLSGGSHPFGDSLYRQANILTGAPCLAH 743
Query: 763 LVEHIPEAV---DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDR 819
L E + + V DL +L P P RP A VL HPFFW+ +L F +DVSD +E E
Sbjct: 744 LEEEVHDKVVARDLVGAMLSPLPQPRPSAPQVLAHPFFWSRAKQLQFFQDVSDWLEKESE 803
Query: 820 ESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFR 879
+ L+RALE + W E + ++ ++R YK +VRDLLR +RNK +H+R
Sbjct: 804 QE--PLVRALEAGGCAVVRDNWHEHISMPLQTDLRKFRSYKGTSVRDLLRAVRNKKHHYR 861
Query: 880 ELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
ELP ++++ LG P+GF YF+ RFP+LL+ + + + C E +F Y D
Sbjct: 862 ELPVEVRQALGQVPDGFVQYFTNRFPRLLLHTHRAMRS-CASESLFLPYYPPD 913
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Induces translational repression through 28S ribosomal RNA cleavage in response to ER stress. Pro-apoptotic. Appears to play no role in the unfolded-protein response, unlike closely related proteins. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 6 EC: . EC: - |
| >sp|Q9Z2E3|ERN2_MOUSE Serine/threonine-protein kinase/endoribonuclease IRE2 OS=Mus musculus GN=Ern2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 246 bits (628), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 230/470 (48%), Gaps = 88/470 (18%)
Query: 471 IGKLVVFNKEI-AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
+GK+ K++ +G+ GT V G +EGR+VAVKRL++ + +E+Q L SD+HPN+
Sbjct: 503 VGKISFNPKDVLGRGAGGTFVFRGQFEGRAVAVKRLLRECFGLVRREVQLLQESDRHPNV 562
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R++ E F Y++LE C SL + +
Sbjct: 563 LRYFCTEHGPQFHYIALELCQASLQEYV-------------------------------- 590
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK- 648
+ D++ W + V + ++SGL+HLH + ++HRDLKP N+L++ S
Sbjct: 591 -ESPDLDRW------GLEPTTVLQQMMSGLAHLHSLHIVHRDLKPANILMAGPDSQGQGR 643
Query: 649 --LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF--GVLFFTVGY 704
+SD G+ K KL + C F G+
Sbjct: 644 VVISDFGLCK----------------------------KLPVGRCSFSLHSGI------P 669
Query: 705 GSSGWQAPE--QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF 762
G+ GW APE QL T A+D+FS GC+ ++ ++GG HP+GES R ANI+ L
Sbjct: 670 GTEGWMAPELLQLPPDSPTSAVDIFSAGCVFYYVLSGGSHPFGESLYRQANILSGDPCLA 729
Query: 763 LVEHIPE----AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELED 818
++ A+DL +L P RP A VL HP FW+ L F +DVSD +E E
Sbjct: 730 QLQEETHDKVVALDLVRAMLSLLPQDRPSAGWVLAHPLFWSRAKELQFFQDVSDWLEKEP 789
Query: 819 RESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHF 878
+ L+ ALE + + W + + ++ R+R YK +VRDLLR +RNK +H+
Sbjct: 790 DQG--PLVSALEAGSYKVVREDWHKHISAPLQADLKRFRSYKGTSVRDLLRAMRNKKHHY 847
Query: 879 RELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
RELP ++++ LG P GF YF+ RFP+LL+ + + T C E +F Y
Sbjct: 848 RELPAEVRQTLGQLPAGFIQYFTQRFPRLLLHTHRAMRT-CASESLFLPY 896
|
Role in expression of the DDIT3 transcription factor, required for the unfolded-protein response, growth arrest and apoptosis. Has no effect on 28S ribosomal RNA cleavage, unlike the corresponding human protein. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 6 EC: . EC: - |
| >sp|Q9EQY0|ERN1_MOUSE Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Mus musculus GN=Ern1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 232/469 (49%), Gaps = 85/469 (18%)
Query: 471 IGKLVVFNKEI-AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
+GK+ K++ G+ GT+V +G ++ R VAVKR++ A +E+Q L SD+HPN+
Sbjct: 566 VGKISFCPKDVLGHGAEGTIVYKGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV 625
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R++ E D+ F Y+++E C +L + YV F
Sbjct: 626 IRYFCTEKDRQFQYIAIELCAATLQE--YVEQKDF------------------------- 658
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS---FC 646
H + + + SGL+HLH + ++HRDLKP N+L+S +
Sbjct: 659 ------------AHLGLEPITLLHQTTSGLAHLHSLNIVHRDLKPHNILLSMPNAHGRIK 706
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
A +SD G+ K+L ++ + GV G+
Sbjct: 707 AMISDFGLCKKLAVGRHSFSRRS--------------------------GVP------GT 734
Query: 707 SGWQAPEQL---LQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV--KDRKDL 761
GW APE L + T +D+FS GC+ ++ I+ G HP+G+S +R ANI+ D
Sbjct: 735 EGWIAPEMLSEDCKDNPTYTVDIFSAGCVFYYVISEGNHPFGKSLQRQANILLGACNLDC 794
Query: 762 FLVEHIPEAV--DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDR 819
F + + + +L +++ +P RP A++VL HPFFW+ + +L F +DVSDR+E E
Sbjct: 795 FHSDKHEDVIARELIEKMIAMDPQQRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKE-- 852
Query: 820 ESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFR 879
D ++R LE + W E + ++ ++R YK +VRDLLR +RNK +H+R
Sbjct: 853 ALDGPIVRQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKKHHYR 912
Query: 880 ELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
ELP ++QE LGS P+ F YF+ RFP LL Y + C+ E +F Y
Sbjct: 913 ELPVEVQETLGSIPDDFVRYFTSRFPHLLSHTYQAM-ELCRHERLFQTY 960
|
Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices XBP1 mRNA to generate a new C-terminus, converting it into a potent unfolded-protein response transcriptional activator and triggering growth arrest and apoptosis. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 6 EC: . EC: - |
| >sp|O75460|ERN1_HUMAN Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Homo sapiens GN=ERN1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 243 bits (621), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 231/471 (49%), Gaps = 89/471 (18%)
Query: 471 IGKLVVFNKEI-AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
+GK+ K++ G+ GT+V G ++ R VAVKR++ A +E+Q L SD+HPN+
Sbjct: 566 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV 625
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R++ E D+ F Y+++E C +L + YV F
Sbjct: 626 IRYFCTEKDRQFQYIAIELCAATLQE--YVEQKDF------------------------- 658
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS---FC 646
H + + + + SGL+HLH + ++HRDLKP N+LIS +
Sbjct: 659 ------------AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIK 706
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
A +SD G+ K+L ++ + GV G+
Sbjct: 707 AMISDFGLCKKLAVGRHSFSRRS--------------------------GVP------GT 734
Query: 707 SGWQAPEQL---LQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL 763
GW APE L + T +D+FS GC+ ++ I+ G HP+G+S +R ANI+ L
Sbjct: 735 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC 794
Query: 764 VEHIPE------AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
+ PE A +L +++ +P RP A++VL HPFFW+ + +L F +DVSDR+E E
Sbjct: 795 LH--PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKE 852
Query: 818 DRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNH 877
D +++ LE + W E + ++ ++R YK +VRDLLR +RNK +H
Sbjct: 853 SL--DGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKKHH 910
Query: 878 FRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+RELP +++E LGS P+ F YF+ RFP LL Y + C E +F Y
Sbjct: 911 YRELPAEVRETLGSLPDDFVCYFTSRFPHLLAHTYRAM-ELCSHERLFQPY 960
|
Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices XBP1 mRNA to generate a new C-terminus, converting it into a potent unfolded-protein response transcriptional activator and triggering growth arrest and apoptosis. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 6 EC: . EC: - |
| >sp|Q55DJ9|IRLD_DICDI Probable serine/threonine-protein kinase irlD OS=Dictyostelium discoideum GN=irlD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 225/497 (45%), Gaps = 114/497 (22%)
Query: 471 IGKLVVFNKE---IAKGSNGTVVLEGNYEGR-SVAVKRLVKTHHDVALKEIQNLIA--SD 524
IGK K+ I +GSNGT+V +G + R VA+K++ K + + KEI+ LI +
Sbjct: 1047 IGKFKFSRKDEFIIGRGSNGTLVFKGIWNDRIPVAIKQMHKAFNPLISKEIEVLITLTNK 1106
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
NIVR+ E D FVYL L C SL +L+ K+ + NL++
Sbjct: 1107 NCNNIVRYIDQEEDDMFVYLGLTLCNGSLQNLV------------EKDLEINLISTSNNE 1154
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+ I +LL++ +DIV G+ LH+ G++H DL P+N+LI D+
Sbjct: 1155 NNNNNKLKNFI-------GSELRLLELIKDIVYGIQFLHQQGIVHNDLNPRNILIKDDRF 1207
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
+SD+G+SK T +A
Sbjct: 1208 I---ISDLGLSKMEVTSSYSFTMHAPT--------------------------------- 1231
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
G G+ E LL+ R+T+++D+FS+GCILF+ +TGG+HP+G+ F R ANI+ D+ L +
Sbjct: 1232 GQEGFHPAEVLLEKRKTKSVDIFSMGCILFYLMTGGQHPFGDKFFRMANILTDKPILEPL 1291
Query: 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSK 824
+H A DL ++++ N RP +N+L HPFFW + ++ F+ + + + SK
Sbjct: 1292 KHNLVACDLISQMISKNESDRPTTENILLHPFFWNHEKKVKFIDASLNLFKDSNGLFTSK 1351
Query: 825 LLRAL------EGIALVA---LNGKWDEKMETKFIENIG--------------------- 854
L + + +G+ + L+ W++ ++ IE+I
Sbjct: 1352 LNKLINQFQDTDGVNTTSTPFLSKPWNQLIDPTLIEHITNKQNQLSGGSSIGNNNNNSLT 1411
Query: 855 ----RYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHP---------------EG 895
++ Y Y V+DL+R IRN H +E IQ L+ P E
Sbjct: 1412 LSGKKFYFYDYSQVKDLVRCIRNTIQHHKE----IQRLISQSPSSSNKQEVLDCLESQEL 1467
Query: 896 FYNYFSCRFPKLLIEVY 912
+YF + P LL+ +Y
Sbjct: 1468 VLSYFEEKVPDLLLFLY 1484
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase irlC OS=Dictyostelium discoideum GN=irlC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 230/511 (45%), Gaps = 130/511 (25%)
Query: 471 IGKLVVFNKE---IAKGSNGTVVLEGNYEGR-SVAVKRLVKTHHDVALKEIQNLIA--SD 524
IGK KE + +GSNGT+V +G + R VA+K++ K + + KEI+ LI +
Sbjct: 974 IGKFKFNRKEENVLGRGSNGTLVFKGIWNNRIPVAIKQMQKMFNPLISKEIEVLITLTNK 1033
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
NIVR+ E D+ VYL L C SL +L+ E+ N L +
Sbjct: 1034 NCYNIVRYIDQEEDESCVYLGLTLCDGSLQNLV--------------EKGDNNLTLTQFL 1079
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+ ++K+ +++LL++ +DIV G+ LH+ G++H DL P+N+LI D+
Sbjct: 1080 GYDINSSSKN----------NSRLLELIKDIVYGIQFLHQQGIVHNDLNPRNILIKDDRF 1129
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
+SD+G+SK T +A
Sbjct: 1130 I---ISDLGLSKMEVTSSYSFTMHAPT--------------------------------- 1153
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
G G+ E LL+ R+T+++D+FS+GCILF+ +TGG+HP+G+ F R NI+ D+ L +
Sbjct: 1154 GQEGFHPAEVLLEKRKTKSVDIFSMGCILFYLMTGGQHPFGDKFYRIVNILTDKPILEPL 1213
Query: 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSK 824
+H A DL ++++ N RP + +L HPFFW + ++ F+ + + + SK
Sbjct: 1214 KHNLVACDLISQMISKNESDRPTIEKILLHPFFWNHEKKVKFIDASLNLFKDSNGLFTSK 1273
Query: 825 LLRALE----------------------------------GIA--LVALNGKWDEKMETK 848
L + + G+A + L+ W++ ++
Sbjct: 1274 LNKLINYQEINLKNNIDSSSSNNNNNINSNVINNNNNNNNGMATNIPFLSKPWNQLIDQT 1333
Query: 849 FIENI----------GRYRR---YKYDNVRDLLRVIRNKSNHFREL-------------- 881
IE+I G ++ Y +D V+DL+R IRN H +E+
Sbjct: 1334 LIEHIINKQNQLNGVGNNKKVIIYSFDQVKDLVRCIRNTIQHHKEIQRLVRQSPSSNGDN 1393
Query: 882 PQDIQELLGSHPEGFYNYFSCRFPKLLIEVY 912
Q++ + L S E +YF + P LL+ +Y
Sbjct: 1394 KQEVLDCLESQ-ELVLSYFEEKVPDLLLFLY 1423
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 934 | ||||||
| 225457602 | 925 | PREDICTED: uncharacterized protein LOC10 | 0.929 | 0.938 | 0.513 | 0.0 | |
| 297745578 | 827 | unnamed protein product [Vitis vinifera] | 0.868 | 0.980 | 0.509 | 0.0 | |
| 225438442 | 957 | PREDICTED: uncharacterized protein LOC10 | 0.926 | 0.903 | 0.485 | 0.0 | |
| 224086074 | 496 | predicted protein [Populus trichocarpa] | 0.528 | 0.995 | 0.684 | 0.0 | |
| 224074275 | 822 | predicted protein [Populus trichocarpa] | 0.858 | 0.975 | 0.482 | 0.0 | |
| 10177897 | 939 | unnamed protein product [Arabidopsis tha | 0.871 | 0.866 | 0.460 | 0.0 | |
| 255561453 | 911 | kinase, putative [Ricinus communis] gi|2 | 0.886 | 0.908 | 0.470 | 0.0 | |
| 356495301 | 895 | PREDICTED: uncharacterized protein LOC10 | 0.874 | 0.912 | 0.480 | 0.0 | |
| 297808453 | 871 | hypothetical protein ARALYDRAFT_489300 [ | 0.851 | 0.912 | 0.452 | 0.0 | |
| 334187908 | 867 | protein inositol requiring 1-1 [Arabidop | 0.873 | 0.941 | 0.459 | 0.0 |
| >gi|225457602|ref|XP_002272934.1| PREDICTED: uncharacterized protein LOC100247854 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/981 (51%), Positives = 642/981 (65%), Gaps = 113/981 (11%)
Query: 1 MRRALVFLLLSTAIIQSVSSSELSATPPNRYVSEIY-----NSLLPPPLPPEPDVALVAA 55
M+R+L+FLL +I ++ S T S+ + NS++P P+ D+ALVAA
Sbjct: 1 MKRSLIFLLWFISISGVLAISTKPETSLLNLDSKGFDILKANSIVPQA--PKNDIALVAA 58
Query: 56 LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSN-----ASEFYLDVDEDWELYFHSK 110
LDGTI+LV+ KI WSF +G IYSSYQA + + +++F++D +DWELY H+
Sbjct: 59 LDGTIYLVEASSRKILWSFASGSSIYSSYQAFLDGDNDKQLSTDFFIDCGDDWELYRHNI 118
Query: 111 RFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTP 170
FGK +KL + E+Y+ PY+SKDG VT+G+ KT+VFLVD KSG +++ + D S
Sbjct: 119 SFGKREKLLLTPEKYVEGAPYVSKDG-VTVGSKKTTVFLVDAKSGTIINTFRSDASPLIG 177
Query: 171 GFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230
GFQSDE ++ + EEL+E G +L+++ +YIMRTDYVLQ S SG+VLWNV +A
Sbjct: 178 GFQSDEENPILSREEIEELIEPGDVDLQKVELPLYIMRTDYVLQHFSPTSGKVLWNVKFA 237
Query: 231 DFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDNSL---- 286
D +A F+C G+E+G + + D+ES P H Q ASVYR+R+ SL
Sbjct: 238 DIEAVFQC-------------PGTEIGSEYMSDIES--PLHCQTRASVYRIREPSLLDSF 282
Query: 287 ------PEFLSVIGKVA----------------------------GWISLPGSSQNSLLG 312
P+ L + ++ +SLP S SL
Sbjct: 283 PMHDRLPKTLPAVEVLSLPASEPKSHSLLDSFPMHDRLPKALPAVEVLSLPASEPKSLSQ 342
Query: 313 PVDR-NSPLFLPDKVDRPPLALPSTETEIPWTLGMPGGSVSEINKKHAFVEGFRSYIQSF 371
PV R P L +P LALP +E TL + GG SE++ + I+
Sbjct: 343 PVGRLPGPHHLGQ--GKPLLALPLSEG----TLSVHGGDASEMD----IMSIVSDNIEKL 392
Query: 372 IVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKT-GI-PKKKKSRRPGYNRNTTNSEKMQ 429
+ L I+GF+ Y V+ ++ +K GI PKKKK+R+ N+N ++EK
Sbjct: 393 GIWAAPLLFIVGFIIYQFFAVREPGKSRPKDSKVQGISPKKKKARKSVINKNNASNEKRH 452
Query: 430 NIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTV 489
I +ESKV + +GLS + N K L L D V R+IGK++V KEIAKGSNGT+
Sbjct: 453 GNISHESKVADNNGLSQVERNEIKLELNSNSLADVHVGERKIGKMLVSKKEIAKGSNGTI 512
Query: 490 VLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
VLEG Y+GR VAVKRLV+THHDVALKEIQNLIASDQHPNIVRW+GVE DQDFVYLSLERC
Sbjct: 513 VLEGIYDGRPVAVKRLVRTHHDVALKEIQNLIASDQHPNIVRWHGVEYDQDFVYLSLERC 572
Query: 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
CSL+DLIY+ S S ++QL ++ DSN+LNE +RL +M+ KD ELWK NG+PS QLL
Sbjct: 573 NCSLSDLIYLCSDS-QDQLVNQDWDSNILNEYIVRLHSIMDPNKDFELWKTNGYPSPQLL 631
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQN 668
K+ RD+VSGL+HLHE+G+IHRDLKPQN+LI K KS AKLSDMGISKRL GDMS LT +
Sbjct: 632 KLMRDVVSGLAHLHELGIIHRDLKPQNILIIIKGKSLSAKLSDMGISKRLLGDMSSLTHH 691
Query: 669 ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFS 728
TG YGSSGWQAPEQL GRQTRA+DLFS
Sbjct: 692 GTG--------------------------------YGSSGWQAPEQLRHGRQTRAVDLFS 719
Query: 729 LGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788
LGC+LFFC+TGGKHPYG++ ERD NIV +RKDLFL+E+IPEAVDLF+ LL+P+PDLRPKA
Sbjct: 720 LGCVLFFCLTGGKHPYGDNLERDVNIVNNRKDLFLIENIPEAVDLFSLLLEPDPDLRPKA 779
Query: 789 QNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETK 848
+VL+HPFFW+++ RLSFLRDVSDRVELEDRE++S+LL+ LE I +ALNGKWDEKME
Sbjct: 780 MDVLHHPFFWSSEMRLSFLRDVSDRVELEDRENESQLLKQLESIGTLALNGKWDEKMEGA 839
Query: 849 FIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLL 908
FI NIGRYRRYK+D+VRDLLRVIRNK NH+RELP DIQE+LG PEGF YFS RFP+ L
Sbjct: 840 FINNIGRYRRYKFDSVRDLLRVIRNKLNHYRELPSDIQEILGPVPEGFNLYFSSRFPRFL 899
Query: 909 IEVYNVIFTYCKGEEVFHKYV 929
IEVY VI T+C+ EE F KY+
Sbjct: 900 IEVYKVIHTHCREEEFFQKYI 920
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745578|emb|CBI40743.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/940 (50%), Positives = 609/940 (64%), Gaps = 129/940 (13%)
Query: 1 MRRALVFLL--LSTAIIQSVSSS-ELSATPPNRYVSEIYNSLLPPPLPPEPDVALVAALD 57
M+R+L+FLL +S + + ++S+ E S + +I + P P+ D+ALVAALD
Sbjct: 1 MKRSLIFLLWFISISGVLAISTKPETSLLNLDSKGFDILKANSIVPQAPKNDIALVAALD 60
Query: 58 GTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSN-----ASEFYLDVDEDWELYFHSKRF 112
GTI+LV+ KI WSF +G IYSSYQA + + +++F++D +DWELY H+ F
Sbjct: 61 GTIYLVEASSRKILWSFASGSSIYSSYQAFLDGDNDKQLSTDFFIDCGDDWELYRHNISF 120
Query: 113 GKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGF 172
GK +KL + E+Y+ PY+SKDG VT+G+ KT+VFLVD KSG +++ + D S GF
Sbjct: 121 GKREKLLLTPEKYVEGAPYVSKDG-VTVGSKKTTVFLVDAKSGTIINTFRSDASPLIGGF 179
Query: 173 QSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADF 232
QSDE ++ + EEL+E G +L+++ +YIMRTDYVLQ S SG+VLWNV +AD
Sbjct: 180 QSDEENPILSREEIEELIEPGDVDLQKVELPLYIMRTDYVLQHFSPTSGKVLWNVKFADI 239
Query: 233 KAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDNSLPEFLSV 292
+A F+C G+E+G + + D+ES L C T+ S
Sbjct: 240 EAVFQC-------------PGTEIGSEYMSDIESPLHCQTRA----------------SP 270
Query: 293 IGKVAGWISLPGSSQNSLLGPVDRNSPLFLPDKVDRPPLALPSTETEIPWTLGMPGGSVS 352
+G+ LPG LG +P LALP +E TL + GG S
Sbjct: 271 VGR------LPGPHH---LGQ-------------GKPLLALPLSEG----TLSVHGGDAS 304
Query: 353 EINKKHAFVEGFRSYIQSFIVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKT-GI-PKK 410
E++ + I+ + L I+GF+ Y V+ ++ +K GI PKK
Sbjct: 305 EMD----IMSIVSDNIEKLGIWAAPLLFIVGFIIYQFFAVREPGKSRPKDSKVQGISPKK 360
Query: 411 KKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRR 470
KK+R+ N+N ++EK I +ESKV + +GLS + N K L L D V R+
Sbjct: 361 KKARKSVINKNNASNEKRHGNISHESKVADNNGLSQVERNEIKLELNSNSLADVHVGERK 420
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
IGK++V KEIAKGSNGT+VLEG Y+GR VAVKRLV+THHDVALKEIQNLIASDQHPNIV
Sbjct: 421 IGKMLVSKKEIAKGSNGTIVLEGIYDGRPVAVKRLVRTHHDVALKEIQNLIASDQHPNIV 480
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
RW+GVE DQDFVYLSLERC CSL+DLIY+ S S ++QL
Sbjct: 481 RWHGVEYDQDFVYLSLERCNCSLSDLIYLCSDS-QDQL---------------------- 517
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKL 649
D ELWK NG+PS QLLK+ RD+VSGL+HLHE+G+IHRDLKPQN+LI K KS AKL
Sbjct: 518 ---DFELWKTNGYPSPQLLKLMRDVVSGLAHLHELGIIHRDLKPQNILIIIKGKSLSAKL 574
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
SDMGISKRL GDMS LT + TG YGSSGW
Sbjct: 575 SDMGISKRLLGDMSSLTHHGTG--------------------------------YGSSGW 602
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE 769
QAPEQL GRQTRA+DLFSLGC+LFFC+TGGKHPYG++ ERD NIV +RKDLFL+E+IPE
Sbjct: 603 QAPEQLRHGRQTRAVDLFSLGCVLFFCLTGGKHPYGDNLERDVNIVNNRKDLFLIENIPE 662
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRAL 829
AVDLF+ LL+P+PDLRPKA +VL+HPFFW+++ RLSFLRDVSDRVELEDRE++S+LL+ L
Sbjct: 663 AVDLFSLLLEPDPDLRPKAMDVLHHPFFWSSEMRLSFLRDVSDRVELEDRENESQLLKQL 722
Query: 830 EGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELL 889
E I +ALNGKWDEKME FI NIGRYRRYK+D+VRDLLRVIRNK NH+RELP DIQE+L
Sbjct: 723 ESIGTLALNGKWDEKMEGAFINNIGRYRRYKFDSVRDLLRVIRNKLNHYRELPSDIQEIL 782
Query: 890 GSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 929
G PEGF YFS RFP+ LIEVY VI T+C+ EE F KY+
Sbjct: 783 GPVPEGFNLYFSSRFPRFLIEVYKVIHTHCREEEFFQKYI 822
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438442|ref|XP_002275036.1| PREDICTED: uncharacterized protein LOC100249111 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/968 (48%), Positives = 601/968 (62%), Gaps = 103/968 (10%)
Query: 2 RRALVFLLLSTAIIQSVSSSELSATPPNRYV-SEIYNSLLPPPLPPEPDVALVAALDGTI 60
RR+L+ ++ +SV S TP YV I N L + D ALVAAL+GTI
Sbjct: 48 RRSLL------SLPKSVDSPIFLDTPSTVYVLYSICNVLNHGKFLSKNDTALVAALNGTI 101
Query: 61 HLVDTKLGKIRWSFGTGRPIYSSYQASFNSN-----ASEFYLDVDEDWELYFHSKRFGKM 115
HLV++ K+ WSF +G IYSSYQA + + S F++D EDWELY H + FGK+
Sbjct: 102 HLVESNSMKVLWSFTSGPSIYSSYQAPLDQDNATDWGSGFFVDCGEDWELYMHGRHFGKV 161
Query: 116 KKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSD 175
K L +AEE+I P++S+DGGV LG+ +T+VFL++ K+G+++ +Y S TP S+
Sbjct: 162 K-LPMTAEEFISSTPHVSEDGGVILGSKQTTVFLLNAKTGKLIHSYRSLESPPTP--LSN 218
Query: 176 ENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAE 235
+ + VV EE V+SG NL + +YI RTDY LQS +Q S +VLWN+ A+ A
Sbjct: 219 KEESVVHDKDIEEWVDSGSTNLNIVEPRLYITRTDYSLQSFAQGSDKVLWNMTVAEIGAA 278
Query: 236 FRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRLRDNSLPE------F 289
F CQ FS N G ELG + D E LPC Q A VYR R +++ E
Sbjct: 279 FLCQGTENLFSRPPLNLGCELGPEYNCDFEMPLPC--QSKAVVYRYRGHTMLEPFPRHDR 336
Query: 290 LSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLPDKVDRPPLALPS-------------T 336
L + + P + P D P +P+ + LPS
Sbjct: 337 LQEAHQEDRLLLQPNIDKTLDFHPQDMMLPAVVPNHM------LPSEPKDEISLNFQDNN 390
Query: 337 ETEIPWTLGMP---GGSVSEINKKHAFVEGFR-----SYIQSFIVLFIAL--------CP 380
++E L P +S+ N + + +G S + S IV + L P
Sbjct: 391 DSEAVLPLSPPKIKNSGISDQNVQMPYNDGLSMFSGGSILFSLIVFIVILLVSVIYCCTP 450
Query: 381 IIGFLFYHSKQVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGE 440
+ G +KQ N +P KK+ R N ++ +K ++++ +E+K
Sbjct: 451 VAGEQGEMNKQPNDSDSN-------SVPSKKRKIRKSAKNNISSGKKDEHVL-SENK--- 499
Query: 441 TDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSV 500
DG +HI + +L L+D +GR +GKL V N IAKGSNGT+VLEG +EGRSV
Sbjct: 500 -DGSAHIASDNSPWL-NLNGLVDGDTNGRIVGKLFVSNIVIAKGSNGTIVLEGIHEGRSV 557
Query: 501 AVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVL 560
AVKRLV+ HHDVA KEIQNLIASD+HPNIVRWYGVE DQDFVYLSLERCTCSLNDL+ +
Sbjct: 558 AVKRLVRAHHDVAFKEIQNLIASDRHPNIVRWYGVEYDQDFVYLSLERCTCSLNDLLQIH 617
Query: 561 SGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620
S S + + +Q + + E RI+L V +DI+LWK+NG+PS+ LL + RD+VSGL
Sbjct: 618 SNSSQNPGFSMDQATKAMMEYRIQLDSVKCIVQDIKLWKSNGYPSSVLLSLMRDVVSGLV 677
Query: 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680
HLH++G+IHRDLKPQNVLI K+KS CAKLSDMGISKRL GDMS L +ATG
Sbjct: 678 HLHDLGIIHRDLKPQNVLIIKEKSLCAKLSDMGISKRLVGDMSSLGHHATG--------- 728
Query: 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 740
YGSSGWQAPEQLL GRQTRA+DLFSLGCILF CITGG
Sbjct: 729 -----------------------YGSSGWQAPEQLLHGRQTRAVDLFSLGCILFSCITGG 765
Query: 741 KHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800
+HP+G+ ERD NIVK++ DLFLVE IPEA+DLF RLLDP P+LRPKA VL HP FW++
Sbjct: 766 RHPFGDPLERDVNIVKNKPDLFLVEFIPEALDLFARLLDPKPELRPKASEVLYHPLFWSS 825
Query: 801 DTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYK 860
+ RLSFLRD SDRVELEDRES+S +L+ALEG A AL GKW+EKME F+ +IGRYRRYK
Sbjct: 826 ELRLSFLRDASDRVELEDRESNSHVLKALEGTAPTALGGKWNEKMEPAFLADIGRYRRYK 885
Query: 861 YDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCK 920
+D+VRDLLRVIRNK NH+RELP++IQE+LGS PEGF +YFS RFP+LLIEVY V+ +CK
Sbjct: 886 FDSVRDLLRVIRNKWNHYRELPREIQEILGSVPEGFDSYFSSRFPRLLIEVYKVVSRHCK 945
Query: 921 GEEVFHKY 928
GEE F KY
Sbjct: 946 GEECFQKY 953
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224086074|ref|XP_002307805.1| predicted protein [Populus trichocarpa] gi|222857254|gb|EEE94801.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/526 (68%), Positives = 424/526 (80%), Gaps = 32/526 (6%)
Query: 407 IPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRV 466
+PKKKK+RR G N++ N+ K Q + +SKVGE + L+ + + K LLTFTD +D RV
Sbjct: 1 MPKKKKNRRSGNNKSNPNNLKNQKYLSLQSKVGEINELTRVERDERKLLLTFTDHVDGRV 60
Query: 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQH 526
DGRRIGKL+V NKEIAKGSNGTVVLEG Y+GR VAVKRLV++HHDVALKEIQNLIASDQH
Sbjct: 61 DGRRIGKLLVSNKEIAKGSNGTVVLEGIYDGRHVAVKRLVQSHHDVALKEIQNLIASDQH 120
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
PNIVRWYGVE DQDFVYL+LERCTCSLNDLIYV S SF+ Q+ +K+ DSN L E +RL
Sbjct: 121 PNIVRWYGVEYDQDFVYLALERCTCSLNDLIYVNSESFQNQIPSKDMDSNRLPEYMVRLH 180
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
+ E+ +++ELWKANG+PS QLLK+ RD+VSGL+HLHE+G++HRD+KPQNVLI +KSFC
Sbjct: 181 SMPEHNRNVELWKANGYPSVQLLKLMRDVVSGLAHLHELGIVHRDMKPQNVLIISEKSFC 240
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
AKLSDMGISKRL GDMS LTQ+ TG YGS
Sbjct: 241 AKLSDMGISKRLLGDMSSLTQHPTG--------------------------------YGS 268
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH 766
SGWQAPEQLL GRQTRA+DLFSLGC+LFFCITGGKHP+G++ ERD NIV DRKDLFLVE+
Sbjct: 269 SGWQAPEQLLHGRQTRALDLFSLGCVLFFCITGGKHPFGDNIERDVNIVNDRKDLFLVEN 328
Query: 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLL 826
IPEA+DLFT LLDP+P+ RPKAQ VLNHP FWT++ RLSFL+DVSDRVELEDRE+ S+LL
Sbjct: 329 IPEALDLFTCLLDPDPEKRPKAQEVLNHPLFWTSEKRLSFLQDVSDRVELEDRENASELL 388
Query: 827 RALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQ 886
LE A +ALNGKWDEKME FI NIGRYRRYK+D++RDLLRVIRNKS+H+RELPQ+I+
Sbjct: 389 DTLESTATMALNGKWDEKMEAAFINNIGRYRRYKFDSIRDLLRVIRNKSHHYRELPQEIK 448
Query: 887 ELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
ELLGSHPEGF +YFS RFPKLLIEVY VI+ YCK EE F KY+ ++
Sbjct: 449 ELLGSHPEGFESYFSRRFPKLLIEVYKVIYRYCKEEEFFRKYIDSN 494
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224074275|ref|XP_002304333.1| predicted protein [Populus trichocarpa] gi|222841765|gb|EEE79312.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/900 (48%), Positives = 567/900 (63%), Gaps = 98/900 (10%)
Query: 52 LVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASE---------FYLDVDED 102
LVA L+GTI+ D GKI WSF +G P YSSYQA ++ + F+LD +D
Sbjct: 1 LVALLNGTIYFKDKISGKILWSFSSGGPTYSSYQAPAKHDSDKEKGPGGLTGFFLDYGDD 60
Query: 103 WELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY- 161
W+LY H K G MK L + E++I+ P++S+DG V LG+ KT+VF+V+ K+GR++ +
Sbjct: 61 WQLYAHYKYSGGMK-LPMNIEDFIKITPHMSEDGAVMLGSKKTTVFVVEAKTGRLIRTFK 119
Query: 162 VLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSG 221
D +S F+ H ++ ++L++SG N Q++YI+RTDY LQ+ +S
Sbjct: 120 SPDSPSSLQSFEEGSGLHD-DLNNNKDLLKSGSSN---TAQVIYILRTDYALQTFGPNSD 175
Query: 222 EVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTASVYRL 281
+V W+ A A F C++V + SE+ +L +++S P Q V +
Sbjct: 176 KVSWSTKVATIGATFLCKDV---------ENPSEV-FNLSFELDSDTPLSCQSRRIVVQR 225
Query: 282 RDNSLPEFLSVIGKVAGWISLPGSSQNSLLGP---VDRNSPLFLPDKVDRPPLALPSTET 338
+D S ++ S G + G LP S+ N +L V+++ L D R LA PS
Sbjct: 226 QDKS--QYSS--GDIHGEDKLPLSAPNLMLTTQPGVEKS----LDDHHARMLLAAPSEHG 277
Query: 339 EIPWTLGMPGGSVS-EINKKHAFVEGFRSYIQSFIVLFIALCPIIGFLFYHSKQVKSKKQ 397
+ L +P S + E++ + + + S QSFI LF+ + ++ F+ Y SK+ +
Sbjct: 278 K--EMLALPSASAAGEVHYRFGMLLMW-STTQSFI-LFVGIL-LLCFVLYLSKESFTL-- 330
Query: 398 NEEHITKTGIPKKKKSRR----PGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEK 453
E +T TG+ ++ PG +N + E I P E K
Sbjct: 331 -EGQLTGTGLKASSSKKKKAKKPG--KNNVSVENGNEIAPGEGV--------------NK 373
Query: 454 FLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA 513
L L+D +GRRIGKL V N EIAKGSNGTVVLEG YEGR VAVKRLV+THHDVA
Sbjct: 374 TLSDLNKLVDGGANGRRIGKLFVSNTEIAKGSNGTVVLEGVYEGRLVAVKRLVQTHHDVA 433
Query: 514 LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQ 573
KEIQNLIASD+HPNIVRWYGVE D+DFVYLSLERCTCSL+DLI + S S + K++
Sbjct: 434 WKEIQNLIASDRHPNIVRWYGVEYDEDFVYLSLERCTCSLDDLIQIYSDSSLNPVYGKDR 493
Query: 574 DSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633
S E ++RL V +D+ LWKA GHPS LL + RD+VSGL HLHE+G+IHRDLK
Sbjct: 494 TSRAAIEHKLRLDSVKGVMQDLNLWKATGHPSPLLLTLMRDMVSGLVHLHELGIIHRDLK 553
Query: 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693
PQNVLI K++S CAKLSDMGISKRL GDMS L +ATG
Sbjct: 554 PQNVLIIKERSLCAKLSDMGISKRLLGDMSSLAYHATGS--------------------- 592
Query: 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN 753
GSSGWQAPEQL R+TRA+DLFSLGC+LF+CITGG+HP+G+ ERD N
Sbjct: 593 -----------GSSGWQAPEQLHHRRETRAVDLFSLGCVLFYCITGGRHPFGDHLERDVN 641
Query: 754 IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
IVK++KDLFLVE+IPEA DL +RLL+P+P+LRPKA VL+HP FW ++ RLSFLRD SDR
Sbjct: 642 IVKNQKDLFLVEYIPEAEDLISRLLNPDPELRPKALEVLHHPMFWNSELRLSFLRDTSDR 701
Query: 814 VELEDRESDSKLLRALEGIALVAL-NGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIR 872
VELEDR SDS +L+ALEGIA AL GKW+EKME FI +IGR+RRYK+D +RDLLRVIR
Sbjct: 702 VELEDRVSDSDILKALEGIAPTALGGGKWNEKMEPAFITDIGRHRRYKFDGIRDLLRVIR 761
Query: 873 NKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
NK NH+RELP +IQEL+G PEG+ NYF+ RFPKLLIEVY V+ YC+ EE F KY+ ++
Sbjct: 762 NKLNHYRELPNEIQELVGPVPEGYDNYFASRFPKLLIEVYKVVRKYCREEEWFQKYIKSN 821
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|10177897|dbj|BAB11229.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/897 (46%), Positives = 536/897 (59%), Gaps = 83/897 (9%)
Query: 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASE----------FY 96
E LV+ +DG+I LVD K+ W+F T PIYSSYQA ++ FY
Sbjct: 105 ESGYVLVSTVDGSISLVDMSSQKLDWTFHTNEPIYSSYQAPHYHYTTDEERSSVLGDDFY 164
Query: 97 LDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGR 156
+D D+DW LY S R GK A E+I +PY S D + LG TSVFL+D K+G+
Sbjct: 165 MDCDKDWRLYNSSVRKGKRVNEIVDASEFIGTLPYTSTDR-IVLGKKDTSVFLLDWKTGK 223
Query: 157 VVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQST 216
+V Y +D S ++D+ K +V L SG + +LVYI R D+ +Q
Sbjct: 224 LVKRYRMDELYSNTVVENDKEKAIVLSKEAPLLFGSGFKKSEDFPELVYIERKDFKIQCI 283
Query: 217 SQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTA 276
S+ G+VLW+V+YA +A+ + E + SG + G ++ P +
Sbjct: 284 SK-FGDVLWSVSYAKMEAKLQNHESVQFISGLSSSVG-----------KNQFPLSYTTSV 331
Query: 277 SVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLP-DKVDRPPLALPS 335
+ +LR+ +G + + LP + + + L LP +K L+LP
Sbjct: 332 PMVQLRNVKYETLFPRLGFLDEALYLPFQDRKPNQLAIGDGNQLTLPGNKEAEEVLSLPL 391
Query: 336 TETEIPWTLGMPGGSVSEINKKHAFVEGFRSYIQSFIVLFIALC----PIIGFLFYHSKQ 391
ET I + GS + GF S IVL C + G FY +Q
Sbjct: 392 PETVISQITDIIDGSTKQ--------AGFASKFSGLIVLIFGFCVTMLSVCGLFFYRLRQ 443
Query: 392 VKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNG 451
S + E ++++ I KK + +K I G SH N
Sbjct: 444 --SIRIKEPYVSEVPIATPKKKKSKKNGTTKAVHKKENGFIS-----GGNKDPSH-EENE 495
Query: 452 EKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD 511
++ L F L + +G R+GKL V NKEIAKGSNGTVVLEG+YEGR VAVKRLV++HHD
Sbjct: 496 KRLLTAFPGLNNSSAEGYRVGKLFVSNKEIAKGSNGTVVLEGSYEGRLVAVKRLVQSHHD 555
Query: 512 VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAK 571
VA KEI NL+ASD+H NIVRWYGV+ D+ F+Y+SLE C CSLNDLIY S E + +
Sbjct: 556 VAQKEILNLMASDKHSNIVRWYGVDQDEHFIYISLELCACSLNDLIYASSALLESPMASS 615
Query: 572 EQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631
S I++ P+ EN K +ELWK NGHPS LLK+ RDIV+GL HLH+IG++HRD
Sbjct: 616 SIHS-------IQINPIFENGKGVELWKENGHPSPVLLKLMRDIVAGLVHLHDIGIVHRD 668
Query: 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691
LKPQNVLI K+ S CAKLSDMGISKRL D S LT+N+TG
Sbjct: 669 LKPQNVLIVKNSSLCAKLSDMGISKRLPADTSALTRNSTGS------------------- 709
Query: 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
GSSGWQAPEQL RQTRA+DLFSLGC+LFFC+TGGKHPYG+++ERD
Sbjct: 710 -------------GSSGWQAPEQLRNERQTRAVDLFSLGCVLFFCMTGGKHPYGDNYERD 756
Query: 752 ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVS 811
N++ D+KDLFL+E +PEAV L T LL+P+P+LRP+AQ+V++HP FW +D RLSFLRD S
Sbjct: 757 VNVLNDQKDLFLIESLPEAVHLLTGLLNPDPNLRPRAQDVMHHPLFWNSDMRLSFLRDAS 816
Query: 812 DRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVI 871
DRVELE+RE S+LL ALE A V LNG+WDEK+++ F++NIGRYRRYK+D++RDLLRVI
Sbjct: 817 DRVELENREEGSQLLAALESTAAVTLNGRWDEKLDSIFLDNIGRYRRYKFDSIRDLLRVI 876
Query: 872 RNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
RNK NH+RELP+++QELLGS PEGF YFS RFPKLLI+VY V+F YC EE F KY
Sbjct: 877 RNKLNHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 933
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561453|ref|XP_002521737.1| kinase, putative [Ricinus communis] gi|223539128|gb|EEF40724.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/899 (47%), Positives = 559/899 (62%), Gaps = 71/899 (7%)
Query: 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSN---------ASEFYL 97
E LVA L+GTI+ +T ++ WSF +G PIYSSYQASFN + ++ F++
Sbjct: 61 EDSTELVALLNGTIYFQETNSERVFWSFSSGAPIYSSYQASFNQDNDGENEFGPSTGFFI 120
Query: 98 DVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRV 157
D +DW+LY H K MK LS + E+++ P++S+DG V LG+ T+VF+V+ K+GR+
Sbjct: 121 DYGDDWQLYAHGKHSSGMK-LSMNIEDFMIITPHVSEDGAVILGSKITTVFVVEAKTGRL 179
Query: 158 VDNY-VLDFSASTPGFQSDENKHV-VPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQS 215
V Y LD +S Q DE + + + +L+ + + QL+YI RTDY LQ+
Sbjct: 180 VQTYKSLDPPSS---LQRDEEGNAFLNENRNNDLI---ISDSATSAQLIYITRTDYTLQN 233
Query: 216 TSQDSGEVLWNVAYADFKAEFRCQEV-GKSFSGYHFNSGSELGMDLIGDVESHLPCHTQM 274
+S ++ WN+ A +A F C++V G+S + S ++ + + ++
Sbjct: 234 FGPNSDKISWNMKVAMIEAAFLCKDVEGRSNFDMPLSCQSR---RMVVRRQGNPQSSSEA 290
Query: 275 TASVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLPDKVDRPPLALP 334
T L +L L +V SL + +L + L L KVD P P
Sbjct: 291 THGDEMLPVPALDLVLPSQPRVGK--SLQDHHEGRMLSGSASDFVLPLQSKVDELPTFHP 348
Query: 335 STETEIPWTLGMPGGSVSEINKKHAFVEGF-----RSYIQSFIVLFIALCPIIGFLFYHS 389
+ ++E L N + AF + RS SF +F + ++GF FY S
Sbjct: 349 TDDSEGMLALPNDSEGFDAHNARVAFDDWLNILIKRSTTLSF--MFFIVIILLGFNFYPS 406
Query: 390 KQVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITG 449
V K E ++ K S+R ++ + K +P E+ G T ++
Sbjct: 407 NLVGKSKVASEGLSSDSSSKASSSKRKKSRKSGKKNGK---DVPFENDDGPT-----LSD 458
Query: 450 NGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH 509
+ +K LL +D V+GRRIGKL V N EIAKGSNGT+VLEG YEGR VAVKRLV+ H
Sbjct: 459 SSDKKLLDLNKHVDRGVNGRRIGKLFVSNAEIAKGSNGTIVLEGIYEGRPVAVKRLVQAH 518
Query: 510 HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLN 569
H+VA KEIQNLIASD+HPNIVRWYGVE+D DFVYLSLERCTCSL+DLI + S Q+
Sbjct: 519 HEVAFKEIQNLIASDRHPNIVRWYGVENDNDFVYLSLERCTCSLDDLIQIYCDSSFNQVF 578
Query: 570 AKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629
+++Q + + ++RL V +D+ LWK+NGHPS +L + RD+V GL HLHE+G+IH
Sbjct: 579 SEDQATRVATNYKLRLNKVKGILQDLNLWKSNGHPSPLMLLLMRDVVCGLVHLHELGIIH 638
Query: 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689
RDLKPQNVLI K++S AKLSDMGISKRL GDMS L +ATG
Sbjct: 639 RDLKPQNVLILKERSLSAKLSDMGISKRLLGDMSSLGYHATG------------------ 680
Query: 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE 749
C GSSGWQAPE LLQGRQTRA+DLFSLGC+LFFCITGG+HP+G+ E
Sbjct: 681 -C-------------GSSGWQAPELLLQGRQTRAVDLFSLGCVLFFCITGGRHPFGDRLE 726
Query: 750 RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRD 809
RD NIVK++ DLFLVE+ PEA DL +RLL+ +P+LRPKA VL+HP FW+++ RLSFLR+
Sbjct: 727 RDVNIVKNKMDLFLVEYFPEAGDLISRLLNHDPELRPKALEVLHHPMFWSSEMRLSFLRE 786
Query: 810 VSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLR 869
SDRVELEDRES S LL+ALE IA AL GKWDEKME FI NIG YRRYKYD+VRDLLR
Sbjct: 787 TSDRVELEDRESGSVLLKALESIASTALGGKWDEKMEPAFITNIGHYRRYKYDSVRDLLR 846
Query: 870 VIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
V+RNK NH+RELP++IQEL+G PEG+ YF+ RFPKLLIEVY V++ +C+ E+ FHKY
Sbjct: 847 VLRNKLNHYRELPKEIQELVGPIPEGYDGYFASRFPKLLIEVYKVVYRFCREEDCFHKY 905
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356495301|ref|XP_003516517.1| PREDICTED: uncharacterized protein LOC100785363 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/924 (48%), Positives = 553/924 (59%), Gaps = 107/924 (11%)
Query: 42 PPLPP---EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYS-SYQASFNS---NASE 94
P LP +P ALVAALDGT++LVD+ G++ WSF TG PIY SY+A N N
Sbjct: 37 PSLPAPSLKPATALVAALDGTMYLVDSVSGRVFWSFSTGSPIYHHSYRAPINDPEDNNVT 96
Query: 95 FYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKS 154
++ +DWEL H RFGK +LS S Y+ P +K+G G+ K ++F VD K+
Sbjct: 97 GLIECGDDWELIVHDARFGK-TRLSESIANYVALTPTETKEGASIFGSKKDTMFEVDAKT 155
Query: 155 GRVV-DNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVL 213
G +V +Y LD +AS D+ V ELV+ L L+ I R+DYVL
Sbjct: 156 GALVRTHYDLD-NASNVVLSGDDRLQRVTTTKNNELVDPA--QLDSPEFLLKITRSDYVL 212
Query: 214 QSTSQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQ 273
+S + +G VLW + A+FKA CQ F++ +D D C
Sbjct: 213 KSLGK-AGIVLWTMNVAEFKARLICQHNENPSGRDSFDAEDGYVVDRGLDFAMPYACWDM 271
Query: 274 MTASVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLPDKVDRP---- 329
VYR R N L A L G Q +++ P S L LP + D
Sbjct: 272 KLNEVYRQRKNFLLH-------PADPGRLSGIYQENIMLPF-HTSELMLPSQPDMDGFIL 323
Query: 330 --------PL----ALPSTETEI------------PWTLGMPGGSVSEINKKHAFVEGFR 365
PL +LPS + ++ PW L M + E++ K +E
Sbjct: 324 GQGGNMMLPLPISNSLPSLQQKLDFCESNDNVAMLPWPL-MEISTQEEVDPKKV-IEWST 381
Query: 366 SYIQSFIVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNS 425
+ +F+ F+FYH V +K QN E +++ PKKKK+R+ N T ++
Sbjct: 382 TLPLILFTIFLGF-----FVFYHYLVVTNKDQNRELNSRSLPPKKKKARKSVKNNITIDN 436
Query: 426 EKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGS 485
+ + P S E D L+ N + T+T + +VDGRRIGKL V NKEIAKGS
Sbjct: 437 RQDK---PMSS--AEEDKLARKETNTD----TYTQM---QVDGRRIGKLFVSNKEIAKGS 484
Query: 486 NGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545
NGT+V EG YEGR VAVKRLVK HHDVA KEIQNLIASD+HPNIVRWYGVE D DFVYL+
Sbjct: 485 NGTIVFEGTYEGRVVAVKRLVKAHHDVAHKEIQNLIASDRHPNIVRWYGVECDHDFVYLA 544
Query: 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE-LWKANGHP 604
LERCTC+L+DLI++ S E ++Q SN RI + D+ LWKANG P
Sbjct: 545 LERCTCNLDDLIHMYSDISENPTICEDQYSNFFKNARI------DTRNDMRYLWKANGFP 598
Query: 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC 664
S LLK+ RD+VSGL HLHE+G+IHRDLKPQNVLI K+KS CAKLSDMGISKRL DMS
Sbjct: 599 SPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLILKEKSLCAKLSDMGISKRLLEDMSS 658
Query: 665 LTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAI 724
L TG GSSGWQAPEQL+QGRQTRA+
Sbjct: 659 LGHTVTGC--------------------------------GSSGWQAPEQLVQGRQTRAV 686
Query: 725 DLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784
DLFSLGC+LFFC+TGG+HP+GE ERD NIVK++KDLFLVE IPEA DL + LL+PNPDL
Sbjct: 687 DLFSLGCVLFFCMTGGRHPFGERLERDFNIVKNQKDLFLVEFIPEADDLISCLLNPNPDL 746
Query: 785 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEK 844
R A VL+HP FW+++ RLSFLRDVSDRVELEDRE DS LL+ALE IA +AL KWDEK
Sbjct: 747 RLTAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDREIDSDLLKALESIAPLALGAKWDEK 806
Query: 845 METKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRF 904
++ FI NIGRYRRYKYD+VR LLRV+RNK NH+RELPQ+IQEL+G PEGF +YF+ RF
Sbjct: 807 LDPDFITNIGRYRRYKYDSVRHLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRF 866
Query: 905 PKLLIEVYNVIFTYCKGEEVFHKY 928
P+LLIEVY VI+ CK +E F +Y
Sbjct: 867 PRLLIEVYKVIYKSCKDDECFQRY 890
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297808453|ref|XP_002872110.1| hypothetical protein ARALYDRAFT_489300 [Arabidopsis lyrata subsp. lyrata] gi|297317947|gb|EFH48369.1| hypothetical protein ARALYDRAFT_489300 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/908 (45%), Positives = 532/908 (58%), Gaps = 113/908 (12%)
Query: 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASF----------NSNASEFY 96
E LV+ +DG+I LVD K+ W+F T PIYSSYQA ++ +F+
Sbjct: 45 ESGYVLVSTVDGSISLVDMSSQKLDWTFHTNEPIYSSYQAPHYHYTTDEERASALGDDFF 104
Query: 97 LDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGR 156
+D D+DW L+ S R GK A E+I +PY S D + LG TSVFL+D K+G+
Sbjct: 105 MDCDKDWRLFNSSMRKGKRVNEIVDASEFIGTLPYTSTDR-IVLGKKDTSVFLLDWKTGK 163
Query: 157 VVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQST 216
+V Y +D S ++D+ K +V L SG + + +LVYI R D+ +Q
Sbjct: 164 LVKRYRMDELYSNTVVENDKEKAIVLSKEAPILFGSGFKESEDLPELVYIERKDFKIQCI 223
Query: 217 SQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTA 276
S+ G+VLW+V+YA +A+ + E G + G + ++HLP +
Sbjct: 224 SK-FGDVLWSVSYAKMEAKLQNHESVHLMGGLSSSDGIPIRTSW---GKNHLPLSYTTSV 279
Query: 277 SVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLPDKVDRPPLALPST 336
V +LR+ + +G + + LP DR P D LALPS
Sbjct: 280 PVVQLRNVNYETLFPRLGFLDEALYLPFQ---------DRKPNRLAPG--DGKHLALPSN 328
Query: 337 ETEIPWTLGMPGGSVSEINKKHAFVEGFRSYIQSFIVLFIALC----PIIGFLFYHSKQ- 391
+ +++I GF S IVL C + G F +Q
Sbjct: 329 KE---------AEEITDIIDGSTTQAGFASKFSGLIVLLFGFCVTMLSVCGIFFCRLRQG 379
Query: 392 --VKSKKQNEEHIT--------KTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGET 441
+K +E I K G KK+ G N++ +N E
Sbjct: 380 MWIKDPYVSEVPIAIPKKKKSKKNGTHKKENGLISGGNKDPSNEE--------------- 424
Query: 442 DGLSHITGNGEKFLLTFTDLIDDR-VDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSV 500
N ++ L F L ++ +G R+GKL V NKEIAKGSNGTVVLEG+YEGR V
Sbjct: 425 --------NDKRLLTAFPGLNNNSSAEGYRVGKLFVSNKEIAKGSNGTVVLEGSYEGRLV 476
Query: 501 AVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVL 560
AVKRLV++HHDVA KEI NL+ASD+HPNIVRWYGV+ D+ F+Y+SLERC CSLNDLIY
Sbjct: 477 AVKRLVQSHHDVAQKEILNLMASDKHPNIVRWYGVDQDEHFIYISLERCACSLNDLIYAS 536
Query: 561 SGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620
S E + + I+ P+ EN K +ELWK NGHPS LLK+ DIV+GL
Sbjct: 537 SALLESPVASSSIQP-------IQRNPIFENGKGVELWKENGHPSPVLLKLMSDIVAGLV 589
Query: 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680
HLH+IG++HRDLKPQNVLI K+ S CAKLSDMGISKRL D S LT+N+TG
Sbjct: 590 HLHDIGIVHRDLKPQNVLIVKNSSVCAKLSDMGISKRLPADTSALTRNSTGS-------- 641
Query: 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 740
GSSGWQAPEQL RQTRA+DLFSLGC+LFFC+T G
Sbjct: 642 ------------------------GSSGWQAPEQLRNERQTRAVDLFSLGCVLFFCMTAG 677
Query: 741 KHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800
KHPYG+++ERD N++ DRKDLFL+E +PEAV L + LL+P+P+LRP+AQ VL+HP FW +
Sbjct: 678 KHPYGDNYERDVNVLNDRKDLFLIESLPEAVHLLSGLLNPDPNLRPRAQEVLHHPLFWNS 737
Query: 801 DTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYK 860
D RLSFLRD SDRVELE+RE S+LL ALE A V LNG+WDEK+++ F++NIGRYRRYK
Sbjct: 738 DMRLSFLRDASDRVELENREEGSQLLAALESTAAVTLNGRWDEKLDSIFLDNIGRYRRYK 797
Query: 861 YDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCK 920
+D++RDLLRVIRNK NH+RELP+++QELLGS PEGF YFS RFPKLLI+VY V+F YC
Sbjct: 798 FDSIRDLLRVIRNKLNHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCN 857
Query: 921 GEEVFHKY 928
EE F KY
Sbjct: 858 NEEFFFKY 865
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187908|ref|NP_001190383.1| protein inositol requiring 1-1 [Arabidopsis thaliana] gi|332005920|gb|AED93303.1| protein inositol requiring 1-1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/897 (45%), Positives = 536/897 (59%), Gaps = 81/897 (9%)
Query: 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASE----------FY 96
E LV+ +DG+I LVD K+ W+F T PIYSSYQA ++ FY
Sbjct: 31 ESGYVLVSTVDGSISLVDMSSQKLDWTFHTNEPIYSSYQAPHYHYTTDEERSSVLGDDFY 90
Query: 97 LDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGR 156
+D D+DW LY S R GK A E+I +PY S D + LG TSVFL+D K+G+
Sbjct: 91 MDCDKDWRLYNSSVRKGKRVNEIVDASEFIGTLPYTSTDR-IVLGKKDTSVFLLDWKTGK 149
Query: 157 VVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQST 216
+V Y +D S ++D+ K +V L SG + +LVYI R D+ +Q
Sbjct: 150 LVKRYRMDELYSNTVVENDKEKAIVLSKEAPLLFGSGFKKSEDFPELVYIERKDFKIQCI 209
Query: 217 SQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVESHLPCHTQMTA 276
S+ G+VLW+V+YA +A+ + E + SG + G ++ P +
Sbjct: 210 SK-FGDVLWSVSYAKMEAKLQNHESVQFISGLSSSVG-----------KNQFPLSYTTSV 257
Query: 277 SVYRLRDNSLPEFLSVIGKVAGWISLPGSSQNSLLGPVDRNSPLFLP-DKVDRPPLALPS 335
+ +LR+ +G + + LP + + + L LP +K L+LP
Sbjct: 258 PMVQLRNVKYETLFPRLGFLDEALYLPFQDRKPNQLAIGDGNQLTLPGNKEAEEVLSLPL 317
Query: 336 TETEIPWTLGMPGGSVSEINKKHAFVEGFRSYIQSFIVLFIALC----PIIGFLFYHSKQ 391
ET I + GS + GF S IVL C + G FY +Q
Sbjct: 318 PETVISQITDIIDGSTKQ--------AGFASKFSGLIVLIFGFCVTMLSVCGLFFYRLRQ 369
Query: 392 VKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNG 451
S + E ++++ I KK + +K I G SH N
Sbjct: 370 --SIRIKEPYVSEVPIATPKKKKSKKNGTTKAVHKKENGFIS-----GGNKDPSH-EENE 421
Query: 452 EKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD 511
++ L F L + +G R+GKL V NKEIAKGSNGTVVLEG+YEGR VAVKRLV++HHD
Sbjct: 422 KRLLTAFPGLNNSSAEGYRVGKLFVSNKEIAKGSNGTVVLEGSYEGRLVAVKRLVQSHHD 481
Query: 512 VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAK 571
VA KEI NL+ASD+H NIVRWYGV+ D+ F+Y+SLE C CSLNDLIY S E + +
Sbjct: 482 VAQKEILNLMASDKHSNIVRWYGVDQDEHFIYISLELCACSLNDLIYASSALLESPMASS 541
Query: 572 EQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631
S I++ P+ EN K +ELWK NGHPS LLK+ RDIV+GL HLH+IG++HRD
Sbjct: 542 SIHS-------IQINPIFENGKGVELWKENGHPSPVLLKLMRDIVAGLVHLHDIGIVHRD 594
Query: 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691
LKPQNVLI K+ S CAKLSDMGISKRL D S LT+N+TG+
Sbjct: 595 LKPQNVLIVKNSSLCAKLSDMGISKRLPADTSALTRNSTGLGSG---------------- 638
Query: 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
SSGWQAPEQL RQTRA+DLFSLGC+LFFC+TGGKHPYG+++ERD
Sbjct: 639 --------------SSGWQAPEQLRNERQTRAVDLFSLGCVLFFCMTGGKHPYGDNYERD 684
Query: 752 ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVS 811
N++ D+KDLFL+E +PEAV L T LL+P+P+LRP+AQ+V++HP FW +D RLSFLRD S
Sbjct: 685 VNVLNDQKDLFLIESLPEAVHLLTGLLNPDPNLRPRAQDVMHHPLFWNSDMRLSFLRDAS 744
Query: 812 DRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVI 871
DRVELE+RE S+LL ALE A V LNG+WDEK+++ F++NIGRYRRYK+D++RDLLRVI
Sbjct: 745 DRVELENREEGSQLLAALESTAAVTLNGRWDEKLDSIFLDNIGRYRRYKFDSIRDLLRVI 804
Query: 872 RNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
RNK NH+RELP+++QELLGS PEGF YFS RFPKLLI+VY V+F YC EE F KY
Sbjct: 805 RNKLNHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 861
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 934 | ||||||
| TAIR|locus:2053928 | 841 | IRE1A [Arabidopsis thaliana (t | 0.246 | 0.273 | 0.695 | 2.4e-175 | |
| CGD|CAL0001725 | 1224 | IRE1 [Candida albicans (taxid: | 0.241 | 0.184 | 0.394 | 3.2e-74 | |
| UNIPROTKB|Q5A7G9 | 1224 | IRE1 "Likely protein kinase/en | 0.241 | 0.184 | 0.394 | 3.2e-74 | |
| TAIR|locus:2081551 | 554 | AT3G11870 [Arabidopsis thalian | 0.235 | 0.397 | 0.423 | 1.3e-70 | |
| UNIPROTKB|F1NPU5 | 946 | Gga.10887 "Uncharacterized pro | 0.240 | 0.237 | 0.382 | 2.6e-68 | |
| WB|WBGene00002147 | 967 | ire-1 [Caenorhabditis elegans | 0.240 | 0.232 | 0.437 | 6.1e-66 | |
| POMBASE|SPAC167.01 | 1072 | ire1 "serine/threonine protein | 0.327 | 0.285 | 0.339 | 6.3e-66 | |
| DICTYBASE|DDB_G0267650 | 984 | ireA "IRE family protein kinas | 0.235 | 0.223 | 0.402 | 6.9e-66 | |
| MGI|MGI:1930134 | 977 | Ern1 "endoplasmic reticulum (E | 0.234 | 0.224 | 0.390 | 1.4e-65 | |
| RGD|1559716 | 963 | Ern1 "endoplasmic reticulum to | 0.234 | 0.227 | 0.390 | 1.5e-65 |
| TAIR|locus:2053928 IRE1A [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 869 (311.0 bits), Expect = 2.4e-175, Sum P(4) = 2.4e-175
Identities = 160/230 (69%), Positives = 191/230 (83%)
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF 762
G GSSGWQAPEQLLQGRQTRA+D+FSLGC++F+ ITG KHP+G+ ERD NIVK++ DLF
Sbjct: 610 GSGSSGWQAPEQLLQGRQTRAVDMFSLGCVIFYTITGCKHPFGDDLERDVNIVKNKVDLF 669
Query: 763 LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESD 822
LVEH+PEA DL +RLL+P+PDLRP A VL HP FW ++ RLSFLRD SDRVELE+RE+D
Sbjct: 670 LVEHVPEASDLISRLLNPDPDLRPSATEVLLHPMFWNSEMRLSFLRDASDRVELENREAD 729
Query: 823 SKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELP 882
S++L+A+E A VA+ GKWDEK+E FI NIGRYRRYKYD++RDLLRVIRNK NH RELP
Sbjct: 730 SEILKAMESTAPVAIGGKWDEKLEPVFITNIGRYRRYKYDSIRDLLRVIRNKLNHHRELP 789
Query: 883 QDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
+IQEL+G+ PEGF YF+ RFPKLLIEVY VI +C+ EEVF KY D
Sbjct: 790 PEIQELVGTVPEGFDEYFAVRFPKLLIEVYRVISLHCREEEVFRKYFKCD 839
|
|
| CGD|CAL0001725 IRE1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 494 (179.0 bits), Expect = 3.2e-74, Sum P(5) = 3.2e-74
Identities = 92/233 (39%), Positives = 146/233 (62%)
Query: 703 GYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
G G++ G++ T+AID+FSLGC+ ++ +TGG HP+G+ + R+ NI+K DL
Sbjct: 991 GNGATNGSVSNSATSGKRLTKAIDIFSLGCVFYYILTGGYHPFGDRYLREGNIIKGEYDL 1050
Query: 762 -FLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVEL 816
L+E P E++DL ++++ +P RP +L HP FW+ RL FL VSDR E+
Sbjct: 1051 SLLMEKCPNDRYESIDLISKIISHDPSQRPNTGKILKHPLFWSFSKRLEFLLKVSDRFEI 1110
Query: 817 EDRESDSKLLRALEGIALVALNGKWDEKM-ETKFIENIGRYRRYKYDNVRDLLRVIRNKS 875
E R+ S LL LE A NG W + + + +F++N+G+YR+Y + + DLLR +RNK
Sbjct: 1111 EKRDPPSPLLLKLEEHAKAVHNGNWHKLLNDDEFMDNLGKYRKYSPEKLMDLLRAMRNKY 1170
Query: 876 NHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+H+ ++P+ +Q + P+GFY YF+ +FPKLL+E+Y V+ + E VF +Y
Sbjct: 1171 HHYNDMPESLQLKMAPLPDGFYKYFNDKFPKLLMEIYYVVEENFRNEHVFKEY 1223
|
|
| UNIPROTKB|Q5A7G9 IRE1 "Likely protein kinase/endoribonuclease Ire1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 494 (179.0 bits), Expect = 3.2e-74, Sum P(5) = 3.2e-74
Identities = 92/233 (39%), Positives = 146/233 (62%)
Query: 703 GYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
G G++ G++ T+AID+FSLGC+ ++ +TGG HP+G+ + R+ NI+K DL
Sbjct: 991 GNGATNGSVSNSATSGKRLTKAIDIFSLGCVFYYILTGGYHPFGDRYLREGNIIKGEYDL 1050
Query: 762 -FLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVEL 816
L+E P E++DL ++++ +P RP +L HP FW+ RL FL VSDR E+
Sbjct: 1051 SLLMEKCPNDRYESIDLISKIISHDPSQRPNTGKILKHPLFWSFSKRLEFLLKVSDRFEI 1110
Query: 817 EDRESDSKLLRALEGIALVALNGKWDEKM-ETKFIENIGRYRRYKYDNVRDLLRVIRNKS 875
E R+ S LL LE A NG W + + + +F++N+G+YR+Y + + DLLR +RNK
Sbjct: 1111 EKRDPPSPLLLKLEEHAKAVHNGNWHKLLNDDEFMDNLGKYRKYSPEKLMDLLRAMRNKY 1170
Query: 876 NHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+H+ ++P+ +Q + P+GFY YF+ +FPKLL+E+Y V+ + E VF +Y
Sbjct: 1171 HHYNDMPESLQLKMAPLPDGFYKYFNDKFPKLLMEIYYVVEENFRNEHVFKEY 1223
|
|
| TAIR|locus:2081551 AT3G11870 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 103/243 (42%), Positives = 145/243 (59%)
Query: 705 GSSGWQAPEQLLQGRQTRA---IDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK-D 760
GSSGWQAPEQL + ++ + D+F+ GC+L + + G HP+G ERD NI + K +
Sbjct: 314 GSSGWQAPEQLNKDKKKKEDFPADMFNFGCLLHYAVMG-THPFGSPSERDTNIKTNNKTN 372
Query: 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRE 820
L LV ++ EA++L +LL+ PDLRP A VL HP FW ++ RL FLR+ SDR+EL D
Sbjct: 373 LSLVTNL-EAINLIEQLLNYKPDLRPSATQVLLHPLFWDSEKRLFFLREASDRIEL-DIT 430
Query: 821 SDSKLLRALEGIALVALNGKWDEKMETKFI---ENIGR---------YRR-YKYDNVRDL 867
L + + L + W K+ FI EN+ + Y R YKY ++R L
Sbjct: 431 MWGDLNKTIAPRVL-GESKDWASKLGKTFITHIENLAQAQPGQESRQYNRSYKYWSLRHL 489
Query: 868 LRVIRNKSNHFRELPQD--IQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVF 925
LR+IRN +H RE+ D I+E++G PEG +F+ RFP L++E+Y I +CKGEE F
Sbjct: 490 LRLIRNILSHHREILDDPKIKEMVGKVPEGLDIFFTARFPNLMMEIYAFISMHCKGEEAF 549
Query: 926 HKY 928
KY
Sbjct: 550 EKY 552
|
|
| UNIPROTKB|F1NPU5 Gga.10887 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 436 (158.5 bits), Expect = 2.6e-68, Sum P(5) = 2.6e-68
Identities = 90/235 (38%), Positives = 136/235 (57%)
Query: 705 GSSGWQAPEQLLQG---RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
G+ GW APE L + T +D+FS GC+ ++ ++ G HP+G+S +R ANI+ L
Sbjct: 704 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVVSEGSHPFGKSLQRQANILLGAYSL 763
Query: 762 -FLVEHIPEAV---DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
FL E + DL ++++ +P RP A VL HPFFW+ + +L F +DVSDR+E E
Sbjct: 764 EFLDAGRHEDIVARDLIEQMINMDPQKRPSASCVLKHPFFWSLEKQLQFFQDVSDRIEKE 823
Query: 818 DRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNH 877
D +++ LE + W E + ++ ++R YK +VRDLLR +RNK +H
Sbjct: 824 --ALDGPIVKQLERGGREVVKMDWREHITVPLQTDLRKFRSYKGGSVRDLLRAMRNKKHH 881
Query: 878 FRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
+RELP ++QE LGS P+ F YF+ RFP LL+ Y+ + C+ E +F Y D
Sbjct: 882 YRELPPEVQETLGSIPDDFVCYFTARFPHLLLHTYHAMRICCQ-ERLFQHYYQQD 935
|
|
| WB|WBGene00002147 ire-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 6.1e-66, Sum P(5) = 6.1e-66
Identities = 101/231 (43%), Positives = 148/231 (64%)
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
G+ GW APE L+ + +D+FSLGCI ++ +T G HP+G+S R ANIV L +
Sbjct: 683 GTDGWIAPEVLISASTSYPVDIFSLGCIFYYVLTSGTHPFGKSLHRQANIVNGEYTLNKL 742
Query: 765 EHIPE---AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRES 821
+ + A DL + +L+ P R A VLNHPFFWT++ RL++ DVSDRVE E E
Sbjct: 743 ADLDDWSLADDLISSMLNVEPLHRLTADAVLNHPFFWTSEKRLAYFSDVSDRVEKE--ED 800
Query: 822 DSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFREL 881
+S ++R +E A + + G W EK+ E++ ++R YK +VRDLLR +RNK +H+REL
Sbjct: 801 NSPVVRRIETDARIVVCGGWREKICDALKEDLRKFRTYKSFSVRDLLRAMRNKKHHYREL 860
Query: 882 PQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932
P+D+++ LG P+ F +YF+ RFP+LL+ VY YC GE VF +Y ++D
Sbjct: 861 PEDVRQSLGDIPDQFLHYFTSRFPRLLLHVYKAT-EYCSGEAVFKRYYSDD 910
|
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| POMBASE|SPAC167.01 ire1 "serine/threonine protein kinase, sensor for unfolded proteins in the ER Ire1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 497 (180.0 bits), Expect = 6.3e-66, Sum P(4) = 6.3e-66
Identities = 116/342 (33%), Positives = 185/342 (54%)
Query: 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS-------FCAKLSDMGISKR 657
S L+ + I G+SHLH + L+HRDLKPQN+L+ + S A +SD G+SK+
Sbjct: 748 SIDLVSLLYQIAFGVSHLHSLDLVHRDLKPQNILLVVNNSPNLSKTRVRALISDFGLSKK 807
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ 717
L + S L +N T E +G + GS Q+ E ++
Sbjct: 808 LDFNQSSL-RNTT------------------FEAAGSYGWRSPEILSGSLSQQSKEIQVK 848
Query: 718 GRQTR------AIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE-- 769
R+ R A D+F+LGCI ++ +TGG HP+G ++ + NI+K L ++ + E
Sbjct: 849 TREGRIRQASHATDIFALGCIFYYTLTGGMHPFGSHYDCEGNILKGNYCLVHLQSLGECG 908
Query: 770 --AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLR 827
A DL ++ P RP + VLNHP FW +L FL DVSDR E+E+R+ S LL+
Sbjct: 909 VLAADLIEDMIAFEPSKRPTIEVVLNHPLFWDYAKKLDFLIDVSDRFEVEERDPPSPLLQ 968
Query: 828 ALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQE 887
LE + + W + + ++N+G+YR+Y + D+LRV+RNK +H+++LP+ ++
Sbjct: 969 MLENNSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRHHYQDLPESVRR 1028
Query: 888 LLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 929
+LG P+GF +YF +FP LL+ Y+++ E F +Y+
Sbjct: 1029 VLGDLPDGFTSYFVEKFPMLLLHCYHLVKDVLYEESQFKRYL 1070
|
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| DICTYBASE|DDB_G0267650 ireA "IRE family protein kinase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 6.9e-66, Sum P(4) = 6.9e-66
Identities = 91/226 (40%), Positives = 135/226 (59%)
Query: 706 SSGWQAPEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL 763
S GWQ P + L G R T+ +D+FSLGC++++ +TG HP+G + R+ N++K + D+
Sbjct: 760 SHGWQ-PAEYLNGTNRNTKKVDIFSLGCVVYYLLTGA-HPFGHRYNREKNVLKGKFDIDQ 817
Query: 764 VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDS 823
++H+P+ L ++ P+ RP +NHPFFW +LSFL SD +E E S
Sbjct: 818 IKHLPDIHQLVHSMIQFEPEKRPDIGECINHPFFWEVHKKLSFLVAASDYLEFEKPTSPL 877
Query: 824 KLLRALEGIALVAL-NGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELP 882
L + LV +G W K++ I+NIGRYR+Y ++RDLLRVIRNK NH+R+L
Sbjct: 878 NL-EIDSHVDLVTDGSGDWWLKIDQVLIDNIGRYRKYNGKSIRDLLRVIRNKFNHYRDLS 936
Query: 883 QDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+ Q LG P+GF+NYF +FP+L I Y I K ++ F +Y
Sbjct: 937 PEEQTCLGILPDGFFNYFDLKFPQLFIVTYLFILKNLKNDQYFVQY 982
|
|
| MGI|MGI:1930134 Ern1 "endoplasmic reticulum (ER) to nucleus signalling 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 440 (159.9 bits), Expect = 1.4e-65, Sum P(5) = 1.4e-65
Identities = 91/233 (39%), Positives = 139/233 (59%)
Query: 705 GSSGWQAPEQLLQG---RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD--RK 759
G+ GW APE L + T +D+FS GC+ ++ I+ G HP+G+S +R ANI+
Sbjct: 733 GTEGWIAPEMLSEDCKDNPTYTVDIFSAGCVFYYVISEGNHPFGKSLQRQANILLGACNL 792
Query: 760 DLFLVEHIPEAV--DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
D F + + + +L +++ +P RP A++VL HPFFW+ + +L F +DVSDR+E E
Sbjct: 793 DCFHSDKHEDVIARELIEKMIAMDPQQRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKE 852
Query: 818 DRESDSKLLRALE--GIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKS 875
D ++R LE G A+V ++ W E + ++ ++R YK +VRDLLR +RNK
Sbjct: 853 --ALDGPIVRQLERGGRAVVKMD--WRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKK 908
Query: 876 NHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+H+RELP ++QE LGS P+ F YF+ RFP LL Y + C+ E +F Y
Sbjct: 909 HHYRELPVEVQETLGSIPDDFVRYFTSRFPHLLSHTYQAM-ELCRHERLFQTY 960
|
|
| RGD|1559716 Ern1 "endoplasmic reticulum to nucleus signaling 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 439 (159.6 bits), Expect = 1.5e-65, Sum P(5) = 1.5e-65
Identities = 91/233 (39%), Positives = 139/233 (59%)
Query: 705 GSSGWQAPEQLLQG---RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR--K 759
G+ GW APE L + T +D+FS GC+ ++ I+ G HP+G+S +R ANI+
Sbjct: 719 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGNHPFGKSLQRQANILLGACSL 778
Query: 760 DLFLVEHIPEAV--DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
D F + + + +L +++ +P RP A++VL HPFFW+ + +L F +DVSDR+E E
Sbjct: 779 DCFHSDKHEDVIARELIEKMIAMDPQQRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKE 838
Query: 818 DRESDSKLLRALE--GIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKS 875
D ++R LE G A+V ++ W E + ++ ++R YK +VRDLLR +RNK
Sbjct: 839 SL--DGPIVRQLERGGRAVVKMD--WRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKR 894
Query: 876 NHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 928
+H+RELP ++QE LGS P+ F YF+ RFP LL Y + C+ E +F Y
Sbjct: 895 HHYRELPLEVQETLGSIPDDFVRYFTSRFPHLLSHTYRAM-ELCRHERLFQTY 946
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.26 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.7.11.1 | 0.737 |
| 3rd Layer | 2.7.11 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00002908001 | SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (852 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 934 | |||
| cd10422 | 129 | cd10422, RNase_Ire1, RNase domain (also known as t | 3e-59 | |
| pfam06479 | 127 | pfam06479, Ribonuc_2-5A, Ribonuclease 2-5A | 3e-55 | |
| cd09213 | 312 | cd09213, Luminal_IRE1_like, The Luminal domain, a | 2e-42 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-41 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-38 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-35 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 3e-35 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-29 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-26 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 9e-25 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-24 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 6e-24 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-22 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-22 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 8e-22 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-21 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-20 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-20 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 7e-20 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 7e-20 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 8e-20 | |
| cd09769 | 295 | cd09769, Luminal_IRE1, The Luminal domain, a dimer | 6e-19 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-19 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 1e-18 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-18 | |
| cd10321 | 127 | cd10321, RNase_Ire1_like, RNase domain (also known | 2e-18 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-18 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-18 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 3e-18 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-17 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 4e-17 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-16 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-16 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-16 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-16 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 7e-16 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-15 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 3e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 3e-15 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 7e-15 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 9e-15 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-14 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 3e-14 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-14 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 4e-14 | |
| smart00580 | 57 | smart00580, PUG, domain in protein kinases, N-glyc | 6e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 7e-14 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 1e-13 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-13 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-13 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 8e-13 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-12 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-12 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-12 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 3e-12 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-12 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-11 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 6e-11 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-10 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-10 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 1e-10 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 1e-10 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-10 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 2e-10 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-10 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-10 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 3e-10 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 3e-10 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 4e-10 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 4e-10 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 5e-10 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 5e-10 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 5e-10 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 6e-10 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 6e-10 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 7e-10 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 8e-10 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 8e-10 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 8e-10 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-09 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-09 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 3e-09 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-09 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 3e-09 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-09 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-09 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 4e-09 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 5e-09 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 7e-09 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 7e-09 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 8e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-08 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 1e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 1e-08 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-08 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-08 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-08 | |
| cd10423 | 119 | cd10423, RNase_RNase-L, RNase domain (also known a | 3e-08 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-08 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 3e-08 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-08 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-08 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 4e-08 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 4e-08 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 4e-08 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 5e-08 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-08 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 6e-08 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 7e-08 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 7e-08 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 7e-08 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 8e-08 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 1e-07 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-07 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-07 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-07 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-07 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-07 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-07 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-07 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-07 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-07 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 3e-07 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-07 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 3e-07 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 3e-07 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-07 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-07 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 3e-07 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-07 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 5e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-07 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 5e-07 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 6e-07 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 6e-07 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 6e-07 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 6e-07 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 7e-07 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-06 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 1e-06 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-06 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 1e-06 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-06 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-06 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-06 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 2e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 3e-06 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-06 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 3e-06 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 3e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 3e-06 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 3e-06 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 3e-06 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 3e-06 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 3e-06 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 4e-06 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 4e-06 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 4e-06 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-06 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-06 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-06 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-06 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 5e-06 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 5e-06 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 5e-06 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 6e-06 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 7e-06 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 8e-06 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 1e-05 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-05 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-05 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 1e-05 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-05 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 1e-05 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-05 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-05 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-05 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-05 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 4e-05 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 4e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 4e-05 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 4e-05 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 4e-05 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-05 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 4e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 5e-05 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 5e-05 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 5e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 7e-05 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 7e-05 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 7e-05 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 7e-05 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 7e-05 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 7e-05 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 8e-05 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 8e-05 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 8e-05 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 8e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-04 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-04 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-04 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 1e-04 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-04 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 1e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 1e-04 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-04 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-04 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-04 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-04 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-04 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-04 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 2e-04 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-04 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-04 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-04 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 2e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-04 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 3e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-04 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 3e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 3e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 4e-04 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 4e-04 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 4e-04 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-04 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-04 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-04 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 6e-04 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 6e-04 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 6e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 8e-04 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.001 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 0.001 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.001 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.001 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 0.001 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 0.001 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 0.001 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 0.001 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 0.001 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 0.002 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 0.002 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.002 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.002 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.002 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.002 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 0.002 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 0.002 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 0.003 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.004 |
| >gnl|CDD|199217 cd10422, RNase_Ire1, RNase domain (also known as the kinase extension nuclease domain) of Ire1 | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 3e-59
Identities = 70/126 (55%), Positives = 87/126 (69%)
Query: 803 RLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYD 862
RLSFL+DVSDR E E R+ S LL ALE A + G W EK++ FI+N+G+YR+YK
Sbjct: 3 RLSFLQDVSDRFEKEPRDPPSPLLLALESGADEVVGGDWREKLDKTFIDNLGKYRKYKGS 62
Query: 863 NVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGE 922
+VRDLLR +RNK +H+RELP D+QELLG P+GF YF+ RFP LLI VY + K E
Sbjct: 63 SVRDLLRALRNKKHHYRELPPDVQELLGPLPDGFLRYFTSRFPNLLIHVYRAVSDSLKNE 122
Query: 923 EVFHKY 928
F KY
Sbjct: 123 STFKKY 128
|
The model represents the C-terminal endoribonuclease domain of the multi-functional protein Ire1; Ire1 in addition contains a type I transmembrane serine/threonine protein kinase (STK) domain, and a Luminal dimerization domain. Ire1 is essential for the endoplasmic reticulum (ER) unfolded protein response (UPR), which acts as an ER stress sensor and is the oldest and most conserved component of the UPR in eukaryotes. During ER stress, IRE1 dimerizes through its N-terminal luminal domain and forms oligomers, promoting trans-autophosphorylation by its cytosolic kinase domain. This leads to a conformational change that stimulates its endoribonuclease (RNase) activity and results in the cleavage of its mRNA substrate, Hac1 in yeast and Xbp1 in metazoans, thus promoting a splicing event that enables translation into a transcription factor which activates the UPR. This RNase domain is homologous to the RNase domain of RNase L, and possesses a novel fold for a nuclease and appears to be rigid irrespective of the activation state of IRE1. Structural analysis and mutational studies have revealed that an early stage 'phosphoryl-transfer' competent conformation of IRE1 favors face-to-face dimerization of the kinase domains which precedes and is distinct from the RNase 'active' back-to-back conformation. Furthermore, in yeast IRE1, the flavonol quercetin activates the RNase and potentiates activation of the protein kinase by ADP, hinting at the possible existence of endogenous cytoplasmic ligands that may function along with stress signals from ER lumen in order to modulate IRE1 activity, thus identifying IRE1 as a target for development of ATP-competitive inhibitors to modulate the UPR with specific relevance for multiple myeloma. Length = 129 |
| >gnl|CDD|219051 pfam06479, Ribonuc_2-5A, Ribonuclease 2-5A | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 3e-55
Identities = 65/126 (51%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Query: 803 RLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYD 862
RLSFL DVSDR E+EDR+ S LL+ LE + + G W +K++ F++++G++R+YK D
Sbjct: 2 RLSFLCDVSDRFEIEDRDPPSPLLKLLERTSRAVVGGDWTKKLDKAFMDDLGKFRKYKGD 61
Query: 863 NVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGE 922
+VRDLLR IRNK +H+RELP++++E+LG P+GF YF+ RFP LLI VY V+ C+ E
Sbjct: 62 SVRDLLRAIRNKKHHYRELPEELKEILGDLPDGFLQYFTERFPDLLIHVYTVLK-NCEYE 120
Query: 923 EVFHKY 928
++F KY
Sbjct: 121 KLFPKY 126
|
This domain is a endoribonuclease. Specifically it cleaves an intron from Hac1 mRNA in humans, which causes it to be much more efficiently translated. Length = 127 |
| >gnl|CDD|188873 cd09213, Luminal_IRE1_like, The Luminal domain, a dimerization domain, of Inositol-requiring protein 1-like proteins | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 2e-42
Identities = 76/204 (37%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASE----FYLDVDEDWEL 105
+ LVA LDGTI+ VD G+I+WSF G P+YSSYQ+S + NA +D D L
Sbjct: 1 LLLVATLDGTIYAVDASSGEIQWSFDGGGPLYSSYQSSRDGNAESSSTMLIPSLDGDGNL 60
Query: 106 YFHSKRFGKMKKLSSSAEEYIRRMPYISK---DGGVTLGAMKTSVFLVDVKSGRVVDNYV 162
Y H K G +++L + E+ + P +S D V +G+ +TSVF +D K+G+++ Y
Sbjct: 61 YQHDKGHGSLQRLPLTIEDLVEASPLVSDTNEDDVVVVGSKRTSVFALDAKTGKIIKTYR 120
Query: 163 LDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGE 222
D ST G SD N P + EE +L+YI RTDYVLQ+ SG+
Sbjct: 121 ADGLPSTGGSDSDGNSTPGPDELQEE------------EELLYIGRTDYVLQAIDPRSGK 168
Query: 223 VLWNVAYADFKAEFRCQEVGKSFS 246
LWNV Y +++A + + S
Sbjct: 169 ELWNVTYGEYEALTLDADELGTSS 192
|
The Luminal domain is a dimerization domain present in Inositol-requiring protein 1 (IRE1), eukaryotic translation Initiation Factor 2-Alpha Kinase 3 (EIF2AK3), and similar proteins. IRE1 and EIF2AK3 are serine/threonine protein kinases (STKs) and are type I transmembrane proteins that are localized in the endoplasmic reticulum (ER). They are kinase receptors that are activated through the release of BiP, a chaperone bound to their luminal domains under unstressed conditions. This results in dimerization through their luminal domains, allowing trans-autophosphorylation of their kinase domains and activation. They play roles in the signaling of the unfolded protein response (UPR), which is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), contains an endoribonuclease domain in its cytoplasmic side and acts as an ER stress sensor. It is the oldest and most conserved component of the UPR in eukaryotes. Its activation results in the cleavage of its mRNA substrate, HAC1 in yeast and Xbp1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. EIF2AK3, also called PKR-like Endoplasmic Reticulum Kinase (PERK), phosphorylates the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. It functions as the central regulator of translational control during the UPR pathway. In addition to the eIF-2 alpha subunit, EIF2AK3 also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR. Length = 312 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 9e-41
Identities = 90/330 (27%), Positives = 133/330 (40%), Gaps = 91/330 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWY 533
+++ +GS G V L G+ VA+K + K L+EI+ L HPNIVR Y
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK-HPNIVRLY 63
Query: 534 GVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V D+D +YL +E C L DL+ + L+E R
Sbjct: 64 DVFEDEDKLYLVMEYCEGGDLFDLL---------------KKRGRLSEDEAR-------- 100
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
R I+S L +LH G++HRDLKP+N+L+ D+ KL+D
Sbjct: 101 -----------------FYLRQILSALEYLHSKGIVHRDLKPENILL--DEDGHVKLADF 141
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++++L T G+ + AP
Sbjct: 142 GLARQLDPGEKLTTF---------------------V---------------GTPEYMAP 165
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLVEHI--- 767
E LL +A+D++SLG IL+ +T GK P+ + + K F
Sbjct: 166 EVLLGKGYGKAVDIWSLGVILYELLT-GKPPFPGDDQLLELFKKIGKPKPPFPPPEWDIS 224
Query: 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
PEA DL +LL +P+ R A+ L HPFF
Sbjct: 225 PEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 84/322 (26%), Positives = 125/322 (38%), Gaps = 114/322 (35%)
Query: 481 IAKGSNGTVVL-EGNYEGRSVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGV 535
+ +G GTV L G+ VA+K + K + + L+EI+ L HPNIV+ YGV
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEIL-KKLNHPNIVKLYGV 59
Query: 536 ESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
D++ +YL +E C SL DL+ G E
Sbjct: 60 FEDENHLYLVMEYCEGGSLKDLLKENEGKLSED--------------------------- 92
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
++L++ I+ GL +LH G+IHRDLKP+N+L+ D + KL+D G+
Sbjct: 93 ------------EILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGL 139
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
SK L D S L G+ + APE
Sbjct: 140 SKLLTSDKSLLKTIV-----------------------------------GTPAYMAPEV 164
Query: 715 LLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDL 773
LL G + D++SLG IL+ +PE DL
Sbjct: 165 LLGKGYYSEKSDIWSLGVILYE-------------------------------LPELKDL 193
Query: 774 FTRLLDPNPDLRPKAQNVLNHP 795
++L +P+ RP A+ +L H
Sbjct: 194 IRKMLQKDPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-35
Identities = 88/339 (25%), Positives = 130/339 (38%), Gaps = 97/339 (28%)
Query: 476 VFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNI 529
+++ GS GTV + G+ VAVK L K A +EI+ L HPNI
Sbjct: 2 ELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRIL-RRLSHPNI 60
Query: 530 VRWYGVESDQDFVYLSLERC-TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
VR D+D +YL +E C L D + G E
Sbjct: 61 VRLIDAFEDKDHLYLVMEYCEGGDLFDYL-SRGGPLSED--------------------- 98
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ K+ I+ GL +LH G+IHRDLKP+N+L+ ++ K
Sbjct: 99 ------------------EAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVV--K 138
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D G++K+L S LT G+
Sbjct: 139 IADFGLAKKLLKSSSSLT--------------------TFV---------------GTPW 163
Query: 709 WQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL------ 761
+ APE LL G +D++SLG IL+ + GK P+ D + R+ L
Sbjct: 164 YMAPEVLLGGNGYGPKVDVWSLGVILY-ELLTGKPPFSGENILDQ-LQLIRRILGPPLEF 221
Query: 762 ---FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
EA DL + L+ +P RP A+ +L HP+F
Sbjct: 222 DEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 3e-35
Identities = 90/332 (27%), Positives = 132/332 (39%), Gaps = 90/332 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVA--LKEIQNLIA---SDQHPNIVRW 532
+ + +GS G+V L G +AVK V+ D L+ ++ I S QHPNIVR+
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKS-VELSGDSEEELEALEREIRILSSLQHPNIVRY 64
Query: 533 YGVESD--QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
YG E D ++ + + LE + SL+ L+ G E + IR
Sbjct: 65 YGSERDEEKNTLNIFLEYVSGGSLSSLLK-KFGKLPEPV--------------IR----- 104
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
K TR I+ GL++LH G++HRD+K N+L+ D KL
Sbjct: 105 --------------------KYTRQILEGLAYLHSNGIVHRDIKGANILV--DSDGVVKL 142
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
+D G +KRL + + G+ W
Sbjct: 143 ADFGCAKRLGDIET------GEGTGSVR---------------------------GTPYW 169
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN---IVKDRKDLFLVEH 766
APE + RA D++SLGC + T GK P+ E A I + + EH
Sbjct: 170 MAPEVIRGEEYGRAADIWSLGCTVIEMAT-GKPPWSELGNPMAALYKIGSSGEPPEIPEH 228
Query: 767 I-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ EA D + L +P RP A +L HPF
Sbjct: 229 LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 3e-29
Identities = 80/340 (23%), Positives = 125/340 (36%), Gaps = 114/340 (33%)
Query: 479 KEIAKGSNGTVVLEGNYEGRS------VAVKRL---VKTHHDVALKEIQNLIASDQHPNI 529
++I KG G V Y+ R VA+K + K + + EIQ ++ +HPNI
Sbjct: 6 EKIGKGGFGEV-----YKARHKRTGKEVAIKVIKLESKEKKEKIINEIQ-ILKKCKHPNI 59
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
V++YG +D +++ +E C+ SL DL+ + + E
Sbjct: 60 VKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTES--------------------- 98
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
Q+ V ++++ GL +LH G+IHRD+K N+L++ D K
Sbjct: 99 ------------------QIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE--VK 138
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L D G+S +L + T G+
Sbjct: 139 LIDFGLSAQLSDTKARNTM------------------------------------VGTPY 162
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP 768
W APE + D++SLG GK PY E + K LF +
Sbjct: 163 WMAPEVINGKPYDYKADIWSLGITAIELAE-GKPPYSEL-----PPM---KALFKIATNG 213
Query: 769 ------------EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E D + L NP+ RP A+ +L HPF
Sbjct: 214 PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 4e-26
Identities = 80/340 (23%), Positives = 127/340 (37%), Gaps = 83/340 (24%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNI 529
F K I +GS TVVL + + A+K L K E + L + HP I
Sbjct: 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI 64
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
++ Y D++ +Y LE G + + L+E R
Sbjct: 65 IKLYYTFQDEENLYFVLEYAPN----------GELLQYIR----KYGSLDEKCTRFY--- 107
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+A+ I+ L +LH G+IHRDLKP+N+L+ KD K+
Sbjct: 108 ---------------AAE-------ILLALEYLHSKGIIHRDLKPENILLDKDMH--IKI 143
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY--GSS 707
+D G +K L + K Q G++
Sbjct: 144 TDFGTAKVLDPN-----------------SSPESNKGDATNIDSQIEKNRRRFASFVGTA 186
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGES----FERDANIVKDRKDLF 762
+ +PE L + ++ DL++LGCI++ +T GK P G + F++ + + F
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLT-GKPPFRGSNEYLTFQK----ILKLEYSF 241
Query: 763 LVEHIPE-AVDLFTRLLDPNPDLRP----KAQNVLNHPFF 797
+ P A DL +LL +P R + HPFF
Sbjct: 242 P-PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 9e-25
Identities = 83/358 (23%), Positives = 140/358 (39%), Gaps = 118/358 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWY 533
K++ G+ G+V L N E G VA+K++ K + + L+E+++L ++HPNIV+
Sbjct: 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
V + D +Y E +L L+ K++ +E IR
Sbjct: 65 EVFRENDELYFVFEYMEGNLYQLM-------------KDRKGKPFSESVIR--------- 102
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+ I+ GL+H+H+ G HRDLKP+N+L+S K++D G
Sbjct: 103 ----------------SIIYQILQGLAHIHKHGFFHRDLKPENLLVS--GPEVVKIADFG 144
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAP 712
+++ ++ S +T Y S+ W +AP
Sbjct: 145 LAREIR---SRPP---------------------------------YTD-YVSTRWYRAP 167
Query: 713 EQLLQGRQT---RAIDLFSLGCIL------------------FFCI-----TGGKHPYGE 746
E LL R T +D+++LGCI+ + I T K + E
Sbjct: 168 EILL--RSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPE 225
Query: 747 SFE--RDANIVKDRKDLFLVEHI-----PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
++ + + + PEA+DL +L +P RP A L HP+F
Sbjct: 226 GYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 4e-24
Identities = 87/330 (26%), Positives = 134/330 (40%), Gaps = 94/330 (28%)
Query: 480 EIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-ALKEIQ---NLIASDQHPNIVRWYG 534
I +G+ G V N E G VA+K++ ALK I +L+ + +HPNIV++ G
Sbjct: 7 LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
D +Y+ LE Y +GS L
Sbjct: 67 SIETSDSLYIILE----------YAENGS-------------LRQ--------------- 88
Query: 595 IELWKANGHPSAQLLKV-TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+ K G L+ V ++ GL++LHE G+IHRD+K N+L +KD KL+D G
Sbjct: 89 --IIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV--VKLADFG 144
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ +L + D +V G+ W APE
Sbjct: 145 VATKLNDV--------SKDDASVV---------------------------GTPYWMAPE 169
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----NIVKDRKDLFLVEHI- 767
+ + A D++SLGC + +T G PY ++ + IV+D L E I
Sbjct: 170 VIEMSGASTASDIWSLGCTVIELLT-GNPPY---YDLNPMAALFRIVQDD-HPPLPEGIS 224
Query: 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
PE D + +P+LRP A+ +L HP+
Sbjct: 225 PELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 89/329 (27%), Positives = 134/329 (40%), Gaps = 92/329 (27%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV----ALKEIQ---NLIASDQHPNIVRW 532
+ GS G+V N + G AVK + A+K+++ L++ QHPNIV++
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G E ++D +Y+ LE V GS + L + E IRL
Sbjct: 68 LGTEREEDNLYIFLE----------LVPGGSLAKLL----KKYGSFPEPVIRLY------ 107
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
TR I+ GL +LH+ +HRD+K N+L+ D + KL+D
Sbjct: 108 -------------------TRQILLGLEYLHDRNTVHRDIKGANILV--DTNGVVKLADF 146
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++K++ V F GS W AP
Sbjct: 147 GMAKQV---------------------------------VEFSFAKSFK---GSPYWMAP 170
Query: 713 EQLL-QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLV-EHI- 767
E + QG A D++SLGC + T GK P+ + A I + K+L + +H+
Sbjct: 171 EVIAQQGGYGLAADIWSLGCTVLEMAT-GKPPWSQLEGVAAVFKIGRS-KELPPIPDHLS 228
Query: 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
EA D + L +P LRP A +L HPF
Sbjct: 229 DEAKDFILKCLQRDPSLRPTAAELLEHPF 257
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 97.2 bits (243), Expect = 3e-22
Identities = 72/329 (21%), Positives = 124/329 (37%), Gaps = 86/329 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDVALKEIQN---LIASDQ 525
+ K++ +G+ G V +G +G+ VAVK L + + ++E ++
Sbjct: 1 LTLGKKLGEGAFG-EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD 59
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HPN+V+ GV ++++ +Y+ +E Y+ G L ++ L
Sbjct: 60 HPNVVKLLGVCTEEEPLYIVME----------YMEGGDLLSYL--RKNRPKL-------- 99
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ LL I G+ +L IHRDL +N L+ ++
Sbjct: 100 ------------------SLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-- 139
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+SD G+S+ L D Y KL I
Sbjct: 140 VVKISDFGLSRDLYDD---------------DYYRKRGGKLPI----------------- 167
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLV 764
W APE L +G+ T D++S G +L+ T G+ PY S E +K+ L
Sbjct: 168 --RWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQP 225
Query: 765 EHIPEAV-DLFTRLLDPNPDLRPKAQNVL 792
+ P + DL + +P+ RP ++
Sbjct: 226 PNCPPELYDLMLQCWAEDPEDRPTFSELV 254
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 99.8 bits (247), Expect = 3e-22
Identities = 83/367 (22%), Positives = 131/367 (35%), Gaps = 90/367 (24%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVRW 532
+++ +GS G V L + + VA+K L K L+EIQ L + + PNIV+
Sbjct: 6 RKLGEGSFGEVYL--ARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKL 63
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
Y D+ +YL +E YV GS E+ L + L
Sbjct: 64 YDFFQDEGSLYLVME----------YVDGGSLEDLLKKIGRKGPL--------------- 98
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
++ L + I+S L +LH G+IHRD+KP+N+L+ +D KL D
Sbjct: 99 -----------SESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD-GRVVKLIDF 146
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++K L S + A + G+ G+ AP
Sbjct: 147 GLAKLLPDPGSTSSIPA-----------------------------LPSTSVGTPGYMAP 177
Query: 713 EQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV-------------K 756
E LL + + D++SLG L+ +TG GE +
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237
Query: 757 DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVEL 816
A DL +LL +P R + + L+H + S L D+ +
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDS 297
Query: 817 EDRESDS 823
Sbjct: 298 APLRLSL 304
|
Length = 384 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 95.6 bits (239), Expect = 8e-22
Identities = 75/329 (22%), Positives = 128/329 (38%), Gaps = 86/329 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKR-----LVKTHHDVALKEIQNLIASDQHPNIVRW 532
K+I KGS G V L +G+ +K + + + AL E++ ++ HPNI+++
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVK-ILKKLNHPNIIKY 64
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
Y ++ + + +E Y G +++ ++++ E +I
Sbjct: 65 YESFEEKGKLCIVME----------YADGGDLSQKIKKQKKEGKPFPEEQI--------- 105
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
L + L +LH ++HRD+KPQN+ ++ + KL D
Sbjct: 106 ----------------LDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL--VKLGDF 147
Query: 653 GISKRLQGDMSCL-TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
GISK L + T T YL +
Sbjct: 148 GISKVLSSTVDLAKTVVGTPY-----YL-------------------------------S 171
Query: 712 PEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHP-YGESFERDA-NIVKDRKDLFLVEHIP 768
PE L Q + D++SLGC+L+ T KHP GE+ A I+K + ++
Sbjct: 172 PE-LCQNKPYNYKSDIWSLGCVLYELCT-LKHPFEGENLLELALKILKGQYPPIPSQYSS 229
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
E +L + LL +P+ RP +L PF
Sbjct: 230 ELRNLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 2e-21
Identities = 70/329 (21%), Positives = 120/329 (36%), Gaps = 83/329 (25%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQH 526
+ K++ +G+ G V +G+ + VAVK L + + ++E ++ H
Sbjct: 1 LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
PNIV+ GV ++++ + + +E Y+ G + L
Sbjct: 61 PNIVKLLGVCTEEEPLMIVME----------YMPGGDLLDYL------------------ 92
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
+ EL + LL I G+ +L IHRDL +N L+ ++
Sbjct: 93 ---RKNRPKEL------SLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--V 141
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+SD G+S+ L D Y KL I
Sbjct: 142 VKISDFGLSRDLYDD---------------DYYKVKGGKLPI------------------ 168
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVE 765
W APE L +G+ T D++S G +L+ T G+ PY S +K L
Sbjct: 169 -RWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPP 227
Query: 766 HIPEAV-DLFTRLLDPNPDLRPKAQNVLN 793
+ P + L + +P+ RP ++
Sbjct: 228 NCPPELYKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 2e-20
Identities = 80/340 (23%), Positives = 123/340 (36%), Gaps = 126/340 (37%)
Query: 506 VKTHHDVALKEIQNLIASD----------------QHPNIVRWYGVESDQDFVYLSLERC 549
KT VALK+I+ + +HPNIV+ V + +YL E C
Sbjct: 21 KKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80
Query: 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
L + G N ++ + QLL
Sbjct: 81 DMDLKKYLDKRPGPLSP------------NLIKSIMY--------------------QLL 108
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA 669
GL++ H ++HRDLKPQN+LI++D KL+D G+++ + T
Sbjct: 109 -------RGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFGLARAFGIPLRTYTHE- 158
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFS 728
V+ T+ Y +APE LL + + A+D++S
Sbjct: 159 -----------------VV------------TLWY-----RAPEILLGSKHYSTAVDIWS 184
Query: 729 LGCILFFCITGGKHP--YGES--------FE----------RDANIVKDRKDLF------ 762
+GCI ITG P G+S F+ + D K F
Sbjct: 185 VGCIFAEMITG--KPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPK 242
Query: 763 -LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L + +P E +DL +++L NP R A+ L HP+F
Sbjct: 243 DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 6e-20
Identities = 89/332 (26%), Positives = 133/332 (40%), Gaps = 97/332 (29%)
Query: 481 IAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQ------NLIASDQHPNIVR-W 532
+ KGS G V+L G+ A+K L K + KE++ N+++ HP IV+
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
Y + ++ +YL LE +L L +E R R
Sbjct: 60 YAFQ-TEEKLYLVLEYAPG--GELFSHL------------SKEGRFSEERARF------- 97
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ A +IV L +LH +G+I+RDLKP+N+L+ D KL+D
Sbjct: 98 -----YAA-------------EIVLALEYLHSLGIIYRDLKPENILLDADGH--IKLTDF 137
Query: 653 GISKRL-QGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G++K L T C G+ + A
Sbjct: 138 GLAKELSSEGSRTNT---------------------FC---------------GTPEYLA 161
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFER-DANIVKDRKDLFLVEHI-P 768
PE LL +A+D +SLG +L+ +T GK P Y E + I+KD L E + P
Sbjct: 162 PEVLLGKGYGKAVDWWSLGVLLYEMLT-GKPPFYAEDRKEIYEKILKD--PLRFPEFLSP 218
Query: 769 EAVDLFTRLLDPNPDLR---PKAQNVLNHPFF 797
EA DL + LL +P R A+ + HPFF
Sbjct: 219 EARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 7e-20
Identities = 88/340 (25%), Positives = 140/340 (41%), Gaps = 104/340 (30%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVK--RLVKTHHDVALKEIQ---NLIASDQHPNIVRW 532
+I G+ G V N + G +AVK R+ +KEI ++ +HPN+V++
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPK-TIKEIADEMKVLELLKHPNLVKY 64
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
YGVE ++ VY+ +E C+ G+ EE L +L+E IR+
Sbjct: 65 YGVEVHREKVYIFMEYCS----------GGTLEELLEHGR----ILDEHVIRVY------ 104
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ QLL+ GL++LH G++HRD+KP N+ + D + KL D
Sbjct: 105 ------------TLQLLE-------GLAYLHSHGIVHRDIKPANIFL--DHNGVIKLGDF 143
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G + +L+ N T M ++ L G+ + AP
Sbjct: 144 GCAVKLK-------NNTTTMGEEVQSLA------------------------GTPAYMAP 172
Query: 713 EQLLQGRQT---RAIDLFSLGCILFFCITGGKHPYGESFERDANIV-------------K 756
E + G+ RA D++SLGC++ T GK P+ E + + I+
Sbjct: 173 EVITGGKGKGHGRAADIWSLGCVVLEMAT-GKRPWSE-LDNEFQIMFHVGAGHKPPIPDS 230
Query: 757 DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ PE D R L+ +P RP A +L HPF
Sbjct: 231 LQLS-------PEGKDFLDRCLESDPKKRPTASELLQHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 7e-20
Identities = 90/335 (26%), Positives = 130/335 (38%), Gaps = 95/335 (28%)
Query: 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDV-----------ALKEIQNLIASDQHPN 528
I GS G+V L N G +AVK++ AL L+ QH N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
IV++ G D D + + LE YV GS LN + E +R
Sbjct: 68 IVQYLGSSLDADHLNIFLE----------YVPGGSVAALLN----NYGAFEETLVR---- 109
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
R I+ GL++LH G+IHRD+K N+L+ D K
Sbjct: 110 ---------------------NFVRQILKGLNYLHNRGIIHRDIKGANILV--DNKGGIK 146
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+SD GISK+L+ + N LQ GS
Sbjct: 147 ISDFGISKKLEANSLSTKTNGARPSLQ-----------------------------GSVF 177
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES------FERDANIVKDRKDLF 762
W APE + Q TR D++SLGC++ +T GKHP+ + F+ N +
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLT-GKHPFPDCTQLQAIFKIGENASPE----- 231
Query: 763 LVEHIP-EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ +I EA+D + + + + RP A +L HPF
Sbjct: 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 8e-20
Identities = 91/340 (26%), Positives = 136/340 (40%), Gaps = 93/340 (27%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVAL-KEIQ------NLI 521
R GKL + +G+ G V L + + GR +AVK++ KE+ L+
Sbjct: 5 RRGKL------LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLL 58
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+ QH IV++YG D + + + +E Y+ GS ++QL A L E
Sbjct: 59 KNLQHERIVQYYGCLRDDETLSIFME----------YMPGGSVKDQLKA----YGALTET 104
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
R K TR I+ G+ +LH ++HRD+K N+L +
Sbjct: 105 VTR-------------------------KYTRQILEGVEYLHSNMIVHRDIKGANIL--R 137
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
D + KL D G SKRLQ C + TGM K V
Sbjct: 138 DSAGNVKLGDFGASKRLQ--TICSSG--TGM------------KSVT------------- 168
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVKDR 758
G+ W +PE + R D++S+GC + +T K P+ E FE A I
Sbjct: 169 ---GTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT-EKPPWAE-FEAMAAIFKIATQP 223
Query: 759 KDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ L H+ P+A + R N RP A+ +L H F
Sbjct: 224 TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|188875 cd09769, Luminal_IRE1, The Luminal domain, a dimerization domain, of the Serine/Threonine protein kinase, Inositol-requiring protein 1 | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 6e-19
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 15/187 (8%)
Query: 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVD-EDWELYF 107
D+ LV+ +DG +H VD K GKI WS P+ + V+ D LY
Sbjct: 2 DLLLVSTVDGGLHAVDRKTGKILWSLKAEDPLVEV-PHHSTLSIDGPTFIVEPRDGSLYV 60
Query: 108 HSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSA 167
+ +KKL + + ++ P S DG + G+ +T+ + VD ++G + +
Sbjct: 61 LNPGNEGLKKLPFTIPQLVQSSPCRSSDGILYTGSKQTTWYTVDPRTGEKIQVLGSGGAD 120
Query: 168 STPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227
S V P D + S +YI RT+Y + + E +WNV
Sbjct: 121 SN-----CPESCVDPDDDEQSECSS--------SSTIYIGRTEYTVTIYDSKTREPIWNV 167
Query: 228 AYADFKA 234
Y+D+
Sbjct: 168 TYSDYTP 174
|
The Luminal domain is a dimerization domain present in Inositol-requiring protein 1 (IRE1), a serine/threonine protein kinase (STK) and a type I transmembrane protein that is localized in the endoplasmic reticulum (ER). IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is a kinase receptor that also contains an endoribonuclease domain in the cytoplasmic side. It plays roles in the signaling of the unfolded protein response (UPR), which is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. IRE1 acts as an ER stress sensor and is the oldest and most conserved component of the UPR in eukaryotes. During ER stress, IRE1 dimerizes through its luminal domain and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and Xbp1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). IRE1alpha is expressed in all cells and tissues while IRE1beta is found only in intestinal epithelial cells. Length = 295 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 7e-19
Identities = 78/350 (22%), Positives = 121/350 (34%), Gaps = 130/350 (37%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ----------------NLIA 522
K + +GS+G V + T ALK+I L +
Sbjct: 7 KVLGQGSSGVV---------YKVRHK--PTGKIYALKKIHVDGDEEFRKQLLRELKTLRS 55
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+ P +V+ YG + + + LE Y+ GS L ++
Sbjct: 56 C-ESPYVVKCYGAFYKEGEISIVLE----------YMDGGS--------------LADLL 90
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISK 641
++ + E L + R I+ GL +LH +IHRD+KP N+LI+
Sbjct: 91 KKVGKIPEP---------------VLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS 135
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
K++D GISK L +D ++ G T
Sbjct: 136 KG--EVKIADFGISKVL----------ENTLDQCNTFV----------------G----T 163
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
V Y S PE++ + A D++SLG L C GK P+ + +
Sbjct: 164 VTYMS-----PERIQGESYSYAADIWSLGLTLLECAL-GKFPF---------LPPGQPSF 208
Query: 762 F-LVEHI--------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
F L++ I PE D + L +P RP A +L HPF
Sbjct: 209 FELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 78/354 (22%), Positives = 135/354 (38%), Gaps = 113/354 (31%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRL-VKTHHD----VALKEIQNLIASDQHPNIVRWYG 534
I +G++G V + E G +VA+K++ ++ AL+EI+ L A QHP +V+
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLD 66
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V L +E L++++ ++++ L
Sbjct: 67 VFPHGSGFVLVMEYMPSDLSEVL-------------RDEERPL----------------- 96
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
P AQ+ R ++ G++++H G++HRDLKP N+LIS D K++D G+
Sbjct: 97 ---------PEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADFGL 145
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ + L ++ + ++APE
Sbjct: 146 ARLFSEEEPRL----------------------------------YSHQVATRWYRAPEL 171
Query: 715 LLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGES----------------------FER- 750
L R+ +DL+++GCI + G GE+
Sbjct: 172 LYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSL 231
Query: 751 -DANIV--KDRKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D N + + K + L E P EA+DL LL +P R A L HP+F
Sbjct: 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 1e-18
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 36/189 (19%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
IV L +LH G+IHRDLKP N+LI + KL+D G+SK + D
Sbjct: 102 IVLALEYLHSNGIIHRDLKPDNILIDSNGHL--KLTDFGLSKVGLVRRQINLNDDEKEDK 159
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
++V G+ + APE +L ++ +D +SLGCIL+
Sbjct: 160 RIV---------------------------GTPDYIAPEVILGQGHSKTVDWWSLGCILY 192
Query: 735 FCITGGKHPYGESFERD--ANIVKDRKD-LFLVEHIPEAVDLFTRLLDPNPDLRPKA--- 788
+ G P+ + NI+ + + VE EA+DL ++LL P+P+ R A
Sbjct: 193 EFLV-GIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSI 251
Query: 789 QNVLNHPFF 797
+ + NHPFF
Sbjct: 252 EEIKNHPFF 260
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|199216 cd10321, RNase_Ire1_like, RNase domain (also known as the kinase extension nuclease domain) of Ire1 and RNase L | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-18
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 803 RLSFLRDVSDRVELEDRESDSKLLRALEGI----ALVALNGKWDEKMETKFIENIGRYRR 858
++ F+ V + ++ + S L + L + L+ W+ ++ ++++ + R
Sbjct: 3 KIQFIDAVLNLLKDSN-LPPSTLNKLLNPGSDTVSSSFLSKPWNTLIDKNLMDDLSNFVR 61
Query: 859 --YKYDNVRDLLRVIRNKSNHFRE----LPQDIQELLG--SHPEGFYNYFSCRFPKLLIE 910
Y YD V+DL+R IRN H +E LP+ +E+L + F+NYF RFP LLI
Sbjct: 62 RTYNYDQVKDLIRCIRNTIQHHKEIKNQLPEKNKEILESLKSQDSFFNYFESRFPNLLIF 121
Query: 911 VYN 913
+Y
Sbjct: 122 LYY 124
|
This RNase domain is found in the multi-functional protein Ire1; Ire1 also contains a type I transmembrane serine/threonine protein kinase (STK) domain, and a Luminal dimerization domain. Ire1 is essential for the endoplasmic reticulum (ER) unfolded protein response (UPR). The UPR is activated when protein misfolding is detected in the ER in order to reduce the synthesis of new proteins and increase the capacity of the ER to cope with the stress. IRE1 acts as an ER stress sensor; IRE1 dimerizes through its N-terminal luminal domain and forms oligomers, promoting trans-autophosphorylation by its cytosolic kinase domain which stimulates its endoribonuclease (RNase) activity and results in the cleavage of its mRNA substrate, Hac1 in yeast and Xbp1 in metazoans, thus promoting a splicing event that enables translation into a transcription factor which activates the UPR. This RNase domain is also found in Ribonuclease L (RNase L), sometimes referred to as the 2-5A-dependent RNase. RNase L is a highly regulated, latent endoribonuclease widely expressed in most mammalian tissues. It is involved in the mediation of the antiviral and pro-apoptotic activities of the interferon-inducible 2-5A system; the interferon (IFN)-inducible 2'-5'-oligoadenylate synthetase (OAS)/RNase L pathway blocks infections by certain types of viruses through cleavage of viral and cellular single-stranded RNA. RNase L has been shown to have an impact on the pathogenesis of prostate cancer; the RNase L gene, RNASEL, has been identified as a strong candidate for the hereditary prostate cancer 1 (HPC1) allele. Length = 127 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 85.6 bits (213), Expect = 2e-18
Identities = 73/323 (22%), Positives = 121/323 (37%), Gaps = 85/323 (26%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASDQ 525
+ K++ +G+ G V +G VAVK L + + L+E +
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS- 59
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HPNIVR GV + + +Y+ E Y+ G + L ++ L
Sbjct: 60 HPNIVRLLGVCTQGEPLYIVTE----------YMPGGDLLDFL--RKHGEKL-------- 99
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
LL++ I G+ +L +HRDL +N L++++
Sbjct: 100 ------------------TLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENL-- 139
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+SD G+S+ + D Y KL I
Sbjct: 140 VVKISDFGLSRDIYEDDY--------------YRKRGGGKLPIK---------------- 169
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLV 764
W APE L G+ T D++S G +L+ T G+ PY G S E +++D L
Sbjct: 170 ---WMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRP 226
Query: 765 EHIPEAV-DLFTRLLDPNPDLRP 786
E+ P+ + +L + +P+ RP
Sbjct: 227 ENCPDELYELMLQCWAYDPEDRP 249
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 2e-18
Identities = 73/325 (22%), Positives = 117/325 (36%), Gaps = 74/325 (22%)
Query: 479 KEIAKGSNGTV----VLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIA---SDQHPNIVR 531
K++ +G+ G V + + + VAVK L + + K+ HPN+VR
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
GV ++++ +YL LE Y+ G +LL+ +R
Sbjct: 61 LLGVCTEEEPLYLVLE----------YMEGG-------------DLLDYLRKSRPVFPSP 97
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
K LL I G+ +L +HRDL +N L+ +D K+SD
Sbjct: 98 EKST-------LSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKISD 148
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+S+ + D Y KL I W A
Sbjct: 149 FGLSRDVYDD--------------DYYRKKTGGKLPI-------------------RWMA 175
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEA 770
PE L G T D++S G +L+ T G PY S E ++ L E+ P+
Sbjct: 176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDE 235
Query: 771 V-DLFTRLLDPNPDLRPKAQNVLNH 794
+ +L +P+ RP ++
Sbjct: 236 LYELMLSCWQLDPEDRPTFSELVER 260
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 88/355 (24%), Positives = 133/355 (37%), Gaps = 110/355 (30%)
Query: 480 EIAKGSNGTVVLEGN-YEGRSVAVKRL-VKTHHD----VALKEIQNL--IASDQHPNIVR 531
EI +G+ GTV + GR VA+K++ V + L+EI L + S +HPNIVR
Sbjct: 6 EIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVR 65
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
V +R L V FE +QD L +
Sbjct: 66 LLDV-----CHGPRTDREL----KLTLV----FEHV----DQD----------LATYLSK 98
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
G P + + R ++ G+ LH ++HRDLKPQN+L++ D K++D
Sbjct: 99 CP------KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQV--KIAD 150
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ +M+ + V T+ Y +A
Sbjct: 151 FGLARIYSFEMA------------------------LTSVV-------VTLWY-----RA 174
Query: 712 PEQLLQGRQTRAIDLFSLGCI---------LF------------FCITG----GKHPYGE 746
PE LLQ +D++S+GCI LF F + G + P
Sbjct: 175 PEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234
Query: 747 SFERDA---NIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
S R + + K V I E +DL ++L NP R A L HP+F
Sbjct: 235 SLPRSSFPSYTPRSFKS--FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 2e-17
Identities = 84/338 (24%), Positives = 129/338 (38%), Gaps = 97/338 (28%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALKEIQNLIASD-------QHP 527
I KG+ G V L N G +AVK + HD K++ + S+ H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NIV++ G E+ ++++ + LE G FEEQL +R
Sbjct: 69 NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQL--------------VRFF- 113
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
T ++ GL++LH G++HRDLK N+L+ D C
Sbjct: 114 ------------------------TEQVLEGLAYLHSKGILHRDLKADNLLVDAD-GIC- 147
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+SD GISK+ + N M +Q GS
Sbjct: 148 KISDFGISKKSDD----IYDNDQNMSMQ-----------------------------GSV 174
Query: 708 GWQAPEQL-LQGRQTRA-IDLFSLGCILFFCITGGKHPYG--ESFERDANIVKDRKDLFL 763
W APE + + A +D++SLGC++ + G+ P+ E+ + R +
Sbjct: 175 FWMAPEVIHSYSQGYSAKVDIWSLGCVVLE-MFAGRRPWSDEEAIAAMFKLGNKRSAPPI 233
Query: 764 VEHI-----PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ P A+D NPD RP A+ +L HPF
Sbjct: 234 PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 4e-17
Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 96/338 (28%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIA-------SDQHPNIV 530
K I+KG+ G+V L + G A+K L K+ A ++ N+ A + P +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-AKNQVTNVKAERAIMMIQGESPYVA 60
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ Y +D++YL +E Y+ G L+ +
Sbjct: 61 KLYYSFQSKDYLYLVME----------YLNGGDCAS------------------LIKTL- 91
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
G P + ++V G+ LH+ G+IHRD+KP+N+LI D++ KL+
Sbjct: 92 ----------GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI--DQTGHLKLT 139
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+S+ + K + G+ +
Sbjct: 140 DFGLSR-----------------------NGLENKKFV----------------GTPDYL 160
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRKDL--FLVEHI 767
APE +L + D +SLGC++F + G + E+ + NI+ R + + E
Sbjct: 161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFC 220
Query: 768 -PEAVDLFTRLLDPNPDLRPKA---QNVLNHPFFWTAD 801
PEAVDL RLL +P R A Q + +HPFF + +
Sbjct: 221 SPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-----QGDMSCLTQNA 669
+V L +H++G IHRD+KP N+LI D KL+D G+ K++ + + N
Sbjct: 110 LVLALDSVHKLGFIHRDIKPDNILIDADGHI--KLADFGLCKKMNKAKDREYYLNDSHNL 167
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
D LV + V TV G+ + APE L D +SL
Sbjct: 168 LFRDNVLVRRRDHKQRRVRA---------NSTV--GTPDYIAPEVLRGTPYGLECDWWSL 216
Query: 730 GCILFFCITGGKHPYGESFERDAN-IVKDRKDLFLVEHI---PEAVDLFTRLLDPNPDLR 785
G IL+ + G Y ++ + N I+ ++ L PEA+DL RLL D
Sbjct: 217 GVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRL 276
Query: 786 PKAQNVLNHPFF----WTADTRLS--FLRDVSD 812
+ + +HPFF W F+ ++S
Sbjct: 277 GSFEEIKSHPFFKGIDWENLRETKPPFVPELSS 309
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 1e-16
Identities = 79/336 (23%), Positives = 126/336 (37%), Gaps = 100/336 (29%)
Query: 481 IAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQ-------HPNIVRW 532
+ G G V L + + R+ A+K VK H V Q I S++ HP IV+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKC-VKKRHIVETG-QQEHIFSEKEILEECNHPFIVKL 58
Query: 533 YGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
Y D+ ++Y+ +E C L ++ +D L +E
Sbjct: 59 YRTFKDKKYIYMLMEYCLGGELWTIL---------------RDRGLFDE----------- 92
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+A+ +V +LH G+I+RDLKP+N+L+ D + KL D
Sbjct: 93 ------------YTARFY--IACVVLAFEYLHNRGIIYRDLKPENLLL--DSNGYVKLVD 136
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G +K+L+ T C G+ + A
Sbjct: 137 FGFAKKLKSGQKTWT---------------------FC---------------GTPEYVA 160
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHI 767
PE +L ++D +SLG +L+ +TG P+GE E +I+K L +I
Sbjct: 161 PEIILNKGYDFSVDYWSLGILLYELLTGRP-PFGEDDEDPMEIYNDILKGNGKLEFPNYI 219
Query: 768 -PEAVDLFTRLLDPNPDLRPKAQN-----VLNHPFF 797
A DL +LL NP+ R + H +F
Sbjct: 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 85/337 (25%), Positives = 128/337 (37%), Gaps = 114/337 (33%)
Query: 497 GRSVAVKRLVKTHHDVA----LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552
G+ A+K + K + L+EIQ L HPNI+R + ++ +R T
Sbjct: 24 GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRL------IEVLF---DRKTGR 74
Query: 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612
L L++ L D NL ++ R P+ E ++ QLLK
Sbjct: 75 LA-LVFEL------------MDMNLYELIKGRKRPLPEKRVKSYMY--------QLLK-- 111
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGM 672
L H+H G+ HRD+KP+N+LI D KL+D G SC
Sbjct: 112 -----SLDHMHRNGIFHRDIKPENILIKDD---ILKLADFG---------SC-------- 146
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLL-QGRQTRAIDLFSLG 730
I K E Y S+ W +APE LL G +D++++G
Sbjct: 147 -------RGIYSKPPYTE-------------YISTRWYRAPECLLTDGYYGPKMDIWAVG 186
Query: 731 CILFFCIT-----GGKH--------------PYGE-------SFERDANIVKDRKDLFLV 764
C+ F ++ G + P E S + N +K L
Sbjct: 187 CVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPS-KKGTGLR 245
Query: 765 EHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ +P E +DL +LL +PD R A+ L HP+F
Sbjct: 246 KLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 4e-16
Identities = 86/374 (22%), Positives = 145/374 (38%), Gaps = 112/374 (29%)
Query: 452 EKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTV-VLEGNYEGRSVAVK--RLVKT 508
E+ D++ + G K I +G++G V G+ VA+K RL K
Sbjct: 2 EELKAALKDIVSE---GDPRELYKNLEK-IGEGASGEVYKATDRATGKEVAIKKMRLRKQ 57
Query: 509 HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQL 568
+ ++ + EI ++ +HPNIV +Y D +++ +E Y+ GS + +
Sbjct: 58 NKELIINEIL-IMKDCKHPNIVDYYDSYLVGDELWVVME----------YMDGGSLTDII 106
Query: 569 NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628
+NE Q+ V R+++ GL +LH +I
Sbjct: 107 TQNFVR---MNE-------------------------PQIAYVCREVLQGLEYLHSQNVI 138
Query: 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688
HRD+K N+L+SKD S KL+D G + +L + +
Sbjct: 139 HRDIKSDNILLSKDGS--VKLADFGFAAQL----TKEKSKRNSV---------------- 176
Query: 689 CECVFQFGVLFFTVG--YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746
VG Y W APE + + +D++SLG I+ + G+ PY
Sbjct: 177 -------------VGTPY----WMAPEVIKRKDYGPKVDIWSLG-IMCIEMAEGEPPY-- 216
Query: 747 SFERDANIVKDR--KDLFLV--EHIP----------EAVDLFTRLLDPNPDLRPKAQNVL 792
+++ + LFL+ + IP E D + L +P+ RP A+ +L
Sbjct: 217 --------LREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268
Query: 793 NHPFFWTADTRLSF 806
HPF A + F
Sbjct: 269 QHPFLKKACPKEEF 282
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 7e-16
Identities = 77/357 (21%), Positives = 133/357 (37%), Gaps = 116/357 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
+I +G+ G V + G VA+K++ AL+EI+ L+ HPNI++
Sbjct: 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIK-LLKELNHPNIIKL 63
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + +YL E D++L ++ R + E+
Sbjct: 64 LDVFRHKGDLYLVFEFM------------------------DTDLYKLIKDRQRGLPESL 99
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
L+ QLL+ GL+ H G++HRDLKP+N+LI+ + KL+D
Sbjct: 100 IKSYLY--------QLLQ-------GLAFCHSHGILHRDLKPENLLINTEGVL--KLADF 142
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QA 711
G+++ + T Y + W +A
Sbjct: 143 GLARSFGSPVRPYTH------------------------------------YVVTRWYRA 166
Query: 712 PEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------------PYG 745
PE LL + + +D++S+GCI ++ GK P
Sbjct: 167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226
Query: 746 ESFERDANI-VKDRKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
S R+ + + L + P +A+DL +++L +P R A+ L HP+F
Sbjct: 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 111/337 (32%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRL-VKTHHDVALKEIQNLIASDQHPNIVRWYGVESD 538
+ +GS G+V + E G+ VA+K + V+ +KEI L D P IV++YG
Sbjct: 11 LGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCD-SPYIVKYYGSYFK 69
Query: 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597
+++ +E C S++D++ + + + E+
Sbjct: 70 NTDLWIVMEYCGAGSVSDIMKITNKTLTEE------------------------------ 99
Query: 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
++ + + GL +LH IHRD+K N+L++++ AKL+D G+S +
Sbjct: 100 ---------EIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQ--AKLADFGVSGQ 148
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ 717
L M+ VI G+ W APE + +
Sbjct: 149 LTDTMA-------------------KRNTVI----------------GTPFWMAPEVIQE 173
Query: 718 GRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFLVEHIP---- 768
D++SLG IT GK PY + + + +F++ + P
Sbjct: 174 IGYNNKADIWSLG------ITAIEMAEGKPPYSD--------IHPMRAIFMIPNKPPPTL 219
Query: 769 --------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
E D + L +P+ RP A +L HPF
Sbjct: 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 3e-15
Identities = 84/360 (23%), Positives = 128/360 (35%), Gaps = 110/360 (30%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIV 530
K I G+ G V GR VA+K++ D+ L+EI+ L+ +H NI+
Sbjct: 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIK-LLRHLRHENII 62
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ S E ND +Y+++ E L+ + L + I+
Sbjct: 63 GLLDI-----LRPPSPE----DFND-VYIVTELMETDLHKVIKSPQPLTDDHIQYF---- 108
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC-AKL 649
Q+L+ GL +LH +IHRDLKP N+L++ + C K+
Sbjct: 109 --------------LYQILR-------GLKYLHSANVIHRDLKPSNILVNSN---CDLKI 144
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
D G++ R T Y+V T Y
Sbjct: 145 CDFGLA-RGVDPDEDEKGFLTE------YVV--------------------TRWY----- 172
Query: 710 QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PYGE--S 747
+APE LL + T+AID++S+GCI +T G+ P E
Sbjct: 173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232
Query: 748 FERDANIVKDRKDLFLVEHIP----------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F K L P EA+DL ++L +P R A L HP+
Sbjct: 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 3e-15
Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 89/276 (32%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASD------QHPN 528
+ I KG G V + G+Y G+ VAVK L K Q +A +HPN
Sbjct: 8 LKLGATIGKGEFGDV-MLGDYRGQKVAVKCL-KDD----STAAQAFLAEASVMTTLRHPN 61
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+V+ GV + +Y+ E Y+ G +L++ +R R V
Sbjct: 62 LVQLLGVVLQGNPLYIVTE----------YMAKG-------------SLVDYLRSRGRAV 98
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ AQ L D+ G+ +L E +HRDL +NVL+S+D AK
Sbjct: 99 IT--------------LAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED--LVAK 142
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+SD G++K + Q +G KL +
Sbjct: 143 VSDFGLAKE-----ASQGQ-DSG-------------KLPV-------------------K 164
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L + + + D++S G +L+ + G+ PY
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 7e-15
Identities = 75/335 (22%), Positives = 130/335 (38%), Gaps = 94/335 (28%)
Query: 477 FNKEIAKGSNGTV-VLEGNYEGRSVAVKRLVKTHHDVALKEIQN------LIASDQHPNI 529
+ I KG+ G V +++ + A+K + K V ++N ++ HP +
Sbjct: 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFL 62
Query: 530 VR-WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
V WY + D++ +YL + DL+ L G L+ K + +E +++
Sbjct: 63 VNLWYSFQ-DEENMYLVV--------DLL--LGGDLRYHLSQKVK----FSEEQVKFWIC 107
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+IV L +LH G+IHRD+KP N+L+ D+
Sbjct: 108 -------------------------EIVLALEYLHSKGIIHRDIKPDNILL--DEQGHVH 140
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D I+ ++ D T G+ G
Sbjct: 141 ITDFNIATKVTPD-----TLTTSTS-------------------------------GTPG 164
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIV---KDRKDLFLV 764
+ APE L + + A+D +SLG + C+ GK PY G S I + L+
Sbjct: 165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLR-GKRPYRGHSRTIRDQIRAKQETADVLYPA 223
Query: 765 EHIPEAVDLFTRLLDPNPDLR--PKAQNVLNHPFF 797
EA+D +LL+ +P R +++ NHP+F
Sbjct: 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 9e-15
Identities = 74/344 (21%), Positives = 116/344 (33%), Gaps = 115/344 (33%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALK--------EIQNLIASD------ 524
E+ G++G V T +A+K IQ I +
Sbjct: 7 GELGAGNSGVVSK-----------VLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK 55
Query: 525 -QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
P IV +YG + + + +E GS ++ +L EV+
Sbjct: 56 CNSPYIVGFYGAFYNNGDISICMEYMDG----------GSLDK----------ILKEVQG 95
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKD 642
R+ P L K+ ++ GL++LHE +IHRD+KP N+L++
Sbjct: 96 RI------------------PERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR 137
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
KL D G+S +L + F
Sbjct: 138 GQI--KLCDFGVSGQLVNSL--------AKT--------------------------FV- 160
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-------FERDANIV 755
G+S + APE++ + D++SLG L T G+ PY FE IV
Sbjct: 161 --GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT-GRFPYPPENDPPDGIFELLQYIV 217
Query: 756 KDRKDLFLVEHI--PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ L P+ D L +P RP + +L HPF
Sbjct: 218 NEPPPR-LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 2e-14
Identities = 89/354 (25%), Positives = 136/354 (38%), Gaps = 138/354 (38%)
Query: 501 AVKRLVKTHHDVALKEI----QNLIASD---------------QHPNIVRWYGV---ESD 538
A+ R +T VALK+I +N A+D HPNIV+ V E+D
Sbjct: 26 AIDR--RTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81
Query: 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELW 598
+D +YL E L+ +I +N+L +V R + ++
Sbjct: 82 KD-IYLVFEYMETDLHAVI----------------RANILEDVHKRYI----------MY 114
Query: 599 KANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC-AKLSDMGISKR 657
QLLK + I SG +IHRDLKP N+L++ D C KL+D G+++
Sbjct: 115 --------QLLKALKYIHSG-------NVIHRDLKPSNILLNSD---CRVKLADFGLARS 156
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLL 716
L S L +N L Y ++ W +APE LL
Sbjct: 157 L----SELEENPENPVL---------------------------TDYVATRWYRAPEILL 185
Query: 717 QGRQ-TRAIDLFSLGCILFFCITGG------------------------------KHPYG 745
+ T+ +D++S+GCIL + G K P+
Sbjct: 186 GSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFA 245
Query: 746 ESFERDANIVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + RK L L + +A+DL +LL NP+ R A+ L HP+
Sbjct: 246 ATMLDSLP-SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 3e-14
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 85/329 (25%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLV--KTHHDVALKEIQ------NLIASDQHPNIVRW 532
+ KG+ GTV +G+ +AVK++ ++ A KE + +L+ S +H NIV++
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G L+ T S+ + +V GS LN R P+
Sbjct: 68 LGT---------CLDDNTISIF-MEFVPGGSISSILN--------------RFGPL---- 99
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
P K T+ I+ G+++LH ++HRD+K NV++ + KL D
Sbjct: 100 -----------PEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLIDF 146
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G ++RL + + + T ++ LK + +G+ W AP
Sbjct: 147 GCARRL----AWVGLHGTHSNM---------LKSM----------------HGTPYWMAP 177
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE--- 769
E + + R D++S+GC +F TG P S +R A + L+ +P+
Sbjct: 178 EVINESGYGRKSDIWSIGCTVFEMATG--KPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235
Query: 770 --AVDLFTRLLDPNPDLRPKAQNVLNHPF 796
A+D T L + RP A +L H F
Sbjct: 236 AAAIDFVTSCLTRDQHERPSALQLLRHDF 264
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 4e-14
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
G P A+ + I+ GL HLH+ +++RDLKP+NVL+ + ++SD+G++ L+G
Sbjct: 91 GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN--VRISDLGLAVELKGG 148
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY-GSSGWQAPEQLLQGRQ 720
G G+ G+ APE L
Sbjct: 149 KK-------------------------------------IKGRAGTPGYMAPEVLQGEVY 171
Query: 721 TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI-------PEAVDL 773
++D F+LGC L+ I G+ P+ + E+ ++ K L + PEA DL
Sbjct: 172 DFSVDWFALGCTLYEMIA-GRSPFRQRKEKVEK--EELKRRTLEMAVEYPDKFSPEAKDL 228
Query: 774 FTRLLDPNPDLR-----PKAQNVLNHPFFWTADTRLSFL 807
LL +P+ R A V HP F + R
Sbjct: 229 CEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEA 267
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 4e-14
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 47/190 (24%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIASDQ---HPNIVRWYG 534
+ I G+ G V + G VA+K ++K + IQ I+ + HPNIV ++G
Sbjct: 9 QRIGSGTYGDVYKARDIATGELVAIK-VIKLEPGDDFEIIQQEISMLKECRHPNIVAYFG 67
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+D +++ +E C SL D+ V G E
Sbjct: 68 SYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSEL-------------------------- 101
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+ V R+ + GL++LHE G IHRD+K N+L+++D KL+D G
Sbjct: 102 -------------QIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKLADFG 146
Query: 654 ISKRLQGDMS 663
+S +L ++
Sbjct: 147 VSAQLTATIA 156
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|197798 smart00580, PUG, domain in protein kinases, N-glycanases and other nuclear proteins | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 6e-14
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 864 VRDLLRVIRNKSNHFREL--PQDIQELLGSHPEGFYNYFSCRFPKLLI-EVYNVI 915
VRDLLR +RN +H RE I+E LG P GF YF+ FP+LLI EVY +
Sbjct: 2 VRDLLRALRNILHHPREEKGNPAIKERLGPVPGGFELYFTVGFPRLLISEVYTLP 56
|
Length = 57 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 7e-14
Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 61/228 (26%)
Query: 604 PSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDM 662
P L K+ IV L +LH + +IHRD+KP NVLI+++ KL D GIS
Sbjct: 101 PEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQV--KLCDFGISG------ 152
Query: 663 SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQL-----LQ 717
YLV + K T+ G + APE++ +
Sbjct: 153 ---------------YLVDSVAK---------------TIDAGCKPYMAPERINPELNQK 182
Query: 718 GRQTRAIDLFSLGCILFFCITGGKHPY---GESFERDANIVKDR-----KDLFLVEHIPE 769
G ++ D++SLG I + G+ PY F++ +V++ + F PE
Sbjct: 183 GYDVKS-DVWSLG-ITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKF----SPE 236
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
D + L N RP +L HPFF ++ + DV+ V L
Sbjct: 237 FQDFVNKCLKKNYKERPNYPELLQHPFFELHLSKNT---DVASFVSLI 281
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 1e-13
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 65/227 (28%)
Query: 600 ANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659
P+ + ++ G++H H+ G++HRDLKPQN+L+ K K K++D+G+ +
Sbjct: 104 GRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLL-KIADLGLGRAF- 161
Query: 660 GDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR 719
SI +K E V T+ Y +APE LL
Sbjct: 162 ---------------------SIPVKSYTHEIV--------TLWY-----RAPEVLLGST 187
Query: 720 Q-TRAIDLFSLGCILFFCITGGKHPYGES-FERDANI--------------VKDRKDL-- 761
+ +D++S+GCI G+S ++ +I V +D
Sbjct: 188 HYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE 247
Query: 762 ----------FLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
V + PE +DL ++L +P R A+ L HP+F
Sbjct: 248 FPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 83/343 (24%), Positives = 129/343 (37%), Gaps = 121/343 (35%)
Query: 497 GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIV--RWYGVESDQDFVYLSLERC 549
G VA+K+L +L+EI L+ QHPNIV + V S+ D +Y+ +E
Sbjct: 30 GEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVMEYV 88
Query: 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
L L+ + F L +EV+ +L QLL
Sbjct: 89 EHDLKSLMETMKQPF------------LQSEVKCLML--------------------QLL 116
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA 669
SG++HLH+ ++HRDLK N+L++ K+ D G+++ + TQ
Sbjct: 117 -------SGVAHLHDNWILHRDLKTSNLLLN--NRGILKICDFGLAREYGSPLKPYTQL- 166
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-QGRQTRAIDLFS 728
V+ T+ Y +APE LL + AID++S
Sbjct: 167 -----------------VV------------TLWY-----RAPELLLGAKEYSTAIDMWS 192
Query: 729 LGCI---------LF------------FCITGGKHPYGESFERDANIVKDRKDLF----- 762
+GCI LF F + G P + + + + +K F
Sbjct: 193 VGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGT--PTEKIWPGFSELPGAKKKTFTKYPY 250
Query: 763 --LVEHIPE------AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L + P DL RLL +P R A++ L HP+F
Sbjct: 251 NQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 3e-13
Identities = 76/345 (22%), Positives = 118/345 (34%), Gaps = 125/345 (36%)
Query: 497 GRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVRWYGV--ESDQDFVYLSLER 548
G VA+K+ ++ ++ A++EI+ L+ +HPNIVR + + +Y+ E
Sbjct: 24 GELVALKK-IRMENEKEGFPITAIREIK-LLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81
Query: 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608
L L+ F E K QL
Sbjct: 82 MDHDLTGLLDSPEVKFTES-QIK-------------------------------CYMKQL 109
Query: 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG----ISKRLQGDMSC 664
L+ GL +LH G++HRD+K N+LI+ D KL+D G +KR D +
Sbjct: 110 LE-------GLQYLHSNGILHRDIKGSNILINNDGV--LKLADFGLARPYTKRNSADYT- 159
Query: 665 LTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-QGRQTRA 723
VI T+ Y + PE LL R
Sbjct: 160 --------------------NRVI------------TLWY-----RPPELLLGATRYGPE 182
Query: 724 IDLFSLGCILFFCITGG-------------------------------KHPYGESFERDA 752
+D++S+GCIL G K P+ E+ +
Sbjct: 183 VDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKK 242
Query: 753 NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ ++ F P A+DL +LL +P R A L H +F
Sbjct: 243 PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 8e-13
Identities = 90/370 (24%), Positives = 138/370 (37%), Gaps = 118/370 (31%)
Query: 484 GSNGTVVLEGNYE-GRSVAVKRLVKTH-HDV--ALKEIQNLIASDQHPNIVRWYGVESDQ 539
GSNG V + + + VAVK++V T V AL+EI+ +I H NIV+ Y V
Sbjct: 16 GSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIK-IIRRLDHDNIVKVYEVLGP- 73
Query: 540 DFVYLSLERCTCSLNDL-----IYVLSGSFEEQL-NAKEQDSNLLNEVRIRLLPVMENTK 593
S T + L +Y++ E L N EQ L+E RL
Sbjct: 74 -----SGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLF------- 119
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
QLL+ GL ++H ++HRDLKP NV I+ + K+ D G
Sbjct: 120 -----------MYQLLR-------GLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFG 160
Query: 654 ISKRLQGDMS---CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
+++ + S L++ + ++
Sbjct: 161 LARIVDPHYSHKGYLSEGLV-----------------------------------TKWYR 185
Query: 711 APEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH------------PYGESFERD- 751
+P LL T+AID+++ GCI +TG G H P +R+
Sbjct: 186 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNE 245
Query: 752 ------ANIVKD----RKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ + D R+ L L PEA+D ++L NP R A+ L HP+
Sbjct: 246 LLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM-- 303
Query: 800 ADTRLSFLRD 809
+ S D
Sbjct: 304 --SCYSCPFD 311
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 79/322 (24%), Positives = 126/322 (39%), Gaps = 82/322 (25%)
Query: 479 KEIAKGSNGTVVLEGNYEGR-SVAVK--RLVKTHHDVA--LKEIQNLIASDQHPNIVRWY 533
++I KG+ G V +G +G VAVK R L+E + L D HPNIV+
Sbjct: 1 EKIGKGNFGDV-YKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD-HPNIVKLI 58
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
GV + +Y+ +E V GS L +R
Sbjct: 59 GVCVQKQPIYIVME----------LVPGGSL-------------LTFLRK---------- 85
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
K N +LL+++ D +G+ +L IHRDL +N L+ ++ K+SD G
Sbjct: 86 -----KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVL--KISDFG 138
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+S+ +G + Y VS LK + + W APE
Sbjct: 139 MSREEEGGI---------------YTVSDGLKQIPIK------------------WTAPE 165
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV- 771
L GR T D++S G +L+ + G PY G S ++ ++ + + PE +
Sbjct: 166 ALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIY 225
Query: 772 DLFTRLLDPNPDLRPKAQNVLN 793
L + +P+ RP + N
Sbjct: 226 RLMLQCWAYDPENRPSFSEIYN 247
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-12
Identities = 81/340 (23%), Positives = 133/340 (39%), Gaps = 109/340 (32%)
Query: 480 EIAKGSNGTVVLEGNYE-GRSVAVKRLVK--------THHDVALKEIQNLIASDQHPNIV 530
++ +G G V L + G VA+KR+ K H + ++I + + + +V
Sbjct: 8 QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDI---LTTTKSEWLV 64
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ D +++YL++E YV G F LN +L+E R
Sbjct: 65 KLLYAFQDDEYLYLAME----------YVPGGDFRTLLNNL----GVLSEDHARFYMA-- 108
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
++ + LHE+G IHRDLKP+N LI D S KL+
Sbjct: 109 -----------------------EMFEAVDALHELGYIHRDLKPENFLI--DASGHIKLT 143
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+SK + + Y S++ GS +
Sbjct: 144 DFGLSKGI-----------------VTYANSVV---------------------GSPDYM 165
Query: 711 APEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDL--- 761
APE +L+G+ +D +SLGC+L+ + G G P E++E N+ ++ L
Sbjct: 166 APE-VLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-NETWE---NLKYWKETLQRP 220
Query: 762 ----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
EA DL T+L++ +++ NHPFF
Sbjct: 221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFF 260
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 2e-12
Identities = 88/333 (26%), Positives = 135/333 (40%), Gaps = 98/333 (29%)
Query: 481 IAKGSNGTVVLEGNYEGR------SVAVKRL-VKTHHDVA-LKEIQNLIASDQHPNIVRW 532
+ KG+ G V Y R +A+K + + V L E L + +H NIV++
Sbjct: 16 LGKGTYGIV-----YAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQY 70
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G +S+ F + +E+ V GS S LL R + P+ +N
Sbjct: 71 LGSDSENGFFKIFMEQ----------VPGGSL----------SALL---RSKWGPLKDNE 107
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ I + T+ I+ GL +LH+ ++HRD+K NVL++ K+SD
Sbjct: 108 QTIIFY-------------TKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVV-KISDF 153
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G SKRL G C T+ TG LQ + AP
Sbjct: 154 GTSKRLAGINPC-TETFTGT-LQ---------------------------------YMAP 178
Query: 713 EQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH--IP 768
E + +G + D++SLGC + T GK P+ E E A + K H IP
Sbjct: 179 EVIDKGPRGYGAPADIWSLGCTIVEMAT-GKPPFIELGEPQAAMFKVG---MFKIHPEIP 234
Query: 769 EAV-----DLFTRLLDPNPDLRPKAQNVLNHPF 796
E++ + R +P+PD R A ++L PF
Sbjct: 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-12
Identities = 77/340 (22%), Positives = 118/340 (34%), Gaps = 96/340 (28%)
Query: 477 FNKEIAKGSNGTVVL-----EGNYEGRSVAVKRL----VKTHHDVALKEIQNLIASDQHP 527
F K++ +G G V L G+ G VAVK L + H +EI+ L + H
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEIL-RTLDHE 66
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NIV++ GV L L + Y+ SGS + L + +D L
Sbjct: 67 NIVKYKGVCEKPGGRSLRLI--------MEYLPSGSLRDYLQ-RHRDQINL--------- 108
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+LL + I G+ +L IHRDL +N+L+ +
Sbjct: 109 ------------------KRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LV 148
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+SD G++K L D G + +
Sbjct: 149 KISDFGLAKVLPEDKDYYYVKEPG----------------------ESPIF--------- 177
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG---KHPYGESF-----ERDANIV---- 755
W APE L + + A D++S G L+ T G + P E + IV
Sbjct: 178 -WYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236
Query: 756 ---KDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQNV 791
K+ + L P+ V DL + P RP ++
Sbjct: 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 3e-12
Identities = 77/346 (22%), Positives = 119/346 (34%), Gaps = 130/346 (37%)
Query: 497 GRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548
GR VA+K++ + AL+EI+ L+ +HPNI+ V + + L E
Sbjct: 25 GRIVAIKKIKLGERKEAKDGINFTALREIK-LLQELKHPNIIGLLDVFGHKSNINLVFE- 82
Query: 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608
+ E+ ++ + I L P DI+ +
Sbjct: 83 ----------FMETDLEK----------VIKDKSIVLTP-----ADIKSY------MLMT 111
Query: 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQN 668
L+ GL +LH ++HRDLKP N+LI+ D KL+D G+++ +T
Sbjct: 112 LR-------GLEYLHSNWILHRDLKPNNLLIASDG--VLKLADFGLARSFGSPNRKMTHQ 162
Query: 669 ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLF 727
T Y +APE L R +D++
Sbjct: 163 V------------------------------VTRWY-----RAPELLFGARHYGVGVDMW 187
Query: 728 SLGCIL--------FFCITGGKHPYGES--------F-------ERDANIVKDRKDLFLV 764
S+GCI F G+S F E + V D
Sbjct: 188 SVGCIFAELLLRVPFL--------PGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF 239
Query: 765 EHIP-------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ P +A+DL RLL NP+ R A+ L HP+F
Sbjct: 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 4e-12
Identities = 87/329 (26%), Positives = 136/329 (41%), Gaps = 84/329 (25%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLV------KTHHDVALKEIQ-NLIASDQHPNIV 530
K + +G+ G V L + + GR +A K++ +T +V+ E + L+ + QH IV
Sbjct: 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV 67
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
++YG D+ L++ + Y+ GS ++QL A L E R
Sbjct: 68 QYYGCLRDRAEKTLTIF--------MEYMPGGSVKDQLKA----YGALTESVTR------ 109
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
K TR I+ G+S+LH ++HRD+K N+L +D + KL
Sbjct: 110 -------------------KYTRQILEGMSYLHSNMIVHRDIKGANIL--RDSAGNVKLG 148
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G SKRLQ + + TG+ S+ G+ W
Sbjct: 149 DFGASKRLQ----TICMSGTGIR-------SVT---------------------GTPYWM 176
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK---DRKDLFLVEHI 767
+PE + R D++SLGC + +T K P+ E +E A I K + L HI
Sbjct: 177 SPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAE-YEAMAAIFKIATQPTNPQLPSHI 234
Query: 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E F + RP A+ +L HPF
Sbjct: 235 SEHARDFLGCIFVEARHRPSAEELLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 3e-11
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 51/204 (25%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
A ++ T ++ GLS+LHE +IHRD+K N+LI +++D G + RL
Sbjct: 103 AVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR-LRIADFGAAARLAAKG--- 158
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAI 724
TG FQ G L T+ + APE +L+G Q R+
Sbjct: 159 ----TGAGE------------------FQ-GQLLGTIAF-----MAPE-VLRGEQYGRSC 189
Query: 725 DLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV----------EHIPEAV-DL 773
D++S+GC++ T K P+ +F + EH+ + D+
Sbjct: 190 DVWSVGCVIIEMAT-AKPPWNAE-----KHSNHLALIFKIASATTAPSIPEHLSPGLRDV 243
Query: 774 FTRLLDPNPDLRPKAQNVLNHPFF 797
R L+ P+ RP ++ +L HP F
Sbjct: 244 TLRCLELQPEDRPPSRELLKHPVF 267
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 6e-11
Identities = 60/221 (27%), Positives = 88/221 (39%), Gaps = 74/221 (33%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QLLK G++ HE ++HRDLKPQN+LI+K KL+D G+++
Sbjct: 108 QLLK-------GIAFCHENRVLHRDLKPQNLLINKRGEL--KLADFGLAR---------- 148
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAID 725
A G+ V F T+ Y +AP+ LL R + +ID
Sbjct: 149 --AFGIP------------------VNTFSNEVVTLWY-----RAPDVLLGSRTYSTSID 183
Query: 726 LFSLGCILFFCITGGKHPYGES----------------------------FERDANIVKD 757
++S+GCI+ ITG G + ++
Sbjct: 184 IWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPP 243
Query: 758 RKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ L H P +DL RLL NP+LR A + L HP+F
Sbjct: 244 QDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 1e-10
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 116/349 (33%)
Query: 477 FNKEIAKGSNGTVVL---EGNYEGRSVAVKRLVKTHHDVALKEIQNLIA------SDQHP 527
F K + GS G V+L +G+ G+ A+K L K V LK++++++ S +HP
Sbjct: 5 FIKTLGTGSFGRVMLVRHKGS--GKYYALKILSK-AKIVKLKQVEHVLNEKRILQSIRHP 61
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+V YG D +YL +E YV G L + P
Sbjct: 62 FLVNLYGSFQDDSNLYLVME----------YVPGGELFSHLR------------KSGRFP 99
Query: 588 VMENTKDIELWKANGHPSAQLLKVTR----DIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
V R +V L +LH + +++RDLKP+N+L+ D
Sbjct: 100 ---------------------EPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG 138
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
K++D G +KR++G L C
Sbjct: 139 YI--KITDFGFAKRVKGRTYTL-----------------------C-------------- 159
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGES----FERDANIVKD 757
G+ + APE +L +A+D ++LG +++ + G +P + ++ +E+ I++
Sbjct: 160 -GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG--YPPFFDDNPIQIYEK---ILEG 213
Query: 758 RKDLFLVEHIPEAVDLFTRLLDPNPD-----LRPKAQNVLNHPFFWTAD 801
+ F P+A DL LL + L+ ++ NHP+F D
Sbjct: 214 KVR-FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 1e-10
Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 29/134 (21%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
++ L+ H G++HRDLKPQN+++S AK+ D GI L G T
Sbjct: 88 VLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLT--- 144
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
L G+ + APEQL T DL++ G I
Sbjct: 145 RTTEVL-------------------------GTPTYCAPEQLRGEPVTPNSDLYAWGLIF 179
Query: 734 FFCITGGKHPYGES 747
C+TG + G S
Sbjct: 180 LECLTGQRVVQGAS 193
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 79/331 (23%), Positives = 128/331 (38%), Gaps = 96/331 (29%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRL------VKTHHDVALKEIQNLIASDQHPNIVR 531
K++ KGS G+V + + + A+K + K D A+ EI+ ++AS HPNI+
Sbjct: 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKERED-AVNEIR-ILASVNHPNIIS 63
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ D + + + +E DL +S ++ L+ E I
Sbjct: 64 YKEAFLDGNKLCIVME--YAPFGDLSKAISKR--------KKKRKLIPEQEI-------- 105
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
W+ QLL+ GL LHE ++HRDLK N+L+ + K+ D
Sbjct: 106 ------WRI----FIQLLR-------GLQALHEQKILHRDLKSANILLVANDLV--KIGD 146
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
+GISK L+ +M+ TQ T + A
Sbjct: 147 LGISKVLKKNMA-KTQIGTPH------------------------------------YMA 169
Query: 712 PEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP- 768
PE + +GR + D++SLGC+L+ T P+ S + V+ K IP
Sbjct: 170 PE-VWKGRPYSYKSDIWSLGCLLYEMAT-FAPPFEARSMQDLRYKVQRGK----YPPIPP 223
Query: 769 ----EAVDLFTRLLDPNPDLRPKAQNVLNHP 795
+ + +L P LRP +L P
Sbjct: 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 48/192 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I L HLH+ G+I+RDLKP+N+L+ D KL+D G+ K
Sbjct: 108 EISLALEHLHQQGIIYRDLKPENILL--DAQGHVKLTDFGLCK----------------- 148
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
E + + G + T G+ + APE L++ +A+D +SLG ++
Sbjct: 149 ----------------ESIHE-GTVTHTF-CGTIEYMAPEILMRSGHGKAVDWWSLGALM 190
Query: 734 FFCITGGKHPYGESFERDAN-IVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLR----- 785
+ +TG E+ ++ + I+K + +L +L PEA DL +LL NP R
Sbjct: 191 YDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLT---PEARDLLKKLLKRNPSSRLGAGP 247
Query: 786 PKAQNVLNHPFF 797
A V +HPFF
Sbjct: 248 GDAAEVQSHPFF 259
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 75/329 (22%), Positives = 125/329 (37%), Gaps = 94/329 (28%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAV------KRLVKTHHDVALKEIQNLIASDQHPNIVRWYG 534
+ KG+ G L E S+ V RL + AL EI +++ QHPNI+ +Y
Sbjct: 8 LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEI-VILSLLQHPNIIAYYN 66
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
D + + + +E G+ +++ Q L E
Sbjct: 67 HFMDDNTLLIEMEYAN----------GGTLYDKIV--RQKGQLFEE-------------- 100
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+L IVS +S++H+ G++HRD+K N+ ++K KL D GI
Sbjct: 101 -----------EMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGDFGI 147
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
SK L + S M +V G+ + +PE
Sbjct: 148 SKILGSEYS--------MAETVV---------------------------GTPYYMSPE- 171
Query: 715 LLQGRQTRA-IDLFSLGCILFFCITGGKHPYGESFERD------ANIVKDRKDLFLVEHI 767
L QG + D+++LGC+L+ +T + +F+ IV+ + +
Sbjct: 172 LCQGVKYNFKSDIWALGCVLYELLTLKR-----TFDATNPLNLVVKIVQGNYTPVVSVYS 226
Query: 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E + L LL +P+ RP A VL+ P
Sbjct: 227 SELISLVHSLLQQDPEKRPTADEVLDQPL 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 2e-10
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 49/198 (24%)
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
+ I G+ HLH + +++RD+KP+NVL+ D+ C +LSD+G++ L+ + +TQ A
Sbjct: 101 SAQITCGILHLHSMDIVYRDMKPENVLLD-DQGNC-RLSDLGLAVELKDGKT-ITQRA-- 155
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 731
G++G+ APE L + + +D F++GC
Sbjct: 156 ---------------------------------GTNGYMAPEILKEEPYSYPVDWFAMGC 182
Query: 732 ILFFCITGGKHPYGESFER-DANIVKDR--KDLFLVEH---IPEAVDLFTRLLDPNPDLR 785
++ + G+ P+ + E+ +K R +D EH E+ D+ L P+ R
Sbjct: 183 SIYEMV-AGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDR 241
Query: 786 ----PKAQNVLNHPFFWT 799
K + H FF T
Sbjct: 242 LGSREKNDDPRKHEFFKT 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 79/264 (29%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540
I +G G V L+G Y G+ VAVK + A E ++ H N+VR GV
Sbjct: 14 IGEGEFGAV-LQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNG 72
Query: 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600
+Y+ +E + NL+N +R R ++
Sbjct: 73 -LYIVMELMS-----------------------KGNLVNFLRTRGRALV----------- 97
Query: 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660
QLL+ + D+ G+ +L L+HRDL +N+L+S+D AK+SD G+++
Sbjct: 98 ---SVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKVSDFGLAR---- 148
Query: 661 DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ 720
+ G+D + + W APE L +
Sbjct: 149 ------VGSMGVDNSKLPV----------------------------KWTAPEALKHKKF 174
Query: 721 TRAIDLFSLGCILFFCITGGKHPY 744
+ D++S G +L+ + G+ PY
Sbjct: 175 SSKSDVWSYGVLLWEVFSYGRAPY 198
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 48/209 (22%)
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
+ R+++ GL +LHE G IHRD+K N+L+S++ KL+D G+S + LT +
Sbjct: 103 ILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD--VKLADFGVSGQ-------LTSTMS 153
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLG 730
+ F G+ W APE + Q D++SLG
Sbjct: 154 KRNT-------------------------FV---GTPFWMAPEVIKQSGYDEKADIWSLG 185
Query: 731 CILFFCITG-----GKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRL-LDPNPDL 784
G HP F I K+ + F L L+ +P
Sbjct: 186 ITAIELAKGEPPLSDLHPMRVLFL----IPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKE 241
Query: 785 RPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
RP A+ +L H F A + S+L + +R
Sbjct: 242 RPSAKELLKHKFIKKA-KKTSYLTLLIER 269
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 117/349 (33%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVK--RLVKTHHDVALKEIQNLIASDQHPNIVRWYGV 535
+ I +G+ G V + + G+ VA+K +++ + +E L HPNI +YG
Sbjct: 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGA 71
Query: 536 ------ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ D ++L +E C GS ++L+ +R + +
Sbjct: 72 FIKKNPPGNDDQLWLVMELCG----------GGSV----------TDLVKGLRKKGKRLK 111
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
E + + R+ + GL++LHE +IHRD+K QN+L++K+ KL
Sbjct: 112 EE---------------WIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKL 154
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
D G+S +L T + G+ W
Sbjct: 155 VDFGVSAQLDS-----TLGRRN------------------TFI------------GTPYW 179
Query: 710 QAPEQLLQGRQTRA-----IDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRK 759
APE + Q A D++SLG IT GK P + + +
Sbjct: 180 MAPEVIACDEQPDASYDARSDVWSLG------ITAIELADGKPPLCD--------MHPMR 225
Query: 760 DLFLVEHIP------------EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
LF + P + D + L N + RP + +L HPF
Sbjct: 226 ALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 3e-10
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 78/218 (35%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-KLSDMGISKRLQGDMSCLTQNATGMD 673
I+ GL ++H G+IHRDLKP N+ +++D C K+ D G+++ +M+
Sbjct: 127 ILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARHTDDEMT---------- 173
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGC 731
GY ++ W +APE +L + +D++S+GC
Sbjct: 174 -----------------------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204
Query: 732 ILFFCITG-----GKHPY-------------GESF------ERDANIV--------KDRK 759
I+ +TG G E E N + KD K
Sbjct: 205 IMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFK 264
Query: 760 DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
++F P A+DL ++L +PD R A L HP+
Sbjct: 265 EVF-SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 4e-10
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 611 VTR----DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS----------- 655
VTR + V + +H++G IHRD+KP N+LI + KLSD G+S
Sbjct: 102 VTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHI--KLSDFGLSTGFHKQHDSAY 159
Query: 656 --KRLQGDMSCLTQNATGMDLQLVYLVSILL--KLVICECVFQFGVLFF-TVGYGSSGWQ 710
K LQG + + V +++ + K I ++ + TV G+ +
Sbjct: 160 YQKLLQGKSN--KNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTV--GTPDYI 215
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHI-- 767
APE LQ + D +SLG I+F C+ G E S E I+ R+ L+ + I
Sbjct: 216 APEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHL 275
Query: 768 -PEAVDLFTRLL-DPNPDL-RPKAQNVLNHPFF 797
EA DL RL+ + L R A + +HPFF
Sbjct: 276 SVEAEDLIRRLITNAENRLGRGGAHEIKSHPFF 308
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 4e-10
Identities = 52/235 (22%), Positives = 89/235 (37%), Gaps = 87/235 (37%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA--KLSDMGISKRLQGDMSCLTQNATGM 672
I++G+ +LH ++HRDLKP N+L+ + K+ D+G+++ L
Sbjct: 117 ILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR--------LFNAP--- 165
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGC 731
L+ + + +V+ T+ Y +APE LL R T+AID++++GC
Sbjct: 166 -LKPLADLD---PVVV------------TIWY-----RAPELLLGARHYTKAIDIWAIGC 204
Query: 732 I---------LFFCITGGKHP----YGESFERDANIVK-----DRKDLFLVEHIPE---- 769
I +F + ER I + KD ++ +PE
Sbjct: 205 IFAELLTLEPIFKGREAKIKKSNPFQRDQLER---IFEVLGTPTEKDWPDIKKMPEYDTL 261
Query: 770 ---------------------------AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
DL +LL+ +P R A+ L HP+F
Sbjct: 262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 5e-10
Identities = 95/339 (28%), Positives = 142/339 (41%), Gaps = 92/339 (27%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLV------KTHHDV-ALK-EIQNL 520
R+GKL + +G+ G V L + + GR +AVK++ +T +V AL+ EIQ L
Sbjct: 5 RLGKL------LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQ-L 57
Query: 521 IASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
+ + H IV++YG D LS+ + ++ GS ++QL + L E
Sbjct: 58 LKNLLHERIVQYYGCLRDPMERTLSIF--------MEHMPGGSIKDQLKS----YGALTE 105
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS 640
R K TR I+ G+S+LH ++HRD+K N+L
Sbjct: 106 NVTR-------------------------KYTRQILEGVSYLHSNMIVHRDIKGANIL-- 138
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
+D KL D G SKRLQ CL+ TGM K V
Sbjct: 139 RDSVGNVKLGDFGASKRLQ--TICLS--GTGM------------KSVT------------ 170
Query: 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK---D 757
G+ W +PE + R D++S+GC + +T K P+ E FE A I K
Sbjct: 171 ----GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT-EKPPWAE-FEAMAAIFKIATQ 224
Query: 758 RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ L H+ + F + + LRP A +L H F
Sbjct: 225 PTNPVLPPHVSDHCRDFLKRIFVEAKLRPSADELLRHTF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 5e-10
Identities = 70/358 (19%), Positives = 123/358 (34%), Gaps = 117/358 (32%)
Query: 480 EIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWY 533
+ +G+ G V+ N G VA+K+ ++ D AL+E++ L +H NIV
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLK 66
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+ +YL E +L +L+ E L +R
Sbjct: 67 EAFRRKGRLYLVFEYVERTLLELL--------------EASPGGLPPDAVRSY------- 105
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+W QLL+ +++ H +IHRD+KP+N+L+S+ KL D G
Sbjct: 106 ---IW--------QLLQ-------AIAYCHSHNIIHRDIKPENILVSESGV--LKLCDFG 145
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAP 712
++ L+ + L Y ++ W +AP
Sbjct: 146 FARALRARPA-------------SPLTD----------------------YVATRWYRAP 170
Query: 713 EQLLQGRQ-TRAIDLFSLGCILFFCITG--------------------GKHP--YGESFE 749
E L+ + +D++++GCI+ + G G P + E F
Sbjct: 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230
Query: 750 RDAN----IVKDRKDLFLVEHIPE------AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + +E A+D L +P R +L HP+F
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 59/229 (25%)
Query: 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG---- 671
V L +LH G++HRDLKP N+LI+ KL+D G+SK G MS T G
Sbjct: 111 VLALEYLHNYGIVHRDLKPDNLLITSMGHI--KLTDFGLSK--IGLMSLTTNLYEGHIEK 166
Query: 672 -----MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
+D Q+ G+ + APE +L+ + +D
Sbjct: 167 DTREFLDKQV---------------------------CGTPEYIAPEVILRQGYGKPVDW 199
Query: 727 FSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEH----IPEAVDLFTRLLDPN 781
+++G IL+ + G +G++ E ++ D D+ E +A DL +RLL N
Sbjct: 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISD--DIEWPEGDEALPADAQDLISRLLRQN 257
Query: 782 PDLR---PKAQNVLNHPFF----WTADTRLSFLRDVSDRVELEDRESDS 823
P R A V H FF W LR ++ + + E D+
Sbjct: 258 PLERLGTGGAFEVKQHRFFLGLDWN-----GLLRQKAEFIPQLESEDDT 301
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 6e-10
Identities = 88/339 (25%), Positives = 142/339 (41%), Gaps = 92/339 (27%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRL------VKTHHDV-ALK-EIQNL 520
R+GKL + +G+ G V L + + GR +AVK++ +T +V AL+ EIQ L
Sbjct: 5 RLGKL------LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQ-L 57
Query: 521 IASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
+ + +H IV++YG D + LS+ + Y+ GS ++QL A L E
Sbjct: 58 LKNLRHDRIVQYYGCLRDPEEKKLSIF--------VEYMPGGSIKDQLKA----YGALTE 105
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS 640
R + TR I+ G+S+LH ++HRD+K N+L
Sbjct: 106 NVTR-------------------------RYTRQILQGVSYLHSNMIVHRDIKGANIL-- 138
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
+D + KL D G SKR +Q + + +K V
Sbjct: 139 RDSAGNVKLGDFGASKR----------------IQTICMSGTGIKSVT------------ 170
Query: 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK---D 757
G+ W +PE + R D++S+ C + +T K P+ E +E A I K
Sbjct: 171 ----GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT-EKPPWAE-YEAMAAIFKIATQ 224
Query: 758 RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
L + + +A F + + RP A+ +L HPF
Sbjct: 225 PTKPMLPDGVSDACRDFLKQIFVEEKRRPTAEFLLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 6e-10
Identities = 74/322 (22%), Positives = 119/322 (36%), Gaps = 101/322 (31%)
Query: 497 GRSVAVKRL----VKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552
VA+KR+ +T D KE+Q ++ HPN+V++Y D ++L + +
Sbjct: 26 NEKVAIKRIDLEKCQTSVDELRKEVQ-AMSQCNHPNVVKYYTSFVVGDELWLVMPYLSG- 83
Query: 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612
GS LL +M+++ + G A + V
Sbjct: 84 ---------GS---------------------LLDIMKSS-----YPRGGLDEAIIATVL 108
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGM 672
++++ GL +LH G IHRD+K N+L+ +D S K++D G+S L A G
Sbjct: 109 KEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS--VKIADFGVSASL----------ADGG 156
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGC 731
D + K + G+ W APE + Q D++S G
Sbjct: 157 DRT-----RKVRKTFV----------------GTPCWMAPEVMEQVHGYDFKADIWSFG- 194
Query: 732 ILFFCITGGKHPYGE----------------SFERDANIVKDRKDLFLVEHIPEAVDLFT 775
I + G PY + S E A+ K K + +
Sbjct: 195 ITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF---------RKMIS 245
Query: 776 RLLDPNPDLRPKAQNVLNHPFF 797
L +P RP A+ +L H FF
Sbjct: 246 LCLQKDPSKRPTAEELLKHKFF 267
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 7e-10
Identities = 50/223 (22%), Positives = 82/223 (36%), Gaps = 81/223 (36%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ GL ++H +IHRDLKP N+L+++D ++ D G+++
Sbjct: 116 LLRGLKYIHSANVIHRDLKPSNLLVNEDCEL--RIGDFGMAR------------------ 155
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQ-GRQTRAIDLFSLGCI 732
+F Y ++ W +APE LL T AID++S+GCI
Sbjct: 156 --------------GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI 201
Query: 733 ---------LFFCITGGKHP-----------------------------YGESFERDANI 754
LF GK+ Y ++ R
Sbjct: 202 FAEMLGRRQLF----PGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ-- 255
Query: 755 VKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+F PEA+DL +++L +P+ R + L HPF
Sbjct: 256 PVPWSKIFPKAS-PEALDLLSQMLQFDPEERITVEQALQHPFL 297
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 8e-10
Identities = 75/328 (22%), Positives = 125/328 (38%), Gaps = 89/328 (27%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKR--LVKTHH-DVALKEIQNLIASD-QHPNIVRWY 533
+I +GS G V + + GR VAVK+ L K ++ E+ +I D QHPNIV Y
Sbjct: 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEV--VIMRDYQHPNIVEMY 82
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
D +++ +E ++ G+ ++++ R+
Sbjct: 83 SSYLVGDELWVVME----------FLEGGAL----------TDIVTHTRMN--------- 113
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+ V ++ LS LH G+IHRD+K ++L++ D KLSD G
Sbjct: 114 -----------EEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR--VKLSDFG 160
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ ++ + LV G+ W APE
Sbjct: 161 FCAQVSKEVP-----------RRKSLV------------------------GTPYWMAPE 185
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHI---PE 769
+ + +D++SLG I+ + G+ PY E + ++D L P
Sbjct: 186 VISRLPYGTEVDIWSLG-IMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPR 244
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
R+L +P R A +LNHPF
Sbjct: 245 LRSFLDRMLVRDPAQRATAAELLNHPFL 272
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 77/344 (22%), Positives = 130/344 (37%), Gaps = 121/344 (35%)
Query: 494 NYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548
G VA+K++ D A++EI +L+ HPNIVR V ++ +YL E
Sbjct: 21 KLTGEIVALKKIRLETEDEGVPSTAIREI-SLLKELNHPNIVRLLDVVHSENKLYLVFE- 78
Query: 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608
F + K DS P+ + +
Sbjct: 79 ---------------FLDLDLKKYMDS----------SPLTGLDPPL------------I 101
Query: 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQN 668
++ G+++ H ++HRDLKPQN+LI ++ + KL+D G+++
Sbjct: 102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGAL--KLADFGLAR------------ 147
Query: 669 ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLF 727
A G + ++ E V T+ Y +APE LL RQ + +D++
Sbjct: 148 AFG----------VPVRTYTHEVV--------TLWY-----RAPEILLGSRQYSTPVDIW 184
Query: 728 SLGCILFFCITGGKHPYGESFERDANI-----------------------VKDRKDLF-- 762
S+GCI + + P F D+ I + D K F
Sbjct: 185 SIGCIFAEMVN--RRPL---FPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239
Query: 763 -----LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L + +P + +DL +++L +P R A+ L HP+F
Sbjct: 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 8e-10
Identities = 69/349 (19%), Positives = 119/349 (34%), Gaps = 121/349 (34%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ----------------NLIA 522
+ I KGS GTV V+R + KEI N++
Sbjct: 6 ETIGKGSFGTVRK----------VRR-KSDGKILVWKEIDYGNMTEKEKQQLVSEVNILR 54
Query: 523 SDQHPNIVRWYG--VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
+HPNIVR+Y ++ +Y+ +E C DL ++ K++ +
Sbjct: 55 ELKHPNIVRYYDRIIDRSNQTLYIVME--YCEGGDLAQLIQ-------KCKKERKYI--- 102
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG-----LIHRDLKPQ 635
+ ++ ++ L H ++HRDLKP
Sbjct: 103 -----------------------EEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPA 139
Query: 636 NVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695
N+ + + KL D G++K L D
Sbjct: 140 NIFLDANN--NVKLGDFGLAKILGHD---------------------------------- 163
Query: 696 GVLFFTVGY-GSSGWQAPEQLLQGRQTRAIDLFSLGCILF-FCITGGKHPY-GESFERDA 752
F Y G+ + +PEQL D++SLGC+++ C P+ + + A
Sbjct: 164 --SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC--ALSPPFTARNQLQLA 219
Query: 753 NIVKDRKDLFLVEHIPE--AVDLF---TRLLDPNPDLRPKAQNVLNHPF 796
+ +K+ K IP + +L +L+ +PD RP + +L P
Sbjct: 220 SKIKEGK----FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 60/258 (23%), Positives = 99/258 (38%), Gaps = 77/258 (29%)
Query: 490 VLEGNYEGRS-VAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546
V G + G + VAVK L L+E Q ++ +H +V+ Y V S+++ +Y+
Sbjct: 22 VWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQ-IMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606
E Y+ GS + L K + L LP
Sbjct: 81 E----------YMSKGSLLDFL--KSGEGKKLR------LP------------------- 103
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QL+ + I G+++L IHRDL +N+L+ ++ K++D G+++ ++ D
Sbjct: 104 QLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG--ENLVCKIADFGLARLIEDDEYTAR 161
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
+ A K I W APE GR T D+
Sbjct: 162 EGA---------------KFPI-------------------KWTAPEAANYGRFTIKSDV 187
Query: 727 FSLGCILFFCITGGKHPY 744
+S G +L +T G+ PY
Sbjct: 188 WSFGILLTEIVTYGRVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 56/210 (26%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
G P + T I+SGL HLH+ +I+RDLKP+NVL+ D + ++SD+G++ L+
Sbjct: 93 GFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGN--VRISDLGLAVELKDG 150
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY-GSSGWQAPEQLLQGRQ 720
S T GY G+ G+ APE LLQG +
Sbjct: 151 QSK------------------------------------TKGYAGTPGFMAPE-LLQGEE 173
Query: 721 -TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI-------PEAVD 772
++D F+LG L+ I + P+ E+ N K+ K L + + P +
Sbjct: 174 YDFSVDYFALGVTLYEMI-AARGPFRARGEKVEN--KELKQRILNDSVTYPDKFSPASKS 230
Query: 773 LFTRLLDPNPDLRPKAQN-----VLNHPFF 797
LL +P+ R ++ + HP F
Sbjct: 231 FCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 52/202 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I+ L HLH++G+++RD+K +N+L+ + L+D G+SK L++
Sbjct: 113 EIILALEHLHKLGIVYRDIKLENILLDSEGHVV--LTDFGLSKEF------LSEEK---- 160
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-QGRQTRAIDLFSLGCI 732
E + F G+ + APE + +G +A+D +SLG +
Sbjct: 161 ----------------ERTYSF--------CGTIEYMAPEIIRGKGGHGKAVDWWSLGIL 196
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP-----EAVDLFTRLLDPNPDLR-- 785
+F +TG P+ ER+ R+ L P EA DL +LL +P R
Sbjct: 197 IFELLTGAS-PFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLG 255
Query: 786 ---PKAQNVLNHPFF----WTA 800
A + HPFF W A
Sbjct: 256 AGPQGASEIKEHPFFKGLDWEA 277
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 80/263 (30%)
Query: 480 EIAKGSNGTVVLEGNYE--GRSVAVKRL-VKTHHD----VALKEIQNL--IASDQHPNIV 530
EI +G+ G V + + GR VA+KR+ V+T + ++E+ L + + +HPN+V
Sbjct: 8 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R + V CT S D L+ FE +QD L ++
Sbjct: 68 RLFDV-------------CTVSRTDRETKLTLVFEHV----DQD----------LTTYLD 100
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ G P+ + + ++ GL LH ++HRDLKPQN+L++ KL+
Sbjct: 101 KVPE------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI--KLA 152
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+++ +Y + L V+ T+ Y +
Sbjct: 153 DFGLAR--------------------IYSFQMALTSVVV-----------TLWY-----R 176
Query: 711 APEQLLQGRQTRAIDLFSLGCIL 733
APE LLQ +DL+S+GCI
Sbjct: 177 APEVLLQSSYATPVDLWSVGCIF 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 50/205 (24%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I+ GL H+H +++RDLKP N+L+ D+ ++SD+G L D S +A+
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLG----LACDFSKKKPHAS--- 155
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCI 732
G+ G+ APE L +G + D FSLGC+
Sbjct: 156 ------------------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCM 185
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFLVE----HIPEAVDLFTRLLDPNPDLR--- 785
LF + G P+ + +D + + VE PE L LL + + R
Sbjct: 186 LFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 244
Query: 786 --PKAQNVLNHPFFWTADTRLSFLR 808
AQ V HPFF + D ++ FL+
Sbjct: 245 LGRGAQEVKEHPFFRSLDWQMVFLQ 269
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 3e-09
Identities = 90/380 (23%), Positives = 137/380 (36%), Gaps = 111/380 (29%)
Query: 432 IPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTV-V 490
+P S + S +G+ + ++L +RV RIG G+ GTV
Sbjct: 47 LPPPSSSSSSSSSSSASGSAPSAAKSLSEL--ERV--NRIGS----------GAGGTVYK 92
Query: 491 LEGNYEGRSVAVKRLVKTHHDVALKEIQNLIA---SDQHPNIVRWYGVESDQDFVYLSLE 547
+ GR A+K + H D ++I I HPN+V+ + + + + LE
Sbjct: 93 VIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152
Query: 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607
++ GS E A EQ
Sbjct: 153 ----------FMDGGSLEGTHIADEQ---------------------------------F 169
Query: 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ 667
L V R I+SG+++LH ++HRD+KP N+LI+ K+ K++D G+S+ L
Sbjct: 170 LADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN--VKIADFGVSRIL--------- 218
Query: 668 NATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ----LLQGR-QTR 722
A MD C G T+ Y S PE+ L G
Sbjct: 219 -AQTMD----------------PCNSSVG----TIAYMS-----PERINTDLNHGAYDGY 252
Query: 723 AIDLFSLG-CILFFCITGGKHPYGESFERD-----ANIVKDRKDLFLVEHIPEAVDLFTR 776
A D++SLG IL F + G+ P+G + D I + E +
Sbjct: 253 AGDIWSLGVSILEFYL--GRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISC 310
Query: 777 LLDPNPDLRPKAQNVLNHPF 796
L P R A +L HPF
Sbjct: 311 CLQREPAKRWSAMQLLQHPF 330
|
Length = 353 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 4e-09
Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 77/283 (27%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+V +E+ +G+ G V L Y VAVK L +T + A K+ + L+ + Q
Sbjct: 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ 66
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H NIV++YGV ++ D + E Y+ G + L + D+ L
Sbjct: 67 HENIVKFYGVCTEGDPPIMVFE----------YMEHGDLNKFLRSHGPDAAFL------- 109
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
++ EL + QLL++ I SG+ +L +HRDL +N L+ D
Sbjct: 110 --KSPDSPMGELTLS------QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--L 159
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+S+ VY ++ VG G
Sbjct: 160 VVKIGDFGMSRD-------------------VYTTD-----------------YYRVG-G 182
Query: 706 SS----GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
+ W PE ++ + T D++S G +L+ T GK P+
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 91/362 (25%), Positives = 141/362 (38%), Gaps = 125/362 (34%)
Query: 479 KEIAKGSNGTVVLEGNYE--GRSVAVK--RLVKTHHDV---ALKEIQNLIASDQHPNIVR 531
++I +G+ G VV +G + G+ VA+K RL V A++EI +L+ QHPNIV
Sbjct: 6 EKIGEGTYG-VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREI-SLLKELQHPNIVC 63
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
V + +YL E + L K DS LP
Sbjct: 64 LQDVLMQESRLYLIFEFLSMDLK----------------KYLDS----------LP---- 93
Query: 592 TKDIELWKANGHPSAQLLK-VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ A+L+K I+ G+ H ++HRDLKPQN+LI D KL+
Sbjct: 94 --------KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI--DNKGVIKLA 143
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+++ A G+ ++ VY ++ T+ Y +
Sbjct: 144 DFGLAR------------AFGIPVR-VYTHEVV-----------------TLWY-----R 168
Query: 711 APEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI--------------- 754
APE LL R + +D++S+G I F K P F D+ I
Sbjct: 169 APEVLLGSPRYSTPVDIWSIGTI--FAEMATKKPL---FHGDSEIDQLFRIFRILGTPTE 223
Query: 755 --------VKDRKDLF-------LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHP 795
+ D K+ F L + + +DL ++L +P R A+ LNHP
Sbjct: 224 DVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP 283
Query: 796 FF 797
+F
Sbjct: 284 YF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 5e-09
Identities = 85/356 (23%), Positives = 136/356 (38%), Gaps = 114/356 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVK--RLVKTHHDV---ALKEIQNLIASDQHPNIVRW 532
++I +G+ G V N G VA+K RL V A++EI +L+ HPNIV+
Sbjct: 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHPNIVKL 64
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V ++ +YL E F Q K D++ L+ +
Sbjct: 65 LDVIHTENKLYLVFE----------------FLHQDLKKFMDASPLSGI----------- 97
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
P + ++ GL+ H ++HRDLKPQN+LI+ + + KL+D
Sbjct: 98 -----------PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI--KLADF 144
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+++ + T E V T+ Y +AP
Sbjct: 145 GLARAFGVPVRTYTH----------------------EVV--------TLWY-----RAP 169
Query: 713 EQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERD-------------------A 752
E LL + + A+D++SLGCI +T G+S E D
Sbjct: 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGV 228
Query: 753 NIVKDRKDLF-------LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ D K F + +P + DL +++L +P+ R A+ L HPFF
Sbjct: 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 7e-09
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 83/327 (25%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQN----LIASDQHPNIVRWY 533
K+I +GS G + L + + +K + T V KE L+A +HPNIV ++
Sbjct: 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+ +++ +E C G +++N Q L +E
Sbjct: 66 ASFQENGRLFIVMEYCD----------GGDLMKRIN--RQRGVLFSE------------- 100
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+L I GL H+H+ ++HRD+K QN+ +SK+ AKL D G
Sbjct: 101 ------------DQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFG 147
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
I+++L M +L Y CV G+ + +PE
Sbjct: 148 IARQLNDSM------------ELAY-----------TCV------------GTPYYLSPE 172
Query: 714 QLLQGRQTRAIDLFSLGCILF-FCITGGKHPY-GESFERDA-NIVKDRKDLFLVEHIPEA 770
D++SLGC+L+ C KHP+ G + + I + +
Sbjct: 173 ICQNRPYNNKTDIWSLGCVLYELCTL--KHPFEGNNLHQLVLKICQGYFAPISPNFSRDL 230
Query: 771 VDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L ++L +P RP ++L PF
Sbjct: 231 RSLISQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 7e-09
Identities = 83/359 (23%), Positives = 139/359 (38%), Gaps = 123/359 (34%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYG 534
+ +GS G V+ + E G+ VA+K+ +++ D +A++EI+ ++ +H N+V
Sbjct: 9 VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIR-MLKQLRHENLVNLIE 67
Query: 535 VESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
V + +YL E + L+DL E+ N L+E R+R
Sbjct: 68 VFRRKKRLYLVFEFVDHTVLDDL---------------EKYPNGLDESRVR--------- 103
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
K I+ G+ H +IHRD+KP+N+L+S +S KL D G
Sbjct: 104 ----------------KYLFQILRGIEFCHSHNIIHRDIKPENILVS--QSGVVKLCDFG 145
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAP 712
++ L T Y ++ W +AP
Sbjct: 146 FARTLAAPGEVYTD------------------------------------YVATRWYRAP 169
Query: 713 EQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGES---------------FERDANIV 755
E LL G + RA+D++++GC++ +TG G+S R I
Sbjct: 170 E-LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228
Query: 756 KDRKDLFLVEHIPEA-----------------VDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ LF +PE +DL + L +PD RP + +L+H FF
Sbjct: 229 -QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 8e-09
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 51/196 (26%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IV L HLH++G+I+RD+K +N+L+ + L+D G+SK L +
Sbjct: 113 EIVLALDHLHQLGIIYRDIKLENILLDSEGH--VVLTDFGLSKEF------LAEEE---- 160
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR--QTRAIDLFSLGC 731
E + F G+ + APE + G +A+D +SLG
Sbjct: 161 ----------------ERAYSF--------CGTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196
Query: 732 ILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP-------EAVDLFTRLLDPNPDL 784
+ F +TG P+ E+ N + L P EA D +LL+ +P
Sbjct: 197 LTFELLTGAS-PFTVDGEQ--NSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKK 253
Query: 785 R---PKAQNVLNHPFF 797
R A + NHPFF
Sbjct: 254 RLGANGADEIKNHPFF 269
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 64/275 (23%), Positives = 102/275 (37%), Gaps = 85/275 (30%)
Query: 477 FNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVKTHHDVALKE---IQ--NLIASDQHPNIV 530
F KE+ G G V L G + G VA+K + + A+ E I+ ++ HPN+V
Sbjct: 8 FLKELGSGQFGVVHL-GKWRGKIDVAIKMI----REGAMSEDDFIEEAKVMMKLSHPNLV 62
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ YGV + Q +++ E Y+ +G LLN +R R
Sbjct: 63 QLYGVCTKQRPIFIVTE----------YMANGC-------------LLNYLRER--KGKL 97
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
T LL + D+ + +L G IHRDL +N L+ +D K+S
Sbjct: 98 GT-------------EWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGED--NVVKVS 142
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+++ + D Y S K + W
Sbjct: 143 DFGLARYVLDDQ---------------YTSSQGTKFPV-------------------KWA 168
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG 745
PE R + D++S G +++ + GK PY
Sbjct: 169 PPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-08
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 78/220 (35%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC-AKLSDMGISKRLQGDMSCLTQNATGMD 673
I+ GL ++H ++HRDLKP N+L++ + C K+ D G+++ ++ + TG
Sbjct: 115 ILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLAR-----IADPEHDHTG-- 164
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGC 731
F Y ++ W +APE +L + T+AID++S+GC
Sbjct: 165 --------------------------FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGC 198
Query: 732 ILFFCITG-----GKH--------------PYGESFERDANIVKDR-------------- 758
IL ++ GK P E I+ R
Sbjct: 199 ILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN---CIISLRARNYIKSLPFKPKV 255
Query: 759 --KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
LF P+A+DL ++L NP R + L HP+
Sbjct: 256 PWNKLF-PNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 1e-08
Identities = 75/329 (22%), Positives = 131/329 (39%), Gaps = 73/329 (22%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+V K + +G G VV L+G +VAVK L + L+++ NL+
Sbjct: 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN 61
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HP++++ YG S + L +E Y GS + L E R ++
Sbjct: 62 HPHVIKLYGACSQDGPLLLIVE----------YAKYGSLR----------SFLRESR-KV 100
Query: 586 LPVMENTKDIELWKANGHPSAQ------LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
P + +P + L+ I G+ +L E+ L+HRDL +NVL+
Sbjct: 101 GPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160
Query: 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699
++ + K+SD G+S+ + + S + ++ + ++
Sbjct: 161 AEGRK--MKISDFGLSRDVYEEDSYVKRSKGRIPVK------------------------ 194
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDR 758
W A E L T D++S G +L+ +T G +PY G + ER N++K
Sbjct: 195 ---------WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG 245
Query: 759 KDLFLVEHIPEAV-DLFTRLLDPNPDLRP 786
+ E+ E + +L PD RP
Sbjct: 246 YRMERPENCSEEMYNLMLTCWKQEPDKRP 274
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 80/349 (22%), Positives = 127/349 (36%), Gaps = 118/349 (33%)
Query: 497 GRSVAVKR-LVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551
GR VA+K+ L+ D AL+EI+ ++ +HPN+V
Sbjct: 33 GRVVALKKILMHNEKDGFPITALREIK-ILKKLKHPNVVP-------------------- 71
Query: 552 SLNDLIYVLSGSFEEQLNA-------KEQD-SNLLNEVRIRLLPVMENTKDIELWKANGH 603
L D+ + + + + D S LL ++L K L
Sbjct: 72 -LIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKL--TESQIKCYML------ 122
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
QLL+ G+++LHE ++HRD+K N+LI D K++D G+++ G
Sbjct: 123 ---QLLE-------GINYLHENHILHRDIKAANILI--DNQGILKIADFGLARPYDGPPP 170
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TR 722
G + LV T Y + PE LL R+ T
Sbjct: 171 NPKGGGGGGTRKYTNLV-------------------VTRWY-----RPPELLLGERRYTT 206
Query: 723 AIDLFSLGCIL--FFC---ITGGKH--------------------------PYGE---SF 748
A+D++ +GC+ F I GK P E SF
Sbjct: 207 AVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSF 266
Query: 749 ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+++R + PE +DL ++LL +P R A + L HP+F
Sbjct: 267 TNYPRTLEER----FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 41/206 (19%)
Query: 500 VAVKRL----VKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLND 555
VAVK L KT + LKEI+ +++ ++PNI+R GV D + + E
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIK-IMSRLKNPNIIRLLGVCVSDDPLCMITE-------- 97
Query: 556 LIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPS---AQLLKVT 612
Y+ +G + L+ +E +S AN PS A LL +
Sbjct: 98 --YMENGDLNQFLSQREIESTFT--------------------HANNIPSVSIANLLYMA 135
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGM 672
I SG+ +L + +HRDL +N L+ + K++D G+S+ L Q +
Sbjct: 136 VQIASGMKYLASLNFVHRDLATRNCLV--GNHYTIKIADFGMSRNLYSGDYYRIQGRAVL 193
Query: 673 DLQLVYLVSILL-KLVICECVFQFGV 697
++ + SILL K V+ FGV
Sbjct: 194 PIRWMAWESILLGKFTTASDVWAFGV 219
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 77/282 (27%)
Query: 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+V +E+ +G+ G V L Y + VAVK L K D A K+ L+ + Q
Sbjct: 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL-KDASDNARKDFHREAELLTNLQ 65
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H +IV++YGV + D + + E Y+ G + L A D+ L+ E
Sbjct: 66 HEHIVKFYGVCVEGDPLIMVFE----------YMKHGDLNKFLRAHGPDAVLMAEGN--- 112
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
E T+ +Q+L + + I +G+ +L +HRDL +N L+ ++
Sbjct: 113 -RPAELTQ------------SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN--L 157
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+S+ + + ++ VG
Sbjct: 158 LVKIGDFGMSRDV------------------------------------YSTDYYRVGGH 181
Query: 706 SS---GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
+ W PE ++ + T D++SLG +L+ T GK P+
Sbjct: 182 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 223
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 36/165 (21%)
Query: 589 MEN-TKDIELWKANGHPSA-QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
MEN + D L K +G + QL+ + R I SG+ +L ++G +HRDL +N+L+ + +
Sbjct: 87 MENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV--NSNLV 144
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+SD G+S+ L+ D G K+ I
Sbjct: 145 CKVSDFGLSRVLEDDPEAAYTTRGG-------------KIPI------------------ 173
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
W APE + + T A D++S G +++ ++ G+ PY E +D
Sbjct: 174 -RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD 217
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 83/335 (24%), Positives = 128/335 (38%), Gaps = 92/335 (27%)
Query: 480 EIAKGSNGTV-VLEGNYEGRSVAVKRL----VKTHHDVALKEIQNLIASDQHPNIVRWYG 534
EI +G+ GTV + G +AVKR+ + L ++ ++ S P IV++YG
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYG 70
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ ++ +E SL D Y V E K
Sbjct: 71 ALFREGDCWICMELMDISL-DKFYKY---------------------------VYEVLKS 102
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHL-HEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+ P L K+ V L++L E+ +IHRD+KP N+L+ D++ KL D G
Sbjct: 103 V-------IPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL--DRNGNIKLCDFG 153
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
IS +L D T++A G + APE
Sbjct: 154 ISGQLV-DSIAKTRDA-----------------------------------GCRPYMAPE 177
Query: 714 QLL----QGRQTRAIDLFSLGCILFFCITGGKHPY---GESFERDANIVK-DRKDL---F 762
++ G R+ D++SLG I + + GK PY F++ +VK D L
Sbjct: 178 RIDPSARDGYDVRS-DVWSLG-ITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSE 235
Query: 763 LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
E P V+ L + RPK + +L HPF
Sbjct: 236 EREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI 270
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|199218 cd10423, RNase_RNase-L, RNase domain (also known as the kinase extension nuclease domain) of RNase L | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-08
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 802 TRLSFLRDVSDRVELEDRESDSKLLRAL--EGIALVALNGKWDEKMETKFIENIGRY--- 856
R LR+V + +++ R+ S +LR L W K++ + ++ + ++
Sbjct: 2 NRYRTLRNVGNESDIKTRDDKSDILRLLQAGKSECSRSFPNWTSKIDKEVMDIMNKFYEK 61
Query: 857 RRYKY-DNVRDLLRVIRNKSNHFRELP-QDIQELLGSHPEGFYNYFSCRFPKLLIEVYN 913
+++ Y D V DLL+ IRN H E + ++E++G E YF FP L+I VY
Sbjct: 62 KKFFYQDTVGDLLKFIRNLGEHIDEEKNKRMKEIIGDPSE----YFQKTFPDLVIYVYK 116
|
Ribonuclease L (RNase L), sometimes referred to as the 2-5A-dependent RNase, is a highly regulated, latent endoribonuclease (thus the 'L' in RNase L) and is widely expressed in most mammalian tissues. It is involved in the mediation of the antiviral and pro-apoptotic activities of the interferon-inducible 2-5A system, which blocks infections by certain types of viruses through cleavage of viral and cellular single-stranded RNA. RNase L is unique in that it is composed of three major domains; N-terminus regulatory ankyrin repeat domain (ARD), followed by a linker, a protein kinase (PK)-like domain and a C-terminal ribonuclease (RNase) domain. The RNase domain has homology with IRE1, also containing both a kinase and an endoribonuclease, that functions in the unfolded protein response (UPR). RNase L has been shown to have an impact on the pathogenesis of prostate cancer; the RNase L gene, RNASEL, has been identified as a strong candidate for the hereditary prostate cancer 1 (HPC1) allele. The broad range of biological functions of RNase offers a possibility for RNase L as a therapeutic target. Length = 119 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 78/338 (23%), Positives = 131/338 (38%), Gaps = 101/338 (29%)
Query: 476 VFNKEIAKGSNGTVVL-EGNYEGRSVAVKRL-----VKTHHDVALKEIQNLIASDQHPNI 529
F + + KGS G V L +G+ +K+L + A +E Q L++ +HPNI
Sbjct: 3 CFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQ-LLSQLKHPNI 61
Query: 530 V----RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
V W G E ++ + C DL + L KEQ LL
Sbjct: 62 VAYRESWEG-EDGLLYIVMGF----CEGGDLYHKL----------KEQKGKLL------- 99
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
P Q+++ I L +LHE ++HRDLK QNV ++ ++
Sbjct: 100 ------------------PENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT--RTN 139
Query: 646 CAKLSDMGISKRL--QGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
K+ D+GI++ L Q DM+ S L+
Sbjct: 140 IIKVGDLGIARVLENQCDMA-----------------STLI------------------- 163
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN-----IVKDR 758
G+ + +PE D+++LGC ++ T KH + +D N I++ +
Sbjct: 164 -GTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT-LKHAFN---AKDMNSLVYRIIEGK 218
Query: 759 KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
++ PE +L +L P+ RP +++L P+
Sbjct: 219 LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 48/186 (25%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYG 534
I +GS G V N E G+ VA+K+ V++ D +AL+EI+ L +HPN+V
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRML-KQLKHPNLVNLIE 67
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V + ++L E C D +LNE+
Sbjct: 68 VFRRKRKLHLVFEYC------------------------DHTVLNELEKN---------- 93
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
G P + K+ + ++ H+ IHRD+KP+N+LI+K KL D G
Sbjct: 94 -----PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQI--KLCDFGF 146
Query: 655 SKRLQG 660
++ L G
Sbjct: 147 ARILTG 152
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 47/146 (32%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QL+ + R I SG+ +L E+ +HRDL +N+L++ + K+SD G+S+RL+
Sbjct: 107 QLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE------D 158
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG------WQAPEQLLQGRQ 720
AT Y + G W APE + +
Sbjct: 159 SEAT---------------------------------YTTKGGKIPIRWTAPEAIAYRKF 185
Query: 721 TRAIDLFSLGCILFFCITGGKHPYGE 746
T A D++S G +++ ++ G+ PY +
Sbjct: 186 TSASDVWSFGIVMWEVMSYGERPYWD 211
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 3e-08
Identities = 60/264 (22%), Positives = 99/264 (37%), Gaps = 76/264 (28%)
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HPNIV+ GV + + +Y+ +E V G F L K+ +
Sbjct: 51 HPNIVKLIGVCTQRQPIYIVME----------LVPGGDFLSFLRKKKDELKT-------- 92
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
QL+K D +G+++L IHRDL +N L+ ++
Sbjct: 93 --------------------KQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVL 132
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+SD G+S++ +Y S L ++ I
Sbjct: 133 --KISDFGMSRQEDDG---------------IYSSSGLKQIPI----------------- 158
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLV 764
W APE L GR + D++S G +L+ + G PY G + ++ V+ +
Sbjct: 159 --KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCP 216
Query: 765 EHIPEAV-DLFTRLLDPNPDLRPK 787
+ P+ V + R D P+ RPK
Sbjct: 217 QKCPDDVYKVMQRCWDYKPENRPK 240
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 55/209 (26%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
G + + +I GL LH+ +++RDLKP+N+L+ ++SD+G++ +
Sbjct: 98 GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHI--RISDLGLAVHVPEG 155
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT 721
Q G G+ G+ APE + R T
Sbjct: 156 -----QTIKGR-------------------------------VGTVGYMAPEVVKNERYT 179
Query: 722 RAIDLFSLGCILFFCITGGKHPYG--------ESFERDANIVKDRKDLFLVEHIPEAVDL 773
+ D ++LGC+L+ I G+ P+ E ER +VK+ ++ + + P+A L
Sbjct: 180 FSPDWWALGCLLYEMIA-GQSPFQQRKKKIKREEVER---LVKEVQEEYSEKFSPDARSL 235
Query: 774 FTRLLDPNPDLR-----PKAQNVLNHPFF 797
LL +P R A+ V HP F
Sbjct: 236 CKMLLCKDPKERLGCQGGGAREVKEHPLF 264
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 74/267 (27%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIVRWYGVES 537
K++ G G V + VAVK L V A E NL+ + QH +VR Y V +
Sbjct: 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 71
Query: 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597
++ +Y+ E Y+ GS + L + E LL
Sbjct: 72 KEEPIYIITE----------YMAKGSLLDFLKSDEGGKVLL------------------- 102
Query: 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
+L+ + I G++++ IHRDL+ NVL+S +S K++D G+++
Sbjct: 103 --------PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLARV 152
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ 717
++ + + A +F + W APE +
Sbjct: 153 IEDNEYTAREGA------------------------KFPI----------KWTAPEAINF 178
Query: 718 GRQTRAIDLFSLGCILFFCITGGKHPY 744
G T D++S G +L+ +T GK PY
Sbjct: 179 GSFTIKSDVWSFGILLYEIVTYGKIPY 205
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IV L HLH++G+I+RD+K +N+L+ + L+D G+SK D
Sbjct: 113 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVV--LTDFGLSKEFHEDEV---------- 160
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR--QTRAIDLFSLGC 731
E + F G+ + AP+ + G +A+D +S+G
Sbjct: 161 ----------------ERAYSF--------CGTIEYMAPDIVRGGDGGHDKAVDWWSMGV 196
Query: 732 ILFFCITGGKHPYGESFERDANIVKDRKDL-----FLVEHIPEAVDLFTRLLDPNPDLR- 785
+++ +TG P+ E+++ R+ L + E A D+ RLL +P R
Sbjct: 197 LMYELLTGAS-PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRL 255
Query: 786 ---PK-AQNVLNHPFF 797
P A + HPFF
Sbjct: 256 GCGPSDADEIKKHPFF 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 56/229 (24%)
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
++L +A Q+ + ++I+ GL +LH IHRD+K NVL+S+ KL+D G+
Sbjct: 90 LDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD--VKLADFGV 147
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
+ +L D Q+ + G+ W APE
Sbjct: 148 AGQL-------------TDTQIKRNTFV----------------------GTPFWMAPEV 172
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI--PEAVD 772
+ Q D++SLG IT + GE D + + + LFL+ P
Sbjct: 173 IQQSAYDSKADIWSLG------ITAIELAKGEPPNSDMHPM---RVLFLIPKNNPPTLTG 223
Query: 773 LFTR--------LLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
F++ L+ +P RP A+ +L H F + S+L ++ DR
Sbjct: 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSYLTELIDR 272
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 5e-08
Identities = 80/349 (22%), Positives = 130/349 (37%), Gaps = 93/349 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVK--------THHDVALKEIQNLIASDQHPNI 529
K + KG G V L G+ A+K L K L E + L D HP +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKR--VLTEQEILATLD-HPFL 63
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
Y + ++ L ++ C +L +L + Q L+E R
Sbjct: 64 PTLYASFQTETYLCLVMD--YCPGGELFRLL----------QRQPGKCLSEEVARF---- 107
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+ A +++ L +LH +G+++RDLKP+N+L+ + L
Sbjct: 108 --------YAA-------------EVLLALEYLHLLGIVYRDLKPENILLHESGHI--ML 144
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLV-------YLVSILLKLVICECVFQ---FGVLF 699
SD D+S + + + + SI + E F+ F
Sbjct: 145 SDF--------DLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSF---- 192
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDA---NIV 755
G+ + APE + A+D ++LG IL + + G P+ G + RD NI+
Sbjct: 193 ----VGTEEYIAPEVISGDGHGSAVDWWTLG-ILLYEMLYGTTPFKGSN--RDETFSNIL 245
Query: 756 KDRKDLFLVEHIP---EAVDLFTRLLDPNPDLR----PKAQNVLNHPFF 797
K K++ P A DL +LL +P R A + HPFF
Sbjct: 246 K--KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 5e-08
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 56/229 (24%)
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
++L K + + R+I+ GL +LH IHRD+K NVL+S+ KL+D G+
Sbjct: 90 LDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD--VKLADFGV 147
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
+ +L D Q+ + G+ W APE
Sbjct: 148 AGQL-------------TDTQIKRNTFV----------------------GTPFWMAPEV 172
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV---------- 764
+ Q D++SLG I + G+ P + + + LFL+
Sbjct: 173 IKQSAYDFKADIWSLG-ITAIELAKGEPPNSD--------LHPMRVLFLIPKNSPPTLEG 223
Query: 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
++ + L+ +P RP A+ +L H F + SFL ++ DR
Sbjct: 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDR 272
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 6e-08
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 43/262 (16%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLV--KTHHD---VALKEIQ---NLIASDQH 526
+V +E+ +G+ G V L Y K LV K D A K+ Q L+ + QH
Sbjct: 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 66
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
+IV++YGV D D + + E Y+ G + L A D+ +L + + R
Sbjct: 67 EHIVKFYGVCGDGDPLIMVFE----------YMKHGDLNKFLRAHGPDAMILVDGQPR-- 114
Query: 587 PVMENTKDIELWKANGHPS-AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+A G +Q+L + I SG+ +L +HRDL +N L+ +
Sbjct: 115 ------------QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN--L 160
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC-VFQFGVLFFTV-G 703
K+ D G+S+ + T + ++ + SI+ + E V+ FGV+ + +
Sbjct: 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 220
Query: 704 YGSSGW------QAPEQLLQGR 719
YG W + E + QGR
Sbjct: 221 YGKQPWFQLSNTEVIECITQGR 242
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 7e-08
Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 59/196 (30%)
Query: 480 EIAKGSNGTVV-LEGNYEGRSVAVKRLVKTHHDVALKEI----QNLIASDQHPNIVRWYG 534
EI G+ G V + G +AVK++ +T + K I ++ S P IV+ YG
Sbjct: 22 EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYG 81
Query: 535 V---ESDQDFVYLSLE---RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+SD V++ +E C L I
Sbjct: 82 YFITDSD---VFICMELMSTCLDKLLKRIQ------------------------------ 108
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISKDKSFCA 647
P L K+T IV L +L E G+IHRD+KP N+L+ D S
Sbjct: 109 ------------GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL--DASGNV 154
Query: 648 KLSDMGISKRLQGDMS 663
KL D GIS RL +
Sbjct: 155 KLCDFGISGRLVDSKA 170
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 7e-08
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 44/263 (16%)
Query: 475 VVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+V E+ +G+ G V L + VAVK L K + A ++ Q L+ Q
Sbjct: 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQ 65
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H +IVR+YGV ++ + + E Y+ G L + D+ +L
Sbjct: 66 HQHIVRFYGVCTEGRPLLMVFE----------YMRHGDLNRFLRSHGPDAKILAGGE--- 112
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ L Q+L + I SG+ +L + +HRDL +N L+ +
Sbjct: 113 ---DVAPGQLTL--------GQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG--L 159
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC-VFQFGVLFFTV-G 703
K+ D G+S+ + T + ++ + SIL + E ++ FGV+ + +
Sbjct: 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219
Query: 704 YGSSGW------QAPEQLLQGRQ 720
YG W +A E + QGR+
Sbjct: 220 YGKQPWYQLSNTEAIECITQGRE 242
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 7e-08
Identities = 86/379 (22%), Positives = 137/379 (36%), Gaps = 126/379 (33%)
Query: 479 KEIAKGSNGTVVLEGNYE---GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIV 530
KE+ +G+ G V N E +VA+K++ AL+E++ L H NI
Sbjct: 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNIT 65
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
Y D D V+ + N+L Y+ +EE + A L+++ IR
Sbjct: 66 CLY----DMDIVFPG------NFNEL-YL----YEELMEAD------LHQI-IR------ 97
Query: 591 NTKDIELWKANGHP--SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+G P A I+ GL ++H ++HRDLKP N+L++ D K
Sbjct: 98 ----------SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELK 145
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+ D G+++ + F Y ++
Sbjct: 146 ICDFGLARGFSEN--------------------------------PGENAGFMTEYVATR 173
Query: 709 W-QAPEQLLQGRQ-TRAIDLFSLGCIL---------------------FFCITGGKHPYG 745
W +APE +L + T+AID++S+GCIL + G P
Sbjct: 174 WYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGT--PDE 231
Query: 746 ESFERDA------------NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793
E+ R NI K + P A+DL +LL +P R + L
Sbjct: 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291
Query: 794 HPFFWTADTRLSFLRDVSD 812
HP+ L+ D D
Sbjct: 292 HPY-------LAIWHDPDD 303
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 8e-08
Identities = 68/285 (23%), Positives = 107/285 (37%), Gaps = 99/285 (34%)
Query: 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASD-------- 524
K + F KE+ G G VV G + G+ +DVA+K I+ S+
Sbjct: 4 KDLTFLKELGTGQFG-VVKYGKWRGQ-----------YDVAIKMIKEGSMSEDEFIEEAK 51
Query: 525 -----QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
H +V+ YGV + Q +Y+ E Y+ +G N L
Sbjct: 52 VMMKLSHEKLVQLYGVCTKQRPIYIVTE----------YMSNGCL----------LNYLR 91
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
E R P +QLL++ +D+ G+++L IHRDL +N L+
Sbjct: 92 EHGKRFQP------------------SQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV 133
Query: 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699
D C K+SD G+S+ + D Y S+ K
Sbjct: 134 --DDQGCVKVSDFGLSRYVLDDE---------------YTSSVGSK-------------- 162
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
F V W PE LL + + D+++ G +++ + GK PY
Sbjct: 163 FPV-----RWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 1e-07
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 80/248 (32%)
Query: 585 LLPVMENTKDIELWKANGHPSAQ--LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
++P M+ +L K GHP ++ + + ++ GL ++H G+IHRDLKP N+ +++D
Sbjct: 98 VMPYMQ----TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED 153
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
K+ D G+++ +M+
Sbjct: 154 CEL--KILDFGLARHADAEMT--------------------------------------- 172
Query: 703 GYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GK-------------- 741
GY + W +APE +L + +D++S+GCI+ +TG GK
Sbjct: 173 GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 232
Query: 742 HPYGESFER-----DANIVKD-----RKDLFLV--EHIPEAVDLFTRLLDPNPDLRPKAQ 789
P E ++ + +K RKD + + P+AVDL ++L+ + D R A
Sbjct: 233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292
Query: 790 NVLNHPFF 797
L HP+F
Sbjct: 293 EALEHPYF 300
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 73/344 (21%), Positives = 124/344 (36%), Gaps = 110/344 (31%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ------NLIASDQHPNIVRW 532
K + G+ G V L + +++ + LK+ Q ++ HP I+R
Sbjct: 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRL 66
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ E DQ F+Y+ +E YV G L + SN
Sbjct: 67 FWTEHDQRFLYMLME----------YVPGGELFSYLRNSGRFSNSTG------------- 103
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
L +IV L +LH +++RDLKP+N+L+ K+ KL+D
Sbjct: 104 ----------------LFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHI--KLTDF 145
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G +K+L+ D + +C G+ + AP
Sbjct: 146 GFAKKLR-DRT----------------------WTLC---------------GTPEYLAP 167
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITG-----GKHPYG---------ESFERDAN-IVKD 757
E + +A+D ++LG +++ + G +P+G F R + KD
Sbjct: 168 EVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKD 227
Query: 758 RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
LV VD RL +++ A +V NH +F + D
Sbjct: 228 LIKKLLV------VDRTRRL----GNMKNGADDVKNHRWFKSVD 261
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 65/223 (29%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
G P+ + + R + GL LH ++HRDLKP+N+L++ KL+D G+++
Sbjct: 104 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ--VKLADFGLAR----- 156
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT 721
+Y + L V+ T+ Y +APE LLQ
Sbjct: 157 ---------------IYSCQMALTPVVV-----------TLWY-----RAPEVLLQSTYA 185
Query: 722 RAIDLFSLGCIL--------FFCITGGKHPYGESFERDANIVKDR--KDLFLVEH----- 766
+D++S+GCI FC G+ F+ +D +D+ L
Sbjct: 186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPR 245
Query: 767 --------IPE----AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+PE L +L NP R A L HPFF
Sbjct: 246 GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 56/217 (25%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
Q+ + R+I+ GL +LH IHRD+K NVL+S+ KL+D G++ +L
Sbjct: 102 QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQL-------- 151
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
T ++ V G+ W APE + Q D+
Sbjct: 152 ---TDTQIKRNTFV------------------------GTPFWMAPEVIKQSAYDSKADI 184
Query: 727 FSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV-EHIPEAV---------DLFTR 776
+SLG I + G+ P+ E + K LFL+ ++ P + +
Sbjct: 185 WSLG-ITAIELAKGEPPHSE--------LHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 235
Query: 777 LLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
L+ P RP A+ +L H F + S+L ++ DR
Sbjct: 236 CLNKEPSFRPTAKELLKHKFIVRFAKKTSYLTELIDR 272
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 83/227 (36%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQN 668
+IV GL LHE G+I+RDLK NVL+ + K++D G+ K L G + C T +
Sbjct: 104 EIVLGLQFLHERGIIYRDLKLDNVLLDSE-GHI-KIADFGMCKEGILGGVTTSTFCGTPD 161
Query: 669 ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFS 728
Y+ APE L A+D ++
Sbjct: 162 ---------YI-------------------------------APEILSYQPYGPAVDWWA 181
Query: 729 LGCILFFCITGGKHPYGESFERDANIVKDRKDLF--LVE---HIP-----EAVDLFTRLL 778
LG +L + + G+ P FE D D +LF ++E P EA + L
Sbjct: 182 LG-VLLYEMLAGQSP----FEGD-----DEDELFQSILEDEVRYPRWLSKEAKSILKSFL 231
Query: 779 DPNPDLR----PKA-QNVLNHPFFWTADTRLSFLRDVSDRVELEDRE 820
NP+ R P Q++ HPFF R++ D +LE +E
Sbjct: 232 TKNPEKRLGCLPTGEQDIKGHPFF----------REI-DWDKLERKE 267
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 39/138 (28%)
Query: 523 SDQHPNIVRWYG--VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
S + P IV++YG ++ + +++E C GS + ++ +
Sbjct: 55 SCKSPYIVKYYGAFLDESSSSIGIAMEYCE----------GGSLD----------SIYKK 94
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS 640
V+ R + E L K+ ++ GLS+LH +IHRD+KP N+L++
Sbjct: 95 VKKRGGRIGEKV---------------LGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT 139
Query: 641 KDKSFCAKLSDMGISKRL 658
+ KL D G+S L
Sbjct: 140 RKGQ--VKLCDFGVSGEL 155
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 48/183 (26%)
Query: 480 EIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWY 533
+I +G+ GTV N E VA+KR+ D AL+EI L+ +H NIVR Y
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI-CLLKELKHKNIVRLY 65
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
V + L E C L +G + ++ V+ +
Sbjct: 66 DVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEI------------VKSFMF------- 106
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
QLLK GL+ H ++HRDLKPQN+LI+K+ KL+D G
Sbjct: 107 -------------QLLK-------GLAFCHSHNVLHRDLKPQNLLINKNGEL--KLADFG 144
Query: 654 ISK 656
+++
Sbjct: 145 LAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 2e-07
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 81/236 (34%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ GL ++H G+IHRDLKP N+ +++D K+ D G++++ +M+
Sbjct: 127 MLKGLKYIHAAGIIHRDLKPGNLAVNEDCEL--KILDFGLARQTDSEMT----------- 173
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQG-RQTRAIDLFSLGCI 732
GY + W +APE +L T+ +D++S+GCI
Sbjct: 174 ----------------------------GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCI 205
Query: 733 LFFCIT------GGKH-------------PYGESFER----DA-NIVK-----DRKDL-- 761
+ +T G H P E ++ DA N VK +KD
Sbjct: 206 MAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS 265
Query: 762 FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
L P AV++ ++L + + R A L HP+F D D E
Sbjct: 266 LLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF-------EEFHDPEDETEAP 314
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 52/207 (25%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660
G P L ++T +V GL L E +IHRD+KP NVL++ + KL D G+S
Sbjct: 98 GIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ--VKLCDFGVSGN--- 152
Query: 661 DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ 720
LV+ L K I G + APE++ G
Sbjct: 153 ------------------LVASLAKTNI----------------GCQSYMAPERIKSGGP 178
Query: 721 TRAI------DLFSLGCILFFCITGGKHPY-----GESFERDANIVKDRKDLFLVEHIPE 769
+ D++SLG + G++PY F + + IV + +
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMAL-GRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDD 237
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPF 796
A D + L+ P+ RP +L HP+
Sbjct: 238 AQDFVAKCLNKIPNRRPTYAQLLEHPW 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 475 VVFNKEIAKGSNGTVV---LEGNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQH 526
+ F I +G+ G V+ ++ + + A+K L + H D A E++ L H
Sbjct: 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFA-GELEVLCKLGHH 62
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
PNI+ G ++ ++Y+++E Y G NLL+ +R +
Sbjct: 63 PNIINLLGACENRGYLYIAIE----------YAPYG-------------NLLDFLRKSRV 99
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
+ E A+ S QLL+ D+ +G+ +L E IHRDL +NVL+ ++
Sbjct: 100 LETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LA 157
Query: 647 AKLSDMGISK 656
+K++D G+S+
Sbjct: 158 SKIADFGLSR 167
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 40/189 (21%)
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
T +++ L +LH+ +I+RDLKP+N+L+ D L D G+ K +M + T
Sbjct: 99 TAELLCALENLHKFNVIYRDLKPENILL--DYQGHIALCDFGLCKL---NMKDDDKTNT- 152
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 731
C G+ + APE LL T+A+D ++LG
Sbjct: 153 ----------------FC---------------GTPEYLAPELLLGHGYTKAVDWWTLGV 181
Query: 732 ILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR---PKA 788
+L+ +TG Y E+ + F +A DL LL +P R A
Sbjct: 182 LLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGA 241
Query: 789 QNVLNHPFF 797
Q + NHPFF
Sbjct: 242 QEIKNHPFF 250
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 66/276 (23%), Positives = 100/276 (36%), Gaps = 86/276 (31%)
Query: 479 KEIAKGSNGTV-----VLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIV 530
K + G+ GTV + EG VA+K L + A KEI + ++AS HP++V
Sbjct: 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLI--YVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
R G+ C S LI + G LL+ VR
Sbjct: 73 RLLGI-------------CLSSQVQLITQLMPLGC-------------LLDYVR------ 100
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ +I S LL I G+S+L E L+HRDL +NVL+ + K
Sbjct: 101 -NHKDNIG--------SQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH--VK 149
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D G++K L D + ++
Sbjct: 150 ITDFGLAKLLDVDEKEYHAEGGKVPIK--------------------------------- 176
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E +L T D++S G ++ +T G PY
Sbjct: 177 WMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 68/269 (25%), Positives = 106/269 (39%), Gaps = 100/269 (37%)
Query: 481 IAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHD------VALKEIQNLIASDQHPN 528
I +G+ G V Y R VA+K+ V+ ++ +L+EI L+ +HPN
Sbjct: 15 IGEGTYGIV-----YRARDTTSGEIVALKK-VRMDNERDGIPISSLREITLLLNL-RHPN 67
Query: 529 IVRWYGVESDQ--DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
IV V + D ++L +E C L L+ + F E
Sbjct: 68 IVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSE-------------------- 107
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
+Q+ + ++ GL +LHE +IHRDLK N+L++ DK C
Sbjct: 108 -------------------SQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT-DKG-C 146
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K++D G++ R G A M ++V L
Sbjct: 147 LKIADFGLA-RTYGLP------AKPMTPKVVTL--------------------------- 172
Query: 707 SGW-QAPEQLLQGR-QTRAIDLFSLGCIL 733
W +APE LL T AID++++GCIL
Sbjct: 173 --WYRAPELLLGCTTYTTAIDMWAVGCIL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 3e-07
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 76/229 (33%)
Query: 605 SAQLLKV-TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-KLSDMGISKRLQGDM 662
S+ +KV I+ GL +LH G++HRD+KP N+L++ + C K+ D G+++ + D
Sbjct: 101 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEPDE 157
Query: 663 SC-LTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ- 720
S +TQ E V Q+ ++APE L+ R
Sbjct: 158 SKHMTQ----------------------EVVTQY-------------YRAPEILMGSRHY 182
Query: 721 TRAIDLFSLGCILFFCITGGK--------------------HPYGESFE----------- 749
T A+D++S+GCI F + G + P E+
Sbjct: 183 TSAVDIWSVGCI-FAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHIL 241
Query: 750 RDANIVKDRKDLFLV--EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
R + L+ + + EAV L R+L +PD R A + L HP+
Sbjct: 242 RGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 42/195 (21%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
P Q+ + I+ GL+HLH ++HRD+K N+ + + K+ D+G++K L D +
Sbjct: 99 PEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN--VKIGDLGVAKLL-SDNT 155
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
G L +PE
Sbjct: 156 NFANTIVGTPYYL----------------------------------SPELCEDKPYNEK 181
Query: 724 IDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL---VEHIPEAVDLFTRLLDP 780
D+++LG +L+ C T GKHP+ ++ + A I+K + +F + + L + L
Sbjct: 182 SDVWALGVVLYECCT-GKHPF-DANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 781 NPDLRPKAQNVLNHP 795
+ RP +L +P
Sbjct: 240 DYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 64/301 (21%), Positives = 110/301 (36%), Gaps = 65/301 (21%)
Query: 500 VAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDL 556
VAVK L + + Q L+A HPNIV+ GV + + L E
Sbjct: 38 VAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFE--------- 88
Query: 557 IYVLSGSFEEQL---NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613
Y+ G E L + + Q S + R N + + L + +
Sbjct: 89 -YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCG--LNPLPLS--------CTEQLCIAK 137
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGDMSCLTQNATGM 672
+ +G+++L E +HRDL +N L+ ++ K++D G+S+ + D ++N
Sbjct: 138 QVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSADYYKASEND--- 192
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 732
+ I W PE + R T D+++ G +
Sbjct: 193 ------AIPIR-------------------------WMPPESIFYNRYTTESDVWAYGVV 221
Query: 733 LFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP-EAVDLFTRLLDPNPDLRPKAQN 790
L+ + G PY G + E V+D L ++ P E +L P RP +
Sbjct: 222 LWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281
Query: 791 V 791
+
Sbjct: 282 I 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QL+ + R I +G+ +L E+ +HRDL +N+L+ + + K+SD G+S+ L+ D S T
Sbjct: 107 QLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV--NSNLVCKVSDFGLSRFLEDDTSDPT 164
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
Y S+ K+ I W APE + + T A D+
Sbjct: 165 -----------YTSSLGGKIPI-------------------RWTAPEAIAYRKFTSASDV 194
Query: 727 FSLGCILFFCITGGKHPYGESFERD 751
+S G +++ ++ G+ PY + +D
Sbjct: 195 WSYGIVMWEVMSYGERPYWDMSNQD 219
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 4e-07
Identities = 72/329 (21%), Positives = 128/329 (38%), Gaps = 93/329 (28%)
Query: 480 EIAKGSNGTVVL-EGNYEGRSVAVKRL---VKTHHDVALKEIQNLIASD-QHPNIVRWYG 534
+I +GS G V + + GR VAVK + + ++ E+ +I D QH N+V Y
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEV--VIMRDYQHQNVVEMYK 85
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ +++ +E ++ G+ ++++++ R+
Sbjct: 86 SYLVGEELWVLME----------FLQGGAL----------TDIVSQTRLN---------- 115
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
Q+ V ++ L +LH G+IHRD+K ++L++ D KLSD G
Sbjct: 116 ----------EEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR--VKLSDFGF 163
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ D V LV G+ W APE
Sbjct: 164 CAQISKD------------------VPKRKSLV-----------------GTPYWMAPEV 188
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDR-----KDLFLVEHIP 768
+ + +D++SLG I+ + G+ PY +S + ++D K+ + P
Sbjct: 189 ISRTPYGTEVDIWSLG-IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKIS--P 245
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D R+L P R AQ +L+HPF
Sbjct: 246 VLRDFLERMLTREPQERATAQELLDHPFL 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 58/218 (26%), Positives = 80/218 (36%), Gaps = 76/218 (34%)
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
T ++V L +H +G IHRD+KP N+L+ DKS KL+D G +C+ +A G
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDNMLL--DKSGHLKLADFG---------TCMKMDANG 196
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT----RAIDLF 727
M V C+ G+ + +PE L R D +
Sbjct: 197 M--------------VRCD-----------TAVGTPDYISPEVLKSQGGDGYYGRECDWW 231
Query: 728 SLGCILFFCITGGKHPYGES----------------FERDANIVKDRKDL---FLVEHIP 768
S+G L+ + G Y +S F D I K KDL FL
Sbjct: 232 SVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL----- 286
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF----WTADT 802
D RL R + +HPFF WT D
Sbjct: 287 --TDREVRL------GRNGVDEIKSHPFFKNDQWTFDN 316
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 79/265 (29%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV-ESDQ 539
I KG G V+L G+Y G VAVK + A +++ +H N+V+ GV ++
Sbjct: 14 IGKGEFGDVML-GDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 72
Query: 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599
+Y+ E Y+ GS L++ +R R V+
Sbjct: 73 GGLYIVTE----------YMAKGS-------------LVDYLRSRGRSVLGGDC------ 103
Query: 600 ANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659
LLK + D+ + +L +HRDL +NVL+S+D AK+SD G++K
Sbjct: 104 --------LLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEAS 153
Query: 660 GDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR 719
TQ+ + ++ W APE L + +
Sbjct: 154 S-----TQDTGKLPVK---------------------------------WTAPEALREKK 175
Query: 720 QTRAIDLFSLGCILFFCITGGKHPY 744
+ D++S G +L+ + G+ PY
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 51/219 (23%), Positives = 79/219 (36%), Gaps = 62/219 (28%)
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDM---SCLTQNA 669
I++GL+ LH+ +HRDL P N+ I+ K C K++D G+++R +
Sbjct: 126 LQILNGLNVLHKWYFMHRDLSPANIFIN-SKGIC-KIADFGLARRYGYPPYSDTLSKDET 183
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG--RQTRAIDLF 727
++ V L W +LL G + A+D++
Sbjct: 184 MQRREEMTSKVVTL-------------------------WYRAPELLMGAEKYHFAVDMW 218
Query: 728 SLGCILFFCITGGKHPYGES-----------------------------FERDANIVKDR 758
S+GCI +TG GE+ E KD
Sbjct: 219 SVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL 278
Query: 759 KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
K +F +A+DL LL NP R A+ L H +F
Sbjct: 279 KTIFPNAS-DDAIDLLQSLLKLNPLERISAKEALKHEYF 316
|
Length = 335 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 6e-07
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 46/189 (24%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASD-QHPNIVRWYGV 535
+ I G+ G V N +A +++K D A+ + + ++ D +H NIV ++G
Sbjct: 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGS 74
Query: 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+D +++ +E C SL D IY ++G E
Sbjct: 75 YLRRDKLWICMEFCGGGSLQD-IYHVTGPLSE---------------------------- 105
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+Q+ V+R+ + GL +LH G +HRD+K N+L++ + KL+D G+
Sbjct: 106 -----------SQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH--VKLADFGV 152
Query: 655 SKRLQGDMS 663
S ++ ++
Sbjct: 153 SAQITATIA 161
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 6e-07
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 67/249 (26%)
Query: 501 AVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLND 555
A+KR+ + H D A E++ L HPNI+ G + ++YL++E
Sbjct: 38 AIKRMKEYASKDDHRDFA-GELEVLCKLGHHPNIINLLGACEHRGYLYLAIE-------- 88
Query: 556 LIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615
Y G NLL+ +R + + I A+ S QLL D+
Sbjct: 89 --YAPHG-------------NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133
Query: 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQ 675
G+ +L + IHRDL +N+L+ ++ + AK++D G+S+ Q
Sbjct: 134 ARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG-----------------Q 174
Query: 676 LVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFF 735
VY+ + +L + W A E L T D++S G +L+
Sbjct: 175 EVYVKKTMGRLPV-------------------RWMAIESLNYSVYTTNSDVWSYGVLLWE 215
Query: 736 CITGGKHPY 744
++ G PY
Sbjct: 216 IVSLGGTPY 224
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 6e-07
Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 48/202 (23%)
Query: 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLV 677
L HLH +G+I+RDLKP+N+L+ D+ KL+D G+SK D + G
Sbjct: 110 ALDHLHSLGIIYRDLKPENILL--DEEGHIKLTDFGLSKESI-DHEKKAYSFCG------ 160
Query: 678 YLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCI 737
TV Y APE + + T++ D +S G ++F +
Sbjct: 161 -----------------------TVEY-----MAPEVVNRRGHTQSADWWSFGVLMFEML 192
Query: 738 TGGKHPYGESFERDAN-IVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKA-----Q 789
TG G+ + I+K + + FL PEA L L NP R A +
Sbjct: 193 TGSLPFQGKDRKETMTMILKAKLGMPQFLS---PEAQSLLRALFKRNPANRLGAGPDGVE 249
Query: 790 NVLNHPFFWTADTRLSFLRDVS 811
+ HPFF T D + R++
Sbjct: 250 EIKRHPFFSTIDWNKLYRREIK 271
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 6e-07
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 51/213 (23%)
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QG 660
G + + +I GL LH +++RDLKP+N+L+ D ++SD+G++ + +G
Sbjct: 98 GFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL--DDYGHIRISDLGLAVEIPEG 155
Query: 661 DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ 720
+ + G TVGY APE + R
Sbjct: 156 E---TIRGRVG-----------------------------TVGY-----MAPEVVKNERY 178
Query: 721 TRAIDLFSLGCILFFCITGGKHP---YGESFERDA--NIVKDRKDLFLVEHIPEAVDLFT 775
T + D + LGC+++ I GK P E +R+ VK+ ++ + + A +
Sbjct: 179 TFSPDWWGLGCLIYEMIE-GKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR 237
Query: 776 RLLDPNPDLR-----PKAQNVLNHPFFWTADTR 803
+LL +P R A+ V HPFF TA+ +
Sbjct: 238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 7e-07
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 53/196 (27%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGDMSCLTQNATGM 672
+I+ GL LH ++RDLKP+N+L+ ++SD+G++ ++ +G+ + G
Sbjct: 110 EILCGLEDLHRENTVYRDLKPENILLDDYGHI--RISDLGLAVKIPEGE---SIRGRVG- 163
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 732
TVGY APE L R T + D + LGC+
Sbjct: 164 ----------------------------TVGY-----MAPEVLNNQRYTLSPDYWGLGCL 190
Query: 733 LFFCITGGKHPYGESFER------DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR- 785
++ I G+ P+ E+ D +++ ++++ + EA + LL +P R
Sbjct: 191 IYEMIE-GQSPFRGRKEKVKREEVDRRVLET-EEVYSAKFSEEAKSICKMLLTKDPKQRL 248
Query: 786 ----PKAQNVLNHPFF 797
A V HPFF
Sbjct: 249 GCQEEGAGEVKRHPFF 264
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 1e-06
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 52/193 (26%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
+V GL +LHE +++RDLK N+L+ + K++D G+ K M + +T
Sbjct: 110 VVLGLQYLHENKIVYRDLKLDNLLLDTEGFV--KIADFGLCKE---GMGFGDRTST---- 160
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
C G+ + APE L + TRA+D + LG +L
Sbjct: 161 -------------FC---------------GTPEFLAPEVLTETSYTRAVDWWGLG-VLI 191
Query: 735 FCITGGKHPY-GESFER--DANIVKD--RKDLFLVEHIPEAVDLFTRLLDPNPDLR---- 785
+ + G+ P+ G+ E D+ IV D R FL EA+ + RLL NP+ R
Sbjct: 192 YEMLVGESPFPGDDEEEVFDS-IVNDEVRYPRFLSR---EAISIMRRLLRRNPERRLGSG 247
Query: 786 PK-AQNVLNHPFF 797
K A++V PFF
Sbjct: 248 EKDAEDVKKQPFF 260
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 85/262 (32%)
Query: 490 VLEGNYEGRS-VAVKRL---VKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545
V EG ++ R VA+K L KE+Q L +H +++ + V
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQAL-KRLRHKHLISLFAV---------- 70
Query: 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPS 605
CS+ + +Y+++ +L K L ++LPV
Sbjct: 71 -----CSVGEPVYIIT-----ELMEKGSLLAFLRSPEGQVLPV----------------- 103
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
A L+ + + G+++L E IHRDL +N+L+ +D K++D G+++ ++ D
Sbjct: 104 ASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKED---- 157
Query: 666 TQNATGMDLQLVYLVS---ILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR 722
VYL S I K W APE G +
Sbjct: 158 -----------VYLSSDKKIPYK-----------------------WTAPEAASHGTFST 183
Query: 723 AIDLFSLGCILFFCITGGKHPY 744
D++S G +L+ T G+ PY
Sbjct: 184 KSDVWSFGILLYEMFTYGQVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 80/274 (29%)
Query: 473 KLVVFNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVK-THHDVALKEIQNLIASDQHPNIV 530
KLV K++ G G V + G Y G VA+K L + + A NL+ QHP +V
Sbjct: 9 KLV---KKLGAGQFGEVWM-GYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLV 64
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R Y V + Q+ +Y+ E Y+ +GS + L E
Sbjct: 65 RLYAVVT-QEPIYIITE----------YMENGSLVDFLKTPE------------------ 95
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ + K L+ + I G++ + IHRDL+ N+L+S ++ C K++
Sbjct: 96 -GIKLTINK--------LIDMAAQIAEGMAFIERKNYIHRDLRAANILVS--ETLCCKIA 144
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+++ ++ + E + G F W
Sbjct: 145 DFGLARLIEDN----------------------------EYTAREGAKF------PIKWT 170
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
APE + G T D++S G +L +T G+ PY
Sbjct: 171 APEAINYGTFTIKSDVWSFGILLTEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 74/320 (23%), Positives = 125/320 (39%), Gaps = 91/320 (28%)
Query: 479 KEIAKGSNGTVVLEGNYEGR------SVAVKRLVKT-HHDVALKEIQN--LIASDQHPNI 529
+ I +G+ G V + GR VAVK +T D+ K +Q ++ HPNI
Sbjct: 1 ERIGRGNFGEV-----FSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 55
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE-VRIRLLPV 588
VR GV + + +Y+ +E V G F + L E R+++
Sbjct: 56 VRLIGVCTQKQPIYIVME----------LVQGGDFL---------TFLRTEGPRLKV--- 93
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+L+++ + +G+ +L IHRDL +N L+++ K
Sbjct: 94 -----------------KELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVL--K 134
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+SD G+S+ + G VY + +K + +
Sbjct: 135 ISDFGMSR----------EEEDG-----VYASTGGMKQIPVK------------------ 161
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHI 767
W APE L GR + D++S G +L+ + G PY S ++ ++ L E
Sbjct: 162 WTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELC 221
Query: 768 PEAV-DLFTRLLDPNPDLRP 786
P+AV L R + +P RP
Sbjct: 222 PDAVYRLMERCWEYDPGQRP 241
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-06
Identities = 54/225 (24%), Positives = 82/225 (36%), Gaps = 74/225 (32%)
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG----ISKRLQGDMSCL 665
KV + +++GL ++H ++HRD+K N+LI+KD KL+D G S +
Sbjct: 123 KVMKMLLNGLYYIHRNKILHRDMKAANILITKDGIL--KLADFGLARAFSLSKNSKPNRY 180
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAI 724
T ++V T+ Y + PE LL R I
Sbjct: 181 TN-----------------RVV-------------TLWY-----RPPELLLGERDYGPPI 205
Query: 725 DLFSLGCIL-----------------------FFC--ITGGKHPYGESFERDANIV---- 755
D++ GCI+ C IT P + E +
Sbjct: 206 DMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQG 265
Query: 756 -KDRKDLFLVEHI--PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
K + L ++ P A+DL +LL +P R A LNH FF
Sbjct: 266 QKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-06
Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 47/247 (19%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI---------SKRLQ-GDMS 663
++ + +H++G IHRD+KP N+LI +D KL+D G+ SK Q GD
Sbjct: 109 ELTCAIESVHKMGFIHRDIKPDNILIDRDGHI--KLTDFGLCTGFRWTHDSKYYQKGDHH 166
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
Q++ + + LK + Q G+ + APE LL+ T+
Sbjct: 167 --RQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 224
Query: 724 IDLFSLGCILFFCITGGKHPY--GESFERDANIVKDRKDLFLVEHIP-------EAVDLF 774
D +S+G IL+ + G+ P+ E ++ L HIP EA DL
Sbjct: 225 CDWWSVGVILYEMLV-GQPPFLADTPAETQLKVINWETTL----HIPSQAKLSREASDLI 279
Query: 775 TRLLDPNPDLR---PKAQNVLNHPFFWTAD-------------TRLSFLRDVS--DRVEL 816
RL + R A + HPFF D +++ D S D V+
Sbjct: 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIRRQKAPYIPKITHPTDTSNFDPVDP 338
Query: 817 EDRESDS 823
E SD
Sbjct: 339 EKLRSDD 345
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 79/354 (22%), Positives = 131/354 (37%), Gaps = 125/354 (35%)
Query: 477 FNKEIAKGSNGTVVL----EGNYEGRSVAVKRLVKTH--------HDVALKEIQNLIASD 524
F + + GS G V+L ++ VA+KR K+ H + ++I N I
Sbjct: 34 FIRTLGTGSFGRVILATYKNEDFP--PVAIKRFEKSKIIKQKQVDHVFSERKILNYI--- 88
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
HP V YG D+ ++YL LE +V+ G F L ++ N
Sbjct: 89 NHPFCVNLYGSFKDESYLYLVLE----------FVIGGEFFTFLRRNKRFPN-------- 130
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
D+ + A AQ++ + +L + +++RDLKP+N+L+ KD
Sbjct: 131 ---------DVGCFYA-----AQIVLI-------FEYLQSLNIVYRDLKPENLLLDKDGF 169
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K++D G +K + T+ T +C
Sbjct: 170 I--KMTDFGFAKVVD------TRTYT-----------------LC--------------- 189
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
G+ + APE LL +A D ++LG ++ + G Y + L +
Sbjct: 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN------------EPLLIY 237
Query: 765 EHIPEAVDLFTRLLDPN-----------------PDLRPKAQNVLNHPFFWTAD 801
+ I E + F + LD N +L+ AQNV HP+F D
Sbjct: 238 QKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291
|
Length = 340 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 57/191 (29%)
Query: 479 KEIAKGSNGTVV-LEGNYEGRSVAVKRL-------VKTHHDVALKEIQNLIASDQHPNIV 530
K+I KG V +GR VA+K++ K D LKEI +L+ HPN++
Sbjct: 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQD-CLKEI-DLLKQLDHPNVI 65
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVL----SGSFEEQL-NAKEQDSNLLNEVRIRL 585
++ F+ N+L VL +G + + K+Q RL
Sbjct: 66 KYLA-----SFIEN---------NELNIVLELADAGDLSRMIKHFKKQK---------RL 102
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+P E T +WK + S L H+H ++HRD+KP NV I+
Sbjct: 103 IP--ERT----IWK-----------YFVQLCSALEHMHSKRIMHRDIKPANVFITATGVV 145
Query: 646 CAKLSDMGISK 656
KL D+G+ +
Sbjct: 146 --KLGDLGLGR 154
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 85/364 (23%), Positives = 141/364 (38%), Gaps = 129/364 (35%)
Query: 479 KEIAKGSNGTVVLEGNYEGR------SVAVKRLVKTHHD-----VALKEIQNLIASDQHP 527
++I +G+ G V Y+ R ++A+K++ D A++EI +L+ QH
Sbjct: 8 EKIGEGTYGVV-----YKARDRVTNETIALKKIRLEQEDEGVPSTAIREI-SLLKEMQHG 61
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NIVR V + +YL E Y+ L+ K+
Sbjct: 62 NIVRLQDVVHSEKRLYLVFE----------YL-------DLDLKKH-------------- 90
Query: 588 VMENTKDIELWKANGHPSAQLLKV-TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
M+++ D A +L+K I+ G+++ H ++HRDLKPQN+LI + +
Sbjct: 91 -MDSSPDF----AKNP---RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-A 141
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
KL+D G+++ F V FT +
Sbjct: 142 LKLADFGLAR-----------------------------------AFGIPVRTFTHEVVT 166
Query: 707 SGWQAPEQLLQGRQ-TRAIDLFSLGCI---------LF------------FCITGGKHPY 744
++APE LL R + +D++S+GCI LF F I G P
Sbjct: 167 LWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGT--PN 224
Query: 745 GESFERDANIVKDRKDLF----------LVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLN 793
E++ + D K F +V + P VDL +++L +P R A+ L
Sbjct: 225 EETW-PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283
Query: 794 HPFF 797
H +F
Sbjct: 284 HEYF 287
|
Length = 294 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 62/278 (22%), Positives = 98/278 (35%), Gaps = 89/278 (32%)
Query: 479 KEIAKGSNGTVVLEG---NYEGR--SVAVK-----RLVKTHHDVALKEIQNLIASDQHPN 528
K++ GS G VV G G+ VAVK +L D LKE ++ S H N
Sbjct: 1 KKLGDGSFG-VVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDF-LKEA-AIMHSLDHEN 57
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++R YGV + ++ E GS ++L + + L+
Sbjct: 58 LIRLYGVVLTHPLMMVT-ELAPL----------GSLLDRLR--------KDALGHFLIST 98
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
L + Q I +G+ +L IHRDL +N+L++ D K
Sbjct: 99 --------LC----DYAVQ-------IANGMRYLESKRFIHRDLAARNILLASDDK--VK 137
Query: 649 LSDMGISKRL--QGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
+ D G+ + L D Y++ LK+
Sbjct: 138 IGDFGLMRALPQNEDH---------------YVMEEHLKVPF------------------ 164
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L + A D++ G L+ T G+ P+
Sbjct: 165 -AWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPW 201
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 3e-06
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 50/203 (24%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
P L ++ +V GL++L + ++HRD+KP N+L++ KL D G+S +
Sbjct: 93 PEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ--VKLCDFGVSTQ------ 144
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
LV+ + K + G++ + APE++ +
Sbjct: 145 ---------------LVNSIAKTYV----------------GTNAYMAPERISGEQYGIH 173
Query: 724 IDLFSLGCILFFCITGGKHPYGESFERDANIV----------KDRKDLFLVEHIPEAVDL 773
D++SLG I F + G+ PY + + +++ +D L + + + V
Sbjct: 174 SDVWSLG-ISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232
Query: 774 FTRLLDPNPDLRPKAQNVLNHPF 796
T+ + P RP +N+++HPF
Sbjct: 233 ITQCMRKQPKERPAPENLMDHPF 255
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 509 HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQL 568
H D A E++ L HPNI+ G + ++YL++E Y G
Sbjct: 39 HRDFA-GELEVLCKLGHHPNIINLLGACEHRGYLYLAIE----------YAPHG------ 81
Query: 569 NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628
NLL+ +R + + I A+ S QLL D+ G+ +L + I
Sbjct: 82 -------NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFI 134
Query: 629 HRDLKPQNVLISKDKSFCAKLSDMGISK 656
HRDL +N+L+ ++ + AK++D G+S+
Sbjct: 135 HRDLAARNILVGEN--YVAKIADFGLSR 160
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 599 KANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
K N + + R+I+ GLSHLH+ +IHRD+K QNVL++++ KL D G+S +L
Sbjct: 104 KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQL 161
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 34/142 (23%)
Query: 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC 664
S QL+ + R I +G+ +L ++ +HRDL +N+L+ + + K+SD G+S+ L+ D
Sbjct: 106 SYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV--NSNLECKVSDFGLSRVLEDDPEG 163
Query: 665 LTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAI 724
+ G K+ I W APE + + T A
Sbjct: 164 TYTTSGG-------------KIPI-------------------RWTAPEAIAYRKFTSAS 191
Query: 725 DLFSLGCILFFCITGGKHPYGE 746
D++S G +++ ++ G+ PY +
Sbjct: 192 DVWSFGIVMWEVMSFGERPYWD 213
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 59/210 (28%)
Query: 470 RIGKLVVFN------------KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEI 517
GK ++F+ + I KG+ G V N + S A +++ HD+ +EI
Sbjct: 3 LSGKTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID-EEI 61
Query: 518 QN----LIASDQHPNIVRWYGVESDQDFV-----YLSLERCTCSLNDLIYVLSGSFEEQL 568
+ L A HPN+V++YG+ +D +L LE C GS + +
Sbjct: 62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCN----------GGSVTDLV 111
Query: 569 NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628
+ + E I + + + GL HLH I
Sbjct: 112 KGFLKRGERMEEPIIAY-------------------------ILHEALMGLQHLHVNKTI 146
Query: 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
HRD+K N+L++ + KL D G+S +L
Sbjct: 147 HRDVKGNNILLTTEGG--VKLVDFGVSAQL 174
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IVS L +LH +++RD+K +N+++ KD K++D G+ K +G ++ AT
Sbjct: 103 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHI--KITDFGLCK--EG----ISDGAT--- 151
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G+ + APE L RA+D + LG ++
Sbjct: 152 -----------MKTFC---------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185
Query: 734 FFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR-----PKA 788
+ + G Y + ER ++ + F PEA L LL +P R A
Sbjct: 186 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 245
Query: 789 QNVLNHPFF 797
+ V+ H FF
Sbjct: 246 KEVMEHRFF 254
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 58/199 (29%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I+ GL LH+ G+I+RDLK NVL+ KD K++D G+ K +N G
Sbjct: 104 EIICGLQFLHKKGIIYRDLKLDNVLLDKDGHI--KIADFGMCK----------ENMNGEG 151
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
+ C G+ + APE L + ++D +S G +L
Sbjct: 152 KASTF----------C---------------GTPDYIAPEILKGQKYNESVDWWSFGVLL 186
Query: 734 FFCITGGKHPYGESFERDANIVKDRKDLF---LVE--HIP-----EAVDLFTRLLDPNPD 783
+ + G +GE D +LF L + H P EA D ++L + +P
Sbjct: 187 YEMLIGQSPFHGE----------DEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPT 236
Query: 784 LR-PKAQNVLNHPFFWTAD 801
R ++ HPFF D
Sbjct: 237 KRLGVDGDIRQHPFFRGID 255
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 58/227 (25%), Positives = 87/227 (38%), Gaps = 80/227 (35%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-KLSDMGISKRLQGDMSCL 665
QLL+ L ++H + HRDLKP+N+L + D C K+ D G+++ D
Sbjct: 111 QLLR-------ALKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVAFNDTP-- 158
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQL--LQGRQTR 722
+F+T Y ++ W +APE + T
Sbjct: 159 ------------------------------TAIFWT-DYVATRWYRAPELCGSFFSKYTP 187
Query: 723 AIDLFSLGCILFFCITG-----GKH--------------PYGESFERDANIVKDRKDLFL 763
AID++S+GCI +TG GK+ P E+ R N K R+ L
Sbjct: 188 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN-EKARRYLSS 246
Query: 764 VEHI-------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ P A+ L RLL +P RP A+ L P+F
Sbjct: 247 MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 4e-06
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 595 IELWKANGH--PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+E K G Q+ + ++ G+ ++H+ ++HRDLK +N+ + + K+ D
Sbjct: 93 LEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---LLKIGDF 149
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+S+ L G SC DL T G+ + +P
Sbjct: 150 GVSRLLMG--SC--------DLA-------------------------TTFTGTPYYMSP 174
Query: 713 EQLL-QGRQTRAIDLFSLGCILF-FCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPE 769
E L QG +++ D++SLGCIL+ C H + G++F + + L E
Sbjct: 175 EALKHQGYDSKS-DIWSLGCILYEMCCL--AHAFEGQNFLSVVLRIVEGPTPSLPETYSR 231
Query: 770 AVD-LFTRLLDPNPDLRPKAQNVLNHPF 796
++ + +L+ +P LRP A +L +PF
Sbjct: 232 QLNSIMQSMLNKDPSLRPSAAEILRNPF 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 4e-06
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 33/196 (16%)
Query: 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVS 681
+H++G IHRD+KP N+L+ D KLSD G+ L+ T L + +
Sbjct: 117 IHKLGYIHRDIKPDNLLL--DAKGHIKLSDFGLCTGLKKSHR------TEFYRILSHALP 168
Query: 682 ILLKLVICECVFQFGVL-----------FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLG 730
I + + + TV G+ + APE LQ + D +SLG
Sbjct: 169 SNFLDFISKPMSSKRKAETWKRNRRALAYSTV--GTPDYIAPEVFLQTGYNKECDWWSLG 226
Query: 731 CILFFCITGGKHP---YGESFERDANIVKDRKDLFLVEHIP---EAVDLFTRLLDPNPDL 784
I++ + G +P E I+ ++ L + +P EA DL RL +
Sbjct: 227 VIMYEMLVG--YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC-CEAER 283
Query: 785 R---PKAQNVLNHPFF 797
R + +HPFF
Sbjct: 284 RLGNNGVNEIKSHPFF 299
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 4e-06
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I+ GL H+H +++RDLKP N+L+ D+ ++SD+G L D S +A+
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLG----LACDFSKKKPHAS--- 155
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCI 732
G+ G+ APE L +G + D FSLGC+
Sbjct: 156 ------------------------------VGTHGYMAPEVLQKGTAYDSSADWFSLGCM 185
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFL-VE----HIPEAVDLFTRLLDPNPDLR-- 785
LF + G P+ + +D + + DR L + VE PE L LL + R
Sbjct: 186 LFKLLR-GHSPFRQHKTKDKHEI-DRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLG 243
Query: 786 ---PKAQNVLNHPFFWTADTRLSFLR 808
AQ V H FF D + +L+
Sbjct: 244 CLGRGAQEVKEHVFFKGIDWQQVYLQ 269
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QL+ + I G++++ + IHRDL+ N+L+ + K++D G+++ ++ +
Sbjct: 103 QLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIEDNEYTAR 160
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
Q A +F + W APE L GR T D+
Sbjct: 161 QGA------------------------KFPI----------KWTAPEAALYGRFTIKSDV 186
Query: 727 FSLGCILFFCITGGKHPYGESFERDANIVKDRK-DLFLVEHIPEAV-DLFTRLLDPNPDL 784
+S G +L +T G+ PY R+ +R + + PE++ +L +PD
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDE 246
Query: 785 RP 786
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 48/212 (22%), Positives = 78/212 (36%), Gaps = 55/212 (25%)
Query: 610 KVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQN 668
K+ +V GL++L+ + ++HRD+KP N+L++ KL D G+S L
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI--KLCDFGVSGEL---------- 154
Query: 669 ATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFS 728
+ SI V G+S + +PE++ G+ T D++S
Sbjct: 155 ----------INSIADTFV-----------------GTSTYMSPERIQGGKYTVKSDVWS 187
Query: 729 LGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI--------------PEAVDLF 774
LG + GK P+ S D L L++ I + D
Sbjct: 188 LGISIIELAL-GKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFV 246
Query: 775 TRLLDPNPDLRPKAQNVLNHPFFWTADTRLSF 806
L +P RP Q + P F A +
Sbjct: 247 DACLLKDPTERPTPQQLCAMPPFIQALRASNV 278
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 5e-06
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 63/269 (23%)
Query: 481 IAKGSNGTVVLEGNYE---GRSVAVKRLVKTHHDVA------LKEIQNLIASD-QHPNIV 530
I KG G V L Y+ R VA+K++ + + L+E + IA+D HP IV
Sbjct: 10 IGKGGMGEVYLA--YDPVCSRRVALKKIREDLSENPLLKKRFLREAK--IAADLIHPGIV 65
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQL-NAKEQDSNLLNEVRIRLLPVM 589
Y + SD D VY ++ Y+ + + L + +++S L
Sbjct: 66 PVYSICSDGDPVYYTMP----------YIEGYTLKSLLKSVWQKES----------LS-- 103
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
K++ A L + I + + ++H G++HRDLKP N+L+ +
Sbjct: 104 ---KEL----AEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE--VVI 154
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
D G + + + L ++I K+V G+ +
Sbjct: 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIV-----------------GTPDY 197
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCIT 738
APE+LL + + D+++LG IL+ +T
Sbjct: 198 MAPERLLGVPASESTDIYALGVILYQMLT 226
|
Length = 932 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 39/161 (24%)
Query: 498 RSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLI 557
+ + V+++ K A E Q ++ HPNI+ +Y + + + +E
Sbjct: 31 KQIPVEQMTKDERLAAQNECQ-VLKLLSHPNIIEYYENFLEDKALMIVME---------- 79
Query: 558 YVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617
Y G+ E + ++ ++LL+E I L I+
Sbjct: 80 YAPGGTLAEYIQ--KRCNSLLDEDTI-------------------------LHFFVQILL 112
Query: 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
L H+H ++HRDLK QN+L+ K K K+ D GISK L
Sbjct: 113 ALHHVHTKLILHRDLKTQNILLDKHKMV-VKIGDFGISKIL 152
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 5e-06
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 66/240 (27%)
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
T ++V L +H +GLIHRD+KP N+L+ DK KL+D G +C+ + TG
Sbjct: 148 TAEVVLALDAIHSMGLIHRDVKPDNMLL--DKHGHLKLADFG---------TCMKMDETG 196
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ----GRQTRAIDLF 727
M V C+ G+ + +PE L G R D +
Sbjct: 197 M--------------VRCD-----------TAVGTPDYISPEVLKSQGGDGYYGRECDWW 231
Query: 728 SLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTR--------LLD 779
S+G LF + G Y +S + + D K+ + PE V++ L D
Sbjct: 232 SVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL---NFPEDVEISKHAKNLICAFLTD 288
Query: 780 PNPDL-RPKAQNVLNHPFF----WTADT----------RLSFLRDVSDRVELEDRESDSK 824
L R + + HPFF W D LS D S+ ++ED + D +
Sbjct: 289 REVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVE 348
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 5e-06
Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 60/193 (31%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRL-------VKTHHDVALK-EIQNLIASDQHPNIVRW 532
+ G+ G V Y+GR V +L V + +K EI L H NI +
Sbjct: 24 VGNGTYGQV-----YKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATY 78
Query: 533 YGV------ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
YG D ++L +E C S+ DL+ G NA ++D
Sbjct: 79 YGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG------NALKED----------- 121
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
W A + R+I+ GL+HLH +IHRD+K QNVL++++
Sbjct: 122 ------------WIA---------YICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE- 159
Query: 646 CAKLSDMGISKRL 658
KL D G+S +L
Sbjct: 160 -VKLVDFGVSAQL 171
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 5e-06
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI---------SKRLQ-GDMS 663
++ + +H++G IHRD+KP N+LI +D KL+D G+ SK Q GD
Sbjct: 109 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHI--KLTDFGLCTGFRWTHDSKYYQSGDH- 165
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG-----------YGSSGWQAP 712
+ Q++ MD + C C + L G+ + AP
Sbjct: 166 -VRQDS--MDFSNEWGDP-----ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAP 217
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPY--GESFERDANIVKDRKDLFL---VEHI 767
E LL+ T+ D +S+G IL+ + G+ P+ E ++ + L + +
Sbjct: 218 EVLLRTGYTQLCDWWSVGVILYEMLV-GQPPFLAQTPLETQMKVINWQTSLHIPPQAKLS 276
Query: 768 PEAVDLFTRLL-DPNPDL-RPKAQNVLNHPFFWTAD 801
PEA DL +L P L + A + HPFF T D
Sbjct: 277 PEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTID 312
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 76/217 (35%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ GL ++H G+IHRDLKP NV +++D ++ D G++++ +M+
Sbjct: 127 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCEL--RILDFGLARQADDEMT----------- 173
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGCI 732
GY ++ W +APE +L + +D++S+GCI
Sbjct: 174 ----------------------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 205
Query: 733 LFFCITGGK----HPYGESFERDANIV----------------------------KDRKD 760
+ + G + Y + +R +V +D K
Sbjct: 206 MAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKK 265
Query: 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+F + P A+DL ++L + D R A L HP+F
Sbjct: 266 IFRGAN-PLAIDLLEKMLVLDSDKRISASEALAHPYF 301
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 7e-06
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 56/200 (28%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IVS L +LH +++RDLK +N+++ KD K++D G+ K +S T
Sbjct: 103 EIVSALGYLHSCDVVYRDLKLENLMLDKDGHI--KITDFGLCKE---GISDGATMKT--- 154
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G+ + APE L RA+D + LG ++
Sbjct: 155 --------------FC---------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185
Query: 734 FFCITGGKHPYGESFERDANIVKDRKDLFLVEHI-------PEAVDLFTRLLDPNPDLR- 785
+ + G+ P+ + +D + +L L+E I PEA L LL +P R
Sbjct: 186 YEMMC-GRLPF---YNQDHEKL---FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 238
Query: 786 ----PKAQNVLNHPFFWTAD 801
A+ ++ H FF + +
Sbjct: 239 GGGPEDAKEIMEHRFFASIN 258
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 8e-06
Identities = 76/340 (22%), Positives = 125/340 (36%), Gaps = 98/340 (28%)
Query: 479 KEIAKGSNGTVVL-----EGNYEGRSVAVKRL---VKTHHDVALKEIQNLIASDQHPNIV 530
+++ +G G V L EG+ G VAVK L +H LK+ ++ + H NIV
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 69
Query: 531 RWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++ G+ E + + L +E ++ SGS +E L + NL
Sbjct: 70 KYKGICTEDGGNGIKLIME----------FLPSGSLKEYLPRNKNKINL----------- 108
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
Q LK I G+ +L +HRDL +NVL+ + K
Sbjct: 109 -----------------KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VK 149
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+ D G++K ++ D T +K + VF
Sbjct: 150 IGDFGLTKAIETDKEYYT-----------------VKDDLDSPVF--------------- 177
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCIT---GGKHPYGE------------SFERDAN 753
W APE L+Q + A D++S G L+ +T P + R
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237
Query: 754 IVKDRKDLFLVEHIPEAVD-LFTRLLDPNPDLRPKAQNVL 792
++++ K L + PE V L + + P R QN++
Sbjct: 238 VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 43/190 (22%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
++V L HLH+ +++RDLKP+N+L+ L D G+SK + LT N T
Sbjct: 104 ELVLALEHLHKYDIVYRDLKPENILLDATGHIA--LCDFGLSK------ANLTDNKTTN- 154
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCI 732
C G++ + APE LL + T+ +D +SLG +
Sbjct: 155 -------------TFC---------------GTTEYLAPEVLLDEKGYTKHVDFWSLGVL 186
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTR-LLDPNPDLR----PK 787
+F G Y E ++ + K F + + F + LL+ NP R
Sbjct: 187 VFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRD 246
Query: 788 AQNVLNHPFF 797
A + HPFF
Sbjct: 247 AVELKEHPFF 256
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 76/217 (35%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I+ GL ++H +IHRDLKP N+ +++D K+ D G+++ +M+
Sbjct: 129 ILRGLKYIHSADIIHRDLKPSNLAVNEDCEL--KILDFGLARHTDDEMT----------- 175
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGCI 732
GY ++ W +APE +L + +D++S+GCI
Sbjct: 176 ----------------------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 207
Query: 733 LFFCITGGK-HPYGESFERDANIVK-------------------------------DRKD 760
+ +TG P + ++ I++ + +
Sbjct: 208 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN 267
Query: 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+F+ + P AVDL ++L + D R A L H +F
Sbjct: 268 VFIGAN-PLAVDLLEKMLVLDSDKRITAAQALAHAYF 303
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 62/263 (23%), Positives = 98/263 (37%), Gaps = 87/263 (33%)
Query: 490 VLEGNYEGR-SVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546
V EG + VAVK L D L E Q ++ +HP +++ Y V
Sbjct: 22 VWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQ-IMKKLRHPKLIQLYAV----------- 69
Query: 547 ERCTCSLNDLIYVLS-----GSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKAN 601
C+L + IY+++ GS E L R LP
Sbjct: 70 ----CTLEEPIYIVTELMKYGSLLEYLQGGAG--------RALKLP-------------- 103
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
QL+ + + SG+++L IHRDL +NVL+ + + C K++D G+++ ++ D
Sbjct: 104 -----QLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG-ENNIC-KVADFGLARVIKED 156
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT 721
+Y K I W APE L R +
Sbjct: 157 ---------------IYEAREGAKFPI-------------------KWTAPEAALYNRFS 182
Query: 722 RAIDLFSLGCILFFCITGGKHPY 744
D++S G +L +T G+ PY
Sbjct: 183 IKSDVWSFGILLTEIVTYGRMPY 205
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 80/232 (34%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC-AKLSDMGISKRLQGDMSCLTQNATGMD 673
++ GL ++H ++HRDLKP N+L++ + C K+ D G+++ T + G
Sbjct: 117 LLRGLKYIHSANVLHRDLKPSNLLLNAN---CDLKICDFGLAR---------TTSEKGD- 163
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCI 732
F T + ++APE LL + T AID++S+GCI
Sbjct: 164 -------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI 198
Query: 733 LFFCITGGK--------------------HPYGES--FERDANIVKDRKDLFLVEHI--- 767
F + G K P E F R+ + + L
Sbjct: 199 -FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA 257
Query: 768 -------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSD 812
P A+DL ++L +P R + L HP+ L+ L D SD
Sbjct: 258 RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY-------LASLHDPSD 302
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 64/293 (21%), Positives = 104/293 (35%), Gaps = 72/293 (24%)
Query: 500 VAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDL 556
V VK L KT + E + ++ H N+VR G+ + + Y+ LE
Sbjct: 38 VLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILE--------- 88
Query: 557 IYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616
Y G ++ L A E K + Q + + I
Sbjct: 89 -YTDLGDLKQFLRA--------------------TKSKDEKLKPPPLSTKQKVALCTQIA 127
Query: 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQL 676
G+ HL +HRDL +N L+S K+S + +SK + +NA
Sbjct: 128 LGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDVYNSEYYKLRNA------- 178
Query: 677 VYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 736
L+ + W APE + + + D++S G +++
Sbjct: 179 --LIPLR-------------------------WLAPEAVQEDDFSTKSDVWSFGVLMWEV 211
Query: 737 ITGGKHPYGE-SFERDANIVKDRK-DLFLVEHIPEAV-DLFTRLLDPNPDLRP 786
T G+ P+ S E N ++ K +L + E P + L TR NP RP
Sbjct: 212 FTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRP 264
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 73/218 (33%)
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGM 672
+ ++ GL++ H+ +HRD+K N+L++ KL+D G+++ + S N
Sbjct: 123 KQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQI--KLADFGLARLYNSEESRPYTNKV-- 178
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG--RQTRAIDLFSLG 730
I L W P +LL G R AID++S G
Sbjct: 179 ---------ITL------------------------WYRPPELLLGEERYGPAIDVWSCG 205
Query: 731 CIL--FFC-------------------ITGG----------KHPYGESFERDANIVKDRK 759
CIL F + G K PY + + + +
Sbjct: 206 CILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLR 265
Query: 760 DLFLVEHIP-EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ F IP A+DL +L +P R A+ LN P+
Sbjct: 266 EEF--SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 2e-05
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 36/138 (26%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
QL+ + I SG++++ + +HRDL+ N+L+ ++ K++D G+++ ++ +
Sbjct: 103 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDNEYTAR 160
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
Q A +F + W APE L GR T D+
Sbjct: 161 QGA------------------------KFPI----------KWTAPEAALYGRFTIKSDV 186
Query: 727 FSLGCILFFCITGGKHPY 744
+S G +L T G+ PY
Sbjct: 187 WSFGILLTELTTKGRVPY 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 52/203 (25%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG----ISKRLQGDM 662
Q+ V ++ LS LH G+IHRD+K ++L++ D KLSD G +SK +
Sbjct: 117 QIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRK 174
Query: 663 SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR 722
S + G+ W APE + +
Sbjct: 175 SLV---------------------------------------GTPYWMAPELISRLPYGP 195
Query: 723 AIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR-----KDLFLVEHIPEAVDLFTRL 777
+D++SLG ++ + G + E + +++D K+L V P RL
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVS--PSLKGFLDRL 253
Query: 778 LDPNPDLRPKAQNVLNHPFFWTA 800
L +P R A +L HPF A
Sbjct: 254 LVRDPAQRATAAELLKHPFLAKA 276
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 81/378 (21%), Positives = 135/378 (35%), Gaps = 120/378 (31%)
Query: 480 EIAKGSNGTVVLEGN-YEGRSVAVKRLV----KTH---HDVALKEIQNLIASDQHPNIVR 531
EI GS G V N + VAVK++ +T+ D+ +KE++ + +HPN +
Sbjct: 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDI-IKEVK-FLQQLKHPNTIE 85
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ G + +L +E C S +DL+ V +E
Sbjct: 86 YKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQE------------------------- 120
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
++ +T + GL++LH +IHRD+K N+L+++ KL+D
Sbjct: 121 --------------VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLAD 164
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G + + S + G+ W A
Sbjct: 165 FGSASKSSPANSFV---------------------------------------GTPYWMA 185
Query: 712 PEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP 768
PE +L +G+ +D++SLG CI E ER + + + + HI
Sbjct: 186 PEVILAMDEGQYDGKVDVWSLGIT---CI--------ELAERKPPLF-NMNAMSALYHIA 233
Query: 769 ----------EAVDLFTRLLD----PNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRV 814
E D F +D P RP + +L H F D L D+ R
Sbjct: 234 QNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR-DRPARVLIDLIQRT 292
Query: 815 ELEDRESDSKLLRALEGI 832
+ RE D+ R ++ I
Sbjct: 293 KDAVRELDNLQYRKMKKI 310
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 3e-05
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 36/138 (26%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
L+ + + +G++++ + IHRDL+ N+L+ D C K++D G+++ ++ +
Sbjct: 103 NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-DGLVC-KIADFGLARLIEDNEYTAR 160
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
Q A +F + W APE L GR T D+
Sbjct: 161 QGA------------------------KFPI----------KWTAPEAALYGRFTIKSDV 186
Query: 727 FSLGCILFFCITGGKHPY 744
+S G +L +T G+ PY
Sbjct: 187 WSFGILLTELVTKGRVPY 204
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 70/361 (19%), Positives = 127/361 (35%), Gaps = 117/361 (32%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVK-THHDVALKEIQNLIASDQHPNIVRWY 533
+ +EI G G V L E R VA+K + + + E ++ HP +V+ Y
Sbjct: 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLY 65
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
GV +++ + L E ++ G + L A+
Sbjct: 66 GVCTERSPICLVFE----------FMEHGCLSDYLRAQR--------------------- 94
Query: 594 DIELWKANGHPSAQ-LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
G S + LL + D+ G+++L +IHRDL +N L+ +++ K+SD
Sbjct: 95 --------GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVSDF 144
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS---GW 709
G+++ + D +T G+ W
Sbjct: 145 GMTRFVLDDQ-------------------------------------YTSSTGTKFPVKW 167
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE 769
+PE + + D++S G +++ + GK PY ++R + +VE I
Sbjct: 168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY-----------ENRSNSEVVETINA 216
Query: 770 AVDLFTRLLDPNPDLRPKA-QNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRA 828
L+ P L ++ ++ H + + EDR S S LL
Sbjct: 217 GFRLY------KPRLASQSVYELMQHCW----------------KERPEDRPSFSLLLHQ 254
Query: 829 L 829
L
Sbjct: 255 L 255
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 65/292 (22%), Positives = 100/292 (34%), Gaps = 105/292 (35%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQ----------- 525
F KE+ G G V L G + + VA+K I S++
Sbjct: 8 FMKELGSGQFGVVHL-GKW-----------RAQIKVAIKAINEGAMSEEDFIEEAKVMMK 55
Query: 526 --HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
HP +V+ YGV + Q +Y+ E F E + LLN +R
Sbjct: 56 LSHPKLVQLYGVCTQQKPLYIVTE----------------FME-------NGCLLNYLRQ 92
Query: 584 RLLPVMENTKDIELWKANGHPSAQ-LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
R G S LL + +D+ G+ +L IHRDL +N L+S
Sbjct: 93 R----------------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS-- 134
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
+ K+SD G+++ + D E G F
Sbjct: 135 STGVVKVSDFGMTRYVLDD----------------------------EYTSSSGAKF--- 163
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI 754
W PE + + D++S G +++ T GK P FE+ +N
Sbjct: 164 ---PVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP----FEKKSNY 208
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 4e-05
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
+K ++ L +LH G+IHRDLKP N+LIS + KL+D G+SK
Sbjct: 107 VKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHI--KLTDFGLSK 152
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 4e-05
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 52/197 (26%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IV GL LH G+I+RDLK NV++ +D K++D G+ K +N G +
Sbjct: 104 EIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHI--KIADFGMCK----------ENVFGDN 151
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
+ C G+ + APE L + T ++D +S G +L
Sbjct: 152 RASTF----------C---------------GTPDYIAPEILQGLKYTFSVDWWSFGVLL 186
Query: 734 FFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP-----EAVDLFTRLLDPNPDLRPKA 788
+ + G +G+ + D R D H P E+ D+ +L + +P R
Sbjct: 187 YEMLIGQSPFHGD--DEDELFESIRVD---TPHYPRWITKESKDILEKLFERDPTRRLGV 241
Query: 789 Q-NVLNHPFF----WTA 800
N+ HPFF WTA
Sbjct: 242 VGNIRGHPFFKTINWTA 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 50/197 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
++V + +H++G +HRD+KP NVL+ DK+ +L+D G SCL A G
Sbjct: 110 EMVLAIDSVHQLGYVHRDIKPDNVLL--DKNGHIRLADFG---------SCLRLLADGTV 158
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-----QGRQTRAIDLFS 728
V + G+ + +PE L +GR D +S
Sbjct: 159 QSNVAV-------------------------GTPDYISPEILQAMEDGKGRYGPECDWWS 193
Query: 729 LGCILFFCITGGKHPYGESFERDANIVKDRKDLF----LVEHIPE-AVDLFTRLLDPNPD 783
LG ++ + G Y ES + + K+ F V + E A DL RL+ P+
Sbjct: 194 LGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PE 252
Query: 784 LR---PKAQNVLNHPFF 797
R Q+ +HPFF
Sbjct: 253 TRLGRNGLQDFKDHPFF 269
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 51/183 (27%)
Query: 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRL-------VKTHHDVALKEIQNLIASDQHPNIV 530
+EI GS G V + VA+K++ + D+ +KE++ + +HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVR-FLQQLRHPNTI 78
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ G + +L +E C S +D++ V L EV I
Sbjct: 79 EYKGCYLREHTAWLVMEYCLGSASDILEVHKKP--------------LQEVEIA------ 118
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ + GL++LH IHRD+K N+L+++ + KL+
Sbjct: 119 -------------------AICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT--VKLA 157
Query: 651 DMG 653
D G
Sbjct: 158 DFG 160
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 53/204 (25%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
+++++ +I G+++L+ +HRDL +N +++ D F K+ D G+++
Sbjct: 120 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTVKIGDFGMTRD--------- 168
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG-----WQAPEQLLQGRQT 721
+Y K G G W APE L G T
Sbjct: 169 ----------IYETDYYRK-------------------GGKGLLPVRWMAPESLKDGVFT 199
Query: 722 RAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-DLFTRLLD 779
+ D++S G +L+ + + PY G S E+ V D L ++ PE V DL
Sbjct: 200 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 259
Query: 780 PNPDLRPKAQNVLN------HPFF 797
NP +RP ++N HP F
Sbjct: 260 FNPKMRPTFLEIVNLLKDDLHPSF 283
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 46.3 bits (109), Expect = 4e-05
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 46/198 (23%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
Q+ V R+ + L LH +IHRD+K N+L+ D S KL+D G ++ + S
Sbjct: 115 GQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQS-- 170
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAID 725
+ +T + G+ W APE + + +D
Sbjct: 171 -KRSTMV--------------------------------GTPYWMAPEVVTRKAYGPKVD 197
Query: 726 LFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-----DLFTRLLD 779
++SLG I+ + G+ PY E+ R ++ L PE + D R L+
Sbjct: 198 IWSLG-IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN--PERLSAVFRDFLNRCLE 254
Query: 780 PNPDLRPKAQNVLNHPFF 797
+ D R A+ +L HPF
Sbjct: 255 MDVDRRGSAKELLQHPFL 272
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 4e-05
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 43/181 (23%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVE 536
E+ G+ G V N E +A +++ T + L++ +++AS HPNIV+
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71
Query: 537 SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596
++ +++ +E C D + +E
Sbjct: 72 YYENNLWILIEFCAGGAVDAVM------------------------------------LE 95
Query: 597 LWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
L + P ++ V + + L++LHE +IHRDLK N+L + D KL+D G+S
Sbjct: 96 LERPLTEPQIRV--VCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDI--KLADFGVSA 151
Query: 657 R 657
+
Sbjct: 152 K 152
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 5e-05
Identities = 66/310 (21%), Positives = 120/310 (38%), Gaps = 62/310 (20%)
Query: 487 GTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVESDQDFVY 543
G + L G + VA+K L ++ E Q +L+A HPNIV GV + + V
Sbjct: 24 GHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83
Query: 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGH 603
+ E Y+ G E L + S++ + +D + + H
Sbjct: 84 MLFE----------YLNQGDLHEFLIMRSPHSDV----------GCSSDEDGTVKSSLDH 123
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
L + I +G+ +L +H+DL +N+LI + K+SD+G+S+ +
Sbjct: 124 --GDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--EQLHVKISDLGLSREIYSADY 179
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
Q + + ++ W PE ++ G+ +
Sbjct: 180 YRVQPKSLLPIR---------------------------------WMPPEAIMYGKFSSD 206
Query: 724 IDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPN 781
D++S G +L+ + G P YG S + +V+ R+ L E P + L T
Sbjct: 207 SDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEG 266
Query: 782 PDLRPKAQNV 791
P RP+ +++
Sbjct: 267 PSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 67/326 (20%), Positives = 129/326 (39%), Gaps = 84/326 (25%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALKEIQNLIASDQHPNIVRW 532
K+I +GS G +L + E G+ +K ++ + + KE+ ++++ +HPNIV++
Sbjct: 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVA-VLSNMKHPNIVQY 64
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ +Y+ ++ C G +++NA+
Sbjct: 65 QESFEENGNLYIVMDYCE----------GGDLYKKINAQ--------------------- 93
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ P Q+L I L H+H+ ++HRD+K QN+ ++KD + KL D
Sbjct: 94 ------RGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTI--KLGDF 145
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GI++ L N+T ++L C+ G+ + +P
Sbjct: 146 GIARVL---------NST-VELART-------------CI------------GTPYYLSP 170
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPY--GESFERDANIVKDRKDLFLVEHIPEA 770
E D+++LGC+L+ T KH + G I++ + +
Sbjct: 171 EICENRPYNNKSDIWALGCVLYEMCT-LKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDL 229
Query: 771 VDLFTRLLDPNPDLRPKAQNVLNHPF 796
+L ++L NP RP ++L F
Sbjct: 230 RNLVSQLFKRNPRDRPSVNSILEKNF 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDM 652
D L KA P L K++ ++ GL++L E ++HRD+KP N+L++ KL D
Sbjct: 87 DQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEI--KLCDF 144
Query: 653 GISKRLQGDMS 663
G+S +L M+
Sbjct: 145 GVSGQLIDSMA 155
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 7e-05
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 59/191 (30%)
Query: 479 KEIAKGSNGTVVLEGNY-EGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRW 532
K I G+ G V + G++VA+K+L + TH A +E+ L+ H NI+
Sbjct: 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELV-LMKLVNHKNIIGL 80
Query: 533 YGV----ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
V +S ++F VYL +E +L +I + L+ R+ L
Sbjct: 81 LNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-----------------LDHERMSYL 123
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
L+ Q+L G+ HLH G+IHRDLKP N+++ KS C
Sbjct: 124 ----------LY--------QML-------CGIKHLHSAGIIHRDLKPSNIVV---KSDC 155
Query: 647 A-KLSDMGISK 656
K+ D G+++
Sbjct: 156 TLKILDFGLAR 166
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 7e-05
Identities = 64/316 (20%), Positives = 110/316 (34%), Gaps = 91/316 (28%)
Query: 497 GRSVAVKRLVKTHHDVALKEIQNLIASDQ------HPNIVRWYGVESDQDFVYLSLERCT 550
G A+K L K + +K++Q++ HP IV D++ VY LE
Sbjct: 43 GEYYAIKCL-KKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLE--- 98
Query: 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610
+V+ G L +R KA P+
Sbjct: 99 -------FVVGGE-------------LFTHLR----------------KAGRFPNDVAKF 122
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
++V +LH +I+RDLKP+N+L+ K++D G +K++ L
Sbjct: 123 YHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHV--KVTDFGFAKKVPDRTFTL----- 175
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLG 730
C G+ + APE + +A+D +++G
Sbjct: 176 ------------------C---------------GTPEYLAPEVIQSKGHGKAVDWWTMG 202
Query: 731 CILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP-----DLR 785
+L+ I G + ++ R + + F A DL LL + L+
Sbjct: 203 VLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLK 262
Query: 786 PKAQNVLNHPFFWTAD 801
+V NHP+F A+
Sbjct: 263 GGVADVKNHPYFHGAN 278
|
Length = 329 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 7e-05
Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 81/261 (31%)
Query: 479 KEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRW 532
K I G+ G V G +VAVK+L + TH A +E+ L+ H NI+
Sbjct: 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKNIISL 85
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + Q SLE D+ V+ + D+NL + + L
Sbjct: 86 LNVFTPQK----SLEE----FQDVYLVM----------ELMDANLCQVIHMEL------- 120
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
D E ++ + ++ G+ HLH G+IHRDLKP N+++ D + K+ D
Sbjct: 121 -DHE----------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL--KILDF 167
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G L + A + Y+V + ++AP
Sbjct: 168 G-----------LARTACTNFMMTPYVV-------------------------TRYYRAP 191
Query: 713 EQLLQGRQTRAIDLFSLGCIL 733
E +L +D++S+GCI+
Sbjct: 192 EVILGMGYKENVDIWSVGCIM 212
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 7e-05
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMG 653
+ R I+ L LH G++HRD+KPQN++ S SF K+ D+G
Sbjct: 259 TIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSF--KIIDLG 301
|
Length = 566 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 7e-05
Identities = 60/242 (24%), Positives = 87/242 (35%), Gaps = 77/242 (31%)
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
T ++V L +H +G IHRD+KP N+L+ DKS KL+D G +C+ N G
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDNMLL--DKSGHLKLADFG---------TCMKMNKEG 196
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ----GRQTRAIDLF 727
M V C+ G+ + +PE L G R D +
Sbjct: 197 M--------------VRCD-----------TAVGTPDYISPEVLKSQGGDGYYGRECDWW 231
Query: 728 SLGCILFFCITGGKHPYGES----------------FERDANIVKDRKDLFLVEHIPEAV 771
S+G L+ + G Y +S F D +I K+ K+L V
Sbjct: 232 SVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV 291
Query: 772 DLFTRLLDPNPDLRPKAQNVLNHPFF----WT----ADTRLSFLRDVS---DRVELEDRE 820
L R + + H FF W DT + D+S D +D E
Sbjct: 292 RLG----------RNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDIE 341
Query: 821 SD 822
D
Sbjct: 342 ED 343
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 7e-05
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ-GDMSCLTQNATGM 672
++ + +H++G IHRD+KP N+LI D KL+D G+ + S Q + +
Sbjct: 109 ELTLAIESVHKMGFIHRDIKPDNILIDLDGHI--KLTDFGLCTGFRWTHNSKYYQKGSHI 166
Query: 673 DLQLVYLVSILLKLVICECVFQFGVL-----------FFTVGYGSSGWQAPEQLLQGRQT 721
+ + + C C + L G+ + APE LL+ T
Sbjct: 167 RQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT 226
Query: 722 RAIDLFSLGCILFFCITGGKHPY--GESFERDANIVKDRKDLFLVEHI---PEAVDLFTR 776
+ D +S+G ILF + G+ P+ E ++ L + + PEAVDL T+
Sbjct: 227 QLCDWWSVGVILFEMLV-GQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITK 285
Query: 777 LLDPNPDL--RPKAQNVLNHPFFWTAD 801
L + R A ++ HPFF D
Sbjct: 286 LCCSAEERLGRNGADDIKAHPFFSEVD 312
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 8e-05
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 47/187 (25%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIAS-DQHPNIVRWYGV- 535
I KG+ G V N + S+A +++ DV +EI+ N++ S HPN+V++YG+
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEYNILQSLPNHPNVVKFYGMF 88
Query: 536 -ESDQ---DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
++D+ ++L LE C GS E + L+E I +
Sbjct: 89 YKADKLVGGQLWLVLELCN----------GGSVTELVKGLLICGQRLDEAMISYI----- 133
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
L+ A + GL HLH +IHRD+K N+L++ + KL D
Sbjct: 134 -----LYGA---------------LLGLQHLHNNRIIHRDVKGNNILLTTEGG--VKLVD 171
Query: 652 MGISKRL 658
G+S +L
Sbjct: 172 FGVSAQL 178
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 8e-05
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
++V + +H++G +HRD+KP+NVLI D++ KL+D G + RL +
Sbjct: 110 ELVLAIHSVHQMGYVHRDIKPENVLI--DRTGHIKLADFGSAARLTAN 155
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 8e-05
Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 46/197 (23%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT 666
Q+ V ++ LS+LH G+IHRD+K ++L++ D KLSD G ++ ++
Sbjct: 119 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI--KLSDFGFCAQVSKEVP--- 173
Query: 667 QNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDL 726
+ LV G+ W APE + + +D+
Sbjct: 174 --------KRKSLV------------------------GTPYWMAPEVISRLPYGTEVDI 201
Query: 727 FSLGCILFFCITGGKHPYGESFERDANIVKDR-----KDLFLVEHIPEA-VDLFTRLLDP 780
+SLG ++ I G + E + ++D KD V + +DL +L
Sbjct: 202 WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDL---MLVR 258
Query: 781 NPDLRPKAQNVLNHPFF 797
P R AQ +L HPF
Sbjct: 259 EPSQRATAQELLQHPFL 275
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 8e-05
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 40/131 (30%)
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
+ R+++ L ++H++G+IHRD+K N+L++ + KL D G++ L + S + +T
Sbjct: 106 IIREVLVALKYIHKVGVIHRDIKAANILVTNTGN--VKLCDFGVAALLNQNSS---KRST 160
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFS 728
F G+ W APE + +G+ T+A D++S
Sbjct: 161 -----------------------------FV---GTPYWMAPEVITEGKYYDTKA-DIWS 187
Query: 729 LGCILFFCITG 739
LG ++ TG
Sbjct: 188 LGITIYEMATG 198
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 40/190 (21%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR-LQGDMSCLTQNATGM 672
+I+ GL LH G+++RDLK N+L+ D K++D G+ K + GD T
Sbjct: 104 EIICGLQFLHSKGIVYRDLKLDNILLDTDGHI--KIADFGMCKENMLGDAKTCT------ 155
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 732
C G+ + APE LL + ++D +S G +
Sbjct: 156 ---------------FC---------------GTPDYIAPEILLGQKYNTSVDWWSFGVL 185
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ-NV 791
L+ + G +G E ++ + EA D+ +L P+ R + ++
Sbjct: 186 LYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDI 245
Query: 792 LNHPFFWTAD 801
HPFF D
Sbjct: 246 RQHPFFREID 255
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 43/190 (22%)
Query: 614 DIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGM 672
+IVS L +LH E +++RDLK +N+++ KD K++D G+ K D + +
Sbjct: 103 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI--KITDFGLCKEGIKDGATMK------ 154
Query: 673 DLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCI 732
C G+ + APE L RA+D + LG +
Sbjct: 155 --------------TFC---------------GTPEYLAPEVLEDNDYGRAVDWWGLGVV 185
Query: 733 LFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR-----PK 787
++ + G Y + E+ ++ + F PEA L + LL +P R
Sbjct: 186 MYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDD 245
Query: 788 AQNVLNHPFF 797
A+ ++ H FF
Sbjct: 246 AKEIMQHKFF 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-04
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 38/183 (20%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ + H+H +IHRD+K N+L+ + KL D G SK M T
Sbjct: 152 VLLAVHHVHSKHMIHRDIKSANILLCSNG--LVKLGDFGFSK-----MYAAT-------- 196
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
VS + C G+ + APE + ++ D+FSLG +L+
Sbjct: 197 -----VSDDVGRTFC---------------GTPYYVAPEIWRRKPYSKKADMFSLGVLLY 236
Query: 735 FCITGGKHPY-GESFERDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
+T K P+ GE+ E + + R D PE ++ T LL +P RP + +L
Sbjct: 237 ELLTL-KRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLL 295
Query: 793 NHP 795
N P
Sbjct: 296 NMP 298
|
Length = 496 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 39/185 (21%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEI---QNLIASDQHPNIVRWYGVE 536
E+ +G+ ++ G+ R VAVK L K D KE +L+++ HPNIV+ GV
Sbjct: 10 EVYEGTATDILGPGSGPIR-VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC 68
Query: 537 SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596
+ Y+ +E DL+ L + E+ LL + E
Sbjct: 69 LLNEPQYIIMELMEGG--DLLSYLRDARVERFGPP-------------LLTLKE------ 107
Query: 597 LWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC---AKLSDMG 653
LL + D+ G +L ++ IHRDL +N L+S+ K+ D G
Sbjct: 108 -----------LLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156
Query: 654 ISKRL 658
+++ +
Sbjct: 157 LARDI 161
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGD 661
P+ L+K DI SG+ +L IHRDL +N +++++ + C ++D G+SK++ GD
Sbjct: 110 PTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVC--VADFGLSKKIYNGD 166
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 54/269 (20%), Positives = 99/269 (36%), Gaps = 75/269 (27%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIVRWYGV 535
K++ G G V + + VAVK + V A N++ + QH +V+ + V
Sbjct: 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 69
Query: 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI 595
+ + +Y+ E ++ GS + L + E
Sbjct: 70 VTKEP-IYIITE----------FMAKGSLLDFLKSDE----------------------- 95
Query: 596 ELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655
+ P +L+ + I G++ + + IHRDL+ N+L+S S K++D G++
Sbjct: 96 ----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKIADFGLA 149
Query: 656 KRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQL 715
+ ++ + E + G F W APE +
Sbjct: 150 RVIEDN----------------------------EYTAREGAKF------PIKWTAPEAI 175
Query: 716 LQGRQTRAIDLFSLGCILFFCITGGKHPY 744
G T D++S G +L +T G+ PY
Sbjct: 176 NFGSFTIKSDVWSFGILLMEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 46/198 (23%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
AQ+ V R+ + L LH +IHRD+K NVL+ D S KL+D G ++ + S
Sbjct: 115 AQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS--VKLTDFGFCAQITPEQS-- 170
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAID 725
+ +T + G+ W APE + + +D
Sbjct: 171 -KRSTMV--------------------------------GTPYWMAPEVVTRKAYGPKVD 197
Query: 726 LFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-----DLFTRLLD 779
++SLG I+ + G+ PY E+ R ++ L PE + D R L+
Sbjct: 198 IWSLG-IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN--PEKLSPIFRDFLNRCLE 254
Query: 780 PNPDLRPKAQNVLNHPFF 797
+ + R A+ +L HPF
Sbjct: 255 MDVEKRGSAKELLQHPFL 272
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 1e-04
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
V R +++GL LH IG++HRD+KP+N+L++ D K+ D G
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ--VKIIDFG 354
|
Length = 507 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 72/214 (33%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I+ GL ++H G++HRDLKP N+LI+++ K+ D G++ R+Q D
Sbjct: 117 ILRGLKYVHSAGVVHRDLKPSNILINENCDL--KICDFGLA-RIQ-------------DP 160
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCIL 733
Q+ VS + ++APE +L ++ +D++S GCI
Sbjct: 161 QMTGYVS------------------------TRYYRAPEIMLTWQKYDVEVDIWSAGCIF 196
Query: 734 FFCITG-----GKHPYGE-------------------SFERDANIVKD---RKDLFLVEH 766
+ G GK + E V+ R+ + E
Sbjct: 197 AEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEK 256
Query: 767 I----PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
P A+DL ++L +P R A L HP+
Sbjct: 257 FKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 40/154 (25%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGDMSCL 665
QL+ + I G+S+LH+ G+IH+D+ +N +I D+ K++D +S+ L D CL
Sbjct: 118 QLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI--DEELQVKITDNALSRDLFPMDYHCL 175
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAID 725
N W A E L+ + A D
Sbjct: 176 GDNE----------------------------------NRPVKWMALESLVNKEYSSASD 201
Query: 726 LFSLGCILFFCITGGKHPYGE--SFERDANIVKD 757
++S G +L+ +T G+ PY E FE A +KD
Sbjct: 202 VWSFGVLLWELMTLGQTPYVEIDPFEM-AAYLKD 234
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 66/213 (30%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ GLS+ H+ ++HRDLKPQN+LI++ KL+D G+++ S T+ + +
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLINEKGEL--KLADFGLARA----KSVPTKTYSNEVV 165
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
L Y +L GS+ + P ID++ +GCIL+
Sbjct: 166 TLWYRPPDVL-------------------LGSTEYSTP-----------IDMWGVGCILY 195
Query: 735 FCITGGKHPYGESFERDANIV-------------------KDRKDLF-------LVEHIP 768
TG G + + + +++ + R LF L+ H P
Sbjct: 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAP 255
Query: 769 ----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ +DL + LL R A+ L H +F
Sbjct: 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 46/201 (22%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
Q+ V R+ + L LH +IHRD+K N+L+ D S KL+D G ++ + S
Sbjct: 115 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQS-- 170
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAID 725
+ M G+ W APE + + +D
Sbjct: 171 --KRSTM-------------------------------VGTPYWMAPEVVTRKAYGPKVD 197
Query: 726 LFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-----DLFTRLLD 779
++SLG I+ + G+ PY E+ R ++ L PE + D R L+
Sbjct: 198 IWSLG-IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQN--PEKLSAIFRDFLNRCLE 254
Query: 780 PNPDLRPKAQNVLNHPFFWTA 800
+ + R A+ +L HPF A
Sbjct: 255 MDVEKRGSAKELLQHPFLKIA 275
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 72/322 (22%), Positives = 117/322 (36%), Gaps = 86/322 (26%)
Query: 490 VLEGNYEGR---SVAVKRLVKTHHDVALKEIQN-------LIASDQHPNIVRWYGVESDQ 539
V EG Y GR +V ++ VKT + ++ ++ +++ H NIVR GV ++
Sbjct: 22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81
Query: 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599
++ LE +++G + K + L E R R
Sbjct: 82 LPRFILLE-----------LMAGG-----DLK----SFLRENRPRP-------------- 107
Query: 600 ANGHPSA----QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGI 654
PS+ LL RD+ G +L E IHRD+ +N L++ K AK++D G+
Sbjct: 108 --ERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGM 165
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ + S + M L I W PE
Sbjct: 166 ARDIYRA-SYYRKGGRAM-------------LPI-------------------KWMPPEA 192
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-D 772
L G T D++S G +L+ + G PY G + + V L + P V
Sbjct: 193 FLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYR 252
Query: 773 LFTRLLDPNPDLRPKAQNVLNH 794
+ T P+ RP +L
Sbjct: 253 IMTDCWQHTPEDRPNFATILER 274
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 72/283 (25%)
Query: 475 VVFNKEIAKGSNGTVVL--------EGNYEGRSVAVKRLVK--THHDVA--LKEIQNLIA 522
+ K + +G G VV+ + E +VAVK L T D++ + E++ +
Sbjct: 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM 76
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+H NI+ G + +Y+ +E Y G+ E L R
Sbjct: 77 IGKHKNIINLLGACTQDGPLYVIVE----------YASKGNLREYL-------------R 113
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
R P ME + DI L+ T + G+ +L IHRDL +NVL++++
Sbjct: 114 ARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173
Query: 643 KSFCAKLSDMGISKRLQG-DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
K++D G+++ + D T N
Sbjct: 174 NVM--KIADFGLARDVNNIDYYKKTTN--------------------------------- 198
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
G W APE L T D++S G +++ T G PY
Sbjct: 199 -GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 2e-04
Identities = 71/332 (21%), Positives = 119/332 (35%), Gaps = 89/332 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-------VAVKRLVKTHH----DVALKEIQNLIAS 523
+ F K + G+ G VV E G S VAVK L T H + + E++ +
Sbjct: 37 LSFGKTLGAGAFGKVV-EATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL 95
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
H NIV G + + + E C Y +LLN +R
Sbjct: 96 GNHENIVNLLGACTIGGPILVITEYCC-------Y----------------GDLLNFLR- 131
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
R +D LL + + G++ L IHRDL +NVL++ K
Sbjct: 132 RKRESFLTLED-------------LLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK 178
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
K+ D G+++ + D + + + + ++
Sbjct: 179 --IVKICDFGLARDIMNDSNYVVKGNARLPVK---------------------------- 208
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL 763
W APE + T D++S G +L+ + G +PY D+ K K+ +
Sbjct: 209 -----WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY-PGMPVDSKFYKLIKEGYR 262
Query: 764 V---EHIPEAV-DLFTRLLDPNPDLRPKAQNV 791
+ EH P + D+ D +P RP + +
Sbjct: 263 MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQI 294
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 66/273 (24%), Positives = 109/273 (39%), Gaps = 91/273 (33%)
Query: 479 KEIAKGSNGTV------VLEGNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHP 527
K I G+ G V +LE R+VA+K+L + TH A +E+ L+ H
Sbjct: 30 KPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHK 83
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NI+ V + Q SLE D+ V+ + D+NL +++ L
Sbjct: 84 NIIGLLNVFTPQK----SLEE----FQDVYIVM----------ELMDANLCQVIQMEL-- 123
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
D E ++ + ++ G+ HLH G+IHRDLKP N+++ D +
Sbjct: 124 ------DHE----------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL-- 165
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+ D G++ R G +T V ++
Sbjct: 166 KILDFGLA-RTAGTSFMMTP----------------------YVVTRY------------ 190
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 740
++APE +L +D++S+GCI+ I GG
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 73/374 (19%), Positives = 121/374 (32%), Gaps = 136/374 (36%)
Query: 480 EIAKG-SNGTVVLEGNYE--GRSVAVKRL---VKTHHDVALKEIQNLI---ASDQHPNIV 530
I K + +V ++ VAVK++ + D LK +Q I QHPNI+
Sbjct: 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKED--LKLLQQEIITSRQLQHPNIL 62
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLS-----GSFEEQLNAKEQDSNLLNEVRIRL 585
+ F+ + +YV+S GS E+ L K L E+ I
Sbjct: 63 PYV-----TSFIV----------DSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAF 105
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ +D+++ L ++H G IHR +K ++L+S D
Sbjct: 106 -------------------------ILKDVLNALDYIHSKGFIHRSVKASHILLSGDGK- 139
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
LS + Y VS++ V F
Sbjct: 140 -VVLSGLR------------------------YSVSMIKHGKRQRVVHDFPKSSVKNLP- 173
Query: 706 SSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCIT-----GGKHPYGE------------ 746
W +PE L Q Q D++S+G IT G P+ +
Sbjct: 174 ---WLSPEVLQQNLQGYNEKSDIYSVG------ITACELANGHVPFKDMPATQMLLEKVR 224
Query: 747 ----------SFERDANIVKDRKDLFLVEHIPEAVD-LFTRLLDP------------NPD 783
++ + + + + ++VD +TR +P+
Sbjct: 225 GTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPE 284
Query: 784 LRPKAQNVLNHPFF 797
RP A +LNH FF
Sbjct: 285 SRPSASQLLNHSFF 298
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 2e-04
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 41/146 (28%)
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD--KSFCAK 648
N K ++L P + + I+ G+ +LH ++HRDLKP N+L+ + + K
Sbjct: 99 NKKPVQL------PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK 152
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++DMG ++ + L DL V V F+
Sbjct: 153 IADMGFARLFNSPLKPLA------DLDPVV------------------VTFW-------- 180
Query: 709 WQAPEQLLQGRQ-TRAIDLFSLGCIL 733
++APE LL R T+AID++++GCI
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIF 206
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 70/282 (24%)
Query: 475 VVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVK--THHDVA--LKEIQNLIA 522
+V K + +G G VV Y + +VAVK L T D+A + E++ +
Sbjct: 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKL 73
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+H NI+ GV + + +Y+ +E Y G+ E L R
Sbjct: 74 IGKHKNIINLLGVCTQEGPLYVIVE----------YAAKGNLREFL-------------R 110
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
R P + T DI L+ + G+ +L IHRDL +NVL+++D
Sbjct: 111 ARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED 170
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
K++D G+++ + D+ + + G +L +
Sbjct: 171 NVM--KIADFGLARGVH-DIDYYKKTSNG-------------RLPV-------------- 200
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L T D++S G +++ T G PY
Sbjct: 201 -----KWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 2e-04
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 35/133 (26%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD--KSFCAKLSDMGISKRLQGD 661
P + + + I+ G+ +LH ++HRDLKP N+L+ + + K++DMG ++
Sbjct: 106 PRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ- 720
+ L DL V V F+ ++APE LL R
Sbjct: 166 LKPLA------DLDPVV------------------VTFW--------YRAPELLLGARHY 193
Query: 721 TRAIDLFSLGCIL 733
T+AID++++GCI
Sbjct: 194 TKAIDIWAIGCIF 206
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
AQ+ V R ++S + ++H G+IHRD+K +NVL++ + C L D G + +G S
Sbjct: 260 AQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDIC--LGDFGAACFARGSWS 315
|
Length = 461 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYGV 535
+ + G+ G V N +A +++K IQ ++ +H NIV ++G
Sbjct: 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGS 74
Query: 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
++ +++ +E C SL D IY ++G E
Sbjct: 75 YLSREKLWICMEYCGGGSLQD-IYHVTGPLSE---------------------------- 105
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
Q+ V R+ + GL++LH G +HRD+K N+L++ + KL+D G+
Sbjct: 106 -----------LQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD--VKLADFGV 152
Query: 655 SKRLQGDMS 663
+ ++ ++
Sbjct: 153 AAKITATIA 161
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 68/339 (20%), Positives = 117/339 (34%), Gaps = 107/339 (31%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD--VALKEIQNLIASDQH------ 526
+ +E+ +GS G V YEG K +VK + VA+K + + +
Sbjct: 8 ITLIRELGQGSFGMV-----YEG---LAKGVVKGEPETRVAIKTVNENASMRERIEFLNE 59
Query: 527 ---------PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL 577
++VR GV S + +E + G + L ++ +
Sbjct: 60 ASVMKEFNCHHVVRLLGVVSTGQPTLVVME----------LMAKGDLKSYLRSRRPE--- 106
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQ-LLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636
L P+ Q +++ +I G+++L +HRDL +N
Sbjct: 107 --AENNPGLGP---------------PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARN 149
Query: 637 VLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696
++++D K+ D G+++ +
Sbjct: 150 CMVAED--LTVKIGDFGMTRDI-------------------------------------- 169
Query: 697 VLFFTVGYGSSG-------WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESF 748
+ T Y G W APE L G T D++S G +L+ T + PY G S
Sbjct: 170 --YETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227
Query: 749 ERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRP 786
E V D L L E+ P+ + +L NP +RP
Sbjct: 228 EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 51/188 (27%)
Query: 479 KEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVALKEI---QNLIASDQHPNIV 530
KE+ G+ G+VV +G Y +S VAVK L + H KE +++A HP IV
Sbjct: 1 KELGHGNFGSVV-KGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIV 59
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R GV C L+ V+ + L + R +PV
Sbjct: 60 RLIGV---------------CKGEPLMLVMELAPLGPLLKYLKKR--------REIPV-- 94
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
D++ +V G+++L +HRDL +NVL+ AK+S
Sbjct: 95 --SDLKEL---------AHQVAM----GMAYLESKHFVHRDLAARNVLLVNRHQ--AKIS 137
Query: 651 DMGISKRL 658
D G+S+ L
Sbjct: 138 DFGMSRAL 145
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 72/228 (31%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
++ GL++ H ++HRDLKPQN+LI++ KL+D G+++
Sbjct: 113 LLRGLNYCHRRKVLHRDLKPQNLLINERGEL--KLADFGLARA----------------- 153
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCI 732
SI K E V + W P +L G + ID++ +GCI
Sbjct: 154 -----KSIPTKTYSNEVV--------------TLWYRPPDILLGSTDYSTQIDMWGVGCI 194
Query: 733 LFFCITGGKHPYGESFERDANIV---------------------------KDRKDLFLVE 765
+ TG G + E + + K R D L
Sbjct: 195 FYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC-LHN 253
Query: 766 HIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRD 809
H P + +L ++LL R A+ + HP+F R+ L D
Sbjct: 254 HAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHKLPD 301
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 41/168 (24%)
Query: 597 LWKANGHPSA-QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655
L K G A QL+ + + SG+ +L E+G +H+ L VL++ D K+S
Sbjct: 97 LRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFR-- 152
Query: 656 KRLQGD-MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
RLQ D + +G L W APE
Sbjct: 153 -RLQEDKSEAIYTTMSGKSPVL--------------------------------WAAPEA 179
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF 762
+ + A D++S G +++ ++ G+ PY + +D ++K +D F
Sbjct: 180 IQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAVEDGF 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 47/188 (25%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALK----EIQNLIASDQHPNIVRWYGV 535
E+ G+ G V + E A ++++ + L+ EI ++++ +HPNIV Y
Sbjct: 12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEI-DILSECKHPNIVGLYEA 70
Query: 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
++ +++ +E C +L+ ++ L E
Sbjct: 71 YFYENKLWILIEFCDGGALDSIMLELERGLTE---------------------------- 102
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
Q+ V R ++ L+ LH +IHRDLK N+L++ D KL+D G+
Sbjct: 103 -----------PQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD--VKLADFGV 149
Query: 655 SKRLQGDM 662
S + + +
Sbjct: 150 SAKNKSTL 157
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 73/334 (21%), Positives = 128/334 (38%), Gaps = 75/334 (22%)
Query: 475 VVFNKEIAKGSNGTV------VLEGNYEGRSVAVKRLVKTHHDVALK-EIQN---LIASD 524
V F +E+ +G+ G V SVA+K L K + + ++ E + L++
Sbjct: 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL-KENAEPKVQQEFRQEAELMSDL 65
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDL-IYVLSGSFEEQLNAKEQDSNLLNEVRI 583
QHPNIV GV + + + E + DL +++ S + A+ D
Sbjct: 66 QHPNIVCLLGVCTKEQPTCMLFE--YLAHGDLHEFLVRNSPHSDVGAESGD--------- 114
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
E K L + L + I +G+ +L +HRDL +N L+ +
Sbjct: 115 ------ETVKSS-LD------CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161
Query: 644 SFCAKLSDMGISKRL-QGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
+ K+SD G+S+ + D + + LL +
Sbjct: 162 T--VKISDFGLSRDIYSADYYRVQSKS-------------LLPV---------------- 190
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDL 761
W PE +L G+ T D++S G +L+ + G PY G S + +++ R+ L
Sbjct: 191 -----RWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL 245
Query: 762 FLVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNH 794
E P V L + P RP+ +++
Sbjct: 246 PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 3e-04
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 45/182 (24%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALK----EIQNLIASDQHPNIVRWYGV 535
E+ G+ G V N E ++A ++++T + L+ EI+ ++A+ HP IV+ G
Sbjct: 19 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIE-ILATCNHPYIVKLLGA 77
Query: 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI 595
+++ +E C D I + E D L E +I++
Sbjct: 78 FYWDGKLWIMIEFCPGGAVDAIML------------ELDRGL-TEPQIQV---------- 114
Query: 596 ELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655
+ R ++ L +LH + +IHRDLK NVL++ D KL+D G+S
Sbjct: 115 ---------------ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDI--KLADFGVS 157
Query: 656 KR 657
+
Sbjct: 158 AK 159
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 46/201 (22%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665
Q+ V R+ + L LH +IHRD+K N+L+ D S KL+D G ++ + S
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR 173
Query: 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAID 725
+ G+ W APE + + +D
Sbjct: 174 STMV-----------------------------------GTPYWMAPEVVTRKAYGPKVD 198
Query: 726 LFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-----DLFTRLLD 779
++SLG I+ + G+ PY E+ R ++ L PE + D R LD
Sbjct: 199 IWSLG-IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN--PEKLSAIFRDFLNRCLD 255
Query: 780 PNPDLRPKAQNVLNHPFFWTA 800
+ + R A+ +L H F A
Sbjct: 256 MDVEKRGSAKELLQHQFLKIA 276
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 496 EGRS--VAVKRL----VKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+GR VAVK L K + LKE++ +++ + PNI+R GV D+D + + E
Sbjct: 43 KGRPLLVAVKILRPDANKNARNDFLKEVK-ILSRLKDPNIIRLLGVCVDEDPLCMITEYM 101
Query: 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
DL LS L+ KE++ N L + + S LL
Sbjct: 102 ENG--DLNQFLS---SHHLDDKEENGNDAVPPAHCLPAI-------------SYSS--LL 141
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
V I SG+ +L + +HRDL +N L+ ++ K++D G+S+ L
Sbjct: 142 HVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNL 188
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 42/189 (22%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+IVS L +LH +++RDLK +N+++ KD K++D G+ K D + +
Sbjct: 103 EIVSALDYLHSGKIVYRDLKLENLMLDKDGHI--KITDFGLCKEGITDAATMK------- 153
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G+ + APE L RA+D + LG ++
Sbjct: 154 -------------TFC---------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185
Query: 734 FFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR-----PKA 788
+ + G Y + E+ ++ F +A L + LL +P+ R A
Sbjct: 186 YEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDA 245
Query: 789 QNVLNHPFF 797
+ ++ H FF
Sbjct: 246 KEIMRHSFF 254
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 39/186 (20%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGDM 662
P L++ DI SG+ +L IHRDL +N +++++ + C ++D G+SK++ GD
Sbjct: 111 PLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVC--VADFGLSKKIYSGDY 168
Query: 663 SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR 722
Y KL + W A E L T
Sbjct: 169 ---------------YRQGCASKLPV-------------------KWLALESLADNVYTT 194
Query: 723 AIDLFSLGCILFFCITGGKHPYG--ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDP 780
D+++ G ++ +T G+ PY E+ E ++K + + + + +L + P
Sbjct: 195 HSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSP 254
Query: 781 NPDLRP 786
P RP
Sbjct: 255 EPKCRP 260
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 40/135 (29%)
Query: 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-Q 659
NG P ++ ++ + H+ ++HRD+KP+N+LIS + KL D G ++ L +
Sbjct: 95 NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVL--KLCDFGFARNLSE 152
Query: 660 GDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQG 718
G + T+ Y ++ W ++PE LL
Sbjct: 153 GSNANYTE------------------------------------YVATRWYRSPELLLGA 176
Query: 719 RQTRAIDLFSLGCIL 733
+A+D++S+GCIL
Sbjct: 177 PYGKAVDMWSVGCIL 191
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 4e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
++ G+ HLH G+IHRDLKP N+++ D + K+ D G+++
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL--KILDFGLAR 167
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 5e-04
Identities = 63/256 (24%), Positives = 90/256 (35%), Gaps = 74/256 (28%)
Query: 579 NEVRIRLLPVMENT-----KDIELWKANGHPSAQLLK--VTRDIVSGLSHLHEIGLIHRD 631
NE I L VME K ++ + N H L + + L+++H + HRD
Sbjct: 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRD 195
Query: 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691
LKPQN+LI + KL D G +K L ++ IC
Sbjct: 196 LKPQNLLIDP-NTHTLKLCDFGSAKNLLAGQRSVS--------------------YIC-- 232
Query: 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESF-- 748
S ++APE +L T IDL+SLGCI+ I G G+S
Sbjct: 233 --------------SRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD 278
Query: 749 ------------------ERDANIV---------KDRKDLFLVEHIPEAVDLFTRLLDPN 781
E + N KD K +F +A++ ++ L
Sbjct: 279 QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE 338
Query: 782 PDLRPKAQNVLNHPFF 797
P R L PFF
Sbjct: 339 PLKRLNPIEALADPFF 354
|
Length = 440 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-04
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
P Q L + + I+ GL +LH +IHRD+K +N+ I+ C + D+G
Sbjct: 155 PIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC--IGDLG 202
|
Length = 357 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 6e-04
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
+ LL + I S + +L + IHRDL +N L+ ++ K++D G+S+ + GD
Sbjct: 102 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGD 157
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 6e-04
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 606 AQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
AQLL + I G+++LH IHRDL +NVL+ D+ K+ D G++K
Sbjct: 107 AQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LVKIGDFGLAK 155
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 42.8 bits (100), Expect = 6e-04
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
++ GLS++H+ ++HRDLKPQN+LIS KL+D G+++
Sbjct: 112 LLRGLSYIHQRYILHRDLKPQNLLISDTGEL--KLADFGLAR 151
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 8e-04
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 49/192 (25%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
+I S L +LH + +I+RDLKP+N+L+ D L+D G+ K + +T
Sbjct: 104 EIASALGYLHSLNIIYRDLKPENILL--DSQGHVVLTDFGLCKE---GIEHSKTTST--- 155
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G+ + APE L + R +D + LG +L
Sbjct: 156 --------------FC---------------GTPEYLAPEVLRKQPYDRTVDWWCLGAVL 186
Query: 734 FFCITGGKHPYGESFERDANIVKDR---KDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQ 789
+ + G P+ + RD + D K L L +I A L LL + R A+
Sbjct: 187 YEMLY-GLPPF---YSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK 242
Query: 790 N----VLNHPFF 797
+ + NH FF
Sbjct: 243 DDFLEIKNHVFF 254
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 9/50 (18%)
Query: 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
QLL+ GL++ H+ ++HRDLKPQN+LIS+ KL+D G+++
Sbjct: 111 QLLR-------GLAYCHQRRVLHRDLKPQNLLISERGEL--KLADFGLAR 151
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 42/202 (20%), Positives = 76/202 (37%), Gaps = 60/202 (29%)
Query: 473 KLVVFNKEIAKGSNGTVVLEGNY-----EGRSVAVKRLVKTHHDVALKE--------IQN 519
+ + + I +G G V +G Y E +VAVK K +++E ++
Sbjct: 6 EDITLGRCIGEGQFGDV-YQGVYMSPENEKIAVAVK-TCKNCTSPSVREKFLQEAYIMRQ 63
Query: 520 LIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
HP+IV+ GV ++ V++ +E G L + + L
Sbjct: 64 F----DHPHIVKLIGVITENP-VWIVMELAP----------LGELRSYL---QVNKYSL- 104
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
A L+ + + + L++L +HRD+ +NVL+
Sbjct: 105 ------------------------DLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV 140
Query: 640 SKDKSFCAKLSDMGISKRLQGD 661
S C KL D G+S+ L+ +
Sbjct: 141 SSPD--CVKLGDFGLSRYLEDE 160
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 69/309 (22%)
Query: 498 RSVAVKRLVKTHHDVALKEI----QNLIASDQHPNIVRWYG-VESDQDFVYLSLERCTCS 552
++VA+K L K + L+E + + QHPNIV G V +Q LS+ CS
Sbjct: 36 QAVAIKTL-KDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP---LSMIFSYCS 91
Query: 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612
+DL E L + S++ +T D + K+ P A + +
Sbjct: 92 HSDL--------HEFLVMRSPHSDV------------GSTDDDKTVKSTLEP-ADFVHIV 130
Query: 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL-QGDMSCLTQNATG 671
I +G+ L ++H+DL +NVL+ DK K+SD+G+ + + D L N+
Sbjct: 131 TQIAAGMEFLSSHHVVHKDLATRNVLVF-DK-LNVKISDLGLFREVYAADYYKLMGNS-- 186
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGC 731
LL + W +PE ++ G+ + D++S G
Sbjct: 187 -----------LLPI---------------------RWMSPEAIMYGKFSIDSDIWSYGV 214
Query: 732 ILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQ 789
+L+ + G PY G S + ++++R+ L + P V L + P RP+ +
Sbjct: 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFK 274
Query: 790 NVLNHPFFW 798
++ + W
Sbjct: 275 DIHSRLRTW 283
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 43/176 (24%), Positives = 65/176 (36%), Gaps = 50/176 (28%)
Query: 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSC 664
S LL I G+S+L E+ L+HRDL +NVL+ K++D G+++ L D+
Sbjct: 108 SQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH--VKITDFGLARLL--DIDE 163
Query: 665 LTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAI 724
+A G G W A E +L R T
Sbjct: 164 TEYHADG-------------------------------GKVPIKWMALESILHRRFTHQS 192
Query: 725 DLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDP 780
D++S G ++ +T G PY D IP+ ++ RL P
Sbjct: 193 DVWSYGVTVWELMTFGAKPY---------------DGIPAREIPDLLEKGERLPQP 233
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 70/225 (31%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I+ GL++ H ++HRDLKPQN+LI++ KL+D G+++
Sbjct: 113 ILRGLAYCHRRKVLHRDLKPQNLLINERGEL--KLADFGLARA----------------- 153
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCI 732
S+ K E V + W P +L G + ID++ +GCI
Sbjct: 154 -----KSVPTKTYSNEVV--------------TLWYRPPDVLLGSSEYSTQIDMWGVGCI 194
Query: 733 LFFCITGGKHPYGESFERDANIV--------------------------KDRKDLFLVEH 766
F +G G + E + +++ K L+ H
Sbjct: 195 FFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINH 254
Query: 767 IP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 807
P E ++L T+ L R A+ + H +F + TR+ L
Sbjct: 255 APRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHSL 299
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 64/286 (22%), Positives = 98/286 (34%), Gaps = 78/286 (27%)
Query: 475 VVFNKEIAKGSNGTVVL--------EGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--- 523
+V K + +G G VV+ E VAVK L D K++ +LI+
Sbjct: 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKML---KSDATEKDLSDLISEMEM 76
Query: 524 ----DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
+H NI+ G + +Y+ +E Y G+ E L
Sbjct: 77 MKMIGKHKNIINLLGACTQDGPLYVIVE----------YASKGNLREYL----------- 115
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
R R P ME + L+ + G+ +L IHRDL +NVL+
Sbjct: 116 --RARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173
Query: 640 SKDKSFCAKLSDMGISKRLQG-DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
++D K++D G+++ + D T N
Sbjct: 174 TEDNVM--KIADFGLARDIHHIDYYKKTTN------------------------------ 201
Query: 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
G W APE L T D++S G +L+ T G PY
Sbjct: 202 ----GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
IV L +H ++HRDLK N+ + + KL D G SK+
Sbjct: 178 IVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGFSKQ----------------- 218
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
Y S+ L + C G+ + APE + R ++ D++SLG IL+
Sbjct: 219 ---YSDSVSLDVASSFC-------------GTPYYLAPELWERKRYSKKADMWSLGVILY 262
Query: 735 FCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
+T + P+ +R+ ++ + D F L LL NP LRP Q +L
Sbjct: 263 ELLTLHR-PFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLL 321
Query: 793 NHPFF-WTADTRLSFLRDVSDRVELEDRESDSKLLRALEG 831
+ F + A+ +R S+ + DRE ++LR L+
Sbjct: 322 HTEFLKYVANLFQDIVRH-SETISPHDRE---EILRQLQE 357
|
Length = 478 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 52/211 (24%)
Query: 596 ELWKANGH-PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL--ISKDKSFCAKLSDM 652
+L K G A++ K+ R +V L+ LH+ +IH D+K +NVL +KD+ + L D
Sbjct: 98 DLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIY---LCDY 154
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+ K + G SC D L Y +P
Sbjct: 155 GLCKII-GTPSC-------YDGTLDYF-------------------------------SP 175
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI--VKDR--KDLFLVEHIP 768
E++ + D +++G +L + + GKHP+ E + + ++ + R K L ++++
Sbjct: 176 EKIKGHNYDVSFDWWAVG-VLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVS 234
Query: 769 E-AVDLFTRLLDPNPDLR-PKAQNVLNHPFF 797
+ A D +L N + R ++ HPF
Sbjct: 235 KNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265
|
Length = 267 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ 667
LL T + G+ L +HRDL +NVL+++ K K+ D G+++ + D + +++
Sbjct: 239 LLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK--IVKICDFGLARDIMHDSNYVSK 296
Query: 668 NATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLF 727
+T + ++ W APE + T D++
Sbjct: 297 GSTFLPVK---------------------------------WMAPESIFDNLYTTLSDVW 323
Query: 728 SLGCILFFCITGGKHPY-----GESFERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPN 781
S G +L+ + G PY +F N +K + +H + V D+ + +
Sbjct: 324 SYGILLWEIFSLGGTPYPGMIVDSTF---YNKIKSGYRMAKPDHATQEVYDIMVKCWNSE 380
Query: 782 PDLRP 786
P+ RP
Sbjct: 381 PEKRP 385
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
P LLK DI G+ +L IHRDL +N ++ +D + C ++D G+SK++
Sbjct: 111 PLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVC--VADFGLSKKI 163
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
++ GL+++H ++HRDLKPQN+LIS KL+D G+++
Sbjct: 112 LLRGLAYIHGQHILHRDLKPQNLLISYLGEL--KLADFGLAR 151
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 33/162 (20%)
Query: 500 VAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDL 556
VAVK L D A ++ +++ PNI R GV + + + +E
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIME--------- 99
Query: 557 IYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616
Y+ +G + L +++ L N+K + + LL + I
Sbjct: 100 -YMENGDLNQFLQKHVAETSGLAC----------NSKSL--------SFSTLLYMATQIA 140
Query: 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
SG+ +L + +HRDL +N L+ K++ K++D G+S+ L
Sbjct: 141 SGMRYLESLNFVHRDLATRNCLV--GKNYTIKIADFGMSRNL 180
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 37/192 (19%)
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
+++++ +I G+++L+ +HRDL +N ++++D F K+ D G+++ + +
Sbjct: 117 SLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIY-ETD 173
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
+ G LL + W +PE L G T
Sbjct: 174 YYRKGGKG-----------LLPV---------------------RWMSPESLKDGVFTTY 201
Query: 724 IDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPN 781
D++S G +L+ T + PY G S E+ V + L ++ P+ + +L N
Sbjct: 202 SDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 261
Query: 782 PDLRPKAQNVLN 793
P +RP +++
Sbjct: 262 PKMRPSFLEIIS 273
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISKDKSFCAKLSDM 652
D L KA P L KV+ ++ GL++L E ++HRD+KP N+L++ KL D
Sbjct: 91 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI--KLCDF 148
Query: 653 GISKRLQGDMS 663
G+S +L M+
Sbjct: 149 GVSGQLIDSMA 159
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 49/171 (28%)
Query: 500 VAVKRLVKTHHDVALKEIQNLIAS-------DQHPNIVRWYGVESDQDFVYLSLERCTCS 552
VAVK L + K++ +L++ +H NI+ GV + + +Y+ +E
Sbjct: 45 VAVKMLKDDATE---KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYA--- 98
Query: 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612
NL + +R R P + D P + L
Sbjct: 99 --------------------AHGNLRDFLRARRPPGEYASPDDP------RPPEETLT-Q 131
Query: 613 RDIVS-------GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
+D+VS G+ L IHRDL +NVL+++D K++D G+++
Sbjct: 132 KDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLAR 180
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 35/139 (25%)
Query: 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ 667
L+ + + +G+ L +HRDL +NVLI + K K+ D G+++ + D + +++
Sbjct: 241 LVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK--LVKICDFGLARDIMRDSNYISK 298
Query: 668 NATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLF 727
+T + L+ W APE + T D++
Sbjct: 299 GSTFLPLK---------------------------------WMAPESIFNNLYTTLSDVW 325
Query: 728 SLGCILFFCITGGKHPYGE 746
S G +L+ T G PY E
Sbjct: 326 SFGILLWEIFTLGGTPYPE 344
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 51/183 (27%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRL-------VKTHHDVALKEIQNLIASDQHPNIV 530
+EI GS G V + VA+K++ + D+ +KE++ + +HPN +
Sbjct: 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVK-FLQRIKHPNSI 88
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ G + +L +E C S +DL+ V +E
Sbjct: 89 EYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE------------------------ 124
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
++ +T + GL++LH +IHRD+K N+L+++ KL+
Sbjct: 125 ---------------VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLA 167
Query: 651 DMG 653
D G
Sbjct: 168 DFG 170
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 56/202 (27%), Positives = 82/202 (40%), Gaps = 51/202 (25%)
Query: 470 RIGKLVVFNKE--IAKGSNGTV-----VLEGNYEGRSVAVKRLVKTHHDVALKEIQN--- 519
RI K F K + G+ GTV + EG VA+K L + A KEI +
Sbjct: 2 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 61
Query: 520 LIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
++AS +P++ R G+ C S LI L LL+
Sbjct: 62 VMASVDNPHVCRLLGI-------------CLTSTVQLITQLMPF-----------GCLLD 97
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
VR E+ +I S LL I G+++L E L+HRDL +NVL+
Sbjct: 98 YVR-------EHKDNI--------GSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV 142
Query: 640 SKDKSFCAKLSDMGISKRLQGD 661
+ K++D G++K L D
Sbjct: 143 KTPQH--VKITDFGLAKLLGAD 162
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
+I S L LH+ G+I+RDLK NVL+ + C KL+D G+ K
Sbjct: 104 EITSALMFLHDKGIIYRDLKLDNVLLDHE-GHC-KLADFGMCK 144
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 934 | |||
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.98 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.97 | |
| PF06479 | 129 | Ribonuc_2-5A: Ribonuclease 2-5A; InterPro: IPR0105 | 99.97 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.92 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.91 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.87 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.86 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.82 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.81 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.8 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.78 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.78 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.77 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.75 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.73 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.73 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.69 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.68 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.64 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.62 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.61 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.58 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.58 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.58 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.56 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.55 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.5 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.47 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.47 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.38 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.23 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.19 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.17 | |
| smart00580 | 58 | PUG domain in protein kinases, N-glycanases and ot | 99.17 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.17 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.99 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.95 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.93 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.92 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.88 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.83 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.8 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.71 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.63 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.6 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.59 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.53 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.51 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.46 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.44 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.38 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.35 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.29 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.2 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.19 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.18 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.12 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.08 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 98.03 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 97.94 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 97.86 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.81 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.72 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 97.66 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 97.61 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.56 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.55 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.52 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.49 | |
| PF01011 | 38 | PQQ: PQQ enzyme repeat family.; InterPro: IPR00237 | 97.38 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.35 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.17 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.14 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 97.14 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.13 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 96.98 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 96.58 | |
| smart00564 | 33 | PQQ beta-propeller repeat. Beta-propeller repeat o | 96.5 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 96.44 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.35 | |
| KOG4649 | 354 | consensus PQQ (pyrrolo-quinoline quinone) repeat p | 96.31 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 96.25 | |
| KOG1826 | 2724 | consensus Ras GTPase activating protein RasGAP/neu | 96.22 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.13 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 96.05 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 95.99 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 95.8 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 95.79 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 95.78 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 95.77 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 95.4 | |
| KOG1093 | 725 | consensus Predicted protein kinase (contains TBC a | 95.15 | |
| KOG4649 | 354 | consensus PQQ (pyrrolo-quinoline quinone) repeat p | 95.12 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 94.89 |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-121 Score=1054.69 Aligned_cols=758 Identities=37% Similarity=0.631 Sum_probs=550.3
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHHh
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~ 127 (934)
+++++|||+| .|+|.+.++|.++|++++.|.+.++ ....+ ..|+|+|+||+||.++. .++++||||||||+|+
T Consensus 27 e~~~~~stid-~l~a~s~~~g~~~~~l~~~pvv~~~----~~~~~-~~fl~~p~dgsly~l~~-~~sL~Klpftipelv~ 99 (903)
T KOG1027|consen 27 ENLLLVSTID-SLHAPSSETGFIKWTLSDDPVVASP----DGVLQ-PAFLPDPRDGSLYTLGN-NLSLTKLPFTIPELVN 99 (903)
T ss_pred cccccccccc-cccCccccccceeeeeccCccccCC----ccccc-cccCCCccccceeeccC-CCccccCCccchhhhc
Confidence 5789999999 9999999999999999999999887 34444 89999999999999988 7789999999999999
Q ss_pred cCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEE
Q 002343 128 RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM 207 (934)
Q Consensus 128 ~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 207 (934)
++||+|+||++|+|+|+|+||+||++||+.++++++... ...+||+|
T Consensus 100 ~~pcrssdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~~---------------------------------~~~~v~~g 146 (903)
T KOG1027|consen 100 ASPCRSSDGILYSGSKQDIWYLVDPKTGEIDYTFNTAEP---------------------------------IKQLVYLG 146 (903)
T ss_pred cCcccCCCCeEEecccccceEEecCCccceeEEEecCCc---------------------------------chhheecc
Confidence 999999999999999999999999999999999986431 12489999
Q ss_pred eeeEEEEEecCCCCceEEEEEeeeecccccccccCccccceeecCCC-------CCcc-ccccccCccccccccccceEE
Q 002343 208 RTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGS-------ELGM-DLIGDVESHLPCHTQMTASVY 279 (934)
Q Consensus 208 RtdY~v~~~~~~s~~~~WN~t~~~~~a~~~~~~~~~~~~~~~~~~~~-------~~g~-~~~~~~~~p~~~~~~~~~~~~ 279 (934)
||+|+|.|+|++....+||+|+.||.|.+...+.++.++|+|..|+. +.|. .|.+|.++||+ ++|
T Consensus 147 rt~ytv~m~d~~~~~~~wn~t~~dy~a~~~~~~~~~~~~~~~~~~~g~i~t~D~~~g~~~~~q~~~spvv-------~~~ 219 (903)
T KOG1027|consen 147 RTNYTVTMYDKNVRGKTWNTTFGDYSAQYPSGVRGEKMSHFHSLGNGYIVTVDSESGEKLWLQDLLSPVV-------ALY 219 (903)
T ss_pred cceeEEecccCcccCceeeccccchhccCCCccCCceeEEEeecCCccEEeccCcccceeeccccCCceE-------EEE
Confidence 99999999999999999999999999999888889999999888863 3343 39999999999 588
Q ss_pred EeccCCCCcc-cee------------------------------------------ecc-----------cCCc-ccCCC
Q 002343 280 RLRDNSLPEF-LSV------------------------------------------IGK-----------VAGW-ISLPG 304 (934)
Q Consensus 280 ~~~~~~l~~~-~~~------------------------------------------~~~-----------~~~~-~~l~~ 304 (934)
.+.+++++.. +-+ +++ .+.+ ...|+
T Consensus 220 ~~~~~gl~~~~~~~v~~~t~~~~~~~~~~v~~~~~~~~~~s~~~s~~~~~~~~~l~~~~~~~~l~~~~~~v~~~v~~~~~ 299 (903)
T KOG1027|consen 220 TLFNDGLHSYPFVTVARETYQINALESGTVLLNIAPTKDESPLESSLDFQLLPTLYVGDSSTGLYASFSLVHQNVPLVPR 299 (903)
T ss_pred eeccCceeeecceehhHHHHHHHHhhccccccccCCCcCccccccccccccceeeEecCceeeEEeehhhcccCceeccC
Confidence 8887777551 100 000 0111 11111
Q ss_pred CC-CCCCCCCCCCCC-------CCCCCCCC-CCCCCC-CCCC--------CCCCC-------------------------
Q 002343 305 SS-QNSLLGPVDRNS-------PLFLPDKV-DRPPLA-LPST--------ETEIP------------------------- 341 (934)
Q Consensus 305 ~s-~n~~~g~~p~~~-------~~~~~~~~-~~~~l~-~p~~--------~~~~~------------------------- 341 (934)
.. .-++-|+.+... ..+.+... ..++.. .+.. .+..|
T Consensus 300 ~~t~~~~e~~~~~~~~~~~~~~~~~~~s~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 379 (903)
T KOG1027|consen 300 AATLPLLEGPTTDKVTLQSTGERKFPPSTLLRFPSGSLLRYIANEWLLMGHHELPLVLYTPMAEIHPYNDGTRLPLNNEK 379 (903)
T ss_pred CCCCccccCcccchhhhhhcccccCCchhhhhCCCcccccccccccccccccccchhhhhhHHhhccccCCCCCCCCCcc
Confidence 11 111111111100 00000000 000000 0000 00000
Q ss_pred ---CCCCCCCCC-C-cccccccc-cc-cCcceeehhHHHHHHHHHHHHHHhhhhhhcccccccccccccccCCCCCcCCC
Q 002343 342 ---WTLGMPGGS-V-SEINKKHA-FV-EGFRSYIQSFIVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKTGIPKKKKSR 414 (934)
Q Consensus 342 ---~~~~~~~~~-~-~~~~~~~~-~~-~~~~~~i~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (934)
....++.-. + ++...+.. .. -.+.+..+.+.+.++..++..+.+++... +.++- .....+.. ..++..-
T Consensus 380 ~a~~l~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~i~~~~l~~~~i~~~~~-k~~q~--~~s~~~~k-~~~~~~~ 455 (903)
T KOG1027|consen 380 NAFSLLSLPGPELVESELDPKTDGLPMALLASTPIGLLVLIVCAFLLFFKILGLFG-KNQQP--QVSITKQK-QVEKPSD 455 (903)
T ss_pred cccccccCCChhhhccccCccccCccchhhhcccchhHHHHHHHHHHHHhHhhhhc-cccCc--chhhhhhh-hhccccC
Confidence 000000000 0 00000000 00 00111122222222222222222211111 00000 00000000 0000000
Q ss_pred CCCCCCCCCCccccccccCCCCCCCCCCCCccccCCCcceecccccccccccCceeecceEEE-eeeecccCcEEEEEEE
Q 002343 415 RPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVF-NKEIAKGSNGTVVLEG 493 (934)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~IG~GsfGtVy~~~ 493 (934)
..+......+........+...... .. ...+......-...... .....+.++.+.. .+.+|.|+.|+|++.|
T Consensus 456 ~~~~~~~~~e~se~~~~~~~~s~~~-k~---~~~~~~~~~~~~~~~~~--~~~~~v~~k~~~~~~eilG~Gs~Gt~Vf~G 529 (903)
T KOG1027|consen 456 PKSGTAEENEQSESKDLSPSDSEIS-KK---LSTGSPSSKASSLDGPE--AGGKVVVGKLFFSPKEILGYGSNGTVVFRG 529 (903)
T ss_pred cccccccccccCcccCCCccccccc-cc---cCCCCcccccccccccc--cccceeeeeeeeccHHHcccCCCCcEEEEE
Confidence 0000000000000000000000000 00 00000000000000000 0012334455444 4569999999999999
Q ss_pred EecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhc
Q 002343 494 NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQ 573 (934)
Q Consensus 494 ~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~ 573 (934)
.++||.||||++.....+.+.+||+.++++.+||||||+||...++.|.||++|+|.++|.|++....- +...
T Consensus 530 ~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~---d~~~---- 602 (903)
T KOG1027|consen 530 VYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGL---DVEM---- 602 (903)
T ss_pred eeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhcccc---chhh----
Confidence 999999999999999999999999999999999999999999999999999999999999999975411 1100
Q ss_pred cchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEec---CCCceEEEe
Q 002343 574 DSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK---DKSFCAKLS 650 (934)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~---d~~~~vKLs 650 (934)
.. ....+.++.|+++||+|||+.+||||||||+||||+. ++.++++|+
T Consensus 603 --------------------------~~---~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iS 653 (903)
T KOG1027|consen 603 --------------------------QS---DIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKIS 653 (903)
T ss_pred --------------------------cc---cccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEec
Confidence 00 0234678889999999999999999999999999986 577899999
Q ss_pred eccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchh
Q 002343 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLG 730 (934)
Q Consensus 651 DFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLG 730 (934)
|||+|+++..+.++.....+ ..||.||+|||++.....+.++||||||
T Consensus 654 DfglsKkl~~~~sS~~r~s~--------------------------------~sGt~GW~APE~L~~~~~~~avDiFslG 701 (903)
T KOG1027|consen 654 DFGLSKKLAGGKSSFSRLSG--------------------------------GSGTSGWQAPEQLREDRKTQAVDIFSLG 701 (903)
T ss_pred ccccccccCCCcchhhcccC--------------------------------CCCcccccCHHHHhccccCcccchhhcC
Confidence 99999999998877665333 5699999999999999999999999999
Q ss_pred hhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCH--HHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhhh
Q 002343 731 CILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP--EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLR 808 (934)
Q Consensus 731 vILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~--e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl~ 808 (934)
||+|++++||.|||++..+++.||+.+...+...+..+ ++.|||.+||++||..||+|.+||.|||||+.+++++|++
T Consensus 702 CvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~Fl~ 781 (903)
T KOG1027|consen 702 CVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLSFLR 781 (903)
T ss_pred ceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHHHHH
Confidence 99999999999999999999999999988877665555 9999999999999999999999999999999999999999
Q ss_pred hhcccchhccccchHHHHHHHHhhhhHhcCCcchhhhhHHHHhhhhhhccCCCCCHHHHHHHHHhccCCCccChHHHHHH
Q 002343 809 DVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQEL 888 (934)
Q Consensus 809 ~~sd~~e~~~~~~~~~l~~~le~~~~~~~~~~w~~~~~~~~~~~l~~~r~y~~~~v~dllr~irnk~~h~~el~~~~~~~ 888 (934)
|++||+|++.++..++++++||..+..++.++|++++++.|+++|+|||+|++++||||||+||||+|||+|||++++|+
T Consensus 782 dvSDRvE~e~r~~~s~lL~~le~~~~~vv~~~W~~kl~~~~~~~l~kyR~Yk~~svrDLLR~iRNk~hHyrELp~~v~el 861 (903)
T KOG1027|consen 782 DVSDRVEKENRDSPSELLRALEAGARVVVSGDWTEKLDKTFMDNLRKYRSYKGSSVRDLLRAIRNKKHHYRELPPEVREL 861 (903)
T ss_pred hhhhhhhhhhccCchHHHHhhccCCceEecCchhhhhCHHHHHHHHHhcCcccccHHHHHHHHHhhhhhhhhcCHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCccccccccccCCchHHHHHHHHHhhccCcccccccccc
Q 002343 889 LGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTN 931 (934)
Q Consensus 889 lg~~p~~~~~yf~~~fP~ll~~~y~~~~~~~~~~~~f~~y~~~ 931 (934)
+|.+||||..||++|||+||||||.+|+. |++|+.|++||..
T Consensus 862 lG~vPdgF~~YFt~RFP~Lli~vY~~~~~-c~~E~~F~~Y~~~ 903 (903)
T KOG1027|consen 862 LGDVPDGFDLYFTKRFPNLLIHVYTVLSD-CSGEEIFKKYYSP 903 (903)
T ss_pred cCCCCcHHHHHHHHhhhHHHHHHHHHHHH-ccchhhhhhccCC
Confidence 99999999999999999999999999966 9999999999963
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=434.93 Aligned_cols=257 Identities=31% Similarity=0.520 Sum_probs=209.6
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChh----------HHHHHHHHHHHhCCCCceeEEEEEEe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD----------VALKEIQNLIASDQHPNIVRWYGVES 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~----------~~~~Ei~~ll~~l~HpNIV~l~g~~~ 537 (934)
+.+.+.|.+.+.||+|+||.|-+| ...+|+.||||++.+.... ...+|+ ++|+.++|||||+++++++
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~Ei-eILkkL~HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEI-EILKKLSHPNIVRIKDFFE 246 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHH-HHHHhcCCCCEEEEeeeee
Confidence 446678999999999999999998 5678999999999765321 123555 4899999999999999999
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..+..||||| |+.+|+|.+++..+ ..+.+..-+.+++|++.
T Consensus 247 ~~ds~YmVlE----------~v~GGeLfd~vv~n-----------------------------k~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 247 VPDSSYMVLE----------YVEGGELFDKVVAN-----------------------------KYLREDLGKLLFKQLLT 287 (475)
T ss_pred cCCceEEEEE----------EecCccHHHHHHhc-----------------------------cccccchhHHHHHHHHH
Confidence 9999999999 77778888776542 23345566889999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
||.|||++||+||||||+|||++.+ ..+.+||+|||+|+......
T Consensus 288 avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s---------------------------------- 333 (475)
T KOG0615|consen 288 AVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS---------------------------------- 333 (475)
T ss_pred HHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------------------------
Confidence 9999999999999999999999865 45779999999999865322
Q ss_pred cceeecCCCCCccccchhcccCCC---cccccccchhhhhHHhhcCCCCCCCCchhHH---HHHHhhccc---ccccCCC
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHPYGESFERD---ANIVKDRKD---LFLVEHI 767 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~---t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~---~~i~~~~~~---~~~~~~~ 767 (934)
++.+.||||.|.|||++.+..+ ..++||||+|||||-+++| .+||.+..... .++.+++.. +.+.+.+
T Consensus 334 --fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG-~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Is 410 (475)
T KOG0615|consen 334 --FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG-YPPFSEEYTDPSLKEQILKGRYAFGPLQWDRIS 410 (475)
T ss_pred --ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc-CCCcccccCCccHHHHHhcCcccccChhhhhhh
Confidence 2334799999999999987654 4589999999999999995 88998765432 344444433 2344567
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.++++||.+||..||++|||++|+|+||||+..+.
T Consensus 411 eea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 411 EEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred HHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 89999999999999999999999999999987654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-48 Score=440.23 Aligned_cols=248 Identities=32% Similarity=0.520 Sum_probs=214.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecC------ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
++|...+.||+|+|++||.+.. .+|+.||+|++.+. ..+...+||+ +.+.+.|||||++|++|+|.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIe-IHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIE-IHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHH-HHHhcCCCcEEeeeeEeecCCceEEE
Confidence 7899999999999999999866 78999999999762 2356678886 88999999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
+|+|.. +|.++. . +...++|.+++.+++||+.||.|||+
T Consensus 97 LELC~~~sL~el~-----------K-----------------------------rrk~ltEpEary~l~QIv~GlkYLH~ 136 (592)
T KOG0575|consen 97 LELCHRGSLMELL-----------K-----------------------------RRKPLTEPEARYFLRQIVEGLKYLHS 136 (592)
T ss_pred EEecCCccHHHHH-----------H-----------------------------hcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999984 444443 1 14568899999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|||||||..|+||+ .++.+||+|||||..+..+.... .+.|
T Consensus 137 ~~IiHRDLKLGNlfL~--~~~~VKIgDFGLAt~le~~~Erk-----------------------------------~TlC 179 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLN--ENMNVKIGDFGLATQLEYDGERK-----------------------------------KTLC 179 (592)
T ss_pred cCceecccchhheeec--CcCcEEecccceeeeecCccccc-----------------------------------ceec
Confidence 9999999999999995 44669999999999988653221 1268
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|||.|+|||++....++..+||||+|||||-||.| +|||... .....+.++......+...+.+|+|||.+||++||.
T Consensus 180 GTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G-~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~ 258 (592)
T KOG0575|consen 180 GTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVG-RPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPS 258 (592)
T ss_pred CCCcccChhHhccCCCCCchhhhhhhhHHHhhhhC-CCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999996 8888765 555566677777777778899999999999999999
Q ss_pred CCcCHHHHHcCCCCCC
Q 002343 784 LRPKAQNVLNHPFFWT 799 (934)
Q Consensus 784 ~RPTa~evL~HPff~~ 799 (934)
+|||+++||.|+||..
T Consensus 259 ~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 259 ERPSLDEVLDHPFFKS 274 (592)
T ss_pred cCCCHHHHhcCHhhhC
Confidence 9999999999999943
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=405.53 Aligned_cols=245 Identities=29% Similarity=0.461 Sum_probs=204.4
Q ss_pred EeeeecccCcEEEEEE-EEecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEEEeccc
Q 002343 477 FNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLERCT 550 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-~~yLVmE~c~ 550 (934)
..+.||+|+.|+||++ +..+++.+|+|.+.... ..+..+|++ +++..+||+||.+||+|.+++ .++|+||
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~-il~~~~spyIV~~ygaF~~~~~~isI~mE--- 158 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELE-ILRSCQSPYIVGFYGAFYSNGEEISICME--- 158 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHH-HHhhCCCCCeeeEeEEEEeCCceEEeehh---
Confidence 3568999999999998 55679999999994333 345678887 667779999999999999999 5999999
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCCcc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIH 629 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gIVH 629 (934)
||.+|+|+..+.. .+.+++..+.+|+++|++||.|||+ ++|||
T Consensus 159 -------YMDgGSLd~~~k~-----------------------------~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIH 202 (364)
T KOG0581|consen 159 -------YMDGGSLDDILKR-----------------------------VGRIPEPVLGKIARAVLRGLSYLHEERKIIH 202 (364)
T ss_pred -------hcCCCCHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHhhccCeee
Confidence 7777787776542 2557899999999999999999996 99999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++..|. +||||||.|+.+..... .+.+||..|
T Consensus 203 RDIKPsNlLvNskGe--VKicDFGVS~~lvnS~a-------------------------------------~tfvGT~~Y 243 (364)
T KOG0581|consen 203 RDIKPSNLLVNSKGE--VKICDFGVSGILVNSIA-------------------------------------NTFVGTSAY 243 (364)
T ss_pred ccCCHHHeeeccCCC--EEeccccccHHhhhhhc-------------------------------------ccccccccc
Confidence 999999999977665 99999999998765411 126899999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-------hhHHHHHHhhcccccccC-CCHHHHHHHHHcccCC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-------FERDANIVKDRKDLFLVE-HIPEAVDLFTRLLDPN 781 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-------~~~~~~i~~~~~~~~~~~-~~~e~~dLI~~~L~~D 781 (934)
||||.+.+..|+.++||||||+.++||++| +.||... .+-...|+...++..+.. +++|+++||..||++|
T Consensus 244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~G-rfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kd 322 (364)
T KOG0581|consen 244 MSPERISGESYSVKSDIWSLGLSLLELAIG-RFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKD 322 (364)
T ss_pred cChhhhcCCcCCcccceecccHHHHHHhhC-CCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCC
Confidence 999999999999999999999999999997 5555442 233345555566666665 8999999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCcc
Q 002343 782 PDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~~ 801 (934)
|.+||++.|+++|||+...+
T Consensus 323 p~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 323 PSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred cccCCCHHHHhcCHHHhhcc
Confidence 99999999999999996544
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=403.06 Aligned_cols=251 Identities=31% Similarity=0.505 Sum_probs=205.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..|.+.++||+|+||+||++.+ .++..||||.+.+.. .+...+||. +++.++|||||++++++++++++||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~-iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIK-ILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHH-HHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 3566777899999999999854 568999999997663 345677887 889999999999999999999999999
Q ss_pred eccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||. |+|.+++ +. .+.+++..++.++.||+.||++||++
T Consensus 89 EyC~gGDLs~yi-----------~~-----------------------------~~~l~e~t~r~Fm~QLA~alq~L~~~ 128 (429)
T KOG0595|consen 89 EYCNGGDLSDYI-----------RR-----------------------------RGRLPEATARHFMQQLASALQFLHEN 128 (429)
T ss_pred EeCCCCCHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9998 4565555 22 34678999999999999999999999
Q ss_pred CCcccCCCCCeEEEecC-CC---ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 626 GLIHRDLKPQNVLISKD-KS---FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d-~~---~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
+||||||||+||||+.. +. .++||+|||+|+.+.+.... .
T Consensus 129 ~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a------------------------------------~ 172 (429)
T KOG0595|consen 129 NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMA------------------------------------E 172 (429)
T ss_pred CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHH------------------------------------H
Confidence 99999999999999864 22 67999999999998754321 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccc---ccccCCCHHHHHHHHHc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKD---LFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~---~~~~~~~~e~~dLI~~~ 777 (934)
+.|||+.|||||++..++|+.|+|+||+|+|+|+|++| ++||.... .+....++.... ......+++..+|+...
T Consensus 173 tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g-~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~l 251 (429)
T KOG0595|consen 173 TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTG-KPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISL 251 (429)
T ss_pred HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhC-CCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHH
Confidence 26899999999999999999999999999999999996 77887543 333333322222 22233456778999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
|+.+|..|.+..+.+.||+.+...
T Consensus 252 l~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 252 LQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HhcCccccCchHHhhhhhhcccCc
Confidence 999999999999999999998765
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=400.31 Aligned_cols=264 Identities=29% Similarity=0.363 Sum_probs=214.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
+.|.+.++||+|+||+|+.+.. .+++.+|+|++++... ....+.+..++..++||.||+++..|++.+.+|||+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 4578899999999999999854 5689999999987542 112233345788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
| |+.+|.|.-+|.+ ...+++..++-++.+|+.||.|||++|
T Consensus 105 d----------~~~GGeLf~hL~~-----------------------------eg~F~E~~arfYlaEi~lAL~~LH~~g 145 (357)
T KOG0598|consen 105 D----------YLNGGELFYHLQR-----------------------------EGRFSEDRARFYLAEIVLALGYLHSKG 145 (357)
T ss_pred e----------ccCCccHHHHHHh-----------------------------cCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 9 8888988887753 355788889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+||||+.+|+ ++|+|||||+....+... ..+.|||
T Consensus 146 IiyRDlKPENILLd~~GH--i~LtDFgL~k~~~~~~~~-----------------------------------t~tfcGT 188 (357)
T KOG0598|consen 146 IIYRDLKPENILLDEQGH--IKLTDFGLCKEDLKDGDA-----------------------------------TRTFCGT 188 (357)
T ss_pred eeeccCCHHHeeecCCCc--EEEeccccchhcccCCCc-----------------------------------cccccCC
Confidence 999999999999977765 999999999965433211 0126899
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcc-cccccCCCHHHHHHHHHcccCCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+.|||||++.+..|+.++|+|||||++|||++|..|+++.........+...+ ...+.-.+.+++|||+++|..||++|
T Consensus 189 ~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~R 268 (357)
T KOG0598|consen 189 PEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQR 268 (357)
T ss_pred ccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHh
Confidence 99999999999999999999999999999999744444554444444444444 33334478999999999999999999
Q ss_pred c----CHHHHHcCCCCCCccchhhhhhhhcc
Q 002343 786 P----KAQNVLNHPFFWTADTRLSFLRDVSD 812 (934)
Q Consensus 786 P----Ta~evL~HPff~~~~~~~~fl~~~sd 812 (934)
. .+.++-+||||...+++..+...+..
T Consensus 269 Lg~~~d~~~ik~HpfF~~inW~~l~~k~l~P 299 (357)
T KOG0598|consen 269 LGGPGDAEEIKRHPFFKGINWEKLLAKKLSP 299 (357)
T ss_pred cCCCCChHHhhcCcccccCCHHHHHhcCCCC
Confidence 5 68999999999999887766665543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-45 Score=403.78 Aligned_cols=269 Identities=28% Similarity=0.379 Sum_probs=211.1
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~ 542 (934)
--+.|.+++.||+|+|++|++| ...+++.+|||++.+... +...+|- +.|..+ .||.||+||..|+|+..+
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek-~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREK-EALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHH-HHHHHhhCCCCeEEEEEEeecccce
Confidence 3456889999999999999998 456799999999976532 1222332 244444 999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|+| |.++|+|.++++. .+.+++...+.++.||+.||+||
T Consensus 150 YFvLe----------~A~nGdll~~i~K-----------------------------~Gsfde~caR~YAAeIldAleyl 190 (604)
T KOG0592|consen 150 YFVLE----------YAPNGDLLDLIKK-----------------------------YGSFDETCARFYAAEILDALEYL 190 (604)
T ss_pred EEEEE----------ecCCCcHHHHHHH-----------------------------hCcchHHHHHHHHHHHHHHHHHH
Confidence 99999 5556666666543 34566778899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+||||+.|+ ++||+|||.|+.+.+.......... +. ....-...
T Consensus 191 H~~GIIHRDlKPENILLd~dm--hikITDFGsAK~l~~~~~~~~~~~~--~~--------------------~a~s~~~S 246 (604)
T KOG0592|consen 191 HSNGIIHRDLKPENILLDKDG--HIKITDFGSAKILSPSQKSQENPVD--PN--------------------QASSRRSS 246 (604)
T ss_pred HhcCceeccCChhheeEcCCC--cEEEeeccccccCChhhccccCccC--cc--------------------cccCcccc
Confidence 999999999999999996665 5999999999998875443211000 00 00000134
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
++||..|.+||+|..+..+.++|||+||||+|+|+.| .|||....+- ..+.+......++..+++.++|||+++|..|
T Consensus 247 FVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG-~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 247 FVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAG-QPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRD 325 (604)
T ss_pred eeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcC-CCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccC
Confidence 7899999999999999999999999999999999996 8888765443 3334444455677788899999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCccchh
Q 002343 782 PDLRPKAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~~~~~ 804 (934)
|.+|+|+++|.+||||.+.++.-
T Consensus 326 p~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 326 PSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred ccccccHHHHhhCcccccCChhh
Confidence 99999999999999998877653
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=381.71 Aligned_cols=247 Identities=27% Similarity=0.407 Sum_probs=197.2
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.....+|+|+||+||+++. .+|+.||||++..... +.++|||. ++++++|||+|.++++|.....++||+||
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIr-mLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIR-MLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHH-HHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 44456799999999999855 5699999999987654 35788887 88999999999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|+.++.+.+.. ..+|++.+.++++++|++.|+.|+|+++||
T Consensus 83 ~dhTvL~eLe~---------------------------------------~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~I 123 (396)
T KOG0593|consen 83 CDHTVLHELER---------------------------------------YPNGVPSELVKKYLYQLLKAIHFCHKNNCI 123 (396)
T ss_pred cchHHHHHHHh---------------------------------------ccCCCCHHHHHHHHHHHHHHhhhhhhcCee
Confidence 99875554421 156788999999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||||+..+. +||||||+|+.+...... +|..+.|..
T Consensus 124 HRDIKPENILit~~gv--vKLCDFGFAR~L~~pgd~-----------------------------------YTDYVATRW 166 (396)
T KOG0593|consen 124 HRDIKPENILITQNGV--VKLCDFGFARTLSAPGDN-----------------------------------YTDYVATRW 166 (396)
T ss_pred cccCChhheEEecCCc--EEeccchhhHhhcCCcch-----------------------------------hhhhhhhhh
Confidence 9999999999987764 999999999988743221 233578999
Q ss_pred cccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc-------------ccc-----------
Q 002343 709 WQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK-------------DLF----------- 762 (934)
Q Consensus 709 Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~-------------~~~----------- 762 (934)
|+|||.+.+ .+|+.++||||+||++.||++|...+-+.+.-.+ ..|.+... +.+
T Consensus 167 YRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ 246 (396)
T KOG0593|consen 167 YRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHP 246 (396)
T ss_pred ccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCc
Confidence 999999998 6899999999999999999997444434432222 22221110 000
Q ss_pred ------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 763 ------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 763 ------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
.+..+..+.||+++||..||++|++.+++|.||||.
T Consensus 247 epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 247 EPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred cchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 011234678999999999999999999999999993
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=400.66 Aligned_cols=289 Identities=28% Similarity=0.364 Sum_probs=211.5
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh-----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
-+.|.+.++||+|+||.||++.. .+|..+|+|++++.... ...+.+..+|...++|+||++|..|++.+++|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 35688899999999999999955 56999999999876431 2234445677789999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|| |+++|++...|-. ...|+++.++.++.+++.|++-||++
T Consensus 220 ME----------ylPGGD~mTLL~~-----------------------------~~~L~e~~arfYiaE~vlAI~~iH~~ 260 (550)
T KOG0605|consen 220 ME----------YLPGGDMMTLLMR-----------------------------KDTLTEDWARFYIAETVLAIESIHQL 260 (550)
T ss_pred EE----------ecCCccHHHHHHh-----------------------------cCcCchHHHHHHHHHHHHHHHHHHHc
Confidence 99 7777887766532 45678999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCccccc-----------CCCCcchhhH-HHHHHHhhhhhhcccc
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ-----------NATGMDLQLV-YLVSILLKLVICECVF 693 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~ 693 (934)
|+|||||||+|+||+..|+ +||+|||||+-+......... .....+.... ...+..-.....+...
T Consensus 261 gyIHRDIKPdNlLiD~~GH--iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 261 GYIHRDIKPDNLLIDAKGH--IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred CcccccCChhheeecCCCC--EeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 9999999999999977765 999999999765542211100 0000000000 0000000000000000
Q ss_pred ccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-Cch-hHHHHHHhhccccccc---CCCH
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESF-ERDANIVKDRKDLFLV---EHIP 768 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~-~~~~~i~~~~~~~~~~---~~~~ 768 (934)
..........+|||.|||||++.+..|+..||+|||||||||||.| .|||. +.. +...+++.++..+..+ ..++
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvG-yPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~ 417 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVG-YPPFCSETPQETYRKIVNWRETLKFPEEVDLSD 417 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhhhccCCCcCcccH
Confidence 1111122236899999999999999999999999999999999997 66664 433 3345677776544333 3468
Q ss_pred HHHHHHHHcccCCCCCCcC---HHHHHcCCCCCCccch
Q 002343 769 EAVDLFTRLLDPNPDLRPK---AQNVLNHPFFWTADTR 803 (934)
Q Consensus 769 e~~dLI~~~L~~DP~~RPT---a~evL~HPff~~~~~~ 803 (934)
+++|||.+||. ||++|.. ++||.+||||.+.++.
T Consensus 418 eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~ 454 (550)
T KOG0605|consen 418 EAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWD 454 (550)
T ss_pred HHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcc
Confidence 99999999999 9999974 8999999999887764
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-45 Score=399.25 Aligned_cols=254 Identities=29% Similarity=0.480 Sum_probs=201.1
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYL 544 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-~~yL 544 (934)
+-++|.+.++||.|+||.||+|. ..+|..||||+|++... -..+||++.|.+.-.|||||++.+++.+.+ .+|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34678888999999999999984 46689999999987653 245799986655444999999999999988 9999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||++++|.+++.- +...+++.+++.|+.||++||+|+|.
T Consensus 88 VfE~Md~NLYqLmK~---------------------------------------R~r~fse~~irnim~QilqGL~hiHk 128 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKD---------------------------------------RNRLFSESDIRNIMYQILQGLAHIHK 128 (538)
T ss_pred eHHhhhhhHHHHHhh---------------------------------------cCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888731 13567899999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|+.||||||+|||+.. ...+||+||||||.+..... +|..+
T Consensus 129 ~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~SkpP------------------------------------YTeYV 170 (538)
T KOG0661|consen 129 HGFFHRDLKPENILISG--NDVIKIADFGLAREVRSKPP------------------------------------YTEYV 170 (538)
T ss_pred cCcccccCChhheEecc--cceeEecccccccccccCCC------------------------------------cchhh
Confidence 99999999999999953 34699999999998754322 23467
Q ss_pred CCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHh--h-------------------ccc-
Q 002343 705 GSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVK--D-------------------RKD- 760 (934)
Q Consensus 705 GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~--~-------------------~~~- 760 (934)
.|..|+|||++... -|+.++|||++|||++|+.+-+..+-|... ++...+.. + ..+
T Consensus 171 STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~ 250 (538)
T KOG0661|consen 171 STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQ 250 (538)
T ss_pred hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCc
Confidence 89999999998754 579999999999999999996444444332 22222110 0 000
Q ss_pred -------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 761 -------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 761 -------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
...+..++++.+||.+||.+||++||||+|+|+||||....
T Consensus 251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred CCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 01122467999999999999999999999999999997654
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=370.61 Aligned_cols=256 Identities=26% Similarity=0.391 Sum_probs=214.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|...+.||.|+||+|.+.+. .+|..+|+|++.+... +....| ..+++.+.||+++++++.+.+.+++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nE-k~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNE-KRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhH-HHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 3466678999999999999754 5689999999976542 122333 4588889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|| |+++|.|..+|+. .+.+++..++.++.||+.||+|||++
T Consensus 123 me----------yv~GGElFS~Lrk-----------------------------~~rF~e~~arFYAAeivlAleylH~~ 163 (355)
T KOG0616|consen 123 ME----------YVPGGELFSYLRK-----------------------------SGRFSEPHARFYAAEIVLALEYLHSL 163 (355)
T ss_pred Ee----------ccCCccHHHHHHh-----------------------------cCCCCchhHHHHHHHHHHHHHHHHhc
Confidence 99 8888999988864 45678899999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|++|||||+||||+++|. +||+|||+|+.+.... -+.||
T Consensus 164 ~iiYRDLKPENiLlD~~G~--iKitDFGFAK~v~~rT--------------------------------------~TlCG 203 (355)
T KOG0616|consen 164 DIIYRDLKPENLLLDQNGH--IKITDFGFAKRVSGRT--------------------------------------WTLCG 203 (355)
T ss_pred CeeeccCChHHeeeccCCc--EEEEeccceEEecCcE--------------------------------------EEecC
Confidence 9999999999999977765 9999999999876531 12689
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
||.|+|||++....|+.++|+|||||++|||+.|..|+|..........+......++...+++++|||.++|+.|-.+|
T Consensus 204 TPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 204 TPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 99999999999999999999999999999999975444455554555555556667778889999999999999999999
Q ss_pred -----cCHHHHHcCCCCCCccchhhhhh
Q 002343 786 -----PKAQNVLNHPFFWTADTRLSFLR 808 (934)
Q Consensus 786 -----PTa~evL~HPff~~~~~~~~fl~ 808 (934)
....+|.+||||.+.++..-.-+
T Consensus 284 ~gnlknG~~dIk~H~wF~~v~W~~i~~r 311 (355)
T KOG0616|consen 284 FGNLKNGVEDIKNHPWFKGVDWEAILQR 311 (355)
T ss_pred hcCcCCCccccccCcccccccHHHHhhc
Confidence 46789999999998888654443
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=400.22 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=211.3
Q ss_pred eEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChhH-----HHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~~-----~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|.+.+.||+|+||.||++ +.++.+.||+|.+.+..... ..+|+. +++.++|||||.++++|+...++|+|+|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~-i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVR-ILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHH-HHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5677789999999999998 55778999999997755422 455655 8899999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.|+|..++. .+..+|+++++.++.|++.||.|||+++|
T Consensus 82 ~a~g~L~~il~----------------------------------------~d~~lpEe~v~~~a~~LVsaL~yLhs~ri 121 (808)
T KOG0597|consen 82 YAVGDLFTILE----------------------------------------QDGKLPEEQVRAIAYDLVSALYYLHSNRI 121 (808)
T ss_pred hhhhhHHHHHH----------------------------------------hccCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99887666552 14668999999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+|||+||+|||+..++ .+|+||||+|+.+...... .+...|||
T Consensus 122 lhrd~kPqniLl~~~~--~~KlcdFg~Ar~m~~~t~v-----------------------------------ltsikGtP 164 (808)
T KOG0597|consen 122 LHRDMKPQNILLEKGG--TLKLCDFGLARAMSTNTSV-----------------------------------LTSIKGTP 164 (808)
T ss_pred ccccCCcceeeecCCC--ceeechhhhhhhcccCcee-----------------------------------eeeccCcc
Confidence 9999999999995554 5999999999987653322 23367999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
.|||||++.+..|+..+|+||+|||+|||++|..|+|..........+...+...+...+.++++|+..+|.+||.+|.|
T Consensus 165 lYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~Rlt 244 (808)
T KOG0597|consen 165 LYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLT 244 (808)
T ss_pred cccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhccc
Confidence 99999999999999999999999999999997555555566666666666666777788899999999999999999999
Q ss_pred HHHHHcCCCCCCc
Q 002343 788 AQNVLNHPFFWTA 800 (934)
Q Consensus 788 a~evL~HPff~~~ 800 (934)
..+++.|||+...
T Consensus 245 W~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 245 WTDLLGHPFWKGK 257 (808)
T ss_pred HHHHhcChHHhhh
Confidence 9999999998553
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=399.18 Aligned_cols=249 Identities=30% Similarity=0.429 Sum_probs=212.6
Q ss_pred eEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
-|++++.||+|+-|.|-+| +..+|+.+|||++.+.. .....+||. +|+.+.||||+++|+++++..++|+|+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIv-iMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIV-IMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhH-HHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3677899999999999998 55789999999997652 235678887 889999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
| |+++|.|+++|.. .+++++.+..++++||+.|+.|+|..+
T Consensus 92 E----------yv~gGELFdylv~-----------------------------kG~l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 92 E----------YVPGGELFDYLVR-----------------------------KGPLPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred E----------ecCCchhHHHHHh-----------------------------hCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 9 7778888877643 577899999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|+||+..++ +||+|||+|..-.++.- ..+.||+
T Consensus 133 icHRDLKpENlLLd~~~n--IKIADFGMAsLe~~gkl------------------------------------LeTSCGS 174 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDVKNN--IKIADFGMASLEVPGKL------------------------------------LETSCGS 174 (786)
T ss_pred ceeccCCchhhhhhcccC--EeeeccceeecccCCcc------------------------------------ccccCCC
Confidence 999999999999976665 99999999976544321 1236899
Q ss_pred CccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|.|.|||++.+.+| +.++||||+|||||.|||| +.||++..- .....++......+...+++++|||.+||..||++
T Consensus 175 PHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG-~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~ 253 (786)
T KOG0588|consen 175 PHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTG-KLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPST 253 (786)
T ss_pred cccCCchhhcCCCCCCCccccchhHHHHHHHHhC-CCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccc
Confidence 99999999999999 7899999999999999996 788876544 34455555555556777899999999999999999
Q ss_pred CcCHHHHHcCCCCCCcc
Q 002343 785 RPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 785 RPTa~evL~HPff~~~~ 801 (934)
|.|.+||++|||+....
T Consensus 254 RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 254 RITTEEILKHPFLSGYT 270 (786)
T ss_pred cccHHHHhhCchhhcCC
Confidence 99999999999996643
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=393.28 Aligned_cols=251 Identities=27% Similarity=0.430 Sum_probs=202.3
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecC-----C---hhHHHHHHHHHHHhCC-CCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----H---HDVALKEIQNLIASDQ-HPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~-----~---~~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~ 540 (934)
..+.|.+.+.||+|+||+|+++ ...+|+.||||.+.+. . .+...+|+. +++.++ ||||+++++++....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~-~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREIS-ILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHH-HHHHhccCCCEeEEEEEEecCC
Confidence 3457889999999999999998 5567899999977653 1 234456876 667777 999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|+|||||.+ |+|.+++.. .+.+.+.+++.+++||++|++
T Consensus 94 ~~~ivmEy~~g----------GdL~~~i~~-----------------------------~g~l~E~~ar~~F~Qlisav~ 134 (370)
T KOG0583|consen 94 KIYIVMEYCSG----------GDLFDYIVN-----------------------------KGRLKEDEARKYFRQLISAVA 134 (370)
T ss_pred eEEEEEEecCC----------ccHHHHHHH-----------------------------cCCCChHHHHHHHHHHHHHHH
Confidence 99999997764 444444332 345677889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeecccccccc-CCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ-GDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
|||++||+||||||+|||++.+. .++||+|||++.... .+..
T Consensus 135 y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~~~~~~------------------------------------ 177 (370)
T KOG0583|consen 135 YCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISPGEDGL------------------------------------ 177 (370)
T ss_pred HHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccCCCCCc------------------------------------
Confidence 99999999999999999997662 459999999999874 2211
Q ss_pred eecCCCCCccccchhcccCC-C-cccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccccCC-CHHHHHHHH
Q 002343 700 FTVGYGSSGWQAPEQLLQGR-Q-TRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEH-IPEAVDLFT 775 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~-~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~~~-~~e~~dLI~ 775 (934)
..+.|||+.|+|||++.+.. | +.++||||+||+||.|++| ..||.+.... ....+.......+... ++++++||.
T Consensus 178 l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G-~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~ 256 (370)
T KOG0583|consen 178 LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCG-RLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIE 256 (370)
T ss_pred ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhC-CCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHH
Confidence 12378999999999999987 8 5899999999999999996 7788764332 3333444444445555 899999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
+||..||.+|+|+.++++||||..
T Consensus 257 ~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 257 KMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999999986
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=382.41 Aligned_cols=255 Identities=29% Similarity=0.469 Sum_probs=196.0
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQD--FVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--~~yLVmE~ 548 (934)
+...+.||+|+||+||++.. .+|+..|||.+.... .+...+|+. ++..++|||||+++|...... .++|.||
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~-iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE- 96 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIR-ILSRLNHPNIVQYYGSSSSRENDEYNIFME- 96 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHH-HHHhCCCCCEEeeCCccccccCeeeEeeee-
Confidence 44578899999999999855 449999999987554 233567776 888889999999999855554 6999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|+++|+|.+++... ..+++++.++.+.+||+.||+|||++|||
T Consensus 97 ---------y~~~GsL~~~~~~~----------------------------g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 97 ---------YAPGGSLSDLIKRY----------------------------GGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred ---------ccCCCcHHHHHHHc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 55556666554321 11579999999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.. +..+||+|||+++........... .....||+.
T Consensus 140 H~DiK~~NiLl~~~-~~~~KlaDFG~a~~~~~~~~~~~~--------------------------------~~~~~Gtp~ 186 (313)
T KOG0198|consen 140 HCDIKPANILLDPS-NGDVKLADFGLAKKLESKGTKSDS--------------------------------ELSVQGTPN 186 (313)
T ss_pred ccCcccceEEEeCC-CCeEEeccCccccccccccccccc--------------------------------cccccCCcc
Confidence 99999999999763 234999999999987641111000 011569999
Q ss_pred cccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCc-h--hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCC
Q 002343 709 WQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGES-F--ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 709 Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~-~--~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|||||++.++.. ..++|||||||++.||+|| ++||.+. . .....+.... .+..+...++++++||.+|+..||+
T Consensus 187 ~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg-~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~ 265 (313)
T KOG0198|consen 187 YMAPEVIRNGEVARRESDIWSLGCTVVEMLTG-KPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPE 265 (313)
T ss_pred ccCchhhcCCCcCCccchhhhcCCEEEeccCC-CCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcc
Confidence 999999996433 4599999999999999997 8888763 1 1122222222 2344556778999999999999999
Q ss_pred CCcCHHHHHcCCCCCCccc
Q 002343 784 LRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~~ 802 (934)
+||||+++|+|||......
T Consensus 266 ~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 266 KRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred cCcCHHHHhhChhhhcccc
Confidence 9999999999999866544
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=393.65 Aligned_cols=251 Identities=27% Similarity=0.434 Sum_probs=207.9
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
......|...++||+|+-|.||.+ ...+++.||||++..... +..+.|+. +|+..+|+|||++++.|.-.+.+|+
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~-Vm~~~~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEIL-VMRDLHHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHH-HHHhccchHHHHHHHHhcccceeEE
Confidence 344466777889999999999998 456789999999975543 56778887 8889999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||| ||.+|+|.+.+. ...+++.++..|+++++.||+|||.
T Consensus 348 VME----------ym~ggsLTDvVt------------------------------~~~~~E~qIA~Icre~l~aL~fLH~ 387 (550)
T KOG0578|consen 348 VME----------YMEGGSLTDVVT------------------------------KTRMTEGQIAAICREILQGLKFLHA 387 (550)
T ss_pred EEe----------ecCCCchhhhhh------------------------------cccccHHHHHHHHHHHHHHHHHHHh
Confidence 999 666677665442 2336788999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+|||||.+|||++.++. +||+|||+|..+....... ++.+
T Consensus 388 ~gIiHrDIKSDnILL~~~g~--vKltDFGFcaqi~~~~~KR-----------------------------------~TmV 430 (550)
T KOG0578|consen 388 RGIIHRDIKSDNILLTMDGS--VKLTDFGFCAQISEEQSKR-----------------------------------STMV 430 (550)
T ss_pred cceeeeccccceeEeccCCc--EEEeeeeeeeccccccCcc-----------------------------------cccc
Confidence 99999999999999988876 9999999999887755321 1267
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccc---cccCCCHHHHHHHHHcccC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDL---FLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~---~~~~~~~e~~dLI~~~L~~ 780 (934)
|||.|||||++....|++++||||||++++||+-| .|||- +...+....+...... .+...+++++||+.+||+.
T Consensus 431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveG-EPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~ 509 (550)
T KOG0578|consen 431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVV 509 (550)
T ss_pred CCCCccchhhhhhcccCccccchhhhhHHHHHhcC-CCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999997 56654 5555554444332221 2344689999999999999
Q ss_pred CCCCCcCHHHHHcCCCCC
Q 002343 781 NPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~ 798 (934)
|+.+|++|.|+|+||||.
T Consensus 510 dv~~RasA~eLL~HpFl~ 527 (550)
T KOG0578|consen 510 DVEQRASAKELLEHPFLK 527 (550)
T ss_pred chhcCCCHHHHhcChhhh
Confidence 999999999999999993
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=372.16 Aligned_cols=263 Identities=25% Similarity=0.358 Sum_probs=210.3
Q ss_pred cceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.|.+.++||.|..++||+| ....+..||||++.-... +...+|++ .++.++|||||+++++|..+..+|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~-~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQ-TMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHH-HhhhcCCCCcceEEEEEEecceeEEee
Confidence 467889999999999999998 456789999999975443 34566766 789999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
. +|..|++.+.+... ...|+++..+..|++++++||.|||.+|
T Consensus 104 p----------fMa~GS~ldIik~~---------------------------~~~Gl~E~~Ia~iLre~LkaL~YLH~~G 146 (516)
T KOG0582|consen 104 P----------FMAGGSLLDIIKTY---------------------------YPDGLEEASIATILREVLKALDYLHQNG 146 (516)
T ss_pred h----------hhcCCcHHHHHHHH---------------------------ccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9 77778777766432 2467889999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
.||||||+.||||+.+|. |||+|||.+..+......... -+.+.+||
T Consensus 147 ~IHRdvKAgnILi~~dG~--VkLadFgvsa~l~~~G~R~~~-------------------------------rf~tfvgt 193 (516)
T KOG0582|consen 147 HIHRDVKAGNILIDSDGT--VKLADFGVSASLFDSGDRQVT-------------------------------RFNTFVGT 193 (516)
T ss_pred ceecccccccEEEcCCCc--EEEcCceeeeeecccCceeeE-------------------------------eeccccCc
Confidence 999999999999988876 999999998877653311100 01347899
Q ss_pred Cccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHH--HHhhcccccc---------cCCCHHHHHH
Q 002343 707 SGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN--IVKDRKDLFL---------VEHIPEAVDL 773 (934)
Q Consensus 707 ~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~--i~~~~~~~~~---------~~~~~e~~dL 773 (934)
+.|||||++.+ ..|+.|+||||||++..||++| ..||.......+- .+++.++... ...+..++.+
T Consensus 194 p~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G-~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~ 272 (516)
T KOG0582|consen 194 PCWMAPEVLMQQLHGYDFKADIWSFGITACELAHG-HAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREM 272 (516)
T ss_pred ccccChHHhhhcccCccchhhhhhhhHHHHHHhcC-CCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHH
Confidence 99999999765 4689999999999999999996 8888876544332 2333332110 1123578999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCccchhhh
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSF 806 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~~~~~~f 806 (934)
|..||+.||.+||||+++|+|+||.....+...
T Consensus 273 i~~CL~kDP~kRptAskLlkh~FFk~~k~~~~~ 305 (516)
T KOG0582|consen 273 IALCLVKDPSKRPTASKLLKHAFFKKAKSKEYL 305 (516)
T ss_pred HHHHhhcCcccCCCHHHHhccHHHhhccchhhc
Confidence 999999999999999999999999877655443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=353.82 Aligned_cols=249 Identities=25% Similarity=0.361 Sum_probs=200.1
Q ss_pred eEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|...+.||+|.||.||+| +..+|+.||||++..... ..++|||+ +++.++|+||+.++++|-+.+.+-||+|
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK-~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIK-LLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHH-HHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4566788999999999998 567899999999975432 36899998 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|++.+|+..+.- +...+...+++.++.++++||+|||++.|
T Consensus 82 fm~tdLe~vIkd---------------------------------------~~i~l~pa~iK~y~~m~LkGl~y~H~~~I 122 (318)
T KOG0659|consen 82 FMPTDLEVVIKD---------------------------------------KNIILSPADIKSYMLMTLKGLAYCHSKWI 122 (318)
T ss_pred eccccHHHHhcc---------------------------------------cccccCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 988888776621 13456788999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||.|+||+.++. +||+|||+|+.+.......++ .+-|.
T Consensus 123 lHRDlKPnNLLis~~g~--lKiADFGLAr~f~~p~~~~~~-----------------------------------~V~TR 165 (318)
T KOG0659|consen 123 LHRDLKPNNLLISSDGQ--LKIADFGLARFFGSPNRIQTH-----------------------------------QVVTR 165 (318)
T ss_pred hcccCCccceEEcCCCc--EEeecccchhccCCCCccccc-----------------------------------ceeee
Confidence 99999999999988775 999999999988765443322 24688
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCC-chhHHHH-HHhh-----------------------cccc
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDAN-IVKD-----------------------RKDL 761 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~-i~~~-----------------------~~~~ 761 (934)
.|+|||.+.+. .|+..+||||.|||+.||+-| .|.|.. +.-++.. +... .+..
T Consensus 166 WYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~ 244 (318)
T KOG0659|consen 166 WYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKP 244 (318)
T ss_pred eccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCC
Confidence 99999999875 589999999999999999995 555543 3222222 1110 0000
Q ss_pred ----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 762 ----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 762 ----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.....+.++.||+.+||..||.+|+|++|+|+||||.+.
T Consensus 245 ~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 245 PLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred ccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 112235688999999999999999999999999999763
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=367.27 Aligned_cols=242 Identities=23% Similarity=0.371 Sum_probs=192.5
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEE-EEecCCe-EEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYG-VESDQDF-VYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g-~~~~~~~-~yL 544 (934)
..|.+.++||+|+||+||++ ...+|..||.|.+.-.. .+...+|+. ++++++|||||++|+ .+.+++. ++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~-lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEIS-LLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHH-HHHhcCCchHHHHHHHhhhccchhhHH
Confidence 44677889999999999998 67899999999886322 245677876 899999999999998 4555555 999
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||+|+ |+|..++..- .. ....+|+..+++++.|+++||.++|
T Consensus 98 vmE~c~~GDLsqmIk~~--------K~----------------------------qkr~ipE~~Vwk~f~QL~~AL~~cH 141 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHF--------KK----------------------------QKRLIPEKTVWKYFVQLCRALYHCH 141 (375)
T ss_pred HHHhhcccCHHHHHHHH--------Hh----------------------------ccccCchHHHHHHHHHHHHHHHHHh
Confidence 999998 4666665320 00 1345799999999999999999999
Q ss_pred H--CC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 624 E--IG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 624 s--~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+ .+ |+||||||.||+|+.+| .|||+||||++.+......
T Consensus 142 ~~~~r~~VmHRDIKPaNIFl~~~g--vvKLGDfGL~r~l~s~~tf----------------------------------- 184 (375)
T KOG0591|consen 142 SKIPRGTVMHRDIKPANIFLTANG--VVKLGDFGLGRFLSSKTTF----------------------------------- 184 (375)
T ss_pred ccccccceeeccCcchheEEcCCC--ceeeccchhHhHhcchhHH-----------------------------------
Confidence 9 45 99999999999997666 5999999999998764321
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccc-ccc-cCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKD-LFL-VEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~-~~~-~~~~~e~~dLI~~~ 777 (934)
.+..+|||.||+||.+...+|+.++||||+||++|||+.-..|+++++.......+..... ..+ ...+.++..||..|
T Consensus 185 A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~c 264 (375)
T KOG0591|consen 185 AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMC 264 (375)
T ss_pred HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHH
Confidence 2236899999999999999999999999999999999997555566665555444443322 122 34578999999999
Q ss_pred ccCCCCCCcCH
Q 002343 778 LDPNPDLRPKA 788 (934)
Q Consensus 778 L~~DP~~RPTa 788 (934)
+..||+.||+.
T Consensus 265 i~vd~~~RP~t 275 (375)
T KOG0591|consen 265 IAVDPEQRPDT 275 (375)
T ss_pred ccCCcccCCCc
Confidence 99999999986
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=358.63 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=203.0
Q ss_pred eecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeec-----CChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.+.|.+.++||+|.|+.|++. +..+|+.+|+|.+.- ...+...+|+ .+...++|||||++++.+....+.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEa-rIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA-RICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHH-HHHHhcCCCcEeehhhhhcccceeE
Confidence 34556777889999999999986 567799999887743 2233444555 4889999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||+| .|.+|+|..-+..+ .-+++..+-.+++||+.||.|+|
T Consensus 87 lvFe----------~m~G~dl~~eIV~R-----------------------------~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 87 LVFD----------LVTGGELFEDIVAR-----------------------------EFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred EEEe----------cccchHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 55555554433221 11356778899999999999999
Q ss_pred HCCCcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
.+||||||+||+|+|+.. +...-+||+|||+|..+..+.... .
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~------------------------------------G 171 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWH------------------------------------G 171 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccc------------------------------------c
Confidence 999999999999999963 334468999999999887322111 1
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH-hhcccc---cccCCCHHHHHHHHHcc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV-KDRKDL---FLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~-~~~~~~---~~~~~~~e~~dLI~~~L 778 (934)
.+|||+|||||++...+|+..+|||+.|||||-|+.|..|++++...+....+ +...+. .+...++++++||++||
T Consensus 172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML 251 (355)
T KOG0033|consen 172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRML 251 (355)
T ss_pred ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHh
Confidence 57999999999999999999999999999999999975555565666665444 333333 33456799999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCccc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
..||++|.|+.|.|+|||+.+.+.
T Consensus 252 ~~dP~kRIta~EAL~HpWi~~r~~ 275 (355)
T KOG0033|consen 252 TVNPKKRITADEALKHPWICNRER 275 (355)
T ss_pred ccChhhhccHHHHhCCchhcchHH
Confidence 999999999999999999976554
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=373.80 Aligned_cols=262 Identities=29% Similarity=0.404 Sum_probs=201.8
Q ss_pred cCceeecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----------------hhHHHHHHHHHHHhCCCC
Q 002343 466 VDGRRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----------------HDVALKEIQNLIASDQHP 527 (934)
Q Consensus 466 ~~~~~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----------------~~~~~~Ei~~ll~~l~Hp 527 (934)
..++..-+.|.+.+.||+|.||.|-++. ..+++.||||++.+.. .+...+||. +++.++||
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIa-ilKkl~H~ 168 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIA-ILKKLHHP 168 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHH-HHHhcCCc
Confidence 3456677889999999999999999984 5679999999997542 135667886 88999999
Q ss_pred ceeEEEEEEecC--CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCC-CC
Q 002343 528 NIVRWYGVESDQ--DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANG-HP 604 (934)
Q Consensus 528 NIV~l~g~~~~~--~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 604 (934)
|||+|+++..+. +.+|||+|||..+ .+.. .. .... +.
T Consensus 169 nVV~LiEvLDDP~s~~~YlVley~s~G----------~v~w-~p-----------------------------~d~~els 208 (576)
T KOG0585|consen 169 NVVKLIEVLDDPESDKLYLVLEYCSKG----------EVKW-CP-----------------------------PDKPELS 208 (576)
T ss_pred CeeEEEEeecCcccCceEEEEEeccCC----------cccc-CC-----------------------------CCccccc
Confidence 999999999874 5799999987642 1110 00 0122 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHh
Q 002343 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILL 684 (934)
Q Consensus 605 ~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (934)
+.++++|+++++.||+|||.+|||||||||+|+||+.++ ++||+|||.|......... +.+.+
T Consensus 209 ~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g--~VKIsDFGVs~~~~~~~~~------~~d~~--------- 271 (576)
T KOG0585|consen 209 EQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG--TVKISDFGVSNEFPQGSDE------GSDDQ--------- 271 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC--cEEeeccceeeecccCCcc------ccHHH---------
Confidence 889999999999999999999999999999999998776 4999999999876443111 00000
Q ss_pred hhhhhccccccccceeecCCCCCccccchhcccCC---C-cccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccc
Q 002343 685 KLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR---Q-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKD 760 (934)
Q Consensus 685 ~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~---~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~ 760 (934)
....+|||.|||||.+.++. + +.+.||||+||+||.|+.|..|++++........+...+-
T Consensus 272 ---------------L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL 336 (576)
T KOG0585|consen 272 ---------------LSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPL 336 (576)
T ss_pred ---------------HhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcc
Confidence 11157999999999998733 3 7899999999999999997555555544444444544444
Q ss_pred cccc--CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 761 LFLV--EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 761 ~~~~--~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.++. +..++++|||.+||++||++|.+..+|..|||....
T Consensus 337 ~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 337 EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 3433 246899999999999999999999999999998544
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=376.10 Aligned_cols=248 Identities=25% Similarity=0.366 Sum_probs=195.4
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+|+.||||++.+... ....+|+. ++..++||||+++++++.+.+.+|+|||||.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~- 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESR-VLQNTRHPFLTALKYSFQTHDRLCFVMEYAN- 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHH-HHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC-
Confidence 4699999999999854 5789999999875321 22345554 7788999999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++.. ...+++.+++.++.||+.||+|||++||+|||
T Consensus 79 ---------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 79 ---------GGELFFHLSR-----------------------------ERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 4444444321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+|+........ ....+||+.|+|
T Consensus 121 lkp~NIll~~~~~--~kl~DfG~a~~~~~~~~~-----------------------------------~~~~~gt~~y~a 163 (323)
T cd05571 121 LKLENLMLDKDGH--IKITDFGLCKEGISDGAT-----------------------------------MKTFCGTPEYLA 163 (323)
T ss_pred CCHHHEEECCCCC--EEEeeCCCCcccccCCCc-----------------------------------ccceecCccccC
Confidence 9999999976654 999999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc----
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP---- 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP---- 786 (934)
||++.+..++.++|||||||++|||++| .+||. .........+.......+...++++.+||.+||+.||++||
T Consensus 164 PE~~~~~~~~~~~DiwSlG~il~elltg-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 242 (323)
T cd05571 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGP 242 (323)
T ss_pred hhhhcCCCCCccccCcccchhhhhhhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCC
Confidence 9999999999999999999999999997 55554 44444444444344444556788999999999999999999
Q ss_pred -CHHHHHcCCCCCCccchh
Q 002343 787 -KAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 787 -Ta~evL~HPff~~~~~~~ 804 (934)
++.++++||||...++..
T Consensus 243 ~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 243 EDAKEIMEHRFFASINWQD 261 (323)
T ss_pred CCHHHHHcCCCcCCCCHHH
Confidence 899999999998766543
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=387.47 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=208.5
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHh-CCCCceeEEEEEEecCCeE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIAS-DQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~-l~HpNIV~l~g~~~~~~~~ 542 (934)
--+.|.+.++||+|+||+|+++. ..+++.+|||+++|... +....|-. ++.. -+||.+++++++|++.+++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~Ekr-I~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKR-IFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHH-HHHHhccCCeEeecccccccCCeE
Confidence 34679999999999999999984 45688999999987542 22233333 3332 2799999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+||||+.|+ ++..+. ....+++..++-|+..|+.||+||
T Consensus 445 ~fvmey~~Gg----------dm~~~~------------------------------~~~~F~e~rarfyaAev~l~L~fL 484 (694)
T KOG0694|consen 445 FFVMEYVAGG----------DLMHHI------------------------------HTDVFSEPRARFYAAEVVLGLQFL 484 (694)
T ss_pred EEEEEecCCC----------cEEEEE------------------------------ecccccHHHHHHHHHHHHHHHHHH
Confidence 9999966553 321111 135578888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||+||||.+||||+.+|. +||+||||||....... . .++
T Consensus 485 H~~~IIYRDlKLdNiLLD~eGh--~kiADFGlcKe~m~~g~---~--------------------------------TsT 527 (694)
T KOG0694|consen 485 HENGIIYRDLKLDNLLLDTEGH--VKIADFGLCKEGMGQGD---R--------------------------------TST 527 (694)
T ss_pred HhcCceeeecchhheEEcccCc--EEecccccccccCCCCC---c--------------------------------ccc
Confidence 9999999999999999988776 99999999996542211 1 123
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||||.|||||++.+..|+.++|+|||||+|||||.| .+||. +..+.....+......++...+.|+.++++++|..+
T Consensus 528 fCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G-q~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~ 606 (694)
T KOG0694|consen 528 FCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG-ESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKN 606 (694)
T ss_pred ccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccC
Confidence 8999999999999999999999999999999999996 66665 666666677777778888889999999999999999
Q ss_pred CCCCcC-----HHHHHcCCCCCCccchhh
Q 002343 782 PDLRPK-----AQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 782 P~~RPT-----a~evL~HPff~~~~~~~~ 805 (934)
|++|.. +++|.+||||+..++..-
T Consensus 607 p~kRLG~~e~d~~~i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 607 PEKRLGSGERDAEDIKKHPFFRSIDWDDL 635 (694)
T ss_pred cccccCCCCCCchhhhhCCccccCCHHHH
Confidence 999986 578999999998887543
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-41 Score=375.15 Aligned_cols=250 Identities=25% Similarity=0.340 Sum_probs=197.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+.. .+...+|+. ++..++||||+++++++.+++..|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKS-ILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHH-HHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 4578889999999999999855 468999999986532 123445654 77889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++..+..++.||+.||+|||++
T Consensus 97 ~e~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 137 (329)
T PTZ00263 97 LEFVV----------GGELFTHLRK-----------------------------AGRFPNDVAKFYHAELVLAFEYLHSK 137 (329)
T ss_pred EcCCC----------CChHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99665 3444444321 23467788889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+++....... ..+|
T Consensus 138 ~ivH~dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~--------------------------------------~~~g 177 (329)
T PTZ00263 138 DIIYRDLKPENLLLDNKGH--VKVTDFGFAKKVPDRTF--------------------------------------TLCG 177 (329)
T ss_pred CeeecCCCHHHEEECCCCC--EEEeeccCceEcCCCcc--------------------------------------eecC
Confidence 9999999999999976654 99999999986543210 1468
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|+|++| .+||.. ........+.......+...+.++++||.+||+.||.+
T Consensus 178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~ 256 (329)
T PTZ00263 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG-YPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTK 256 (329)
T ss_pred ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcC-CCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 9999999999999999999999999999999996 556644 33333333333333334446789999999999999999
Q ss_pred CcC-----HHHHHcCCCCCCccch
Q 002343 785 RPK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 785 RPT-----a~evL~HPff~~~~~~ 803 (934)
||+ ++++++||||.+.++.
T Consensus 257 R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 257 RLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred cCCCCCCCHHHHhcCCccCCCCHH
Confidence 997 7999999999876554
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=368.98 Aligned_cols=254 Identities=24% Similarity=0.336 Sum_probs=194.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++.+++..|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREAS-LLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHH-HHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 4588889999999999999855 4789999999864322 24456665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.++|.+++... ...+++..++.++.||+.||+|||++||
T Consensus 84 ~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~al~~lH~~~i 124 (303)
T cd07869 84 YVHTDLCQYMDKH---------------------------------------PGGLHPENVKLFLFQLLRGLSYIHQRYI 124 (303)
T ss_pred CCCcCHHHHHHhC---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8887766554211 2345777889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+++........ .....||+
T Consensus 125 vH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~~~~ 167 (303)
T cd07869 125 LHRDLKPQNLLISDTGE--LKLADFGLARAKSVPSHT-----------------------------------YSNEVVTL 167 (303)
T ss_pred ecCCCCHHHEEECCCCC--EEECCCCcceeccCCCcc-----------------------------------CCCCcccC
Confidence 99999999999976654 999999999754322110 01145899
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH--HH-HHHh--hcc------------cc--------
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER--DA-NIVK--DRK------------DL-------- 761 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~-~i~~--~~~------------~~-------- 761 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||...... .. .+.. ... ..
T Consensus 168 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (303)
T cd07869 168 WYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQG-VAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLY 246 (303)
T ss_pred CCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccccccc
Confidence 99999998764 578999999999999999996 6777643211 11 1110 000 00
Q ss_pred ---------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchh
Q 002343 762 ---------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 762 ---------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~ 804 (934)
.....++++.+||.+||+.||++|||+.|+++||||.+...++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~~ 298 (303)
T cd07869 247 SPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPRL 298 (303)
T ss_pred CCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChhh
Confidence 0001236789999999999999999999999999998766544
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=373.65 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=197.5
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yL 544 (934)
..|...++||+|+||.||++ +..+|+.||+|++.-.. ...+.|||. ++++++|||||+|.+...+. ..+||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~-ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIK-ILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHH-HHHhcCCCcccceeeEEEecCCceEEE
Confidence 34556778999999999998 55779999999986543 245789997 88999999999999988776 78999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|+||++.+|.-++..+ .-.+++.+++.+|+||+.||+|||+
T Consensus 196 VFeYMdhDL~GLl~~p---------------------------------------~vkft~~qIKc~mkQLl~Gl~~cH~ 236 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSP---------------------------------------GVKFTEPQIKCYMKQLLEGLEYCHS 236 (560)
T ss_pred EEecccchhhhhhcCC---------------------------------------CcccChHHHHHHHHHHHHHHHHHhh
Confidence 9998887666554211 2246889999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+|||||.+||||+.++ .+||+|||||+.+....... +|..+
T Consensus 237 ~gvlHRDIK~SNiLidn~G--~LKiaDFGLAr~y~~~~~~~----------------------------------~T~rV 280 (560)
T KOG0600|consen 237 RGVLHRDIKGSNILIDNNG--VLKIADFGLARFYTPSGSAP----------------------------------YTSRV 280 (560)
T ss_pred cCeeeccccccceEEcCCC--CEEeccccceeeccCCCCcc----------------------------------cccce
Confidence 9999999999999996665 49999999999876644321 23356
Q ss_pred CCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHh---------hc-cccc---------
Q 002343 705 GSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVK---------DR-KDLF--------- 762 (934)
Q Consensus 705 GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~---------~~-~~~~--------- 762 (934)
-|..|+|||.+++. .|+.++|+||.||||.||++| ++.|....+ .+. .|.+ |. ..+.
T Consensus 281 vTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g-kPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~ 359 (560)
T KOG0600|consen 281 VTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG-KPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQ 359 (560)
T ss_pred EEeeccChHHhcCCcccccceeehhhhHHHHHHHcC-CCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCC
Confidence 79999999999985 689999999999999999996 666654332 222 2211 00 0000
Q ss_pred ---------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 763 ---------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 763 ---------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
....++.+.+|+..||..||.+|.||.++|+|+||+..
T Consensus 360 ~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 360 PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 11234678999999999999999999999999999543
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=363.40 Aligned_cols=254 Identities=28% Similarity=0.445 Sum_probs=198.7
Q ss_pred eecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEec-----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD----- 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----- 538 (934)
.+...|...+.||+|+||.|..+ ...+|+.||||++.... ....+||++ +++.++|+|||.+++++..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElk-lLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELK-LLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHH-HHHHhcCCCcceEEeecccccccc
Confidence 45667777789999999999987 55779999999987433 256789997 8888999999999999876
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
-+.+|+|+|+++.+|...+.. ...++...+..+++||++|
T Consensus 98 f~DvYiV~elMetDL~~iik~----------------------------------------~~~L~d~H~q~f~YQiLrg 137 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKS----------------------------------------QQDLTDDHAQYFLYQILRG 137 (359)
T ss_pred cceeEEehhHHhhHHHHHHHc----------------------------------------CccccHHHHHHHHHHHHHh
Confidence 346999999887766665521 2236778899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|+|+.||+||||||.|+|++.+.. +||+|||+|+..... .. ..
T Consensus 138 LKyiHSAnViHRDLKPsNll~n~~c~--lKI~DFGLAR~~~~~-~~--------------------------------~~ 182 (359)
T KOG0660|consen 138 LKYIHSANVIHRDLKPSNLLLNADCD--LKICDFGLARYLDKF-FE--------------------------------DG 182 (359)
T ss_pred cchhhcccccccccchhheeeccCCC--EEeccccceeecccc-Cc--------------------------------cc
Confidence 99999999999999999999976654 799999999987654 10 01
Q ss_pred eeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH----------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV---------------------- 755 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~---------------------- 755 (934)
++|..+.|..|.|||++.. ..||.++||||+||||.||++|+..+-|...-.+.+.+
T Consensus 183 ~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~ 262 (359)
T KOG0660|consen 183 FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARP 262 (359)
T ss_pred chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHH
Confidence 2345678999999998864 57999999999999999999985555454332222111
Q ss_pred --hhcccc-------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 756 --KDRKDL-------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 756 --~~~~~~-------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
+..+.. ..+..++++.||+.+||..||.+|+|++|+|+|||+..
T Consensus 263 yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 263 YIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 111111 12345689999999999999999999999999999843
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=364.63 Aligned_cols=246 Identities=24% Similarity=0.358 Sum_probs=189.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||+||++.. .+++.||+|++.... .....+|+. +++.++||||+++++++.+++..|+|||+
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVS-LLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHH-HHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 478889999999999999854 568999999986432 234567776 77889999999999999999999999998
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++... ...+++.+++.++.||+.||+|||++||+
T Consensus 85 ~~~~l~~~l~~~---------------------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 125 (288)
T cd07871 85 LDSDLKQYLDNC---------------------------------------GNLMSMHNVKIFMFQLLRGLSYCHKRKIL 125 (288)
T ss_pred CCcCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 887766554210 12356778899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+++......... ....||+.
T Consensus 126 H~dlkp~Nil~~~~~~--~kl~DfG~~~~~~~~~~~~-----------------------------------~~~~~~~~ 168 (288)
T cd07871 126 HRDLKPQNLLINEKGE--LKLADFGLARAKSVPTKTY-----------------------------------SNEVVTLW 168 (288)
T ss_pred cCCCCHHHEEECCCCC--EEECcCcceeeccCCCccc-----------------------------------cCceeccc
Confidence 9999999999976654 9999999997653321110 11358999
Q ss_pred cccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHH-hhc------------------cccc-----
Q 002343 709 WQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIV-KDR------------------KDLF----- 762 (934)
Q Consensus 709 Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~-~~~------------------~~~~----- 762 (934)
|+|||++.+ ..++.++|||||||++|+|++| .+||.... ......+ ... ....
T Consensus 169 y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07871 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATG-RPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRA 247 (288)
T ss_pred ccChHHhcCCcccCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCC
Confidence 999999876 4689999999999999999996 66664432 2211111 000 0000
Q ss_pred ------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 763 ------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 763 ------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
....+++++|||.+||+.||.+|||++|+|+||||
T Consensus 248 ~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 248 QPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 11235789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=374.05 Aligned_cols=241 Identities=29% Similarity=0.460 Sum_probs=193.3
Q ss_pred EeeeecccCcEEEEEEEEecCcE-EEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEEEecc
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRS-VAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLERC 549 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~-VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-~~yLVmE~c 549 (934)
+.+.||+|+||+||+ +.+.|+. ||||++..... +...+|+. ++..++|||||+++|++.+.. .++||||
T Consensus 45 ~~~~iG~G~~g~V~~-~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~-il~~l~HpNIV~f~G~~~~~~~~~~iVtE-- 120 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYK-GKWRGTDVVAVKIISDPDFDDESRKAFRREAS-LLSRLRHPNIVQFYGACTSPPGSLCIVTE-- 120 (362)
T ss_pred hhhhcccCCceeEEE-EEeCCceeEEEEEecchhcChHHHHHHHHHHH-HHHhCCCCCeeeEEEEEcCCCCceEEEEE--
Confidence 345699999999997 6677777 99999976442 24455554 888899999999999999988 7999999
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC-Cc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG-LI 628 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g-IV 628 (934)
|+++|+|.++|+.. ....++...+++++.||++||.|||+++ ||
T Consensus 121 --------y~~~GsL~~~l~~~---------------------------~~~~l~~~~~l~~aldiArGm~YLH~~~~iI 165 (362)
T KOG0192|consen 121 --------YMPGGSLSVLLHKK---------------------------RKRKLPLKVRLRIALDIARGMEYLHSEGPII 165 (362)
T ss_pred --------eCCCCcHHHHHhhc---------------------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 77888888887642 1356788899999999999999999999 99
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.+. .++||+|||+++........ .+...||+.
T Consensus 166 HrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~~~-----------------------------------~~~~~GT~~ 209 (362)
T KOG0192|consen 166 HRDLKSDNILVDLKG-KTLKIADFGLSREKVISKTS-----------------------------------MTSVAGTYR 209 (362)
T ss_pred ecccChhhEEEcCCC-CEEEECCCccceeecccccc-----------------------------------ccCCCCCcc
Confidence 999999999996554 36999999999876542100 111469999
Q ss_pred cccchhcc--cCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHH-HhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 709 WQAPEQLL--QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANI-VKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 709 Y~APE~l~--~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i-~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|||||++. ...|+.|+||||||++||||+|| ..||.+..... ..+ .....+..+....+.+..|+.+||..||+
T Consensus 210 wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~-~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~ 288 (362)
T KOG0192|consen 210 WMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG-EIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPS 288 (362)
T ss_pred ccChhhhcCCCCcCCccchhhhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCC
Confidence 99999999 66899999999999999999996 77887654322 122 23334444555778999999999999999
Q ss_pred CCcCHHHHHc
Q 002343 784 LRPKAQNVLN 793 (934)
Q Consensus 784 ~RPTa~evL~ 793 (934)
+||++.+++.
T Consensus 289 ~RP~f~ei~~ 298 (362)
T KOG0192|consen 289 RRPSFLEIVS 298 (362)
T ss_pred cCCCHHHHHH
Confidence 9999999864
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=367.94 Aligned_cols=248 Identities=26% Similarity=0.348 Sum_probs=195.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKR-VLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHH-HHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 467789999999999999855 4689999999864321 22344554 788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 81 e~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ 121 (291)
T cd05612 81 EYVP----------GGELFSYLRN-----------------------------SGRFSNSTGLFYASEIVCALEYLHSKE 121 (291)
T ss_pred eCCC----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9554 4455444432 234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++.+..... ..+||
T Consensus 122 i~H~dlkp~NIli~~~~--~~kl~Dfg~~~~~~~~~~--------------------------------------~~~gt 161 (291)
T cd05612 122 IVYRDLKPENILLDKEG--HIKLTDFGFAKKLRDRTW--------------------------------------TLCGT 161 (291)
T ss_pred eeecCCCHHHeEECCCC--CEEEEecCcchhccCCcc--------------------------------------cccCC
Confidence 99999999999997665 499999999986543110 14589
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+.|+|||++.+..++.++|||||||++|+|++| ..||... .......+.......+...++++++||.+||+.||.+|
T Consensus 162 ~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 240 (291)
T cd05612 162 PEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG-YPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRR 240 (291)
T ss_pred hhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHc
Confidence 999999999998999999999999999999997 5566543 33333333333333444567899999999999999999
Q ss_pred cC-----HHHHHcCCCCCCccc
Q 002343 786 PK-----AQNVLNHPFFWTADT 802 (934)
Q Consensus 786 PT-----a~evL~HPff~~~~~ 802 (934)
|+ ++++++||||...++
T Consensus 241 ~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 241 LGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred cCCccCCHHHHhcCccccCCCH
Confidence 95 999999999976554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=361.50 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=195.4
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|...+.||+|+||+||++. ..+|+.||||.+.+... ....+|+. ++..++|+||+++++++.+++..|+|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKR-ILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHH-HHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 5667899999999999985 46799999999864321 12344554 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+ |+|..++... ...++++.+++.++.||+.||+|||+++|
T Consensus 81 ~~~~----------g~L~~~~~~~---------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05631 81 IMNG----------GDLKFHIYNM---------------------------GNPGFDEQRAIFYAAELCCGLEDLQRERI 123 (285)
T ss_pred ecCC----------CcHHHHHHhh---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 6653 3443332210 12346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++........ ....||.
T Consensus 124 iH~dikp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~------------------------------------~~~~g~~ 165 (285)
T cd05631 124 VYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETV------------------------------------RGRVGTV 165 (285)
T ss_pred EeCCCCHHHEEECCCC--CEEEeeCCCcEEcCCCCee------------------------------------cCCCCCC
Confidence 9999999999997655 4999999999875432110 1146899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-----HHHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-----DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-----~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+..++.++|||||||++|||++| .+||...... ....+.......+...++++.+||.+||+.||
T Consensus 166 ~y~aPE~~~~~~~~~~~DvwslGvil~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P 244 (285)
T cd05631 166 GYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG-QSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNP 244 (285)
T ss_pred CccCHhhhcCCCCCcccCchhHHHHHHHHHhC-CCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCH
Confidence 99999999999999999999999999999996 7777643221 11222222233344567899999999999999
Q ss_pred CCCcC-----HHHHHcCCCCCCccch
Q 002343 783 DLRPK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 783 ~~RPT-----a~evL~HPff~~~~~~ 803 (934)
++||+ ++++++||||...+++
T Consensus 245 ~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 245 KERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred HHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 99997 8999999999776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=370.70 Aligned_cols=250 Identities=27% Similarity=0.355 Sum_probs=196.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEec--CcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE--GRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~--g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++.... +..||||++.+.. .+...+|+. +++.++|||||++++++.+.+..|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERK-ILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHH-HHHhCCCCCCcceEEEEEeCCEEEE
Confidence 457788999999999999985433 3689999986432 123345554 8888999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||. +|+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 109 v~Ey~~----------~g~L~~~i~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~ 149 (340)
T PTZ00426 109 VLEFVI----------GGEFFTFLRR-----------------------------NKRFPNDVGCFYAAQIVLIFEYLQS 149 (340)
T ss_pred EEeCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999664 3444444321 2346788889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++.+..... ..+
T Consensus 150 ~~ivHrDLkp~NILl~~~~--~ikL~DFG~a~~~~~~~~--------------------------------------~~~ 189 (340)
T PTZ00426 150 LNIVYRDLKPENLLLDKDG--FIKMTDFGFAKVVDTRTY--------------------------------------TLC 189 (340)
T ss_pred CCeEccCCCHHHEEECCCC--CEEEecCCCCeecCCCcc--------------------------------------eec
Confidence 9999999999999997665 499999999986532110 146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|||||++.+..++.++|||||||++|||++| .+||... .......+.......+...++++.++|++||+.||+
T Consensus 190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~ 268 (340)
T PTZ00426 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG-CPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLT 268 (340)
T ss_pred CChhhcCHHHHhCCCCCccccccchhhHHHHHhcC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHH
Confidence 99999999999998899999999999999999996 5666543 323333333333344555678999999999999999
Q ss_pred CCc-----CHHHHHcCCCCCCccch
Q 002343 784 LRP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 784 ~RP-----Ta~evL~HPff~~~~~~ 803 (934)
+|+ +++++++||||.+.++.
T Consensus 269 ~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 269 KRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred HcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 995 89999999999876543
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=358.86 Aligned_cols=259 Identities=29% Similarity=0.412 Sum_probs=198.7
Q ss_pred cCceeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecC--C--
Q 002343 466 VDGRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQ--D-- 540 (934)
Q Consensus 466 ~~~~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~-- 540 (934)
.+++...-.|...+++|.|+||.||.+... +++.||||+...... ..-+|.+ +|..++|||||++.-+|... .
T Consensus 17 ~~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~-im~~l~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 17 NDGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQ-IMRKLDHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred CCCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHH-HHHhcCCcCeeeEEEEEEecCCCch
Confidence 344556667888899999999999998554 478999999865432 4456776 66799999999998887642 2
Q ss_pred -eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 -~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
++.+||||++.+|.+.+.. +.+ ....+|.-.++-++.||++||
T Consensus 95 ~~lnlVleymP~tL~~~~r~-------~~~-----------------------------~~~~mp~~~iKLYt~Qlfrgl 138 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRH-------YTR-----------------------------ANQRMPLLEIKLYTYQLFRGL 138 (364)
T ss_pred hHHHHHHHhchHHHHHHHHH-------Hhh-----------------------------cCCCCceeeeHHHHHHHHHHH
Confidence 4668999888877766621 000 134566778899999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||+.||+||||||+|||++.+. ..+||||||.|+.+..+....+
T Consensus 139 ~yLh~~~IcHRDIKPqNlLvD~~t-g~LKicDFGSAK~L~~~epniS--------------------------------- 184 (364)
T KOG0658|consen 139 AYLHSHGICHRDIKPQNLLVDPDT-GVLKICDFGSAKVLVKGEPNIS--------------------------------- 184 (364)
T ss_pred HHHHhcCcccCCCChheEEEcCCC-CeEEeccCCcceeeccCCCcee---------------------------------
Confidence 999999999999999999998764 4699999999999887654322
Q ss_pred eecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhh------------cc------
Q 002343 700 FTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKD------------RK------ 759 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~------------~~------ 759 (934)
..-|..|+|||.+.+. .||.+.||||.|||+.||+-|+..+-|+....+. .+++- ..
T Consensus 185 ---YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~ 261 (364)
T KOG0658|consen 185 ---YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFK 261 (364)
T ss_pred ---EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccccc
Confidence 3358899999999875 5899999999999999999986555555433222 11110 00
Q ss_pred ----------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 760 ----------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 760 ----------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
........+++.||+.++|..+|.+|.++.|+|.||||..
T Consensus 262 ~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 262 FPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred CcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 0122334689999999999999999999999999999943
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=365.32 Aligned_cols=244 Identities=28% Similarity=0.355 Sum_probs=190.9
Q ss_pred ecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||+|+||+||++.. .+++.||+|++.+... ....+|+. ++..++||||+++++++.+.+..|+|||||.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--- 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERT-VLAQVNCPFIVPLKFSFQSPEKLYLVLAFIN--- 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCcEeceeeEEecCCeEEEEEcCCC---
Confidence 79999999999855 4688999999864321 22345554 7788899999999999999999999999654
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|.+++.. ...+++..++.++.||+.||+|||++||+|||||
T Consensus 77 -------~g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 77 -------GGELFHHLQR-----------------------------EGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 4555544432 2346778889999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++ .+||+|||+++........ ....+||+.|+|||
T Consensus 121 p~Nili~~~~--~~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~aPE 163 (312)
T cd05585 121 PENILLDYQG--HIALCDFGLCKLNMKDDDK-----------------------------------TNTFCGTPEYLAPE 163 (312)
T ss_pred HHHeEECCCC--cEEEEECcccccCccCCCc-----------------------------------cccccCCcccCCHH
Confidence 9999997665 4999999999754322110 01146999999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc---CHH
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP---KAQ 789 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP---Ta~ 789 (934)
++.+..++.++|||||||++|||++| .+||.. ........+.......+...++++.+||.+||+.||++|| ++.
T Consensus 164 ~~~~~~~~~~~DvwslGvil~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~ 242 (312)
T cd05585 164 LLLGHGYTKAVDWWTLGVLLYEMLTG-LPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQ 242 (312)
T ss_pred HHcCCCCCCccceechhHHHHHHHhC-CCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHH
Confidence 99999999999999999999999996 666654 3333333333333444556778999999999999999997 589
Q ss_pred HHHcCCCCCCccc
Q 002343 790 NVLNHPFFWTADT 802 (934)
Q Consensus 790 evL~HPff~~~~~ 802 (934)
++++||||...+.
T Consensus 243 e~l~hp~~~~~~~ 255 (312)
T cd05585 243 EIKNHPFFSQLSW 255 (312)
T ss_pred HHHcCCCcCCCCH
Confidence 9999999976543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=368.84 Aligned_cols=247 Identities=25% Similarity=0.351 Sum_probs=194.2
Q ss_pred eeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++. ..+|+.||||++.+... ....+|+. +++.++||||+++++++.+++..|+|||||.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~- 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESR-VLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN- 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCCCcceEEEEEcCCEEEEEEeCCC-
Confidence 469999999999984 45789999999975321 23345554 7888999999999999999999999999655
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++.+++.++.||+.||+|||++||+|||
T Consensus 79 ---------~g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 79 ---------GGELFFHLSR-----------------------------ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred ---------CCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 4444444321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 121 ikp~NIll~~~~--~~kL~DfG~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 163 (328)
T cd05593 121 LKLENLMLDKDG--HIKITDFGLCKEGITDAAT-----------------------------------MKTFCGTPEYLA 163 (328)
T ss_pred cCHHHeEECCCC--cEEEecCcCCccCCCcccc-----------------------------------cccccCCcCccC
Confidence 999999997665 4999999998753321110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc----
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP---- 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP---- 786 (934)
||++.+..++.++|||||||++|+|++| .+||.. ........+.......+...++++.+||.+||+.||++|+
T Consensus 164 PE~~~~~~~~~~~DiwslGvil~elltG-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 242 (328)
T cd05593 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGP 242 (328)
T ss_pred hhhhcCCCCCccCCccccchHHHHHhhC-CCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 9999999999999999999999999996 566644 3333333333333344556778999999999999999997
Q ss_pred -CHHHHHcCCCCCCccch
Q 002343 787 -KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 -Ta~evL~HPff~~~~~~ 803 (934)
++.++++||||...++.
T Consensus 243 ~~~~~il~h~~~~~~~~~ 260 (328)
T cd05593 243 DDAKEIMRHSFFTGVNWQ 260 (328)
T ss_pred CCHHHHhcCCCcCCCCHH
Confidence 89999999999776554
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=354.93 Aligned_cols=255 Identities=30% Similarity=0.461 Sum_probs=198.9
Q ss_pred EeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCc-eeEEEEEEecCC------eEE
Q 002343 477 FNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPN-IVRWYGVESDQD------FVY 543 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpN-IV~l~g~~~~~~------~~y 543 (934)
..++||+|+||+||+| ...+|+.||+|++.-... ..+.+|+. +++.++|+| ||++++++.+.+ .+|
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREis-llk~L~~~~~iv~L~dv~~~~~~~~~~~~l~ 93 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREIS-LLKRLSHANHIVRLHDVIHTSNNHRGIGKLY 93 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHH-HHHHhCCCcceEEEEeeeeecccccccceEE
Confidence 3456999999999998 456799999999865433 46789997 889999999 999999999877 899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|+|+++.+|..++..... ...+++...++.+++||+.||+|||
T Consensus 94 lvfe~~d~DL~~ymd~~~~------------------------------------~~~g~~~~~ik~~m~Qll~gl~~~H 137 (323)
T KOG0594|consen 94 LVFEFLDRDLKKYMDSLPK------------------------------------KPQGLPPRLIKSFMRQLLRGLAFLH 137 (323)
T ss_pred EEEEeecccHHHHHHhccc------------------------------------cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877732110 0145677889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++|+||||||+||||++++. +||+|||+|+...-.... ++..
T Consensus 138 ~~~IlHRDLKPQNlLi~~~G~--lKlaDFGlAra~~ip~~~-----------------------------------yt~e 180 (323)
T KOG0594|consen 138 SHGILHRDLKPQNLLISSSGV--LKLADFGLARAFSIPMRT-----------------------------------YTPE 180 (323)
T ss_pred hCCeecccCCcceEEECCCCc--EeeeccchHHHhcCCccc-----------------------------------cccc
Confidence 999999999999999987665 899999999965432221 2235
Q ss_pred CCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhh--c---------------ccccc-
Q 002343 704 YGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKD--R---------------KDLFL- 763 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~--~---------------~~~~~- 763 (934)
++|..|+|||++.+. .|+..+||||+|||++||+++..++-++...++. .+..- . ...++
T Consensus 181 vvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~ 260 (323)
T KOG0594|consen 181 VVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPK 260 (323)
T ss_pred EEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcC
Confidence 689999999999987 6899999999999999999975555555433222 22110 0 00000
Q ss_pred -----------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhh
Q 002343 764 -----------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 764 -----------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~ 805 (934)
+...+++.||+.+||+.+|++|.||..+|.||||...+.+..
T Consensus 261 ~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 261 WPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred CCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 111257899999999999999999999999999977655443
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=376.94 Aligned_cols=253 Identities=29% Similarity=0.330 Sum_probs=200.0
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC--hhHHHHHHHHHHHhCC-C-----CceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQ-H-----PNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~-H-----pNIV~l~g~~~~~ 539 (934)
..++.+|.+.+.||+|+||.|.++ +..+++.||||++++.. ..++..|+. +++.++ | -|||+++++|...
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~-iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIR-ILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHH-HHHHHhccCCCCCeeEEEeeeccccc
Confidence 345568999999999999999998 66779999999997543 356677776 555554 3 5899999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+++|||+|+...+|.+++... +..|++...++.|++||+.||
T Consensus 261 ~HlciVfELL~~NLYellK~n--------------------------------------~f~Glsl~~ir~~~~Qil~~L 302 (586)
T KOG0667|consen 261 NHLCIVFELLSTNLYELLKNN--------------------------------------KFRGLSLPLVRKFAQQILTAL 302 (586)
T ss_pred cceeeeehhhhhhHHHHHHhc--------------------------------------CCCCCCHHHHHHHHHHHHHHH
Confidence 999999999888888777431 246789999999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
.+||+.+|||+|||||||||..-+...+||+|||.|........
T Consensus 303 ~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy------------------------------------ 346 (586)
T KOG0667|consen 303 LFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY------------------------------------ 346 (586)
T ss_pred HHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce------------------------------------
Confidence 99999999999999999999876666899999999987544321
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCC-CCchhH-HHHHHhh--------------------
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFER-DANIVKD-------------------- 757 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf-~~~~~~-~~~i~~~-------------------- 757 (934)
+.+-+..|+|||++.+.+|+.+.||||||||++||++| .|-| |+.... ...|+.-
T Consensus 347 --tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~ 423 (586)
T KOG0667|consen 347 --TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT 423 (586)
T ss_pred --eeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence 14578899999999999999999999999999999997 4444 332211 1111100
Q ss_pred -------------------------------cccccc-c----------CCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 758 -------------------------------RKDLFL-V----------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 758 -------------------------------~~~~~~-~----------~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
.....+ . .....+.|||.+||.+||.+|+|+.++|+||
T Consensus 424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp 503 (586)
T KOG0667|consen 424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP 503 (586)
T ss_pred ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence 000000 0 0113678999999999999999999999999
Q ss_pred CCCC
Q 002343 796 FFWT 799 (934)
Q Consensus 796 ff~~ 799 (934)
||..
T Consensus 504 fl~~ 507 (586)
T KOG0667|consen 504 FLTG 507 (586)
T ss_pred cccc
Confidence 9974
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=367.80 Aligned_cols=247 Identities=26% Similarity=0.376 Sum_probs=193.7
Q ss_pred eeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++. ..+|+.||+|++.+... ....+|+. +++.++||||+++++++.+.+..|||||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~- 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR-VLQNTRHPFLTALKYAFQTHDRLCFVMEYAN- 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHH-HHHhCCCCCCcceeeEEecCCEEEEEEeCCC-
Confidence 469999999999984 45789999999875321 12334554 7888999999999999999999999999654
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++.+++.++.||+.||+|||++||+|||
T Consensus 79 ---------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 79 ---------GGELFFHLSR-----------------------------ERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 4455444321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++......... ....||+.|+|
T Consensus 121 lkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~-----------------------------------~~~~gt~~y~a 163 (323)
T cd05595 121 IKLENLMLDKDG--HIKITDFGLCKEGISDGATM-----------------------------------KTFCGTPEYLA 163 (323)
T ss_pred CCHHHEEEcCCC--CEEecccHHhccccCCCCcc-----------------------------------ccccCCcCcCC
Confidence 999999997665 49999999987532211100 11469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc----
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP---- 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP---- 786 (934)
||++.+..++.++|||||||++|||++| ..||.. ........+.......+...++++.+||.+||+.||++||
T Consensus 164 PE~~~~~~~~~~~DiwSlGvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~ 242 (323)
T cd05595 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGP 242 (323)
T ss_pred cccccCCCCCchhchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCC
Confidence 9999999999999999999999999996 556644 3333333333333334556788999999999999999998
Q ss_pred -CHHHHHcCCCCCCccch
Q 002343 787 -KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 -Ta~evL~HPff~~~~~~ 803 (934)
++.++++||||...++.
T Consensus 243 ~~~~~~l~h~~~~~~~~~ 260 (323)
T cd05595 243 SDAKEVMEHRFFLSINWQ 260 (323)
T ss_pred CCHHHHHcCCCcCCCCHH
Confidence 89999999999876654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=370.43 Aligned_cols=254 Identities=27% Similarity=0.427 Sum_probs=203.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCC-CCceeEEEEEEecCC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQ-HPNIVRWYGVESDQD 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~ 540 (934)
..+...|.+.++||+|.||.||++.. .+|+.+|+|.+.+... +...+|++ +|+.+. |||||.+++++++.+
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~-il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVA-ILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHH-HHHhccCCCCEEEEEEEEEcCC
Confidence 44667899999999999999999855 4599999999976543 35677887 667776 999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|+|||+|.| |.|.+.+.. . .+++.++..+++||+.|++
T Consensus 110 ~~~lvmEL~~G----------GeLfd~i~~-----------------------------~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 110 SVYLVMELCEG----------GELFDRIVK-----------------------------K-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred eEEEEEEecCC----------chHHHHHHH-----------------------------c-cCCHHHHHHHHHHHHHHHH
Confidence 99999998874 344333321 1 2678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|||+.|||||||||+|+|+.... ...+|++|||+|+.......
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~----------------------------------- 194 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER----------------------------------- 194 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce-----------------------------------
Confidence 99999999999999999997542 24699999999998765211
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCC-CCchhHHH-HHHhhcc---cccccCCCHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDA-NIVKDRK---DLFLVEHIPEAVDL 773 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf-~~~~~~~~-~i~~~~~---~~~~~~~~~e~~dL 773 (934)
....+||+.|+|||++....|+..+||||+||++|.|++| .+|| ++...... .+..... ...+...+..+++|
T Consensus 195 -~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G-~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~ 272 (382)
T KOG0032|consen 195 -LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSG-VPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDF 272 (382)
T ss_pred -EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhC-CCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHH
Confidence 1236899999999999999999999999999999999997 5555 44433333 3333322 22234456899999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
|.+||..||.+|+|+.++|+|||+...
T Consensus 273 i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 273 IRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred HHHhcccCcccCCCHHHHhcCccccCC
Confidence 999999999999999999999998764
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=358.30 Aligned_cols=247 Identities=26% Similarity=0.380 Sum_probs=191.4
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|.+.+.||+|+||+||++.. .+++.||||++.... .+...+|+. +++.++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELK-MLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHH-HHHhCCCccccchhhhEecCCEEEEEEe
Confidence 578889999999999999855 468899999986532 133456665 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+++.+.+.. ...++++..++.++.||+.||+|||+++|
T Consensus 81 ~~~~~~l~~~~~---------------------------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 121 (287)
T cd07848 81 YVEKNMLELLEE---------------------------------------MPNGVPPEKVRSYIYQLIKAIHWCHKNDI 121 (287)
T ss_pred cCCCCHHHHHHh---------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 887654433210 02346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++.+....... .....||+
T Consensus 122 ~H~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~~ 165 (287)
T cd07848 122 VHRDIKPENLLISHND--VLKLCDFGFARNLSEGSNAN----------------------------------YTEYVATR 165 (287)
T ss_pred ecCCCCHHHEEEcCCC--cEEEeeccCccccccccccc----------------------------------cccccccc
Confidence 9999999999997665 49999999998764322110 01145899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc---------------------c----
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK---------------------D---- 760 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~---------------------~---- 760 (934)
.|+|||++.+..++.++|||||||++|||++| .+||....... ..+..... +
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (287)
T cd07848 166 WYRSPELLLGAPYGKAVDMWSVGCILGELSDG-QPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNH 244 (287)
T ss_pred ccCCcHHHcCCCCCCchhHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccC
Confidence 99999999998999999999999999999996 67776432211 11110000 0
Q ss_pred ------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......++++.+||++||+.||++|||++++|+||||
T Consensus 245 ~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 245 PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0001245679999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=362.39 Aligned_cols=259 Identities=31% Similarity=0.459 Sum_probs=215.0
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChh-----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
-.|...|.+.+.||+|.|+.|-++ +.++|..||||++.+...+ ..++|+. -|+..+|||||++|++...+..+
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVR-CMKLVQHpNiVRLYEViDTQTKl 92 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVR-CMKLVQHPNIVRLYEVIDTQTKL 92 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHH-HHHHhcCcCeeeeeehhcccceE
Confidence 467789999999999999999887 5689999999999887653 4577876 77899999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|||+|+-++ +|.|||. .. ..|+.++..++++.||+.|+.|
T Consensus 93 yLiLELGD~GDl~DyIm-----------KH----------------------------e~Gl~E~La~kYF~QI~~AI~Y 133 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIM-----------KH----------------------------EEGLNEDLAKKYFAQIVHAISY 133 (864)
T ss_pred EEEEEecCCchHHHHHH-----------hh----------------------------hccccHHHHHHHHHHHHHHHHH
Confidence 999996653 5555542 11 4567888899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
+|...+|||||||+||.+-..-. .|||.|||++..+.++..- +
T Consensus 134 CHqLHVVHRDLKPENVVFFEKlG-lVKLTDFGFSNkf~PG~kL------------------------------------~ 176 (864)
T KOG4717|consen 134 CHQLHVVHRDLKPENVVFFEKLG-LVKLTDFGFSNKFQPGKKL------------------------------------T 176 (864)
T ss_pred HhhhhhhcccCCcceeEEeeecC-ceEeeeccccccCCCcchh------------------------------------h
Confidence 99999999999999998865543 4999999999887765432 2
Q ss_pred cCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
+.||+..|-|||++.+..| .+++||||||||||.|++| ++||.+..+. ....+..-+...+...+.+++|||.+||.
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCG-q~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLv 255 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCG-QPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLV 255 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhC-CCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHh
Confidence 3789999999999999999 5799999999999999985 8888765433 23333344444556677899999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCCccchhh
Q 002343 780 PNPDLRPKAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~~~~~~~ 805 (934)
.||++|.+.+||..|+|+...+..+.
T Consensus 256 RdPkkRAslEeI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 256 RDPKKRASLEEIVSTSWLQAGDRGLS 281 (864)
T ss_pred cCchhhccHHHHhccccccCCCCCcc
Confidence 99999999999999999988776543
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=366.41 Aligned_cols=252 Identities=26% Similarity=0.401 Sum_probs=189.8
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC-----CeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ-----DFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~-----~~~ 542 (934)
+|.+.+.||+|+||+||++. ..+|+.||||++.... .....+|+. +++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIK-LLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHH-HHHhCCCCCEeeecceEeccCCCCCceE
Confidence 47788999999999999985 4578999999986421 123456765 77889999999999987643 358
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||+++|.+++.. ...+++..++.++.||+.||+||
T Consensus 80 ~lv~e~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~aL~~L 119 (338)
T cd07859 80 YVVFELMESDLHQVIKA----------------------------------------NDDLTPEHHQFFLYQLLRALKYI 119 (338)
T ss_pred EEEEecCCCCHHHHHHh----------------------------------------cccCCHHHHHHHHHHHHHHHHHH
Confidence 99999988766655421 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.......... ..+.
T Consensus 120 H~~~ivH~dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~--------------------------------~~~~ 165 (338)
T cd07859 120 HTANVFHRDLKPKNILANADC--KLKICDFGLARVAFNDTPTAI--------------------------------FWTD 165 (338)
T ss_pred HHCCeecCCCCHHHeEECCCC--cEEEccCccccccccccCccc--------------------------------cccC
Confidence 999999999999999997665 499999999986533211100 0112
Q ss_pred CCCCCccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH------------------------
Q 002343 703 GYGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV------------------------ 755 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~------------------------ 755 (934)
..||+.|+|||++.+ ..++.++|||||||++|||++| .+||..... .....+
T Consensus 166 ~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (338)
T cd07859 166 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYL 244 (338)
T ss_pred CCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence 469999999999876 6789999999999999999996 677753221 111000
Q ss_pred ---hhcccc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 756 ---KDRKDL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 756 ---~~~~~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
...... ..+..++++.+||.+||+.||++|||++|+++||||....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 245 SSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred HhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 000000 0123457889999999999999999999999999996543
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=364.76 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=191.8
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+.. .....+|+..+....+||||+++++++.+.+.+|+|||||.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~- 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN- 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC-
Confidence 3699999999999854 468999999987532 12345566545455689999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 80 ---------~g~L~~~i~~-----------------------------~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~d 121 (320)
T cd05590 80 ---------GGDLMFHIQK-----------------------------SRRFDEARARFYAAEITSALMFLHDKGIIYRD 121 (320)
T ss_pred ---------CchHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 3444443321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~NIli~~~~~--~kL~DfG~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (320)
T cd05590 122 LKLDNVLLDHEGH--CKLADFGMCKEGIFNGKT-----------------------------------TSTFCGTPDYIA 164 (320)
T ss_pred CCHHHeEECCCCc--EEEeeCCCCeecCcCCCc-----------------------------------ccccccCccccC
Confidence 9999999976654 899999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH--
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
||++.+..++.++|||||||++|+|++| .+||.... ......+.......+...++++.+||.+||+.||++||++
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 165 PEILQEMLYGPSVDWWAMGVLLYEMLCG-HAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHhhC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 9999998999999999999999999996 66775443 3333333333333444567899999999999999999998
Q ss_pred ----HHHHcCCCCCCccc
Q 002343 789 ----QNVLNHPFFWTADT 802 (934)
Q Consensus 789 ----~evL~HPff~~~~~ 802 (934)
+++++||||...++
T Consensus 244 ~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 244 LGGEEAILRHPFFKELDW 261 (320)
T ss_pred CCCHHHHHcCCCcCCCCH
Confidence 99999999976543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=345.93 Aligned_cols=248 Identities=25% Similarity=0.390 Sum_probs=197.6
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
..|.-.++||+|..++|..+ ...+|...|+|++..... +...+|+..+.....||||+.+.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 34555678999999999876 566789999999863211 234566766667779999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
++++|+| .++.|.|+++|... -.+++...++||+|+..|++
T Consensus 97 F~FlVFd----------l~prGELFDyLts~-----------------------------VtlSEK~tR~iMrqlfegVe 137 (411)
T KOG0599|consen 97 FVFLVFD----------LMPRGELFDYLTSK-----------------------------VTLSEKETRRIMRQLFEGVE 137 (411)
T ss_pred hhhhhhh----------hcccchHHHHhhhh-----------------------------eeecHHHHHHHHHHHHHHHH
Confidence 9999999 56667777777542 23577888999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||.++||||||||+|||++++ .++||+|||+|+.+.++..-
T Consensus 138 ylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~GekL------------------------------------ 179 (411)
T KOG0599|consen 138 YLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEKL------------------------------------ 179 (411)
T ss_pred HHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchhH------------------------------------
Confidence 9999999999999999999655 45999999999998876432
Q ss_pred ecCCCCCccccchhccc------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccc---cCCCHH
Q 002343 701 TVGYGSSGWQAPEQLLQ------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFL---VEHIPE 769 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~---~~~~~e 769 (934)
...||||+|.|||.+.. ..|+..+|+|++|||||-|+.| .+||....+.. ..++.+...... .+.+.+
T Consensus 180 relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG-cpPFwHRkQmlMLR~ImeGkyqF~speWadis~~ 258 (411)
T KOG0599|consen 180 RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG-CPPFWHRKQMLMLRMIMEGKYQFRSPEWADISAT 258 (411)
T ss_pred HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC-CCchhHHHHHHHHHHHHhcccccCCcchhhcccc
Confidence 12689999999999864 3578899999999999999996 66665543332 344444433322 334678
Q ss_pred HHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
++|||.+||+.||.+|.|++|+|+||||.
T Consensus 259 ~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 259 VKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred HHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 99999999999999999999999999993
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=365.91 Aligned_cols=247 Identities=26% Similarity=0.362 Sum_probs=193.5
Q ss_pred eeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++. ..+|+.||+|.+.+... ....+|++ ++..++||||+++++++.+.+..|||||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~-~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~- 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR-VLQNSRHPFLTALKYSFQTHDRLCFVMEYAN- 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCCCCceEEEEEcCCEEEEEEeCCC-
Confidence 469999999999984 46789999999975321 12334444 7788899999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCCccc
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHR 630 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gIVHR 630 (934)
+|+|..++.. ...+++.+++.++.||+.||+|||+ +||+||
T Consensus 79 ---------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 79 ---------GGELFFHLSR-----------------------------ERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred ---------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 3444443321 2346788899999999999999997 799999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++......... ...+||+.|+
T Consensus 121 Dikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~-----------------------------------~~~~gt~~y~ 163 (325)
T cd05594 121 DLKLENLMLDKDG--HIKITDFGLCKEGIKDGATM-----------------------------------KTFCGTPEYL 163 (325)
T ss_pred CCCCCeEEECCCC--CEEEecCCCCeecCCCCccc-----------------------------------ccccCCcccC
Confidence 9999999997665 49999999987543221110 1146999999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc---
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP--- 786 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP--- 786 (934)
|||++.+..++.++|||||||++|||++| ..||.. ........+.......+...++++.+||.+||+.||++|+
T Consensus 164 aPE~~~~~~~~~~~DiwslG~il~el~tG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (325)
T cd05594 164 APEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGG 242 (325)
T ss_pred CHHHHccCCCCCccccccccceeeeeccC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCC
Confidence 99999999999999999999999999997 556643 4444444444334444556788999999999999999996
Q ss_pred --CHHHHHcCCCCCCccch
Q 002343 787 --KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 --Ta~evL~HPff~~~~~~ 803 (934)
++.++++||||.+..+.
T Consensus 243 ~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 243 PDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred CCCHHHHhcCCCcCCCCHH
Confidence 99999999999876544
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=365.11 Aligned_cols=247 Identities=26% Similarity=0.338 Sum_probs=192.7
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+|+.||||++.+... ...+.|+..+++.++||||+++++++.+.+..|+|||||.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN- 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC-
Confidence 4699999999999855 5789999999865321 2334555557788999999999999999999999999655
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 80 ---------~g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~givH~d 121 (323)
T cd05575 80 ---------GGELFFHLQR-----------------------------ERSFPEPRARFYAAEIASALGYLHSLNIIYRD 121 (323)
T ss_pred ---------CCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 4455444421 23467788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 122 ikp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (323)
T cd05575 122 LKPENILLDSQG--HVVLTDFGLCKEGIEHSKT-----------------------------------TSTFCGTPEYLA 164 (323)
T ss_pred CCHHHeEECCCC--cEEEeccCCCcccccCCCc-----------------------------------cccccCChhhcC
Confidence 999999997665 4999999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH--
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
||++.+..++.++|||||||++|||++| .+||.. ........+...........++++.+||.+||+.||++||++
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 165 PEVLRKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred hhhhcCCCCCccccccccchhhhhhhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence 9999999999999999999999999996 566654 333333333333333344567899999999999999999998
Q ss_pred --HHHHcCCCCCCccc
Q 002343 789 --QNVLNHPFFWTADT 802 (934)
Q Consensus 789 --~evL~HPff~~~~~ 802 (934)
.++++||||...++
T Consensus 244 ~~~~il~~~~~~~~~~ 259 (323)
T cd05575 244 DFLEIKNHVFFSSINW 259 (323)
T ss_pred CHHHHHcCCCcCCCCH
Confidence 69999999976544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=362.77 Aligned_cols=247 Identities=25% Similarity=0.348 Sum_probs=190.7
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+|+.||||.+.+.. ......|+..+....+||||+++++++.+.+++|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999854 468999999997532 123445555444566999999999999999999999996653
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
|+|..++.. ...+++.++..++.||+.||+|||++||+|||
T Consensus 81 ----------g~L~~~i~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD 121 (316)
T cd05620 81 ----------GDLMFHIQD-----------------------------KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRD 121 (316)
T ss_pred ----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 444333321 23457788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (316)
T cd05620 122 LKLDNVMLDRDG--HIKIADFGMCKENVFGDNR-----------------------------------ASTFCGTPDYIA 164 (316)
T ss_pred CCHHHeEECCCC--CEEeCccCCCeecccCCCc-----------------------------------eeccCCCcCccC
Confidence 999999997665 4999999998743211110 112569999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH-H
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-Q 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-~ 789 (934)
||++.+..++.++|||||||++|||++| .+||.. ........+.......+...+.++++||.+||+.||++||++ +
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~el~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~ 243 (316)
T cd05620 165 PEILQGLKYTFSVDWWSFGVLLYEMLIG-QSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVG 243 (316)
T ss_pred HHHHcCCCCCcccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 9999999999999999999999999996 666654 333333333333333444567899999999999999999998 5
Q ss_pred HHHcCCCCCCccc
Q 002343 790 NVLNHPFFWTADT 802 (934)
Q Consensus 790 evL~HPff~~~~~ 802 (934)
++++||||...+.
T Consensus 244 ~~~~h~~f~~~~~ 256 (316)
T cd05620 244 NIRGHPFFKTINW 256 (316)
T ss_pred HHHcCCCcCCCCH
Confidence 8999999977554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=380.74 Aligned_cols=254 Identities=24% Similarity=0.303 Sum_probs=193.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec--------CCe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD--------QDF 541 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--------~~~ 541 (934)
..+.|.+.+.||+|+||+||++.. .+++.||||++.... ....+|+. +++.++|||||++++++.. ..+
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-~~~~~Ei~-il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-QYKNRELL-IMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHH-HHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 456799999999999999999854 568999999986543 23345665 7888999999999987643 236
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|+|||||+++|.+++... . .....+++..++.++.||+.||+|
T Consensus 142 l~lvmE~~~~~l~~~~~~~-------~-----------------------------~~~~~l~~~~~~~~~~qi~~gL~y 185 (440)
T PTZ00036 142 LNVVMEFIPQTVHKYMKHY-------A-----------------------------RNNHALPLFLVKLYSYQLCRALAY 185 (440)
T ss_pred EEEEEecCCccHHHHHHHH-------h-----------------------------hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999988776655210 0 013457888899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++|||||||||+|||++.++. .+||+|||+|+.+.......
T Consensus 186 LH~~~IiHrDLKp~NILl~~~~~-~vkL~DFGla~~~~~~~~~~------------------------------------ 228 (440)
T PTZ00036 186 IHSKFICHRDLKPQNLLIDPNTH-TLKLCDFGSAKNLLAGQRSV------------------------------------ 228 (440)
T ss_pred HHHCCEecCCcCHHHEEEcCCCC-ceeeeccccchhccCCCCcc------------------------------------
Confidence 99999999999999999975542 58999999998765322110
Q ss_pred cCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc--------------------
Q 002343 702 VGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR-------------------- 758 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~-------------------- 758 (934)
...||+.|+|||++.+. .++.++|||||||++|||++| .+||..... ....++...
T Consensus 229 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG-~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~ 307 (440)
T PTZ00036 229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG-YPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF 307 (440)
T ss_pred cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccC
Confidence 14589999999998764 689999999999999999997 667654321 111111100
Q ss_pred --------ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 --------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 --------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
...++...++++++||.+||+.||.+|||+.|+|+||||...
T Consensus 308 ~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 308 PDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred CccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 000122346789999999999999999999999999999654
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=370.67 Aligned_cols=261 Identities=27% Similarity=0.390 Sum_probs=208.5
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
..|...+.||+|+||.||++ ...+++.||+|++.-...+ ...+|+. ++++++|+||.++|+.+..+..+|++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~-~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEIS-VLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHH-HHHhcCcchHHhhhhheeecccHHHHHH
Confidence 34555688999999999998 5677999999999755432 3445554 8899999999999999999999999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||.+ ++.+++.. ...+.+.++..++++++.||.|||.++
T Consensus 92 y~~gGsv~~lL~~----------------------------------------~~~~~E~~i~~ilre~l~~l~ylH~~~ 131 (467)
T KOG0201|consen 92 YCGGGSVLDLLKS----------------------------------------GNILDEFEIAVILREVLKGLDYLHSEK 131 (467)
T ss_pred HhcCcchhhhhcc----------------------------------------CCCCccceeeeehHHHHHHhhhhhhcc
Confidence 7764 44444321 122256677889999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
.+|||||+.|||+..++. +||+|||.+..+....... .+.+||
T Consensus 132 kiHrDIKaanil~s~~g~--vkl~DfgVa~ql~~~~~rr-----------------------------------~tfvGT 174 (467)
T KOG0201|consen 132 KIHRDIKAANILLSESGD--VKLADFGVAGQLTNTVKRR-----------------------------------KTFVGT 174 (467)
T ss_pred eecccccccceeEeccCc--EEEEecceeeeeechhhcc-----------------------------------cccccc
Confidence 999999999999988765 9999999998876643321 126899
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|.|||||++.+..|+.|+||||||++.+||++| .||+.+... +. ..|.+..++.....+++.+++|+..||++||+.
T Consensus 175 PfwMAPEVI~~~~Y~~KADIWSLGITaiEla~G-ePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~ 253 (467)
T KOG0201|consen 175 PFWMAPEVIKQSGYDTKADIWSLGITAIELAKG-EPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEF 253 (467)
T ss_pred ccccchhhhccccccchhhhhhhhHHHHHHhcC-CCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence 999999999999999999999999999999995 888876543 22 234444555555567889999999999999999
Q ss_pred CcCHHHHHcCCCCCCccchhhhhhhhccc
Q 002343 785 RPKAQNVLNHPFFWTADTRLSFLRDVSDR 813 (934)
Q Consensus 785 RPTa~evL~HPff~~~~~~~~fl~~~sd~ 813 (934)
||+|.++|+|+|++. .++...|.++.++
T Consensus 254 RpsA~~LLKh~FIk~-a~k~s~L~~~i~r 281 (467)
T KOG0201|consen 254 RPSAKELLKHKFIKR-AKKTSELKELIDR 281 (467)
T ss_pred CcCHHHHhhhHHHHh-cCCchHHHHHHHH
Confidence 999999999999987 4444455544443
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=362.35 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=191.4
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+.. .+....|...+....+||||+++++++...+..|+|||||.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~- 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN- 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC-
Confidence 4699999999999854 468899999987532 12234455444455689999999999999999999999664
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++.++..++.||+.||+|||+++|+|||
T Consensus 80 ---------gg~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d 121 (316)
T cd05592 80 ---------GGDLMFHIQS-----------------------------SGRFDEARARFYAAEIICGLQFLHKKGIIYRD 121 (316)
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 3444444321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+|+........ ....+||+.|+|
T Consensus 122 lkp~Nill~~~~--~~kL~Dfg~a~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (316)
T cd05592 122 LKLDNVLLDKDG--HIKIADFGMCKENMNGEGK-----------------------------------ASTFCGTPDYIA 164 (316)
T ss_pred CCHHHeEECCCC--CEEEccCcCCeECCCCCCc-----------------------------------cccccCCccccC
Confidence 999999997665 4899999999764322110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH-H
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-Q 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-~ 789 (934)
||++.+..++.++|||||||++|||++| ..||... .......+.......+...+.++.+||.+||+.||.+||++ +
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 165 PEILKGQKYNESVDWWSFGVLLYEMLIG-QSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHHHcCCCCCCcccchhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 9999999999999999999999999996 6676543 33333333333333445567899999999999999999986 5
Q ss_pred HHHcCCCCCCccch
Q 002343 790 NVLNHPFFWTADTR 803 (934)
Q Consensus 790 evL~HPff~~~~~~ 803 (934)
++++||||...++.
T Consensus 244 ~l~~h~~~~~~~~~ 257 (316)
T cd05592 244 DIRQHPFFRGIDWE 257 (316)
T ss_pred HHHcCcccCCCCHH
Confidence 89999999876543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=354.58 Aligned_cols=247 Identities=28% Similarity=0.419 Sum_probs=186.8
Q ss_pred eEEEeeeecccCcEEEEEEEE--ecCcEEEEEEeecCCh-----hHHHHHHHHH--HHhCCCCceeEEEEEEe-----cC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTHH-----DVALKEIQNL--IASDQHPNIVRWYGVES-----DQ 539 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~--~~g~~VAVK~l~~~~~-----~~~~~Ei~~l--l~~l~HpNIV~l~g~~~-----~~ 539 (934)
+|.+.+.||+|+||+||++.. ..|+.||||++..... ....+|+..+ +..++||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 577889999999999999854 3478899999864321 2344565422 23457999999999885 34
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..+|+|||+|.++|.+++... ...++++.+++.++.||+.||
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~--------------------------------------~~~~~~~~~~~~i~~qi~~aL 123 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKV--------------------------------------PEPGVPTETIKDMMFQLLRGL 123 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhC--------------------------------------CCCCCCHHHHHHHHHHHHHHH
Confidence 569999998877766655210 123467888999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++ .+||+|||+++.......
T Consensus 124 ~~lH~~~iiH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~------------------------------------ 165 (290)
T cd07862 124 DFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMA------------------------------------ 165 (290)
T ss_pred HHHHHCCeeeCCCCHHHEEEcCCC--CEEEccccceEeccCCcc------------------------------------
Confidence 999999999999999999997665 499999999986543210
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhccc-----------------
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKD----------------- 760 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~----------------- 760 (934)
.....||+.|+|||++.+..++.++|||||||++|||++| .+||..... ....++.....
T Consensus 166 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 244 (290)
T cd07862 166 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 244 (290)
T ss_pred cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC-CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhc
Confidence 0114589999999999998999999999999999999995 777764322 11222211000
Q ss_pred ---------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ---------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ---------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......++.+++||.+||+.||++|||+.|+|+||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 245 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred cCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0012345678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=347.67 Aligned_cols=254 Identities=27% Similarity=0.371 Sum_probs=195.9
Q ss_pred eecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD--QDF 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~ 541 (934)
+.-+.|...+.|++|+||.||++ +..+++.||+|+++-... -..+|||. ++...+|||||.+..+... -+.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIn-iLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREIN-ILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHH-HHHhcCCCCeeeeEEEEeccccce
Confidence 33455677789999999999998 456789999999964432 35789997 6667789999999988765 457
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|||||||+.+|..++... .+++...+++.++.|+++||+|
T Consensus 152 iy~VMe~~EhDLksl~d~m---------------------------------------~q~F~~~evK~L~~QlL~glk~ 192 (419)
T KOG0663|consen 152 IYIVMEYVEHDLKSLMETM---------------------------------------KQPFLPGEVKTLMLQLLRGLKH 192 (419)
T ss_pred eeeeHHHHHhhHHHHHHhc---------------------------------------cCCCchHHHHHHHHHHHHHHHH
Confidence 9999999998877766310 2456778899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||.+.|+||||||+|+|++..| ++||+|||||+.+....... |
T Consensus 193 lH~~wilHRDLK~SNLLm~~~G--~lKiaDFGLAR~ygsp~k~~-----------------------------------T 235 (419)
T KOG0663|consen 193 LHDNWILHRDLKTSNLLLSHKG--ILKIADFGLAREYGSPLKPY-----------------------------------T 235 (419)
T ss_pred HhhceeEecccchhheeeccCC--cEEecccchhhhhcCCcccC-----------------------------------c
Confidence 9999999999999999997766 49999999999876543222 2
Q ss_pred cCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhh---cc---------------cc
Q 002343 702 VGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKD---RK---------------DL 761 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~---~~---------------~~ 761 (934)
..+-|..|+|||.+.+. .|+.++|+||+|||+.||+++...+-|.....+. .|.+. .. ..
T Consensus 236 ~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~ 315 (419)
T KOG0663|consen 236 PLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMT 315 (419)
T ss_pred ceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccc
Confidence 24568999999999886 4899999999999999999964333343322221 11110 00 00
Q ss_pred ------------ccc-CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 762 ------------FLV-EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 762 ------------~~~-~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+.. ..+....+|+..+|..||++|.||+|.|+|+||...
T Consensus 316 f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 316 FSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred cCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 000 123678899999999999999999999999999773
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=367.40 Aligned_cols=244 Identities=26% Similarity=0.412 Sum_probs=197.3
Q ss_pred EEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
+.+.+.||+|-||+|+++.......||||.++.... +...+|++ +|+.++|+|||+++++|..++.+|||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~-iMk~L~H~~lV~l~gV~~~~~piyIVtE----- 281 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQ-IMKKLRHEKLVKLYGVCTKQEPIYIVTE----- 281 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHH-HHHhCcccCeEEEEEEEecCCceEEEEE-----
Confidence 345688999999999995444445999999976432 34455665 8999999999999999999999999999
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
||..|+|.+||+... ...+...+++.++.|||+|++||+++++|||||
T Consensus 282 -----~m~~GsLl~yLr~~~---------------------------~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDL 329 (468)
T KOG0197|consen 282 -----YMPKGSLLDYLRTRE---------------------------GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDL 329 (468)
T ss_pred -----ecccCcHHHHhhhcC---------------------------CCccchHHHHHHHHHHHHHHHHHHhCCccchhh
Confidence 888999999987521 234566789999999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
.++||||+.+ .+|||+||||||...++........ -=...|.||
T Consensus 330 AARNiLV~~~--~~vKIsDFGLAr~~~d~~Y~~~~~~----------------------------------kfPIkWtAP 373 (468)
T KOG0197|consen 330 AARNILVDED--LVVKISDFGLARLIGDDEYTASEGG----------------------------------KFPIKWTAP 373 (468)
T ss_pred hhhheeeccC--ceEEEcccccccccCCCceeecCCC----------------------------------CCCceecCH
Confidence 9999999654 4799999999995555443322211 123479999
Q ss_pred hhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccc-cCCCHHHHHHHHHcccCCCCCCcCHHH
Q 002343 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFL-VEHIPEAVDLFTRLLDPNPDLRPKAQN 790 (934)
Q Consensus 713 E~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~-~~~~~e~~dLI~~~L~~DP~~RPTa~e 790 (934)
|.+..++++.|||||||||+||||+|-|+.||..... +....+.....+.. ..+++++.+++..||..+|++|||++.
T Consensus 374 Ea~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 374 EALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred HHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 9999999999999999999999999999999987654 34455555555544 456779999999999999999999985
Q ss_pred HH
Q 002343 791 VL 792 (934)
Q Consensus 791 vL 792 (934)
+.
T Consensus 454 L~ 455 (468)
T KOG0197|consen 454 LR 455 (468)
T ss_pred HH
Confidence 54
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=371.81 Aligned_cols=269 Identities=26% Similarity=0.368 Sum_probs=214.1
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.|...+.||.|+||.||++. ..+.+.||||++.-... ..+++|+. .+..++|||+|.|.|||..+...||
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVr-FL~~l~HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVR-FLRQLRHPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHH-HHHhccCCCcccccceeeccchHHH
Confidence 3556667899999999999984 56778999999964322 35688887 8899999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||-|+-.|++.+. ..++-+-++..|+.+.+.||+|||+
T Consensus 104 VMEYClGSAsDlleVh---------------------------------------kKplqEvEIAAi~~gaL~gLaYLHS 144 (948)
T KOG0577|consen 104 VMEYCLGSASDLLEVH---------------------------------------KKPLQEVEIAAITHGALQGLAYLHS 144 (948)
T ss_pred HHHHHhccHHHHHHHH---------------------------------------hccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888653 3455667889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++.||||||..|||++..+ .|||+|||.|....+..+ ++
T Consensus 145 ~~~IHRDiKAGNILLse~g--~VKLaDFGSAsi~~PAns---------------------------------------Fv 183 (948)
T KOG0577|consen 145 HNRIHRDIKAGNILLSEPG--LVKLADFGSASIMAPANS---------------------------------------FV 183 (948)
T ss_pred hhHHhhhccccceEecCCC--eeeeccccchhhcCchhc---------------------------------------cc
Confidence 9999999999999998766 499999999876554321 68
Q ss_pred CCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhccc-ccccCCCHHHHHHHHHcc
Q 002343 705 GSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKD-LFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 705 GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~~~-~~~~~~~~e~~dLI~~~L 778 (934)
|||.|||||++. .+.|+-++||||||+++.||.- ++||+-+.. .....|..+..+ +...+++..++.|+..||
T Consensus 184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE-RkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CL 262 (948)
T KOG0577|consen 184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCL 262 (948)
T ss_pred CCccccchhHheeccccccCCccceeeccchhhhhhh-cCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHH
Confidence 999999999986 4689999999999999999999 466655433 233445444433 445567789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCccchhhhhhhhcccchhccccchH
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDS 823 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~~~~~fl~~~sd~~e~~~~~~~~ 823 (934)
++-|.+|||.+++|.|+|...... ...+.++..|....-++.+.
T Consensus 263 qKipqeRptse~ll~H~fv~R~Rp-~tvi~dLIqRTKdaVrELDN 306 (948)
T KOG0577|consen 263 QKIPQERPTSEELLKHRFVLRERP-PTVIMDLIQRTKDAVRELDN 306 (948)
T ss_pred hhCcccCCcHHHHhhcchhccCCC-chHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999854332 33445555554444444443
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=373.86 Aligned_cols=247 Identities=22% Similarity=0.275 Sum_probs=190.5
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
..|.+.+.||+|+||.||++. ..+++.||+|.... ....+|++ +++.++|||||++++++......|+|||++.+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~ 167 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAH-ILRAINHPSIIQLKGTFTYNKFTCLILPRYKT 167 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHH-HHHhCCCCCCCCEeEEEEECCeeEEEEecCCC
Confidence 468999999999999999984 46789999997542 34566775 88899999999999999999999999998776
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|.+++. . ...+++.+++.++.||+.||+|||++||||||
T Consensus 168 ~L~~~l~-----------~-----------------------------~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD 207 (391)
T PHA03212 168 DLYCYLA-----------A-----------------------------KRNIAICDILAIERSVLRAIQYLHENRIIHRD 207 (391)
T ss_pred CHHHHHH-----------h-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5544431 1 23467788999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+|+......... ....+||+.|+|
T Consensus 208 iKP~NIll~~~~~--vkL~DFG~a~~~~~~~~~~----------------------------------~~~~~gt~~y~a 251 (391)
T PHA03212 208 IKAENIFINHPGD--VCLGDFGAACFPVDINANK----------------------------------YYGWAGTIATNA 251 (391)
T ss_pred CChHhEEEcCCCC--EEEEeCCcccccccccccc----------------------------------cccccCccCCCC
Confidence 9999999976654 8999999997543211100 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-------hHH-HHHHhh-------------------------c
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-------ERD-ANIVKD-------------------------R 758 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-------~~~-~~i~~~-------------------------~ 758 (934)
||++.+..++.++|||||||++|||++|..++|.... ... ..++.. .
T Consensus 252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 331 (391)
T PHA03212 252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKK 331 (391)
T ss_pred hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhc
Confidence 9999999999999999999999999998666664310 000 001000 0
Q ss_pred cccc---------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 759 KDLF---------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 759 ~~~~---------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.... ....+.++.+||.+||+.||++||||+|+|+||||..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 332 SSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred cCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 0000 0112357889999999999999999999999999965
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=361.42 Aligned_cols=248 Identities=25% Similarity=0.330 Sum_probs=191.0
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+... +....|+..+....+||||+++++++.+.+..|+|||||.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999854 4588999999875321 22345555344455899999999999999999999996653
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
|+|..++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 81 ----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 81 ----------GDLMFQIQR-----------------------------SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred ----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 444333321 23467788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+|+........ ....+||+.|+|
T Consensus 122 ikp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (321)
T cd05591 122 LKLDNILLDAEGH--CKLADFGMCKEGILNGVT-----------------------------------TTTFCGTPDYIA 164 (321)
T ss_pred CCHHHeEECCCCC--EEEeecccceecccCCcc-----------------------------------ccccccCccccC
Confidence 9999999976654 999999998754321110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc----
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP---- 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP---- 786 (934)
||++.+..++.++|||||||++|+|++| .+||..... .....+.......+...++++.+||.+||+.||++||
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~tg-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~ 243 (321)
T cd05591 165 PEILQELEYGPSVDWWALGVLMYEMMAG-QPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVA 243 (321)
T ss_pred HHHHcCCCCCCccceechhHHHHHHhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence 9999999999999999999999999996 677755433 2233333333334445678999999999999999999
Q ss_pred ---CHHHHHcCCCCCCccch
Q 002343 787 ---KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 ---Ta~evL~HPff~~~~~~ 803 (934)
+++++++||||...++.
T Consensus 244 ~~~~~~~~~~hp~~~~~~~~ 263 (321)
T cd05591 244 SQGGEDAIKQHPFFKEIDWV 263 (321)
T ss_pred CCCCHHHHhcCCccCCCCHH
Confidence 99999999999765543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=361.09 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=194.9
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHH--HHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQ--NLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~--~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. .++..++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45678999999999999854 5689999999975321 22333433 234567899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|..++. ...+++.+++.++.||+.||+|||++
T Consensus 81 ~E~~~~----------~~L~~~~~------------------------------~~~l~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05589 81 MEYAAG----------GDLMMHIH------------------------------TDVFSEPRAVFYAACVVLGLQYLHEN 120 (324)
T ss_pred EcCCCC----------CcHHHHhh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 996654 44433321 23467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+++........ ....+|
T Consensus 121 ~ivHrdlkp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~-----------------------------------~~~~~g 163 (324)
T cd05589 121 KIVYRDLKLDNLLLDTEGF--VKIADFGLCKEGMGFGDR-----------------------------------TSTFCG 163 (324)
T ss_pred CeEecCCCHHHeEECCCCc--EEeCcccCCccCCCCCCc-----------------------------------cccccc
Confidence 9999999999999977664 999999998753321110 011469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||... .......+.......+...++++.+||.+||+.||.+
T Consensus 164 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~ 242 (324)
T cd05589 164 TPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG-ESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPER 242 (324)
T ss_pred CccccCHhHhcCCCCCcccchhhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhH
Confidence 9999999999999999999999999999999996 6677543 3333333333334445566789999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccchh
Q 002343 785 RP-----KAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~~ 804 (934)
|| ++.++++||||.+.+...
T Consensus 243 R~~~~~~~~~~l~~~~~f~~~~~~~ 267 (324)
T cd05589 243 RLGSGEKDAEDVKKQPFFRDINWDD 267 (324)
T ss_pred cCCCCCCCHHHHhhCCCcCCCCHHH
Confidence 99 699999999998765443
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=363.10 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=192.2
Q ss_pred eeecccCcEEEEEEE-EecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++. ..+|+.||||++.+.. .....+|+..+++.++||||+++++++...+..|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~- 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN- 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC-
Confidence 469999999999985 4578999999986532 12334555557788999999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++.+++.++.||+.||+|||++||+|||
T Consensus 80 ---------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~givH~D 121 (325)
T cd05604 80 ---------GGELFFHLQR-----------------------------ERSFPEPRARFYAAEIASALGYLHSINIVYRD 121 (325)
T ss_pred ---------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 3444443321 34567888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~NIll~~~~~--~kL~DfG~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (325)
T cd05604 122 LKPENILLDSQGH--VVLTDFGLCKEGIAQSDT-----------------------------------TTTFCGTPEYLA 164 (325)
T ss_pred CCHHHeEECCCCC--EEEeecCCcccCCCCCCC-----------------------------------cccccCChhhCC
Confidence 9999999976664 899999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH--
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
||++.+..++.++|||||||++|||++| .+||.. ........+........+..+.++.++|.+||+.||.+||++
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 165 PEVIRKQPYDNTVDWWCLGAVLYEMLYG-LPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHcCCCCCCcCccccccceehhhhcC-CCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 9999999999999999999999999997 556644 333333333333333344567899999999999999999977
Q ss_pred --HHHHcCCCCCCccc
Q 002343 789 --QNVLNHPFFWTADT 802 (934)
Q Consensus 789 --~evL~HPff~~~~~ 802 (934)
.++++||||....+
T Consensus 244 ~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 244 DFLEIQEHPFFESLSW 259 (325)
T ss_pred CHHHHhcCCCcCCCCH
Confidence 58999999976544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=360.47 Aligned_cols=251 Identities=25% Similarity=0.353 Sum_probs=191.4
Q ss_pred EEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~ 542 (934)
|.+.+.||+|+||+||++.. .+++.||+|++.+... +...+|+. ++..+ +||||+++++++.+++.+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERN-VLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHH-HHHhccCCCCcccEEEEEecCCEE
Confidence 67789999999999998754 3588999999864321 22344555 55555 699999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||. +|+|.+++.. ...+++.+++.++.||+.||+||
T Consensus 81 ~lv~e~~~----------~g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~l 121 (332)
T cd05614 81 HLILDYVS----------GGEMFTHLYQ-----------------------------RDNFSEDEVRFYSGEIILALEHL 121 (332)
T ss_pred EEEEeCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999665 4444444321 24467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++. +||+|||+++.......... ..
T Consensus 122 H~~~ivHrDlkp~Nili~~~~~--~kl~DfG~~~~~~~~~~~~~----------------------------------~~ 165 (332)
T cd05614 122 HKLGIVYRDIKLENILLDSEGH--VVLTDFGLSKEFLSEEKERT----------------------------------YS 165 (332)
T ss_pred HHCCcEecCCCHHHeEECCCCC--EEEeeCcCCccccccCCCcc----------------------------------cc
Confidence 9999999999999999976654 99999999986543221110 01
Q ss_pred CCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccccccCCCHHHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
.+||+.|+|||++.+.. ++.++|||||||++|||++| .+||.... ......+.......+...++++.+||.+
T Consensus 166 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 244 (332)
T cd05614 166 FCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG-ASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHK 244 (332)
T ss_pred ccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcC-CCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 46999999999998654 78999999999999999996 67774321 1111222222233344567899999999
Q ss_pred cccCCCCCCc-----CHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDLRP-----KAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~RP-----Ta~evL~HPff~~~~~ 802 (934)
||+.||++|| +++++++||||.+.+.
T Consensus 245 ~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 245 LLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred HcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999999999 8889999999976543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=366.32 Aligned_cols=282 Identities=22% Similarity=0.282 Sum_probs=194.0
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++. ..+++.||||++.+... ....+|+ .++..++||||+++++.+.+.+.+||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~-~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAER-DILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHH-HHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46778999999999999984 45689999999975321 1223344 4778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 81 E~~~----------gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~lH~~g 121 (363)
T cd05628 81 EFLP----------GGDMMTLLMK-----------------------------KDTLTEEETQFYIAETVLAIDSIHQLG 121 (363)
T ss_pred cCCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9665 3444444321 245678889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhh----ccccccccceeec
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC----ECVFQFGVLFFTV 702 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~t~ 702 (934)
||||||||+|||++.++ .+||+|||+|+.+................. .......... .............
T Consensus 122 ivHrDlKp~NILi~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (363)
T cd05628 122 FIHRDIKPDNLLLDSKG--HVKLSDFGLCTGLKKAHRTEFYRNLNHSLP----SDFTFQNMNSKRKAETWKRNRRQLAFS 195 (363)
T ss_pred eEecCCCHHHeEECCCC--CEEEeeccCccccccccccccccccccccc----ccccccccccccccchhhhcccccccc
Confidence 99999999999997665 499999999987643211000000000000 0000000000 0000000011123
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHH-HHHHhhcccc-cc--cCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERD-ANIVKDRKDL-FL--VEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~-~~i~~~~~~~-~~--~~~~~e~~dLI~~~ 777 (934)
.+||+.|+|||++.+..++.++|||||||++|||++| .+||.... ... ..+....... ++ ...++++++||.+|
T Consensus 196 ~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l 274 (363)
T cd05628 196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG-YPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRF 274 (363)
T ss_pred ccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999996 66775433 222 2333322221 12 23568999999997
Q ss_pred ccCCCC---CCcCHHHHHcCCCCCCccch
Q 002343 778 LDPNPD---LRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 778 L~~DP~---~RPTa~evL~HPff~~~~~~ 803 (934)
+. +|. .||+++|+++||||.+.++.
T Consensus 275 ~~-~~~~r~~r~~~~ei~~hp~f~~~~~~ 302 (363)
T cd05628 275 CC-EWEHRIGAPGVEEIKTNPFFEGVDWE 302 (363)
T ss_pred cC-ChhhcCCCCCHHHHhCCCCCCCCCHH
Confidence 75 444 46899999999999876654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=359.78 Aligned_cols=247 Identities=24% Similarity=0.358 Sum_probs=191.2
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+.. ......|...+....+||||+++++++.+.+.+|+|||||.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~- 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN- 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC-
Confidence 4699999999999854 457899999987532 12344555544445699999999999999999999999654
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++.. ...+++.++..++.||+.||+|||++||+|||
T Consensus 80 ---------~g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrd 121 (316)
T cd05619 80 ---------GGDLMFHIQS-----------------------------CHKFDLPRATFYAAEIICGLQFLHSKGIVYRD 121 (316)
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 4455444421 23457788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 122 ikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (316)
T cd05619 122 LKLDNILLDTDG--HIKIADFGMCKENMLGDAK-----------------------------------TCTFCGTPDYIA 164 (316)
T ss_pred CCHHHEEECCCC--CEEEccCCcceECCCCCCc-----------------------------------eeeecCCccccC
Confidence 999999997665 4999999998753221110 011468999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHH-
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ- 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~- 789 (934)
||++.+..++.++|||||||++|||++| .+||... .......+.......+...+.++++||.+||+.||++||++.
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 243 (316)
T cd05619 165 PEILLGQKYNTSVDWWSFGVLLYEMLIG-QSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKG 243 (316)
T ss_pred HHHHcCCCCCchhhhhhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChH
Confidence 9999998999999999999999999996 6677543 333333333333334445678999999999999999999996
Q ss_pred HHHcCCCCCCccc
Q 002343 790 NVLNHPFFWTADT 802 (934)
Q Consensus 790 evL~HPff~~~~~ 802 (934)
++++||||...++
T Consensus 244 ~l~~h~~~~~~~~ 256 (316)
T cd05619 244 DIRQHPFFREIDW 256 (316)
T ss_pred HHHcCcccCCCCH
Confidence 9999999977654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=361.72 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=190.1
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||+|++.+... ....+|+..+....+||||+++++++.+.+..|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~- 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN- 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC-
Confidence 4699999999999854 5688999999975421 2234555544455689999999999999999999999655
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 80 ---------~~~L~~~~~~-----------------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~D 121 (329)
T cd05618 80 ---------GGDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNYLHERGIIYRD 121 (329)
T ss_pred ---------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 4444443321 24568888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++......... ...+||+.|+|
T Consensus 122 ikp~Nili~~~~~--~kL~DfG~~~~~~~~~~~~-----------------------------------~~~~gt~~y~a 164 (329)
T cd05618 122 LKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDTT-----------------------------------STFCGTPNYIA 164 (329)
T ss_pred CCHHHEEECCCCC--EEEeeCCccccccCCCCcc-----------------------------------ccccCCccccC
Confidence 9999999976654 9999999997532211100 11469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCc----------hhHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----------FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----------~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
||++.+..++.++|||||||++|||++| .+||... .......+.......+...+.++.+||.+||+.|
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g-~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~d 243 (329)
T cd05618 165 PEILRGEDYGFSVDWWALGVLMFEMMAG-RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKD 243 (329)
T ss_pred HHHHcCCCCCCccceecccHHHHHHhhC-CCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999996 6777421 0111222222333344556789999999999999
Q ss_pred CCCCcC------HHHHHcCCCCCCccch
Q 002343 782 PDLRPK------AQNVLNHPFFWTADTR 803 (934)
Q Consensus 782 P~~RPT------a~evL~HPff~~~~~~ 803 (934)
|++||+ +.++++||||+..++.
T Consensus 244 P~~R~~~~~~~~~~~i~~hp~f~~~~~~ 271 (329)
T cd05618 244 PKERLGCHPQTGFADIQGHPFFRNVDWD 271 (329)
T ss_pred HHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 999998 5799999999876543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=364.35 Aligned_cols=280 Identities=26% Similarity=0.372 Sum_probs=197.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.+.. ....++++..++..++||||+++++++.++++.|+|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 477889999999999999855 468999999987532 12233333458888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++.. ...+++..++.++.||+.||+|||++||
T Consensus 82 ~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~gi 122 (350)
T cd05573 82 YMP----------GGDLMNLLIR-----------------------------KDVFPEETARFYIAELVLALDSVHKLGF 122 (350)
T ss_pred CCC----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 664 3444444322 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+++.+................. .......................||+
T Consensus 123 iH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~gt~ 194 (350)
T cd05573 123 IHRDIKPDNILIDADGH--IKLADFGLCKKMNKAKDREYYLNDSHNLL------FRDNVLVRRRDHKQRRVRANSTVGTP 194 (350)
T ss_pred eccCCCHHHeEECCCCC--EEeecCCCCccCcccCccccccccccccc------ccccccccccccccccccccccccCc
Confidence 99999999999976654 99999999987654331100000000000 00000000000000000112256999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccc-cc--cCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDL-FL--VEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~-~~--~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+..++.++|||||||++|||++| .+||.... .... .+..+.... .+ ...++++.+||.+||. ||
T Consensus 195 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp 272 (350)
T cd05573 195 DYIAPEVLRGTPYGLECDWWSLGVILYEMLYG-FPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP 272 (350)
T ss_pred cccCHHHHcCCCCCCceeeEecchhhhhhccC-CCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch
Confidence 99999999999999999999999999999996 66665433 2222 233211111 11 2247899999999997 99
Q ss_pred CCCcC-HHHHHcCCCCCCccc
Q 002343 783 DLRPK-AQNVLNHPFFWTADT 802 (934)
Q Consensus 783 ~~RPT-a~evL~HPff~~~~~ 802 (934)
.+||+ ++++++||||...++
T Consensus 273 ~~R~~s~~~ll~hp~~~~~~~ 293 (350)
T cd05573 273 EDRLGSFEEIKSHPFFKGIDW 293 (350)
T ss_pred hhcCCCHHHHhcCCCcCCCCH
Confidence 99999 999999999976554
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=359.51 Aligned_cols=246 Identities=29% Similarity=0.400 Sum_probs=190.7
Q ss_pred eeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 479 KEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.||+|+||+||++.. ..++.||||++.+... ....+|+ .+++.++||||+++++++.+++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~-~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAER-NILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHH-HHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 5799999999999754 3578999999875321 1223454 47889999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++.. ...+++..+..++.||+.||+|||++||
T Consensus 81 ~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 81 YLS----------GGELFMHLER-----------------------------EGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred CCC----------CchHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 655 4445444422 2345677888999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++......... ...+||+
T Consensus 122 vH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~gt~ 164 (323)
T cd05584 122 IYRDLKPENILLDAQG--HVKLTDFGLCKESIHEGTVT-----------------------------------HTFCGTI 164 (323)
T ss_pred ecCCCCHHHeEECCCC--CEEEeeCcCCeecccCCCcc-----------------------------------cccCCCc
Confidence 9999999999997665 49999999987543221100 1146999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
.|+|||++.+..++.++|||||||++|||++| .+||.... ......+.......+...++++.+||.+||+.||++||
T Consensus 165 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 243 (323)
T cd05584 165 EYMAPEILMRSGHGKAVDWWSLGALMYDMLTG-APPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRL 243 (323)
T ss_pred cccChhhccCCCCCCcceecccHHHHHHHhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcC
Confidence 99999999998899999999999999999996 66775433 22222222222333445678999999999999999999
Q ss_pred -----CHHHHHcCCCCCCccc
Q 002343 787 -----KAQNVLNHPFFWTADT 802 (934)
Q Consensus 787 -----Ta~evL~HPff~~~~~ 802 (934)
+++++++||||....+
T Consensus 244 ~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 244 GAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred CCCCCCHHHHhcCCCcCCCCH
Confidence 8999999999976544
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=360.93 Aligned_cols=248 Identities=28% Similarity=0.414 Sum_probs=194.4
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||.||++... +++.||||++.+... ....+|+. ++..++||||+++++++.+.+..||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERD-ILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHH-HHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 4778899999999999998654 589999999975421 22345554 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 81 e~~~----------g~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ 121 (333)
T cd05600 81 EYVP----------GGDFRTLLNN-----------------------------LGVLSEDHARFYMAEMFEAVDALHELG 121 (333)
T ss_pred eCCC----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9664 4444444421 234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++...... ...+||
T Consensus 122 ivH~dlkp~Nil~~~~~--~~kL~Dfg~a~~~~~~~--------------------------------------~~~~gt 161 (333)
T cd05600 122 YIHRDLKPENFLIDASG--HIKLTDFGLSKGIVTYA--------------------------------------NSVVGS 161 (333)
T ss_pred ccccCCCHHHEEECCCC--CEEEEeCcCCccccccc--------------------------------------CCcccC
Confidence 99999999999997665 49999999998654310 014699
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHH-HHhhcccccc-------cCCCHHHHHHHHHc
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDAN-IVKDRKDLFL-------VEHIPEAVDLFTRL 777 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~-i~~~~~~~~~-------~~~~~e~~dLI~~~ 777 (934)
+.|+|||++.+..++.++|||||||++|||++| .+||.... ..... +......... ...++++.+||.+|
T Consensus 162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~ 240 (333)
T cd05600 162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG-FPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKL 240 (333)
T ss_pred ccccChhHhcCCCCCCccceecchHHHhhhhhC-CCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHH
Confidence 999999999999999999999999999999996 66775433 22222 2221111111 13468999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
|..+|.+||++.++++||||...++
T Consensus 241 l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 241 INDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred hhChhhhcCCHHHHHhCcccCCCCH
Confidence 9999999999999999999987544
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=361.04 Aligned_cols=255 Identities=25% Similarity=0.350 Sum_probs=187.0
Q ss_pred eeeecccCcEEEEEEEEe---cCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yLVmE~c~~ 551 (934)
.++||+|+||+||++... +++.||+|.+..... ....+|+. +++.++||||+++++++.+ +..+|++||++.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIA-LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHH-HHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999998643 568999999875543 34567776 7888999999999998854 5678999999988
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|.+++........ ..+...+++..++.++.||+.||+|||++||+|||
T Consensus 85 ~l~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrD 133 (317)
T cd07868 85 DLWHIIKFHRASKA-------------------------------NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD 133 (317)
T ss_pred CHHHHHHhcccccc-------------------------------cCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCC
Confidence 87776643211100 00123578889999999999999999999999999
Q ss_pred CCCCeEEEecC--CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 632 LKPQNVLISKD--KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 632 LKP~NILl~~d--~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||+|||+..+ ....+||+|||+|+.+......... .....||+.|
T Consensus 134 lkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~--------------------------------~~~~~~t~~y 181 (317)
T cd07868 134 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD--------------------------------LDPVVVTFWY 181 (317)
T ss_pred CCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccc--------------------------------cCCccccccc
Confidence 99999999532 2346999999999876433211110 0114689999
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-----------HHHHHHhh--------------cc----
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-----------RDANIVKD--------------RK---- 759 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----------~~~~i~~~--------------~~---- 759 (934)
+|||++.+. .++.++||||+||++|+|++| .+||..... ....+... ..
T Consensus 182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07868 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST 260 (317)
T ss_pred cCCHHHcCCCCcCchhhHHHHHHHHHHHHhC-CCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhh
Confidence 999999874 589999999999999999996 667642211 00000000 00
Q ss_pred -------c------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 -------D------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 -------~------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
. ........++.|||.+||+.||++|||++|+|+||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 261 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 0001123578999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=358.53 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=192.4
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLVm 546 (934)
|.+.+.||+|+||+||++.. .+++.||||++.+.. .+....|+. ++..+. |++|+++++++.+.+.+|+||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKR-VLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 66789999999999999854 457899999987532 123345555 455555 456899999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 81 E~~~----------~g~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05587 81 EYVN----------GGDLMYHIQQ-----------------------------VGKFKEPHAVFYAAEIAIGLFFLHSKG 121 (324)
T ss_pred cCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9665 3444443321 234577888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++........ ....+||
T Consensus 122 ivH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt 164 (324)
T cd05587 122 IIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKT-----------------------------------TRTFCGT 164 (324)
T ss_pred eEecCCCHHHeEEcCCC--CEEEeecCcceecCCCCCc-----------------------------------eeeecCC
Confidence 99999999999997665 4999999998743211110 0114699
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+.......+...++++.+||.+||+.||.+|
T Consensus 165 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 243 (324)
T cd05587 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKR 243 (324)
T ss_pred ccccChhhhcCCCCCcccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHc
Confidence 999999999999999999999999999999996 67775443 2233333333333445667899999999999999999
Q ss_pred cCH-----HHHHcCCCCCCccch
Q 002343 786 PKA-----QNVLNHPFFWTADTR 803 (934)
Q Consensus 786 PTa-----~evL~HPff~~~~~~ 803 (934)
+++ +++++||||...++.
T Consensus 244 ~~~~~~~~~~~~~hp~~~~~~~~ 266 (324)
T cd05587 244 LGCGPTGERDIREHAFFRRIDWE 266 (324)
T ss_pred CCCCCCCHHHHhcCCCcCCCCHH
Confidence 986 899999999876554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=358.92 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=194.8
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|.+.+.||+|+||+||++.. .+++.||||++.+... .....|...+....+||+|+++++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 56788999999999999854 4678999999875421 1234444434445579999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++.. ...+++.+++.++.||+.||+|||++||
T Consensus 82 ~~~----------~g~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~i 122 (323)
T cd05616 82 YVN----------GGDLMYQIQQ-----------------------------VGRFKEPHAVFYAAEIAIGLFFLHSKGI 122 (323)
T ss_pred CCC----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 654 4444444321 2346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++........ ....+||+
T Consensus 123 vHrDlkp~Nill~~~~--~~kL~DfG~~~~~~~~~~~-----------------------------------~~~~~gt~ 165 (323)
T cd05616 123 IYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVT-----------------------------------TKTFCGTP 165 (323)
T ss_pred EecCCCHHHeEECCCC--cEEEccCCCceecCCCCCc-----------------------------------cccCCCCh
Confidence 9999999999997665 4999999999754321110 01146999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
.|+|||++.+..++.++|||||||++|||++| .+||.... ......+.......+...++++.+||.+||+.||.+|+
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~ 244 (323)
T cd05616 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRL 244 (323)
T ss_pred hhcCHHHhcCCCCCCccchhchhHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcC
Confidence 99999999999999999999999999999996 67775443 33333333333344556788999999999999999999
Q ss_pred CH-----HHHHcCCCCCCccch
Q 002343 787 KA-----QNVLNHPFFWTADTR 803 (934)
Q Consensus 787 Ta-----~evL~HPff~~~~~~ 803 (934)
++ .++++||||...++.
T Consensus 245 ~~~~~~~~~i~~h~~~~~~~~~ 266 (323)
T cd05616 245 GCGPEGERDIKEHAFFRYIDWE 266 (323)
T ss_pred CCCCCCHHHHhcCCCcCCCCHH
Confidence 84 899999999776543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=360.07 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=188.5
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.||+|+||+||++.. .+++.||||++.+... +...+|+. ++..+ +||||+++++++.+.+.+|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~-il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKH-VFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 4699999999999854 5689999999975321 12334544 44444 89999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|..++.. ...+++..++.++.||+.||+|||++||+||
T Consensus 80 ----------~g~L~~~~~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 80 ----------GGDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 3444443321 3457888999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++........ ....+||+.|+
T Consensus 121 dlkp~Nili~~~~--~~kL~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~ 163 (329)
T cd05588 121 DLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDT-----------------------------------TSTFCGTPNYI 163 (329)
T ss_pred CCCHHHeEECCCC--CEEECcCccccccccCCCc-----------------------------------cccccCCcccc
Confidence 9999999997665 4999999998753221110 01146999999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc---------h-hHHHHHHhhcccccccCCCHHHHHHHHHcccC
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES---------F-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~---------~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
|||++.+..++.++|||||||++|+|++| .+||... . ......+.......+...++++.+||.+||+.
T Consensus 164 aPE~~~~~~~~~~~DiwslG~~l~el~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~ 242 (329)
T cd05588 164 APEILRGEDYGFSVDWWALGVLMFEMMAG-RSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNK 242 (329)
T ss_pred CHHHHcCCCCCCccceechHHHHHHHHHC-CCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999996 7777421 0 11122233333333455678999999999999
Q ss_pred CCCCCcC------HHHHHcCCCCCCccc
Q 002343 781 NPDLRPK------AQNVLNHPFFWTADT 802 (934)
Q Consensus 781 DP~~RPT------a~evL~HPff~~~~~ 802 (934)
||.+|++ ++++++||||...++
T Consensus 243 dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 243 DPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred CHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 9999987 789999999976544
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=364.06 Aligned_cols=285 Identities=24% Similarity=0.332 Sum_probs=196.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. ++..++||||+++++++.++++.||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERD-ILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 477889999999999999854 5689999999975321 12234554 788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||.+ |+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 81 E~~~~----------g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~ 121 (364)
T cd05599 81 EYLPG----------GDMMTLLMK-----------------------------KDTFTEEETRFYIAETILAIDSIHKLG 121 (364)
T ss_pred CCCCC----------cHHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 96653 444444321 234678889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhh---HHHHHHHhhhhhhccccccccceeecC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQL---VYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
|+||||||+|||++.++. +||+|||+++.+.................. ..............+............
T Consensus 122 ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (364)
T cd05599 122 YIHRDIKPDNLLLDAKGH--IKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST 199 (364)
T ss_pred eEeccCCHHHeEECCCCC--EEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 999999999999976654 999999999876432211000000000000 000000000000000000000011125
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccc---cCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFL---VEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~---~~~~~e~~dLI~~~L 778 (934)
+||+.|+|||++.+..++.++|||||||++|||++| .+||...... ...+..+...... ...++++++||.+||
T Consensus 200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll 278 (364)
T cd05599 200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG-YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC 278 (364)
T ss_pred ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC-CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHc
Confidence 799999999999999999999999999999999996 6677543322 2233333322221 134689999999999
Q ss_pred cCCCCCCcC---HHHHHcCCCCCCccc
Q 002343 779 DPNPDLRPK---AQNVLNHPFFWTADT 802 (934)
Q Consensus 779 ~~DP~~RPT---a~evL~HPff~~~~~ 802 (934)
. +|.+|++ +.++++||||...++
T Consensus 279 ~-~p~~R~~~~~~~~ll~h~~~~~~~~ 304 (364)
T cd05599 279 C-EAERRLGNNGVNEIKSHPFFKGVDW 304 (364)
T ss_pred c-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 7 9999998 999999999987654
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=359.37 Aligned_cols=247 Identities=25% Similarity=0.314 Sum_probs=191.0
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||+|++.+... ....+|+..+++.++||||+++++++.+.+..|+|||||.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999854 4678999999875321 23345555567889999999999999999999999996653
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
|+|.+++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 81 ----------~~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrD 121 (325)
T cd05602 81 ----------GELFYHLQR-----------------------------ERCFLEPRARFYAAEIASALGYLHSLNIVYRD 121 (325)
T ss_pred ----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 444443321 23456778889999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~Nili~~~~--~~kl~DfG~a~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (325)
T cd05602 122 LKPENILLDSQG--HIVLTDFGLCKENIEHNGT-----------------------------------TSTFCGTPEYLA 164 (325)
T ss_pred CCHHHeEECCCC--CEEEccCCCCcccccCCCC-----------------------------------cccccCCccccC
Confidence 999999997665 4899999999754321110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHH-
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ- 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~- 789 (934)
||++.+..++.++|||||||++|+|++| .+||.. ........+...........++++.+||.+||+.||.+||++.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 165 PEVLHKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred HHHHcCCCCCCccccccccHHHHHHhcC-CCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 9999999999999999999999999996 566654 3333333333333333456678999999999999999999876
Q ss_pred ---HHHcCCCCCCccc
Q 002343 790 ---NVLNHPFFWTADT 802 (934)
Q Consensus 790 ---evL~HPff~~~~~ 802 (934)
++++|+||...++
T Consensus 244 ~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 244 DFMEIKNHIFFSPINW 259 (325)
T ss_pred CHHHHhcCcccCCCCH
Confidence 8999999976544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=363.60 Aligned_cols=257 Identities=23% Similarity=0.352 Sum_probs=194.9
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.+.|.+.+.||+|+||+||++.. .+++.||||++.+.. ....+.++..+++.++||||+++++++.++++.|+|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 35688899999999999999854 568999999986432 112233333488899999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++. ...+++..+..++.||+.||+|||++
T Consensus 122 ~Ey~~----------gg~L~~~l~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~ 161 (370)
T cd05596 122 MEYMP----------GGDLVNLMS------------------------------NYDIPEKWARFYTAEVVLALDAIHSM 161 (370)
T ss_pred EcCCC----------CCcHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99665 344444332 12356778889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++.+........ ...+|
T Consensus 162 ~ivHrDLkp~NILl~~~~--~~kL~DfG~~~~~~~~~~~~~----------------------------------~~~~g 205 (370)
T cd05596 162 GFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMDANGMVRC----------------------------------DTAVG 205 (370)
T ss_pred CeeccCCCHHHEEEcCCC--CEEEEeccceeeccCCCcccC----------------------------------CCCCC
Confidence 999999999999997665 499999999987543221100 11469
Q ss_pred CCccccchhcccC----CCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhccccc-c--cCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLLQG----RQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDLF-L--VEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~~~----~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~~-~--~~~~~e~~dLI~~ 776 (934)
|+.|+|||++.+. .++.++|||||||++|||++| .+||... ..... .+........ + ...+.++++||.+
T Consensus 206 t~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 284 (370)
T cd05596 206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG-DTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICA 284 (370)
T ss_pred CcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC-CCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHH
Confidence 9999999998753 378999999999999999996 6666543 32222 2332222121 2 2357899999999
Q ss_pred cccCCCCC--CcCHHHHHcCCCCCCccchhh
Q 002343 777 LLDPNPDL--RPKAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 777 ~L~~DP~~--RPTa~evL~HPff~~~~~~~~ 805 (934)
||+.+|++ |++++++++||||++.++...
T Consensus 285 ~L~~~p~r~~R~s~~ell~h~~~~~~~~~~~ 315 (370)
T cd05596 285 FLTDREVRLGRNGVDEIKSHPFFKNDQWTFD 315 (370)
T ss_pred HccChhhccCCCCHHHHhcCcccCCCChhhH
Confidence 99999988 999999999999987665433
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=350.59 Aligned_cols=291 Identities=23% Similarity=0.262 Sum_probs=208.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEec-CcEEEEEEeecCChhH-----HHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~~~-----~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
+.|++.+.||+|.-|+||++.... +..+|+|++.+..... ...-++.+++.++||.++.||..++.+++.|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345667899999999999986654 5899999998754321 1122345889999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||.| |+|...++.. ..+.++++.++.++.+|+.||+|||-.|
T Consensus 157 eyCpG----------GdL~~LrqkQ---------------------------p~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 157 EYCPG----------GDLHSLRQKQ---------------------------PGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred ecCCC----------ccHHHHHhhC---------------------------CCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 99985 3333322210 1355789999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCC---CCc-chhh----H-----HHHHHHh--h------
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA---TGM-DLQL----V-----YLVSILL--K------ 685 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~---~~~-~~~~----~-----~~~~~~~--~------ 685 (934)
||.|||||+||||.++|+ +.|+||.|+.............. ... .... . ....... +
T Consensus 200 ivYRDLKPENILvredGH--IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~ 277 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGH--IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESAS 277 (459)
T ss_pred eeeccCCcceeEEecCCc--EEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccc
Confidence 999999999999988876 89999999987632111110000 000 0000 0 0000000 0
Q ss_pred hhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhccccccc
Q 002343 686 LVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLV 764 (934)
Q Consensus 686 ~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~ 764 (934)
....+-+...........+||-.|.|||++.+...+.++|+|+|||++|||+.|..|+-|..... ..+++... ..++.
T Consensus 278 ~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~-l~Fp~ 356 (459)
T KOG0610|consen 278 RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQP-LKFPE 356 (459)
T ss_pred ccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCC-CcCCC
Confidence 00001112222333445789999999999999999999999999999999999744444544433 34555433 22222
Q ss_pred --CCCHHHHHHHHHcccCCCCCCcC----HHHHHcCCCCCCccch
Q 002343 765 --EHIPEAVDLFTRLLDPNPDLRPK----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 765 --~~~~e~~dLI~~~L~~DP~~RPT----a~evL~HPff~~~~~~ 803 (934)
..+..++|||+++|.+||.+|.. |.||.+||||.+.+|.
T Consensus 357 ~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 357 EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence 34579999999999999999998 9999999999999887
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=364.32 Aligned_cols=285 Identities=25% Similarity=0.328 Sum_probs=193.8
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|...+.||+|+||+||++. ..+++.||||++.+... ....+|+ .+++.++|||||++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~-~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAER-DILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHH-HHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 46778999999999999984 45689999999975421 1233444 4788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 81 E~~~----------gg~L~~~l~~-----------------------------~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 81 DYIP----------GGDMMSLLIR-----------------------------MEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred ecCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9665 3444444322 234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhH--HHHHHHhhhhhhc-----------ccc
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLV--YLVSILLKLVICE-----------CVF 693 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------~~~ 693 (934)
||||||||+|||++.++ ++||+|||+++.+............ ...... ...........|. ...
T Consensus 122 ivHrDlKp~Nili~~~~--~~kL~DFGl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (381)
T cd05626 122 FIHRDIKPDNILIDLDG--HIKLTDFGLCTGFRWTHNSKYYQKG-SHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATK 198 (381)
T ss_pred eeecCCcHHHEEECCCC--CEEEeeCcCCccccccccccccccc-ccccccccCcccccccccccccccccchhhccccc
Confidence 99999999999997665 4999999998765322110000000 000000 0000000000000 000
Q ss_pred ccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhccccc---ccCCCH
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLF---LVEHIP 768 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~---~~~~~~ 768 (934)
..........+||+.|+|||++.+..++.++|||||||++|||++| .+||...... ...++.+..... ....++
T Consensus 199 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 277 (381)
T cd05626 199 QHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVG-QPPFLAPTPTETQLKVINWENTLHIPPQVKLSP 277 (381)
T ss_pred cccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhC-CCCCcCCCHHHHHHHHHccccccCCCCCCCCCH
Confidence 0000011235799999999999998999999999999999999996 6677543322 223333222211 123578
Q ss_pred HHHHHHHHcc--cCCCCCCcCHHHHHcCCCCCCccc
Q 002343 769 EAVDLFTRLL--DPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 769 e~~dLI~~~L--~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
++++||.+|+ ..+|..|++++++++||||...++
T Consensus 278 ~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 278 EAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcCcccCCCCh
Confidence 9999999965 445556999999999999977554
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=362.73 Aligned_cols=247 Identities=28% Similarity=0.395 Sum_probs=188.8
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
.+.++|.+.+.||+|+||+||++. ..+|+.||||++.... .....+|+. +++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHH-HHHhCCCCCEeeeeeeeccCCCcc
Confidence 345779999999999999999984 4568999999986432 233456665 778899999999999986543
Q ss_pred ---eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 541 ---~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..|+|||||+++|.+.+. ..+++..+..++.||+.
T Consensus 97 ~~~~~~lv~e~~~~~l~~~~~------------------------------------------~~~~~~~~~~~~~qi~~ 134 (359)
T cd07876 97 EFQDVYLVMELMDANLCQVIH------------------------------------------MELDHERMSYLLYQMLC 134 (359)
T ss_pred ccceeEEEEeCCCcCHHHHHh------------------------------------------ccCCHHHHHHHHHHHHH
Confidence 579999988876554431 12456778899999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++. +||+|||+++.......
T Consensus 135 ~L~~LH~~~ivHrDlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~---------------------------------- 178 (359)
T cd07876 135 GIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFM---------------------------------- 178 (359)
T ss_pred HHHHHHhCCcccCCCCHHHEEECCCCC--EEEecCCCccccccCcc----------------------------------
Confidence 999999999999999999999976654 99999999975432211
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-----------------------H
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-----------------------N 753 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-----------------------~ 753 (934)
.+...||+.|+|||++.+..++.++|||||||++|+|++| .+||....... . .
T Consensus 179 --~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 179 --MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG-SVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred --CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 0114689999999999999999999999999999999996 67775432110 0 0
Q ss_pred HHhhcccc-------------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 754 IVKDRKDL-------------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 754 i~~~~~~~-------------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
........ .....++++++||.+||+.||++|||+.|+|+||||.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 00000000 0001246789999999999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=357.69 Aligned_cols=248 Identities=25% Similarity=0.343 Sum_probs=191.5
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+.. .....+|+..+....+||||+++++++.+.+.+|+|||||.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999854 458899999997532 123345555333344899999999999999999999996653
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
|+|..++.. ...+++.++..++.||+.||+|||+++|+|||
T Consensus 81 ----------~~L~~~~~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 81 ----------GDLMFHIQR-----------------------------SGRFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred ----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 444333321 23568889999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~g~~~y~a 164 (318)
T cd05570 122 LKLDNVLLDSEG--HIKIADFGMCKEGILGGVT-----------------------------------TSTFCGTPDYIA 164 (318)
T ss_pred CCHHHeEECCCC--cEEecccCCCeecCcCCCc-----------------------------------ccceecCccccC
Confidence 999999997665 4999999998753221110 011468999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH--
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
||++.+..++.++|||||||++|+|++| ..||... .......+.......+...++++.+||.+||+.||++||++
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~~l~~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~ 243 (318)
T cd05570 165 PEILSYQPYGPAVDWWALGVLLYEMLAG-QSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLP 243 (318)
T ss_pred HHHhcCCCCCcchhhhhHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCC
Confidence 9999999999999999999999999996 6677543 33333333333344445567899999999999999999999
Q ss_pred ---HHHHcCCCCCCccch
Q 002343 789 ---QNVLNHPFFWTADTR 803 (934)
Q Consensus 789 ---~evL~HPff~~~~~~ 803 (934)
.++++||||...++.
T Consensus 244 ~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 244 TGEQDIKGHPFFREIDWD 261 (318)
T ss_pred CCHHHHhcCCCcCCCCHH
Confidence 999999999776543
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=357.36 Aligned_cols=248 Identities=25% Similarity=0.319 Sum_probs=192.0
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+|+.||+|++.+... ....+|+..+++.++||||+++++++.+.+..|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999855 5689999999865321 23445655577889999999999999999999999996654
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
|+|..++.. ...+++.++..++.||+.||+|||++||+|||
T Consensus 81 ----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~D 121 (321)
T cd05603 81 ----------GELFFHLQR-----------------------------ERCFLEPRARFYAAEVASAIGYLHSLNIIYRD 121 (321)
T ss_pred ----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 444333321 23457788889999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (321)
T cd05603 122 LKPENILLDSQGH--VVLTDFGLCKEGVEPEET-----------------------------------TSTFCGTPEYLA 164 (321)
T ss_pred CCHHHeEECCCCC--EEEccCCCCccCCCCCCc-----------------------------------cccccCCcccCC
Confidence 9999999976654 999999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH--
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
||++.+..++.++|||||||++|||++| .+||.. ........+.......+...+.++.++|.+||+.||.+||++
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (321)
T cd05603 165 PEVLRKEPYDRTVDWWCLGAVLYEMLYG-LPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKA 243 (321)
T ss_pred HHHhcCCCCCCcCcccccchhhhhhhcC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCC
Confidence 9999998999999999999999999997 556644 333333333333333445567899999999999999999875
Q ss_pred --HHHHcCCCCCCccch
Q 002343 789 --QNVLNHPFFWTADTR 803 (934)
Q Consensus 789 --~evL~HPff~~~~~~ 803 (934)
.++++||||...++.
T Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 244 DFLEIKNHVFFSPINWD 260 (321)
T ss_pred CHHHHhCCCCcCCCCHH
Confidence 599999999765543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=361.93 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=192.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
..+.|.+.+.||+|+||+||++.. .+++.||+|.+.+.. ....+.++..+++.++||||+++++++.+++.+|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 346688899999999999999855 468899999986421 12233444458889999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||. +|+|.+++. ...+++.+++.++.||+.||+|||+
T Consensus 121 v~Ey~~----------gg~L~~~l~------------------------------~~~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 121 VMEYMP----------GGDLVNLMS------------------------------NYDVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred EEcCCC----------CCcHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999665 344444432 1235677889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+|+.+....... ....+
T Consensus 161 ~~IvHrDLKp~NILl~~~~--~~kL~DFG~a~~~~~~~~~~----------------------------------~~~~~ 204 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGMVR----------------------------------CDTAV 204 (370)
T ss_pred CCeEecCCCHHHEEECCCC--CEEEEecccceecccCCcee----------------------------------cccCC
Confidence 9999999999999997665 49999999998764321100 01146
Q ss_pred CCCccccchhcccCC----CcccccccchhhhhHHhhcCCCCCCCC-chhHHH-HHHhhccccc-c--cCCCHHHHHHHH
Q 002343 705 GSSGWQAPEQLLQGR----QTRAIDLFSLGCILFFCITGGKHPYGE-SFERDA-NIVKDRKDLF-L--VEHIPEAVDLFT 775 (934)
Q Consensus 705 GT~~Y~APE~l~~~~----~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~-~i~~~~~~~~-~--~~~~~e~~dLI~ 775 (934)
||+.|||||++.+.. ++.++|||||||++|||++| .+||.. ...... .+........ + ...+..+++||.
T Consensus 205 gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~ 283 (370)
T cd05621 205 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG-DTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLIC 283 (370)
T ss_pred CCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHH
Confidence 999999999997643 78999999999999999996 566644 332222 2332222111 1 234788999999
Q ss_pred HcccCCCCC--CcCHHHHHcCCCCCCccc
Q 002343 776 RLLDPNPDL--RPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 776 ~~L~~DP~~--RPTa~evL~HPff~~~~~ 802 (934)
+||..++.+ |+++.++++||||....+
T Consensus 284 ~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 284 AFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred HHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 999865543 899999999999976543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=357.86 Aligned_cols=253 Identities=26% Similarity=0.356 Sum_probs=194.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.+... ...++++..+++..+||||+++++++.+.+..|||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 477889999999999999854 5789999999975422 2234444558888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++... ...+++..++.++.||+.||+|||+++|
T Consensus 82 ~~~----------~~~L~~~l~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~i 123 (330)
T cd05601 82 YQP----------GGDLLSLLNRY----------------------------EDQFDEDMAQFYLAELVLAIHSVHQMGY 123 (330)
T ss_pred CCC----------CCCHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 664 44454444321 2356788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+|+.+....... .....||+
T Consensus 124 ~H~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~~~~----------------------------------~~~~~gt~ 167 (330)
T cd05601 124 VHRDIKPENVLIDRTGH--IKLADFGSAARLTANKMVN----------------------------------SKLPVGTP 167 (330)
T ss_pred EcccCchHheEECCCCC--EEeccCCCCeECCCCCcee----------------------------------eecccCCc
Confidence 99999999999976654 9999999998765432211 01146899
Q ss_pred ccccchhcc------cCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccc-c--ccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLL------QGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDL-F--LVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~------~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~-~--~~~~~~e~~dLI~~ 776 (934)
.|+|||++. ...++.++|||||||++|||++| ..||... ..... .+....... + ....++++.+||.+
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 246 (330)
T cd05601 168 DYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYG-RSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQS 246 (330)
T ss_pred cccCHHHhccccccccCCCCCcceeecccceeeeeccC-CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHH
Confidence 999999987 45678999999999999999996 6676543 22222 222222111 1 12356899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||+ ||++||+++++++||||...++
T Consensus 247 ll~-~p~~R~t~~~l~~h~~~~~~~~ 271 (330)
T cd05601 247 LLC-GQKERLGYEGLCCHPFFSKIDW 271 (330)
T ss_pred Hcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence 998 9999999999999999976543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=333.96 Aligned_cols=248 Identities=26% Similarity=0.383 Sum_probs=203.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+++.||+|-||.||++.. .++..||+|++.+.+. .+..+|+. +.+.++||||+++|++|.|...+||+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiE-Iqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIE-IQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeE-eecccCCccHHhhhhheeccceeEEE
Confidence 3467789999999999999855 5678999999977643 23445554 78899999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
+| |...|.+...|.+. +...+.+.....+++|+|.||.|+|.+
T Consensus 101 lE----------ya~~gel~k~L~~~---------------------------~~~~f~e~~~a~Yi~q~A~Al~y~h~k 143 (281)
T KOG0580|consen 101 LE----------YAPRGELYKDLQEG---------------------------RMKRFDEQRAATYIKQLANALLYCHLK 143 (281)
T ss_pred EE----------ecCCchHHHHHHhc---------------------------ccccccccchhHHHHHHHHHHHHhccC
Confidence 99 77788888777532 123456677889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+||||||||+|+|++.++. .||+|||-+..-+.+. ..+.||
T Consensus 144 ~VIhRdiKpenlLlg~~~~--lkiAdfGwsV~~p~~k-------------------------------------R~tlcg 184 (281)
T KOG0580|consen 144 RVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSNK-------------------------------------RKTLCG 184 (281)
T ss_pred CcccCCCCHHHhccCCCCC--eeccCCCceeecCCCC-------------------------------------ceeeec
Confidence 9999999999999987765 8999999987543211 112689
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|..|.+||+..+..++..+|+|++|++.||++.| .+||....... ...+......++...+.++.|||.+||..+|.+
T Consensus 185 t~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg-~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~ 263 (281)
T KOG0580|consen 185 TLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVG-LPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIE 263 (281)
T ss_pred ccccCCHhhcCCCCccchhhHHHHHHHHHHHHhc-CCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999996 77886554332 333333334445667789999999999999999
Q ss_pred CcCHHHHHcCCCCC
Q 002343 785 RPKAQNVLNHPFFW 798 (934)
Q Consensus 785 RPTa~evL~HPff~ 798 (934)
|.+..|++.|||+.
T Consensus 264 r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 264 RLALTEVMDHPWIV 277 (281)
T ss_pred cccHHHHhhhHHHH
Confidence 99999999999984
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=363.84 Aligned_cols=285 Identities=28% Similarity=0.388 Sum_probs=193.0
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++. ..+|+.||||++.+... +...+|+. +++.++|||||++++++.+.+++||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERD-VLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46778999999999999984 46789999999865321 12334554 778899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++..++.++.|++.||+|||++|
T Consensus 81 E~~~----------gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~ql~~aL~~LH~~g 121 (377)
T cd05629 81 EFLP----------GGDLMTMLIK-----------------------------YDTFSEDVTRFYMAECVLAIEAVHKLG 121 (377)
T ss_pred eCCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9665 3444444321 234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCccccc------CCCC--cchhhHHHH-HHHhhhhhhccccccc-
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ------NATG--MDLQLVYLV-SILLKLVICECVFQFG- 696 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~------~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~g- 696 (934)
|+||||||+|||++.++ .+||+|||+|+.+......... .... ......... ...............+
T Consensus 122 ivHrDlkp~NIll~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (377)
T cd05629 122 FIHRDIKPDNILIDRGG--HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKK 199 (377)
T ss_pred eeccCCCHHHEEECCCC--CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 99999999999997665 4999999999754321110000 0000 000000000 0000000000000000
Q ss_pred --cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhccccccc---CCCHH
Q 002343 697 --VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFLV---EHIPE 769 (934)
Q Consensus 697 --~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~~---~~~~e 769 (934)
.......+||+.|+|||++.+..++.++|||||||++|||++| .+||...... ...+..+......+ ..+++
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 278 (377)
T cd05629 200 NRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIG-WPPFCSENSHETYRKIINWRETLYFPDDIHLSVE 278 (377)
T ss_pred cccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcC-CCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHH
Confidence 0011125799999999999999999999999999999999996 6777543322 22333322222222 34689
Q ss_pred HHHHHHHcccCCCCCC---cCHHHHHcCCCCCCccc
Q 002343 770 AVDLFTRLLDPNPDLR---PKAQNVLNHPFFWTADT 802 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~R---PTa~evL~HPff~~~~~ 802 (934)
+++||.+||. +|.+| +++.++++||||.+.++
T Consensus 279 ~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 279 AEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred HHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 9999999998 77765 59999999999976543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=362.60 Aligned_cols=254 Identities=20% Similarity=0.314 Sum_probs=195.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE---ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN---YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~---~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+...|.+.+.||+|+||+||++.. ..++.||||.+.... ...+|+. +++.++|||||++++++...+..|+||
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~-il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREID-ILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHH-HHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 4556799999999999999999743 346789999886542 3456766 778899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|.++|.+++. ....+++.+++.++.||+.||+|||++|
T Consensus 166 e~~~~~l~~~l~----------------------------------------~~~~l~~~~~~~i~~ql~~aL~~LH~~g 205 (392)
T PHA03207 166 PKYKCDLFTYVD----------------------------------------RSGPLPLEQAITIQRRLLEALAYLHGRG 205 (392)
T ss_pred hhcCCCHHHHHH----------------------------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 988766555441 1244678889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+|||++.++. +||+|||+++.+......... ....||
T Consensus 206 ivHrDlkp~Nill~~~~~--~~l~DfG~a~~~~~~~~~~~~---------------------------------~~~~gt 250 (392)
T PHA03207 206 IIHRDVKTENIFLDEPEN--AVLGDFGAACKLDAHPDTPQC---------------------------------YGWSGT 250 (392)
T ss_pred ccccCCCHHHEEEcCCCC--EEEccCccccccCcccccccc---------------------------------cccccc
Confidence 999999999999976654 999999999876543211100 114699
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh----HHHHHHhhc------------------------
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE----RDANIVKDR------------------------ 758 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~----~~~~i~~~~------------------------ 758 (934)
+.|+|||++.+..++.++|||||||++|||++|+.++++.... ....+++..
T Consensus 251 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (392)
T PHA03207 251 LETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAI 330 (392)
T ss_pred cCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcc
Confidence 9999999999999999999999999999999986666554321 111111100
Q ss_pred ---ccccc------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 759 ---KDLFL------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 759 ---~~~~~------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
..... .....++.+||.+||..||++|||+.|+|+||||....
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 331 VLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred cccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 00000 11245788999999999999999999999999996543
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=362.49 Aligned_cols=286 Identities=25% Similarity=0.339 Sum_probs=195.2
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|...+.||+|+||+||++.. .+++.||||++.+... ....+|+ .+++.++|||||++++++.+++.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~-~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAER-DILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHH-HHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 477889999999999999854 5688999999875421 1233444 4788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||.+ |+|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 81 E~~~g----------g~L~~~l~~-----------------------------~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 81 DYIPG----------GDMMSLLIR-----------------------------MGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred eCCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 96653 444443321 234577888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHH-HHHHHhhhhhhccc-----------cc
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVY-LVSILLKLVICECV-----------FQ 694 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~ 694 (934)
||||||||+|||++.++. +||+|||+|+.+.................... ..........|.+. ..
T Consensus 122 ivHrDlKp~NILl~~~g~--~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (382)
T cd05625 122 FIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQ 199 (382)
T ss_pred eecCCCCHHHEEECCCCC--EEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 999999999999977664 99999999875432111000000000000000 00000000000000 00
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhccccc---ccCCCHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKDLF---LVEHIPE 769 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~~~---~~~~~~e 769 (934)
.........+||+.|+|||++.+..++.++|||||||++|||++| .+||..... ....+........ ....+++
T Consensus 200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 278 (382)
T cd05625 200 HQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG-QPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPE 278 (382)
T ss_pred cccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhC-CCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHH
Confidence 000011235799999999999999999999999999999999996 677754332 2233333222221 2345789
Q ss_pred HHHHHHHcccCCCCCCcC---HHHHHcCCCCCCccch
Q 002343 770 AVDLFTRLLDPNPDLRPK---AQNVLNHPFFWTADTR 803 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~RPT---a~evL~HPff~~~~~~ 803 (934)
+.+||.+|+ .+|.+|++ ++++++||||...+..
T Consensus 279 ~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 279 ASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 999999986 59999987 9999999999775543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=354.14 Aligned_cols=255 Identities=24% Similarity=0.350 Sum_probs=185.6
Q ss_pred eeeecccCcEEEEEEEEe---cCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yLVmE~c~~ 551 (934)
..+||+|+||+||++... +++.||+|.+...... ...+|+. +++.++||||+++++++.. +...|+|||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIA-LLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHH-HHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 467999999999998654 4578999998765433 4456665 7888999999999998854 5689999999998
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|.+++........ ......+++..++.++.||+.||+|||+++|+|||
T Consensus 85 ~l~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~D 133 (317)
T cd07867 85 DLWHIIKFHRASKA-------------------------------NKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRD 133 (317)
T ss_pred cHHHHHHhhhcccc-------------------------------CCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCC
Confidence 87776632211000 00123468888999999999999999999999999
Q ss_pred CCCCeEEEecC--CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 632 LKPQNVLISKD--KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 632 LKP~NILl~~d--~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||+|||+..+ ....+||+|||+|+........... .....||+.|
T Consensus 134 lkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~--------------------------------~~~~~~t~~y 181 (317)
T cd07867 134 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD--------------------------------LDPVVVTFWY 181 (317)
T ss_pred CCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccc--------------------------------cCcceecccc
Confidence 99999999532 2336999999999876543211110 0114689999
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-----------HHHHHh--------------hcc----
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-----------DANIVK--------------DRK---- 759 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-----------~~~i~~--------------~~~---- 759 (934)
+|||++.+. .++.++|||||||++|||+|| .+||....+. ...+.. ...
T Consensus 182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07867 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPT 260 (317)
T ss_pred cCcHHhcCCCccCcHHHHHhHHHHHHHHHhC-CCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchh
Confidence 999999764 579999999999999999996 6676432110 000000 000
Q ss_pred -------------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 -------------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 -------------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
..........+.+||.+||+.||.+|||+.|+|+||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 261 LQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00001123568899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=347.54 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=189.4
Q ss_pred ecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||+|+||+||++. ..+|+.||||.+.+... +....|+. +++.++||||+++++++..++..|+|||||.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~--- 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKR-ILAKVHSRFIVSLAYAFQTKTDLCLVMTIMN--- 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHH-HHHhCCCCcEeeeeEEEcCCCeEEEEEeCCC---
Confidence 7999999999974 45789999999865422 22334554 7888999999999999999999999999655
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|..++..... ....+++.+++.++.||+.||+|||+++|+|||||
T Consensus 77 -------~g~L~~~~~~~~~-------------------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 124 (280)
T cd05608 77 -------GGDLRYHIYNVDE-------------------------ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLK 124 (280)
T ss_pred -------CCCHHHHHHhccc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 4444433321100 12357888999999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++ .+||+|||+++.+....... ....||+.|+|||
T Consensus 125 p~Nili~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~g~~~y~aPE 167 (280)
T cd05608 125 PENVLLDNDG--NVRISDLGLAVELKDGQSKT-----------------------------------KGYAGTPGFMAPE 167 (280)
T ss_pred HHHEEECCCC--CEEEeeCccceecCCCCccc-----------------------------------cccCCCcCccCHH
Confidence 9999997655 48999999998664432110 0145899999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--H---HHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc--
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--D---ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP-- 786 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~---~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP-- 786 (934)
++.+..++.++|||||||++|||++| ..||...... . ...+.......+...++++.+|+.+||+.||++||
T Consensus 168 ~~~~~~~~~~~DvwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 168 LLQGEEYDFSVDYFALGVTLYEMIAA-RGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHhC-CCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 99999999999999999999999996 7777543211 1 11111112222345678999999999999999999
Q ss_pred ---CHHHHHcCCCCCCccc
Q 002343 787 ---KAQNVLNHPFFWTADT 802 (934)
Q Consensus 787 ---Ta~evL~HPff~~~~~ 802 (934)
+++++++||||....+
T Consensus 247 ~~~~~~~~l~h~~~~~~~~ 265 (280)
T cd05608 247 RDGNCDGLRTHPLFRDLNW 265 (280)
T ss_pred CCCCHHHHhcChhhhcCCH
Confidence 8899999999976543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=351.57 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=192.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+++.||+|++..... ....+|+. +++.++||||+++++++.+++..|+|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVS-LLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHH-HHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 4578889999999999999844 5688999999864322 24456665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.++|.+++... ...+++.+++.++.||+.||+|||++||
T Consensus 85 ~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (309)
T cd07872 85 YLDKDLKQYMDDC---------------------------------------GNIMSMHNVKIFLYQILRGLAYCHRRKV 125 (309)
T ss_pred CCCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8887665554211 1235677888999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++......... ....||+
T Consensus 126 vH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 168 (309)
T cd07872 126 LHRDLKPQNLLINERG--ELKLADFGLARAKSVPTKTY-----------------------------------SNEVVTL 168 (309)
T ss_pred ecCCCCHHHEEECCCC--CEEECccccceecCCCcccc-----------------------------------ccccccc
Confidence 9999999999997665 49999999997643321110 0135789
Q ss_pred ccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh----------------------cccc--
Q 002343 708 GWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD----------------------RKDL-- 761 (934)
Q Consensus 708 ~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~----------------------~~~~-- 761 (934)
.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .....+.. ....
T Consensus 169 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (309)
T cd07872 169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASG-RPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYK 247 (309)
T ss_pred cccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccC
Confidence 9999999875 4579999999999999999996 667754321 11111100 0000
Q ss_pred ------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 762 ------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 762 ------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
.....++++++||.+||+.||.+|||+.|+++||||.....+
T Consensus 248 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~ 295 (309)
T cd07872 248 PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR 295 (309)
T ss_pred CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence 011345789999999999999999999999999999765544
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=361.37 Aligned_cols=247 Identities=25% Similarity=0.381 Sum_probs=188.2
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~----- 539 (934)
+.++|.+.+.||+|+||+||++. ...++.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHH-HHHhcCCCCccccceeecccccccc
Confidence 45679999999999999999984 45688999999865321 23455655 78889999999999987653
Q ss_pred -CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 -~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
...|+|||||+++|.+.+. ..+++..+..++.||+.|
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~------------------------------------------~~~~~~~~~~~~~qi~~a 138 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQ------------------------------------------MELDHERMSYLLYQMLCG 138 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHH------------------------------------------hcCCHHHHHHHHHHHHHH
Confidence 3589999998877655441 124566788999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+|+.......
T Consensus 139 L~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~----------------------------------- 181 (364)
T cd07875 139 IKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFM----------------------------------- 181 (364)
T ss_pred HHHHhhCCeecCCCCHHHEEECCCC--cEEEEeCCCccccCCCCc-----------------------------------
Confidence 9999999999999999999997665 499999999976533211
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHh--------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVK-------------------- 756 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~-------------------- 756 (934)
.+...||+.|+|||++.+..++.++|||||||++|+|++| ..||..... ... .++.
T Consensus 182 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (364)
T cd07875 182 -MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG-GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259 (364)
T ss_pred -ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHH
Confidence 0114689999999999999999999999999999999996 666643221 111 1110
Q ss_pred --hcccc-------------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 757 --DRKDL-------------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 757 --~~~~~-------------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
..+.. .......++++||.+||+.||.+|||+.++|+||||..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 00000 00012357899999999999999999999999999953
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=354.57 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=192.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+|..||+|.+..... ....+|++ +++.++||||+++++++.+++..|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQ-VLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHH-HHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 5688889999999999999854 4688999999865422 23455665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-G 626 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-g 626 (934)
||+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +
T Consensus 84 ~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~ 124 (331)
T cd06649 84 HMD----------GGSLDQVLKE-----------------------------AKRIPEEILGKVSIAVLRGLAYLREKHQ 124 (331)
T ss_pred cCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 555 4455444432 23467788899999999999999986 6
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++. +||+|||+++.+..... ....||
T Consensus 125 ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~-------------------------------------~~~~g~ 165 (331)
T cd06649 125 IMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMA-------------------------------------NSFVGT 165 (331)
T ss_pred EEcCCCChhhEEEcCCCc--EEEccCccccccccccc-------------------------------------ccCCCC
Confidence 999999999999976654 89999999976543211 014589
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHh-----------------------------
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVK----------------------------- 756 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~----------------------------- 756 (934)
+.|+|||++.+..++.++|||||||++|||++| ..||........ .++.
T Consensus 166 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (331)
T cd06649 166 RSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG-RYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHG 244 (331)
T ss_pred cCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccc
Confidence 999999999998999999999999999999996 667653222111 1110
Q ss_pred ------------------hc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 757 ------------------DR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 757 ------------------~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.. +.......++++++||.+||+.||++|||+.++++||||...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 245 MDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 00 0001112457899999999999999999999999999996543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=345.49 Aligned_cols=247 Identities=28% Similarity=0.393 Sum_probs=185.7
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHH--HHHhCCCCceeEEEEEEec-----CC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQN--LIASDQHPNIVRWYGVESD-----QD 540 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~--ll~~l~HpNIV~l~g~~~~-----~~ 540 (934)
+|.+.+.||+|+||+||++.. .+|+.||+|.+..... ....+|+.. .+..++||||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 367788999999999999854 4689999998864321 234455542 2334589999999998765 34
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..+++||+|.++|.+++.. . ...++++.+++.++.||+.||+
T Consensus 81 ~~~lv~e~~~~~l~~~~~~-----------~---------------------------~~~~~~~~~~~~~~~qi~~al~ 122 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDK-----------V---------------------------PPPGLPAETIKDLMRQFLRGLD 122 (288)
T ss_pred eEEEEEcccccCHHHHHHh-----------c---------------------------CCCCCCHHHHHHHHHHHHHHHH
Confidence 6899999887766555421 0 1234688899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++. +||+|||+++.+......
T Consensus 123 ~lH~~~ivH~dikp~Nili~~~~~--~kl~dfg~~~~~~~~~~~------------------------------------ 164 (288)
T cd07863 123 FLHANCIVHRDLKPENILVTSGGQ--VKLADFGLARIYSCQMAL------------------------------------ 164 (288)
T ss_pred HHHhCCeecCCCCHHHEEECCCCC--EEECccCccccccCcccC------------------------------------
Confidence 999999999999999999976654 899999999865432110
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhc---------c------c---
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDR---------K------D--- 760 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~---------~------~--- 760 (934)
+...||..|+|||++.+..++.++|||||||++|+|++| .+||...... .. .+.... . .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T cd07863 165 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFS 243 (288)
T ss_pred CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC-CcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccC
Confidence 114589999999999998999999999999999999985 6777543221 11 111100 0 0
Q ss_pred --------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 --------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 --------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
...+..+.++.+||.+||+.||++|||+.+++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 244 PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0012345678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=357.36 Aligned_cols=246 Identities=26% Similarity=0.308 Sum_probs=185.0
Q ss_pred ecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhC--CCCceeEEEEEEecCCeEEEEEecccC
Q 002343 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASD--QHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 481 IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l--~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
||+|+||+||++.. .+++.||||++.+... ....+|...+.... +||||+++++++.+.+..|+|||||.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~- 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS- 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC-
Confidence 79999999999854 5689999999865321 12233444333333 79999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++..++.++.||+.||+|||++||+|||
T Consensus 80 ---------~g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qil~al~~LH~~~ivHrD 121 (330)
T cd05586 80 ---------GGELFWHLQK-----------------------------EGRFSEDRAKFYIAELVLALEHLHKYDIVYRD 121 (330)
T ss_pred ---------CChHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 3444443321 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++......... ...+||+.|+|
T Consensus 122 lkp~Nili~~~~~--~kl~Dfg~a~~~~~~~~~~-----------------------------------~~~~gt~~y~a 164 (330)
T cd05586 122 LKPENILLDATGH--IALCDFGLSKANLTDNKTT-----------------------------------NTFCGTTEYLA 164 (330)
T ss_pred CCHHHeEECCCCC--EEEecCCcCcCCCCCCCCc-----------------------------------cCccCCccccC
Confidence 9999999976654 8999999987543221100 11469999999
Q ss_pred chhcccC-CCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCc--
Q 002343 712 PEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRP-- 786 (934)
Q Consensus 712 PE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RP-- 786 (934)
||++.+. .++.++|||||||++|+|++| .+||.. ........+... ........++++.+||.+||+.||++||
T Consensus 165 PE~~~~~~~~~~~~DvwslGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 165 PEVLLDEKGYTKHVDFWSLGVLVFEMCCG-WSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHcCCCCCCCccceeccccEEEEeccC-CCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCC
Confidence 9999765 479999999999999999997 555543 333333323222 2222233578999999999999999998
Q ss_pred --CHHHHHcCCCCCCccch
Q 002343 787 --KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 --Ta~evL~HPff~~~~~~ 803 (934)
++.++++||||...++.
T Consensus 244 ~~~~~~ll~h~~~~~~~~~ 262 (330)
T cd05586 244 HRDAVELKEHPFFADIDWD 262 (330)
T ss_pred CCCHHHHhcCccccCCCHH
Confidence 79999999999876543
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=354.33 Aligned_cols=247 Identities=28% Similarity=0.367 Sum_probs=192.0
Q ss_pred eeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 479 KEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++||||+++++++.+++..|+|||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERD-ILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHH-HHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999998743 3588999999975321 22345554 788899999999999999999999999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. +|+|.+++.. ...+++.+++.++.||+.||+|||++||+|
T Consensus 81 ~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 81 R----------GGDLFTRLSK-----------------------------EVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred C----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 4 3444444321 234678899999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++........ ....+||+.|
T Consensus 122 ~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~-----------------------------------~~~~~g~~~y 164 (318)
T cd05582 122 RDLKPENILLDEEG--HIKLTDFGLSKESIDHEKK-----------------------------------AYSFCGTVEY 164 (318)
T ss_pred CCCCHHHeEECCCC--cEEEeeccCCcccCCCCCc-----------------------------------eecccCChhh
Confidence 99999999997665 4899999998765332110 0114699999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC-
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK- 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT- 787 (934)
+|||++.+..++.++|||||||++|||++| ..||.... ......+.......+...++++.+||.+||+.||++||+
T Consensus 165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a 243 (318)
T cd05582 165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG-SLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGA 243 (318)
T ss_pred cCHHHHcCCCCCCccceeccceEeeeeccC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 999999988899999999999999999996 67775433 222222222222334456789999999999999999999
Q ss_pred ----HHHHHcCCCCCCccch
Q 002343 788 ----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 788 ----a~evL~HPff~~~~~~ 803 (934)
+.++++||||...++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 244 GPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred CCCCHHHHhCCCCcCCCCHH
Confidence 6779999999776543
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=360.59 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=187.9
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|.+.+.||+|+||+||++. ...++.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHH-HHHHhCCCchhceeeeeecccccc
Confidence 355789999999999999999984 45689999999865321 23455665 77889999999999988653
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
...|+|||||+++|.+.+. ..+++..+..++.||+.
T Consensus 93 ~~~~~~lv~e~~~~~l~~~~~------------------------------------------~~l~~~~~~~~~~qi~~ 130 (355)
T cd07874 93 EFQDVYLVMELMDANLCQVIQ------------------------------------------MELDHERMSYLLYQMLC 130 (355)
T ss_pred ccceeEEEhhhhcccHHHHHh------------------------------------------hcCCHHHHHHHHHHHHH
Confidence 3579999988776554431 12456778899999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++. +||+|||+++........
T Consensus 131 aL~~LH~~givHrDikp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~--------------------------------- 175 (355)
T cd07874 131 GIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMM--------------------------------- 175 (355)
T ss_pred HHHHHHhCCcccCCCChHHEEECCCCC--EEEeeCcccccCCCcccc---------------------------------
Confidence 999999999999999999999976654 999999999864332110
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHH-HH--------------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDAN-IV-------------------- 755 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~-i~-------------------- 755 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ..... .+
T Consensus 176 ---~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T cd07874 176 ---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_pred ---CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence 114689999999999999999999999999999999996 66665322 11110 00
Q ss_pred --hhccc-------------c------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 756 --KDRKD-------------L------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 756 --~~~~~-------------~------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
..... . .......++++||.+||+.||++|||+.|+|+||||.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 00000 0 0011235789999999999999999999999999995
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=362.74 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=189.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
..|.+.+.||+|+||+||++.. .+++.||+|...+. ....|+. +++.++|||||++++++.+.+..|+|||+|.+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 141 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAM-LLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS 141 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHH-HHHhCCCCCCcChhheEEeCCeeEEEEEccCC
Confidence 3588899999999999999854 45789999975433 2345655 78889999999999999999999999998877
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|.+++.. ....+++.+++.++.||+.||+|||++||||||
T Consensus 142 ~l~~~l~~---------------------------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 182 (357)
T PHA03209 142 DLYTYLTK---------------------------------------RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRD 182 (357)
T ss_pred cHHHHHHh---------------------------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 66554421 123467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++........ ....||+.|+|
T Consensus 183 lkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~------------------------------------~~~~gt~~y~a 224 (357)
T PHA03209 183 VKTENIFINDVDQ--VCIGDLGAAQFPVVAPAF------------------------------------LGLAGTVETNA 224 (357)
T ss_pred CCHHHEEECCCCC--EEEecCccccccccCccc------------------------------------ccccccccccC
Confidence 9999999976654 899999999753221110 11458999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-----------HHHHHhh---ccccc---------------
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-----------DANIVKD---RKDLF--------------- 762 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-----------~~~i~~~---~~~~~--------------- 762 (934)
||++.+..++.++|||||||++|||++++.++|...... ...++.. .+..+
T Consensus 225 PE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (357)
T PHA03209 225 PEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEY 304 (357)
T ss_pred CeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhh
Confidence 999999999999999999999999999877776542110 0011110 00000
Q ss_pred ---------------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 763 ---------------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 763 ---------------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
....+.++.+||.+||+.||++||||.|+|+||||.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 305 ASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred cccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0122456778999999999999999999999999964
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=352.90 Aligned_cols=251 Identities=23% Similarity=0.328 Sum_probs=192.0
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|.+.+.||+|+||+||++.. .+|+.||||++.+... .....|+..+....+|++|+++++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 45678999999999999854 5689999999875321 2234455534344467888999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++.. ...+++.+++.++.||+.||+|||++||
T Consensus 82 y~~----------~g~L~~~i~~-----------------------------~~~l~~~~~~~i~~qi~~al~~lH~~~i 122 (323)
T cd05615 82 YVN----------GGDLMYHIQQ-----------------------------VGKFKEPQAVFYAAEISVGLFFLHRRGI 122 (323)
T ss_pred CCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 665 3444443321 2346788999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++........ ....+||+
T Consensus 123 vHrDikp~Nill~~~~--~ikL~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~ 165 (323)
T cd05615 123 IYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVT-----------------------------------TRTFCGTP 165 (323)
T ss_pred eccCCCHHHeEECCCC--CEEEeccccccccCCCCcc-----------------------------------ccCccCCc
Confidence 9999999999997665 4899999998754322110 01146999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
.|+|||++.+..++.++|||||||++|+|++| .+||..... .....+.......+...+.++.+|+.+||+.||.+|+
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~ 244 (323)
T cd05615 166 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG-QPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRL 244 (323)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCC
Confidence 99999999998999999999999999999996 667765432 2233333333334455678999999999999999999
Q ss_pred C-----HHHHHcCCCCCCccc
Q 002343 787 K-----AQNVLNHPFFWTADT 802 (934)
Q Consensus 787 T-----a~evL~HPff~~~~~ 802 (934)
+ ..++++||||...++
T Consensus 245 ~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 245 GCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred CCCCCCHHHHhcCcccCCCCH
Confidence 7 478999999977654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=352.99 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=189.8
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||+||++.. .+++.||||++.+... +...+|+..+....+||||+++++++.+.+.+|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~- 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN- 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC-
Confidence 3699999999999854 5678999999975421 1234555534444579999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|..++.. ...+++.+++.++.||+.||+|||++||+|||
T Consensus 80 ---------~~~L~~~~~~-----------------------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD 121 (327)
T cd05617 80 ---------GGDLMFHMQR-----------------------------QRKLPEEHARFYAAEICIALNFLHERGIIYRD 121 (327)
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 3444433321 24578889999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++. +||+|||+++........ ....+||+.|+|
T Consensus 122 lkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~gt~~y~a 164 (327)
T cd05617 122 LKLDNVLLDADGH--IKLTDYGMCKEGLGPGDT-----------------------------------TSTFCGTPNYIA 164 (327)
T ss_pred CCHHHEEEeCCCC--EEEeccccceeccCCCCc-----------------------------------eecccCCcccCC
Confidence 9999999976664 999999998753221110 011469999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCc--------hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES--------FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~--------~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||++.+..++.++|||||||++|||++| .+||... .......+.......+...+.++.++|.+||+.||+
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~ 243 (327)
T cd05617 165 PEILRGEEYGFSVDWWALGVLMFEMMAG-RSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPK 243 (327)
T ss_pred HHHHCCCCCCchheeehhHHHHHHHHhC-CCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHH
Confidence 9999999999999999999999999996 6677421 111223333333334445678999999999999999
Q ss_pred CCcC------HHHHHcCCCCCCccch
Q 002343 784 LRPK------AQNVLNHPFFWTADTR 803 (934)
Q Consensus 784 ~RPT------a~evL~HPff~~~~~~ 803 (934)
+|++ ++++++||||...++.
T Consensus 244 ~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 244 ERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred HcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 9998 4699999999876644
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=369.38 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=193.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+..|.+.+.||+|+||.||++.. ..++.||||.... ....+|++ +++.++|||||++++++..++..|+|||+
T Consensus 166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~-iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEAR-LLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHH-HHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3456799999999999999999854 4588999996432 23456765 88899999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+.++|.+++.. ....+++.+++.++.||+.||+|||++|||
T Consensus 242 ~~~~L~~~l~~---------------------------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv 282 (461)
T PHA03211 242 YRSDLYTYLGA---------------------------------------RLRPLGLAQVTAVARQLLSAIDYIHGEGII 282 (461)
T ss_pred cCCCHHHHHHh---------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 76655544311 023467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++.+........ ....+||+.
T Consensus 283 HrDLKP~NILl~~~~--~vkL~DFGla~~~~~~~~~~~---------------------------------~~~~~GT~~ 327 (461)
T PHA03211 283 HRDIKTENVLVNGPE--DICLGDFGAACFARGSWSTPF---------------------------------HYGIAGTVD 327 (461)
T ss_pred ECcCCHHHEEECCCC--CEEEcccCCceeccccccccc---------------------------------ccccCCCcC
Confidence 999999999997655 489999999987643221100 011469999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--------hHHHHHHhhccc---cc---------------
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--------ERDANIVKDRKD---LF--------------- 762 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--------~~~~~i~~~~~~---~~--------------- 762 (934)
|+|||++.+..++.++|||||||+||||++|+.++|.... .....++..... .+
T Consensus 328 Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 407 (461)
T PHA03211 328 TNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHR 407 (461)
T ss_pred CcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhh
Confidence 9999999999999999999999999999998666654321 112222221100 00
Q ss_pred ----------------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 763 ----------------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 763 ----------------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
......++.+||.+||+.||.+|||+.|+|+||||.+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 408 AARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0012357899999999999999999999999999964
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=357.89 Aligned_cols=285 Identities=22% Similarity=0.273 Sum_probs=194.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+++.||||++.+... ....+|+ .++..++||||+++++.+.+++++||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAER-DILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHH-HHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467788999999999999854 5689999999864321 1223344 4778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 81 E~~~----------gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~L~~lH~~g 121 (360)
T cd05627 81 EFLP----------GGDMMTLLMK-----------------------------KDTLSEEATQFYIAETVLAIDAIHQLG 121 (360)
T ss_pred eCCC----------CccHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9665 3444444321 234678889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCC-CCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA-TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|+||||||+|||++.++ .+||+|||+++.+........... ............ .....................+|
T Consensus 122 ivHrDLkp~NIli~~~~--~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 198 (360)
T cd05627 122 FIHRDIKPDNLLLDAKG--HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN-MNSKRKAETWKKNRRQLAYSTVG 198 (360)
T ss_pred eEccCCCHHHEEECCCC--CEEEeeccCCcccccccccccccccccCCcccccccc-cccccccccccccccccccccCC
Confidence 99999999999997665 489999999986643221100000 000000000000 00000000000000001123579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccc-cc--cCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDL-FL--VEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~-~~--~~~~~e~~dLI~~~L~~ 780 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.... .... .+....... ++ ...++++++||.+|+.
T Consensus 199 t~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~- 276 (360)
T cd05627 199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG-YPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT- 276 (360)
T ss_pred CccccCHHHHcCCCCCCcceeccccceeeecccC-CCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-
Confidence 9999999999999999999999999999999996 66775433 2222 233222211 12 2356899999999874
Q ss_pred CCCCCc---CHHHHHcCCCCCCccch
Q 002343 781 NPDLRP---KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 781 DP~~RP---Ta~evL~HPff~~~~~~ 803 (934)
||.+|+ +++++++||||.+.++.
T Consensus 277 ~p~~R~~~~~~~ei~~hp~f~~~~~~ 302 (360)
T cd05627 277 DSENRIGSNGVEEIKSHPFFEGVDWG 302 (360)
T ss_pred ChhhcCCCCCHHHHhcCCCCCCCCHH
Confidence 999998 48999999999877654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=344.93 Aligned_cols=252 Identities=26% Similarity=0.400 Sum_probs=195.3
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|...+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++.+++++|+|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ-ILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHH-HHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 56778999999999999854 5689999999865321 12345665 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++... ....+++.++..++.|++.||+|||+++|
T Consensus 81 ~~~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 81 LMN----------GGDLKFHIYNM---------------------------GNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred ccC----------CCcHHHHHHhc---------------------------CcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 665 34443333210 12346888999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .++|+|||+++........ ....||+
T Consensus 124 vH~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~------------------------------------~~~~~~~ 165 (285)
T cd05605 124 VYRDLKPENILLDDYG--HIRISDLGLAVEIPEGETI------------------------------------RGRVGTV 165 (285)
T ss_pred EecCCCHHHEEECCCC--CEEEeeCCCceecCCCCcc------------------------------------ccccCCC
Confidence 9999999999997655 4999999999865432110 0135899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-----HHHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-----DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-----~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+..++.++||||+||++|||++| .+||...... ....+.......+...++.+.+||.+||+.||
T Consensus 166 ~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 244 (285)
T cd05605 166 GYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG-KSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDP 244 (285)
T ss_pred CccCcHHhcCCCCCccccchhHHHHHHHHHHC-CCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCH
Confidence 99999999998999999999999999999996 6777643221 11122222223344567899999999999999
Q ss_pred CCCc-----CHHHHHcCCCCCCccch
Q 002343 783 DLRP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 783 ~~RP-----Ta~evL~HPff~~~~~~ 803 (934)
++|| +++++++||||...+++
T Consensus 245 ~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 245 GFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred HHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 9999 99999999999765543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=360.08 Aligned_cols=285 Identities=24% Similarity=0.300 Sum_probs=194.2
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+++.||||++.+.. .....+|+. ++..++||||+++++.+.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERD-ILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHH-HHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 477889999999999999854 568999999986432 122344554 888899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 81 E~~~----------~g~L~~~i~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (376)
T cd05598 81 DYIP----------GGDMMSLLIR-----------------------------LGIFEEDLARFYIAELTCAIESVHKMG 121 (376)
T ss_pred eCCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9665 3444443321 234577888899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCC------CcchhhHH--HHHHHhhhhhhccccccccc
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT------GMDLQLVY--LVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+||||||+|||++.++. +||+|||+|..+............ ........ ......+.............
T Consensus 122 ivHrDlkp~Nill~~~~~--ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (376)
T cd05598 122 FIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRC 199 (376)
T ss_pred eEeCCCCHHHEEECCCCC--EEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccc
Confidence 999999999999976654 899999998654311100000000 00000000 00000000000000000001
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcccc---cccCCCHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKDL---FLVEHIPEAVDL 773 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~~---~~~~~~~e~~dL 773 (934)
.....+||+.|||||++.+..++.++|||||||++|||++| .+||...... . ..+..+.... .....++++.+|
T Consensus 200 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 278 (376)
T cd05598 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG-QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDL 278 (376)
T ss_pred cccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC-CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHH
Confidence 11235799999999999999999999999999999999996 6677554322 2 2232222221 122457899999
Q ss_pred HHHcccCCCCCCc---CHHHHHcCCCCCCccc
Q 002343 774 FTRLLDPNPDLRP---KAQNVLNHPFFWTADT 802 (934)
Q Consensus 774 I~~~L~~DP~~RP---Ta~evL~HPff~~~~~ 802 (934)
|.+|+ .+|.+|+ ++.++++||||...+.
T Consensus 279 i~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 279 ILRLC-CGAEDRLGKNGADEIKAHPFFKGIDF 309 (376)
T ss_pred HHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence 99987 5999999 9999999999977553
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=367.21 Aligned_cols=249 Identities=20% Similarity=0.254 Sum_probs=184.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC--hhHHHHHHHHHHHh------CCCCceeEEEEEEecC-C
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIAS------DQHPNIVRWYGVESDQ-D 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~------l~HpNIV~l~g~~~~~-~ 540 (934)
..++|.+.+.||+|+||+||++.. ..++.||||++.... ......|++ +++. .+|++|+++++++... +
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~i~~i~~~~~~~~~ 205 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQ-FMEKVRQADPADRFPLMKIQRYFQNETG 205 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHH-HHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence 357799999999999999999854 568899999986432 122334443 3333 3456799999988764 5
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
+.|||||+|.++|.+++.. ...+++.+++.|+.||+.||+
T Consensus 206 ~~~iv~~~~g~~l~~~l~~----------------------------------------~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 206 HMCIVMPKYGPCLLDWIMK----------------------------------------HGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred eEEEEEeccCCCHHHHHHH----------------------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 8999999887766655421 234677889999999999999
Q ss_pred HHHH-CCCcccCCCCCeEEEecCCC--------------ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhh
Q 002343 621 HLHE-IGLIHRDLKPQNVLISKDKS--------------FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLK 685 (934)
Q Consensus 621 yLHs-~gIVHRDLKP~NILl~~d~~--------------~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (934)
|||+ .|||||||||+|||++.++. ..+||+|||++.......
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~----------------------- 302 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR----------------------- 302 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc-----------------------
Confidence 9998 59999999999999976542 248999999875422110
Q ss_pred hhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc------
Q 002343 686 LVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR------ 758 (934)
Q Consensus 686 ~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~------ 758 (934)
+..+||+.|||||++.+..|+.++|||||||++|||++| ++||...... ....+...
T Consensus 303 ---------------~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG-~~pf~~~~~~~~~~~i~~~~g~~p~ 366 (467)
T PTZ00284 303 ---------------TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG-KLLYDTHDNLEHLHLMEKTLGRLPS 366 (467)
T ss_pred ---------------ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCCH
Confidence 115699999999999999999999999999999999996 7777543221 11111000
Q ss_pred ------------------ccc------------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 759 ------------------KDL------------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 759 ------------------~~~------------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
... ......+.+.|||.+||+.||++|||++|+|+||||..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 367 EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 000 00001346789999999999999999999999999965
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=348.25 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=206.0
Q ss_pred eEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc-
Q 002343 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~- 550 (934)
-|.+..+||+|+||.||++ +...|+.||||.+.-.. .+...+||. ++.+++.|+||+|||.+.....+|||||||+
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEIS-IMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEIS-IMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHH-HHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 3455678999999999998 56779999999986443 356788887 8889999999999999999999999999998
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
|+..|.+.. +..++.++++..++++.+.||+|||...-|||
T Consensus 113 GSiSDI~R~---------------------------------------R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHR 153 (502)
T KOG0574|consen 113 GSISDIMRA---------------------------------------RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHR 153 (502)
T ss_pred CcHHHHHHH---------------------------------------hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 566666632 24567889999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
|||..|||++.++. +||+|||.|..+....... .+..|||.||
T Consensus 154 DIKAGNILLNT~G~--AKLADFGVAGQLTDTMAKR-----------------------------------NTVIGTPFWM 196 (502)
T KOG0574|consen 154 DIKAGNILLNTDGI--AKLADFGVAGQLTDTMAKR-----------------------------------NTVIGTPFWM 196 (502)
T ss_pred hcccccEEEcccch--hhhhhccccchhhhhHHhh-----------------------------------CccccCcccc
Confidence 99999999977765 9999999998776543211 1267999999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHh-hccccc--ccCCCHHHHHHHHHcccCCCCCCc
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVK-DRKDLF--LVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~-~~~~~~--~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|||++..-.|+.++||||||++..||..| +|||.+.....+ ..+. ..++.+ +...+.++.|||++||.++|++|-
T Consensus 197 APEVI~EIGY~~~ADIWSLGITaIEMAEG-~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~ 275 (502)
T KOG0574|consen 197 APEVIEEIGYDTKADIWSLGITAIEMAEG-RPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK 275 (502)
T ss_pred cHHHHHHhccchhhhHhhhcchhhhhhcC-CCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH
Confidence 99999999999999999999999999995 899987543322 2222 222222 234567899999999999999999
Q ss_pred CHHHHHcCCCCCCccc
Q 002343 787 KAQNVLNHPFFWTADT 802 (934)
Q Consensus 787 Ta~evL~HPff~~~~~ 802 (934)
||.++++|||+++...
T Consensus 276 TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 276 TALRLCEHTFIKNAPG 291 (502)
T ss_pred HHHHHhhhhhhcCCCc
Confidence 9999999999987653
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=346.45 Aligned_cols=247 Identities=24% Similarity=0.403 Sum_probs=205.0
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChh------HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD------VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~------~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
...+|.+.+.||+|.||+|-++ .+..|+.||||.+.+...+ ...+||. +|+.++||||+.+|++|+..+.+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIe-IMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIE-IMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHH-HHhhcCCCceeehhhhhcCCceEE
Confidence 3456788899999999999998 4578999999998765431 2456776 899999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||| |..+|.|.+|+.+ .+.+++.+.+.+++||++|+.|+|
T Consensus 130 ivME----------YaS~GeLYDYiSe-----------------------------r~~LsErEaRhfFRQIvSAVhYCH 170 (668)
T KOG0611|consen 130 IVME----------YASGGELYDYISE-----------------------------RGSLSEREARHFFRQIVSAVHYCH 170 (668)
T ss_pred EEEE----------ecCCccHHHHHHH-----------------------------hccccHHHHHHHHHHHHHHHHHHh
Confidence 9999 6667777777653 355788999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
.+++||||||.+|||++.+++ +||+||||+..+..+. +.+++
T Consensus 171 knrVvHRDLKLENILLD~N~N--iKIADFGLSNly~~~k------------------------------------fLqTF 212 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQNNN--IKIADFGLSNLYADKK------------------------------------FLQTF 212 (668)
T ss_pred hccceecccchhheeecCCCC--eeeeccchhhhhcccc------------------------------------HHHHh
Confidence 999999999999999977665 9999999998765432 23348
Q ss_pred CCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
||+|-|.+||++.+.+| ++.+|-|||||+||-|+.| ..||. ....+....+..... ..++.+.++.-||+.||..|
T Consensus 213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyG-tMPFDG~Dhk~lvrQIs~GaY-rEP~~PSdA~gLIRwmLmVN 290 (668)
T KOG0611|consen 213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYG-TMPFDGRDHKRLVRQISRGAY-REPETPSDASGLIRWMLMVN 290 (668)
T ss_pred cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhc-ccccCCchHHHHHHHhhcccc-cCCCCCchHHHHHHHHHhcC
Confidence 99999999999999999 7899999999999999997 55665 445555444444332 33455678999999999999
Q ss_pred CCCCcCHHHHHcCCCC
Q 002343 782 PDLRPKAQNVLNHPFF 797 (934)
Q Consensus 782 P~~RPTa~evL~HPff 797 (934)
|++|.|+.+|..|=|.
T Consensus 291 P~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 291 PERRATIEDIASHWWV 306 (668)
T ss_pred cccchhHHHHhhhhee
Confidence 9999999999999776
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=364.79 Aligned_cols=251 Identities=31% Similarity=0.464 Sum_probs=201.9
Q ss_pred eecccCcEEEEEEEE-ecCcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhh
Q 002343 480 EIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDL 556 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dl 556 (934)
+||+|.||+||.++. .+...+|||.+.....+ +-+.|+..+.+.++|.|||+|+|++..++++-|.||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME--------- 652 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME--------- 652 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee---------
Confidence 599999999999854 55678999999755432 334454459999999999999999999999999999
Q ss_pred HHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCe
Q 002343 557 IYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636 (934)
Q Consensus 557 i~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~N 636 (934)
.+++|+|...|+.+ |..-.-.+..+-.+.+||+.||.|||++.|||||||-+|
T Consensus 653 -qVPGGSLSsLLrsk--------------------------WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDN 705 (1226)
T KOG4279|consen 653 -QVPGGSLSSLLRSK--------------------------WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDN 705 (1226)
T ss_pred -cCCCCcHHHHHHhc--------------------------cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCc
Confidence 88888888877642 111112567788999999999999999999999999999
Q ss_pred EEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcc
Q 002343 637 VLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL 716 (934)
Q Consensus 637 ILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~ 716 (934)
|||+.-. ..+||+|||-++++..-..+ ..++.||..|||||++.
T Consensus 706 VLvNTyS-GvlKISDFGTsKRLAginP~-----------------------------------TETFTGTLQYMAPEvID 749 (1226)
T KOG4279|consen 706 VLVNTYS-GVLKISDFGTSKRLAGINPC-----------------------------------TETFTGTLQYMAPEVID 749 (1226)
T ss_pred EEEeecc-ceEEecccccchhhccCCcc-----------------------------------ccccccchhhhChHhhc
Confidence 9997543 36999999999988754332 12367999999999998
Q ss_pred cC--CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhh----cccccccCCCHHHHHHHHHcccCCCCCCcCHHH
Q 002343 717 QG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD----RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQN 790 (934)
Q Consensus 717 ~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~----~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~e 790 (934)
++ .|+.++|||||||++.||+|| +|||-+.....+...+- ..+..+.+.+.+++.||.+|+.+||.+||+|.+
T Consensus 750 qG~RGYG~aADIWS~GCT~vEMATG-rPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~ 828 (1226)
T KOG4279|consen 750 QGPRGYGKAADIWSFGCTMVEMATG-RPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKD 828 (1226)
T ss_pred cCCcCCCchhhhhhccceeEeeccC-CCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHH
Confidence 75 589999999999999999996 88887655444443332 223344556789999999999999999999999
Q ss_pred HHcCCCCCCccch
Q 002343 791 VLNHPFFWTADTR 803 (934)
Q Consensus 791 vL~HPff~~~~~~ 803 (934)
+|+.||+....++
T Consensus 829 LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 829 LLQDPFLQHNNKK 841 (1226)
T ss_pred hccCcccccCCCC
Confidence 9999999776443
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=360.29 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=190.2
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-----~~y 543 (934)
|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+.+ ..|
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELK-MLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHH-HHHhCCCCCcCCHhheecCCCccccceEE
Confidence 45678999999999999854 5789999999865321 24556665 778889999999999998876 899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+||||+.++|.+.+. ....+++..++.++.||+.||+|||
T Consensus 81 lv~e~~~~~l~~~~~----------------------------------------~~~~l~~~~~~~~~~qi~~aL~~LH 120 (372)
T cd07853 81 VVTELMQSDLHKIIV----------------------------------------SPQPLSSDHVKVFLYQILRGLKYLH 120 (372)
T ss_pred EEeeccccCHHHHHh----------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999988766555441 1234678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+|+......... .+..
T Consensus 121 ~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~a~~~~~~~~~~----------------------------------~~~~ 164 (372)
T cd07853 121 SAGILHRDIKPGNLLVNSNC--VLKICDFGLARVEEPDESKH----------------------------------MTQE 164 (372)
T ss_pred hCCeeCCCCChHHEEECCCC--CEEeccccceeecccCcccc----------------------------------CCCC
Confidence 99999999999999997655 59999999998654322110 0114
Q ss_pred CCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHh-----------------------hc
Q 002343 704 YGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVK-----------------------DR 758 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~-----------------------~~ 758 (934)
.||+.|+|||++.+. .++.++|||||||++|||++| ++||..... .....+. ..
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (372)
T cd07853 165 VVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR-RILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG 243 (372)
T ss_pred CcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC
Confidence 589999999999875 479999999999999999996 677754321 1111100 00
Q ss_pred cc---------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 759 KD---------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 759 ~~---------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.. ......++++.+||.+||+.||++|||+.|+|+||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 244 PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 00 01123467899999999999999999999999999997643
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=356.90 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=193.5
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
...+.|.+.+.||+|+||+||++.. .+++.||+|++.+... ...+.++..+++.++||||+++++++.++++.|
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 3446789999999999999999854 5688999999864321 122334445888999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++. ...+++..+..++.||+.||+|||
T Consensus 120 lv~Ey~~g----------g~L~~~~~------------------------------~~~~~~~~~~~~~~qi~~aL~~LH 159 (371)
T cd05622 120 MVMEYMPG----------GDLVNLMS------------------------------NYDVPEKWARFYTAEVVLALDAIH 159 (371)
T ss_pred EEEcCCCC----------CcHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99996653 44433332 223567788899999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++. +||+|||+|+.+........ ...
T Consensus 160 ~~~ivHrDLkp~NIll~~~~~--ikL~DfG~a~~~~~~~~~~~----------------------------------~~~ 203 (371)
T cd05622 160 SMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEGMVRC----------------------------------DTA 203 (371)
T ss_pred HCCEEeCCCCHHHEEECCCCC--EEEEeCCceeEcCcCCcccc----------------------------------cCc
Confidence 999999999999999976654 99999999987643221100 114
Q ss_pred CCCCccccchhcccCC----CcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccc---cccCCCHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQGR----QTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDL---FLVEHIPEAVDLF 774 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~----~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~---~~~~~~~e~~dLI 774 (934)
+||+.|||||++.+.. ++.++|||||||++|||++| .+||... ..... .+....... .....+.++++||
T Consensus 204 ~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 282 (371)
T cd05622 204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG-DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 282 (371)
T ss_pred ccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHH
Confidence 6999999999997543 78999999999999999996 6666543 32222 233222211 1224578999999
Q ss_pred HHcccCCCCC--CcCHHHHHcCCCCCCccchh
Q 002343 775 TRLLDPNPDL--RPKAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 775 ~~~L~~DP~~--RPTa~evL~HPff~~~~~~~ 804 (934)
.+||..++.+ |++++++++||||++.+...
T Consensus 283 ~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~~~ 314 (371)
T cd05622 283 CAFLTDREVRLGRNGVEEIKRHLFFKNDQWAW 314 (371)
T ss_pred HHHcCChhhhcCCCCHHHHhcCcccCCCChhH
Confidence 9999844433 78999999999998765443
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=358.38 Aligned_cols=245 Identities=27% Similarity=0.384 Sum_probs=185.7
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
|...+.||+|+||+||++.. .+|+.||||++.....+ ...+|+. +++.++|+||+++++++.+.+.+|+|||||
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIE-ILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHH-HHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 44567899999999999854 46899999998654332 3445555 778899999999999999999999999976
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.+ |+|... ...++..+..++.||+.||+|||++||||
T Consensus 155 ~~----------~~L~~~---------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 191 (353)
T PLN00034 155 DG----------GSLEGT---------------------------------HIADEQFLADVARQILSGIAYLHRRHIVH 191 (353)
T ss_pred CC----------Cccccc---------------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 64 333211 11234567789999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.+....... ....||..|
T Consensus 192 rDlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~-----------------------------------~~~~gt~~y 234 (353)
T PLN00034 192 RDIKPSNLLINSAK--NVKIADFGVSRILAQTMDPC-----------------------------------NSSVGTIAY 234 (353)
T ss_pred cCCCHHHEEEcCCC--CEEEcccccceecccccccc-----------------------------------cccccCccc
Confidence 99999999997665 49999999998764321110 114689999
Q ss_pred ccchhcccC-----CCcccccccchhhhhHHhhcCCCCCCCCchhH----HH-HHHhhcccccccCCCHHHHHHHHHccc
Q 002343 710 QAPEQLLQG-----RQTRAIDLFSLGCILFFCITGGKHPYGESFER----DA-NIVKDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 710 ~APE~l~~~-----~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~----~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
+|||++... ..+.++|||||||++|||++| ..||...... .. .+............+.++++||.+||+
T Consensus 235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 313 (353)
T PLN00034 235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG-RFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQ 313 (353)
T ss_pred cCccccccccccCcCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHcc
Confidence 999988532 235689999999999999996 7777632211 11 111122222334567899999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCCcc
Q 002343 780 PNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~~~ 801 (934)
.||++|||+.|+++||||....
T Consensus 314 ~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 314 REPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred CChhhCcCHHHHhcCcccccCC
Confidence 9999999999999999997654
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=370.04 Aligned_cols=259 Identities=28% Similarity=0.444 Sum_probs=205.1
Q ss_pred ceEEEeeeecccCcEEEEEEEEec------CcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~------g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
...++.++||+|+||+||++.... ...||||.++..... ++.+|+ .+++.++|||||+++|+|..++.+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REa-eLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREA-ELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHH-HHHHhccCCCeEEEEEEEccCCee
Confidence 345667899999999999975432 467999999865543 334444 599999999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|+| ||..|+|.+||+......... ..+.+ ...+++..+.+.|+.|||.|++||
T Consensus 565 ~MvFE----------Ym~~GDL~eFLra~sP~a~~~-----------~~g~~----~~~~L~~~q~L~iA~QIAaGM~YL 619 (774)
T KOG1026|consen 565 CMVFE----------YMDHGDLHEFLRARSPKADKL-----------ASGQD----TPPPLSTSQFLHIATQIAAGMEYL 619 (774)
T ss_pred EEEEE----------ecccccHHHHHHhhCCccccc-----------cCCCC----CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 888999999997654433211 11111 134578899999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
-++.+|||||..+|+|| ..++.|||+||||+|.......+.....+
T Consensus 620 s~~~FVHRDLATRNCLV--ge~l~VKIsDfGLsRdiYssDYYk~~~~t-------------------------------- 665 (774)
T KOG1026|consen 620 SSHHFVHRDLATRNCLV--GENLVVKISDFGLSRDIYSSDYYKVRGNT-------------------------------- 665 (774)
T ss_pred HhCcccccchhhhhcee--ccceEEEecccccchhhhhhhhhcccCCc--------------------------------
Confidence 99999999999999999 44578999999999987655443322111
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccC-CCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVE-HIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~-~~~e~~dLI~~~L~~ 780 (934)
.=..+|||||.|..++||.+||||||||+|||+++-|+.||... .++....+.....+..++ .+.++.+|+..||+.
T Consensus 666 -~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~ 744 (774)
T KOG1026|consen 666 -LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNE 744 (774)
T ss_pred -eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhc
Confidence 12458999999999999999999999999999999888887654 445555566555555444 567999999999999
Q ss_pred CCCCCcCHHHHH
Q 002343 781 NPDLRPKAQNVL 792 (934)
Q Consensus 781 DP~~RPTa~evL 792 (934)
+|++||++.||-
T Consensus 745 ~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 745 NPKRRPSFKEIH 756 (774)
T ss_pred CcccCCCHHHHH
Confidence 999999999874
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=361.18 Aligned_cols=256 Identities=31% Similarity=0.434 Sum_probs=196.0
Q ss_pred ecccccccccccCceeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeE
Q 002343 455 LLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVR 531 (934)
Q Consensus 455 ~~~~~~~~~~~~~~~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~ 531 (934)
.|++.++ +..++.|...+.||+|+||+||++...+|+.||||++..... .+...|+. ++..++|||+|+
T Consensus 64 ~fs~~el-------~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~-~ls~l~H~Nlv~ 135 (361)
T KOG1187|consen 64 SFSYDEL-------RKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVE-ILSRLRHPNLVK 135 (361)
T ss_pred eeeHHHH-------HHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHH-HHhcCCCcCccc
Confidence 4666666 455677888899999999999999888899999999876443 34666665 888999999999
Q ss_pred EEEEEecCC-eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHH
Q 002343 532 WYGVESDQD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (934)
Q Consensus 532 l~g~~~~~~-~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 610 (934)
++|||.+.+ ..+||+| ||++|+|.++|+.... . .++|..+++
T Consensus 136 LlGyC~e~~~~~~LVYE----------ym~nGsL~d~L~~~~~--------------------------~-~L~W~~R~k 178 (361)
T KOG1187|consen 136 LLGYCLEGGEHRLLVYE----------YMPNGSLEDHLHGKKG--------------------------E-PLDWETRLK 178 (361)
T ss_pred EEEEEecCCceEEEEEE----------ccCCCCHHHHhCCCCC--------------------------C-CCCHHHHHH
Confidence 999999998 5999999 8999999998875311 1 678999999
Q ss_pred HHHHHHHHHHHHHHCC---CcccCCCCCeEEEecCCCceEEEeeccccccccC-CCcccccCCCCcchhhHHHHHHHhhh
Q 002343 611 VTRDIVSGLSHLHEIG---LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG-DMSCLTQNATGMDLQLVYLVSILLKL 686 (934)
Q Consensus 611 i~~qIa~gL~yLHs~g---IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (934)
|+.++|+||+|||+.. ||||||||+||||+ .++++||+|||+|+.... .....+
T Consensus 179 Ia~g~A~gL~yLH~~~~~~iiHrDiKssNILLD--~~~~aKlsDFGLa~~~~~~~~~~~~-------------------- 236 (361)
T KOG1187|consen 179 IALGAARGLAYLHEGCPPPIIHRDIKSSNILLD--EDFNAKLSDFGLAKLGPEGDTSVST-------------------- 236 (361)
T ss_pred HHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC--CCCCEEccCccCcccCCccccceee--------------------
Confidence 9999999999999854 99999999999995 456799999999976544 221100
Q ss_pred hhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----hHHH----HHHhhc
Q 002343 687 VICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----ERDA----NIVKDR 758 (934)
Q Consensus 687 ~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~~~----~i~~~~ 758 (934)
...||.+|+|||++..+..|.++|||||||+|.|++||++ +..... .... ..+...
T Consensus 237 ---------------~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~-~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 237 ---------------TVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRK-AVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred ---------------ecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCc-ccCCCCCcccccHHHHHHHHHHCc
Confidence 0159999999999999999999999999999999999854 333211 0011 111110
Q ss_pred -----cccc-c-cCC-----CHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 759 -----KDLF-L-VEH-----IPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 759 -----~~~~-~-~~~-----~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+.. . .+. ...+..+..+|++.+|.+||++.||++
T Consensus 301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 0000 0 111 223567889999999999999999753
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=349.58 Aligned_cols=254 Identities=25% Similarity=0.381 Sum_probs=190.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+++.||||++.+... ...++++..++..++||||+++++++.+++++|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 477889999999999999854 5689999999864221 1234444457788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|| .+|+|.+++... ...+++.+++.++.||+.||+|||+++|
T Consensus 82 ~~----------~g~~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 82 YY----------VGGDLLTLLSKF----------------------------EDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred cC----------CCCcHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 55 445555544321 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+++.+........ ...+||+
T Consensus 124 vH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~~~----------------------------------~~~~gt~ 167 (331)
T cd05597 124 VHRDIKPDNVLLDKNGH--IRLADFGSCLRLLADGTVQS----------------------------------NVAVGTP 167 (331)
T ss_pred EECCCCHHHEEECCCCC--EEEEECCceeecCCCCCccc----------------------------------cceeccc
Confidence 99999999999976654 99999999976544321110 0135999
Q ss_pred ccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccc----cccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDL----FLVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~----~~~~~~~e~~dLI~~ 776 (934)
.|||||++.. ..++.++|||||||++|+|++| ..||... ..... .+....... .....++++++||.+
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ 246 (331)
T cd05597 168 DYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYG-ETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRR 246 (331)
T ss_pred cccCHHHHhhccccccCCCCcceeehhhhHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHH
Confidence 9999999973 4578899999999999999996 6666543 22222 222221111 112357899999999
Q ss_pred cccCCCCC--CcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDL--RPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~--RPTa~evL~HPff~~~~~ 802 (934)
||..++++ |+++.++++||||...++
T Consensus 247 ll~~~~~r~~r~~~~~~l~hp~~~~~~~ 274 (331)
T cd05597 247 LICSPETRLGRNGLQDFKDHPFFEGIDW 274 (331)
T ss_pred HccCcccccCCCCHHHHhcCCCCCCCCH
Confidence 98765444 789999999999977554
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=355.71 Aligned_cols=248 Identities=24% Similarity=0.401 Sum_probs=189.6
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|.+.+.||+|+||+||++. ..+++.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELR-LLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHH-HHHhcCCCchhhhhhhhccccccc
Confidence 455778889999999999999985 45688999999865422 23456665 77889999999999987643
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
...|++||++.++|.+++. ...+++.+++.++.||+.
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~-----------------------------------------~~~l~~~~~~~i~~qi~~ 129 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVK-----------------------------------------CQKLSDEHVQFLIYQLLR 129 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 4579999988766654431 234678889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++. +||+|||+++.......
T Consensus 130 aL~~LH~~~ivHrdikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~---------------------------------- 173 (343)
T cd07878 130 GLKYIHSAGIIHRDLKPSNVAVNEDCE--LRILDFGLARQADDEMT---------------------------------- 173 (343)
T ss_pred HHHHHHHCCeecccCChhhEEECCCCC--EEEcCCccceecCCCcC----------------------------------
Confidence 999999999999999999999976654 99999999986543210
Q ss_pred ceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhh-----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKD----------------- 757 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~----------------- 757 (934)
..+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||.... .... .+...
T Consensus 174 ----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 174 ----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG-KALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred ----CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 1458999999999977 4689999999999999999996 66765422 1111 11000
Q ss_pred ------cccc-------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 ------RKDL-------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 ------~~~~-------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.... ......+.+.+||.+||+.||++|||+.|+|+||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0000 011234678999999999999999999999999999653
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=352.12 Aligned_cols=286 Identities=20% Similarity=0.317 Sum_probs=189.7
Q ss_pred cceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecC-
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQ- 539 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~- 539 (934)
.++|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. ++..+ +|||||++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELK-ILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHH-HHHHhccCcceeeEEeEecCCC
Confidence 45688899999999999999753 3357899999865332 24566776 44555 899999999988764
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhcc-c---hhHHHHHH--------------hhcc----cccchhhhH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQD-S---NLLNEVRI--------------RLLP----VMENTKDIE 596 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~-~---~~~~~~~~--------------~~~~----~~~~~~~~~ 596 (934)
+.+|++||||.+ +|.+++......+..+....... . ........ .... .........
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 468999997653 55555432211000000000000 0 00000000 0000 000000000
Q ss_pred hhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhh
Q 002343 597 LWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQL 676 (934)
Q Consensus 597 ~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~ 676 (934)
......+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~~~--------- 233 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRK--------- 233 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchhcc---------
Confidence 11134578889999999999999999999999999999999997655 4999999999876433211110
Q ss_pred HHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHH
Q 002343 677 VYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANI 754 (934)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i 754 (934)
....+|..|+|||++.+..++.++|||||||++|||++.+.+||..... .....
T Consensus 234 ------------------------~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~ 289 (338)
T cd05102 234 ------------------------GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR 289 (338)
T ss_pred ------------------------cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Confidence 0134678899999999999999999999999999999856888865322 22222
Q ss_pred Hhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 755 VKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 755 ~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
+... ....+...++++.+||.+||+.||++|||+.++++
T Consensus 290 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 290 LKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 2222 22223445688999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=347.64 Aligned_cols=254 Identities=21% Similarity=0.338 Sum_probs=190.2
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+++.||+|++.+... ...++++..++...+|+||+++++++.+.+.+|+|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 477789999999999999854 4578999999864321 1224444457788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|| .+|+|.+++... ...+++..++.++.||+.||+|||++||
T Consensus 82 y~----------~~g~L~~~l~~~----------------------------~~~l~~~~~~~~~~qi~~al~~lH~~~i 123 (332)
T cd05623 82 YY----------VGGDLLTLLSKF----------------------------EDRLPEDMARFYLAEMVIAIDSVHQLHY 123 (332)
T ss_pred cc----------CCCcHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55 445555555321 2346778889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++.+....... ....+||+
T Consensus 124 iHrDlkp~Nili~~~~--~~kL~DfG~a~~~~~~~~~~----------------------------------~~~~~gt~ 167 (332)
T cd05623 124 VHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQ----------------------------------SSVAVGTP 167 (332)
T ss_pred EecCCCHHHEEECCCC--CEEEeecchheecccCCcce----------------------------------ecccccCc
Confidence 9999999999997655 49999999997654322110 01146999
Q ss_pred ccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHH-hhccc----ccccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIV-KDRKD----LFLVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~-~~~~~----~~~~~~~~e~~dLI~~ 776 (934)
.|+|||++. ...++.++|||||||++|||++| .+||.. ........+ ..... ......++++++||.+
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ 246 (332)
T cd05623 168 DYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYG-ETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRR 246 (332)
T ss_pred cccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcC-CCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHH
Confidence 999999986 34678999999999999999996 566643 333332222 22111 1122457899999999
Q ss_pred cccCCCCC--CcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDL--RPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~--RPTa~evL~HPff~~~~~ 802 (934)
||..++++ |++++++++||||.+.++
T Consensus 247 ll~~~~~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 247 LICSREHRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred HccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence 99765554 689999999999977554
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=347.70 Aligned_cols=254 Identities=22% Similarity=0.351 Sum_probs=191.2
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+++.||||.+.+.. ....++++..++...+|+||+++++++.+.+..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 477889999999999999854 468899999986532 12234445567888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++... ...+++..++.++.||+.||+|||++||
T Consensus 82 y~~----------gg~L~~~l~~~----------------------------~~~l~~~~~~~~~~qi~~~L~~lH~~~i 123 (331)
T cd05624 82 YYV----------GGDLLTLLSKF----------------------------EDRLPEDMARFYIAEMVLAIHSIHQLHY 123 (331)
T ss_pred CCC----------CCcHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 554 45555554321 2346778888999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+|+.+........ ...+||+
T Consensus 124 iHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~----------------------------------~~~~gt~ 167 (331)
T cd05624 124 VHRDIKPDNVLLDMNG--HIRLADFGSCLKMNQDGTVQS----------------------------------SVAVGTP 167 (331)
T ss_pred eeccCchHHEEEcCCC--CEEEEeccceeeccCCCceee----------------------------------ccccCCc
Confidence 9999999999997665 489999999987654321110 1146999
Q ss_pred ccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccc----cccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDL----FLVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~----~~~~~~~e~~dLI~~ 776 (934)
.|+|||++.+ +.++.++|||||||++|||++| ..||... ..... .+....... .....++++++||.+
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ 246 (331)
T cd05624 168 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG-ETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQR 246 (331)
T ss_pred ccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhC-CCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHH
Confidence 9999999875 4678999999999999999996 6666543 22222 222221111 112346899999999
Q ss_pred cccCCCCC--CcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDL--RPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~--RPTa~evL~HPff~~~~~ 802 (934)
||..++++ |++++++++||||...++
T Consensus 247 ll~~~~~~~~~~~~~~~~~h~~f~~~~~ 274 (331)
T cd05624 247 LICSRERRLGQNGIEDFKKHAFFEGIDW 274 (331)
T ss_pred HccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence 99876654 578999999999976554
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=340.83 Aligned_cols=250 Identities=25% Similarity=0.398 Sum_probs=193.1
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|...+.||+|+||+||++. ..+++.||||.+.+... ....+|+. +++.++|+||+.+++.+.++++.|+|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQ-ILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHH-HHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 5567889999999999974 45789999999865321 22345665 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|+. +|+|.+++... ...++++.+++.++.|++.||.|||+++|
T Consensus 81 ~~~----------g~~L~~~l~~~---------------------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05630 81 LMN----------GGDLKFHIYHM---------------------------GEAGFEEGRAVFYAAEICCGLEDLHQERI 123 (285)
T ss_pred ecC----------CCcHHHHHHHh---------------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 554 44444433211 12346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .++|+|||++......... ....||.
T Consensus 124 iH~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~------------------------------------~~~~g~~ 165 (285)
T cd05630 124 VYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTI------------------------------------KGRVGTV 165 (285)
T ss_pred EeCCCCHHHEEECCCC--CEEEeeccceeecCCCccc------------------------------------cCCCCCc
Confidence 9999999999997655 4899999998765432110 0135899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-----HHHHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-----RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+..++.++|||||||++|+|++| .+||..... .................++++.+||.+||+.||
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 244 (285)
T cd05630 166 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAG-QSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDP 244 (285)
T ss_pred cccChHHHcCCCCCCccccHHHHHHHHHHHhC-CCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCH
Confidence 99999999999999999999999999999996 777764321 111122222223344567899999999999999
Q ss_pred CCCcC-----HHHHHcCCCCCCcc
Q 002343 783 DLRPK-----AQNVLNHPFFWTAD 801 (934)
Q Consensus 783 ~~RPT-----a~evL~HPff~~~~ 801 (934)
++||| ++|+++||||...+
T Consensus 245 ~~R~s~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05630 245 KERLGCQGGGAREVKEHPLFKQIN 268 (285)
T ss_pred HHccCCCCCchHHHHcChhhhccC
Confidence 99999 99999999996543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=365.94 Aligned_cols=256 Identities=22% Similarity=0.319 Sum_probs=196.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ec-CcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YE-GRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~-g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
..|.+.+.||+|+||+||++.. .+ ++.||+|.+...... ...+|+. +++.++|||||++++++.+.+.+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~-~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELH-CLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 4588899999999999999854 33 678999976543322 2344554 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.++|.... ....++++.++..++.||+.||+|||+++|
T Consensus 146 ~~~----------gg~L~~~l~~~~-------------------------~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i 190 (478)
T PTZ00267 146 YGS----------GGDLNKQIKQRL-------------------------KEHLPFQEYEVGLLFYQIVLALDEVHSRKM 190 (478)
T ss_pred CCC----------CCCHHHHHHHHH-------------------------hccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 554 455555443210 012356788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+|||++.++ .+||+|||+|+.+........ ....+||+
T Consensus 191 vHrDlkp~NIll~~~~--~~kL~DFgla~~~~~~~~~~~---------------------------------~~~~~gt~ 235 (478)
T PTZ00267 191 MHRDLKSANIFLMPTG--IIKLGDFGFSKQYSDSVSLDV---------------------------------ASSFCGTP 235 (478)
T ss_pred EECCcCHHhEEECCCC--cEEEEeCcCceecCCcccccc---------------------------------ccccCCCc
Confidence 9999999999997665 499999999987654221100 01256999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++.+..++.++|||||||++|||++| .+||..... ... .+........+...++++.+||.+||+.||++|
T Consensus 236 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 314 (478)
T PTZ00267 236 YYLAPELWERKRYSKKADMWSLGVILYELLTL-HRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALR 314 (478)
T ss_pred cccCHhHhCCCCCCcHHhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhC
Confidence 99999999999999999999999999999996 666654332 222 222222233344567899999999999999999
Q ss_pred cCHHHHHcCCCCCCc
Q 002343 786 PKAQNVLNHPFFWTA 800 (934)
Q Consensus 786 PTa~evL~HPff~~~ 800 (934)
|++.+++.|||+...
T Consensus 315 ps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 315 PTTQQLLHTEFLKYV 329 (478)
T ss_pred cCHHHHHhCHHHHHH
Confidence 999999999998543
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=341.28 Aligned_cols=253 Identities=22% Similarity=0.330 Sum_probs=192.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||.||++.. .+++.||+|.+..... ....+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVS-LLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHH-HHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 3578889999999999999854 5688999999864321 23456665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.++|.+++... ...+++..++.++.||+.||+|||+++|
T Consensus 85 ~~~~~l~~~l~~~---------------------------------------~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (301)
T cd07873 85 YLDKDLKQYLDDC---------------------------------------GNSINMHNVKLFLFQLLRGLNYCHRRKV 125 (301)
T ss_pred ccccCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8877665554211 2235677889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++......... ....+++
T Consensus 126 ~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 168 (301)
T cd07873 126 LHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTY-----------------------------------SNEVVTL 168 (301)
T ss_pred eCCCCCHHHEEECCCC--cEEECcCcchhccCCCCCcc-----------------------------------cccceee
Confidence 9999999999997665 48999999997643321110 0134788
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHH-hh---------------------cccc--
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIV-KD---------------------RKDL-- 761 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~-~~---------------------~~~~-- 761 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||.... ......+ .. ....
T Consensus 169 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (301)
T cd07873 169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG-RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYR 247 (301)
T ss_pred cccCcHHHhCCCCCccHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccc
Confidence 99999998764 478899999999999999996 66765432 1111110 00 0000
Q ss_pred ------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 762 ------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 762 ------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
.....++++++||.+||+.||.+|||++|+++||||.....+
T Consensus 248 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 248 ADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred cccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 012345688999999999999999999999999999765543
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=364.82 Aligned_cols=259 Identities=23% Similarity=0.321 Sum_probs=198.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC--
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD-- 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-- 540 (934)
+..+++|.+.+.||+|+||+||++. ..+|+.||||++..... ....+|+. ++..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~-~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVC-CLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHH-HHhcCCCCcEEEeecceeccccc
Confidence 3455789999999999999999985 45799999999865432 23345554 667889999999998765432
Q ss_pred ------eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 541 ------FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 541 ------~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
.+++||||| .+|+|.+++..... ....+++..+..++.|
T Consensus 107 ~~~~~~~i~lV~Ey~----------~~gsL~~~l~~~~~-------------------------~~~~l~e~~~~~i~~q 151 (496)
T PTZ00283 107 NPENVLMIALVLDYA----------NAGDLRQEIKSRAK-------------------------TNRTFREHEAGLLFIQ 151 (496)
T ss_pred CcccceEEEEEEeCC----------CCCcHHHHHHHhhc-------------------------cCCCCCHHHHHHHHHH
Confidence 478999954 45566555542110 1245678889999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
++.||+|||+++|+||||||+|||++.++ .+||+|||+++.+........
T Consensus 152 ll~aL~~lH~~~IiHrDLKP~NILl~~~~--~vkL~DFGls~~~~~~~~~~~---------------------------- 201 (496)
T PTZ00283 152 VLLAVHHVHSKHMIHRDIKSANILLCSNG--LVKLGDFGFSKMYAATVSDDV---------------------------- 201 (496)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEeCCC--CEEEEecccCeeccccccccc----------------------------
Confidence 99999999999999999999999997665 499999999987643221110
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccccccCCCHHHHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDLFLVEHIPEAVD 772 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~~~~~~~~e~~d 772 (934)
....+||+.|+|||++.+..++.++|||||||++|||++| .+||..... ... .+........+...++++.+
T Consensus 202 -----~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 275 (496)
T PTZ00283 202 -----GRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTL-KRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQE 275 (496)
T ss_pred -----cccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 0114699999999999999999999999999999999996 667765432 222 22222333344566789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||.+||+.||.+||++.++++|||+..
T Consensus 276 li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 276 IVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 999999999999999999999999854
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=353.92 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=203.3
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe-EEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDF-VYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~-~yLV 545 (934)
+.|...++||+|+||.+++. +..+++.+++|.+.-.. ...+.+|+. +++++.|||||.+++.|..++. +|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~-lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMD-LLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHH-HHHhccCCCeeeeccchhcCCceEEEE
Confidence 45677889999999999986 55678899999886433 235677776 8888999999999999998887 9999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|+||+| ++.+.+. .. +..-++++.+..++.||+.|++|||+
T Consensus 83 m~Y~eGg~l~~~i~-----------~~---------------------------k~~~f~E~~i~~~~~Q~~~av~ylH~ 124 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIK-----------EQ---------------------------KGVLFPEERILKWFVQILLAVNYLHE 124 (426)
T ss_pred EeecCCCCHHHHHH-----------HH---------------------------hhccccHHHHHHHHHHHHHHHHHHHh
Confidence 998875 4444442 11 12346889999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|+|||||+.||++++++. |||+|||+|+.+..+.... .+.+
T Consensus 125 ~~iLHRDlK~~Nifltk~~~--VkLgDfGlaK~l~~~~~~a-----------------------------------~tvv 167 (426)
T KOG0589|consen 125 NRVLHRDLKCANIFLTKDKK--VKLGDFGLAKILNPEDSLA-----------------------------------STVV 167 (426)
T ss_pred hhhhcccchhhhhhccccCc--eeecchhhhhhcCCchhhh-----------------------------------heec
Confidence 99999999999999998876 7999999999988764211 1267
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHH-HHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.||.||++.+.+|+.|+|||||||++|||++- +++|.... ... ..+........+...+.+++.||..||..+|
T Consensus 168 GTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~l-k~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P 246 (426)
T KOG0589|consen 168 GTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTL-KPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNP 246 (426)
T ss_pred CCCcccCHHHhCCCCCCccCcchhhcchHHHHHhc-ccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999995 77776543 332 3344444344555678899999999999999
Q ss_pred CCCcCHHHHHcCCCCC
Q 002343 783 DLRPKAQNVLNHPFFW 798 (934)
Q Consensus 783 ~~RPTa~evL~HPff~ 798 (934)
..||++.++|.+|...
T Consensus 247 ~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 247 EHRPSALELLRRPHLL 262 (426)
T ss_pred ccCCCHHHHhhChhhh
Confidence 9999999999998764
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=338.74 Aligned_cols=244 Identities=24% Similarity=0.432 Sum_probs=185.8
Q ss_pred ecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||+|+||+||++.. .+|+.||+|++.+... .....|++ +++.++||||+++++++.++.+.|+|||||.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~--- 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKE-ILEKVNSPFIVNLAYAFESKTHLCLVMSLMN--- 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHH-HHHhcCCCcEEEEEEEEecCCeEEEEEecCC---
Confidence 79999999999854 5699999999864221 12334554 7788999999999999999999999999665
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|..++... ...++++..+..++.||+.||+|||+.||+|||||
T Consensus 77 -------g~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 122 (277)
T cd05607 77 -------GGDLKYHIYNV---------------------------GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK 122 (277)
T ss_pred -------CCCHHHHHHhc---------------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence 34444333211 12345778888999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++ .++|+|||++..+...... +...||..|+|||
T Consensus 123 p~Nili~~~~--~~~l~Dfg~~~~~~~~~~~------------------------------------~~~~~~~~y~aPE 164 (277)
T cd05607 123 PENVLLDDQG--NCRLSDLGLAVELKDGKTI------------------------------------TQRAGTNGYMAPE 164 (277)
T ss_pred hHhEEEcCCC--CEEEeeceeeeecCCCcee------------------------------------eccCCCCCccCHH
Confidence 9999997665 4899999999866432110 1135899999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHH----HhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANI----VKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i----~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
++.+..++.++|||||||++|||++| .+||...... ...+ ............++++++||.+||+.||++||+
T Consensus 165 ~~~~~~~~~~~DvwslGv~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~ 243 (277)
T cd05607 165 ILKEEPYSYPVDWFAMGCSIYEMVAG-RTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLG 243 (277)
T ss_pred HHccCCCCCchhHHHHHHHHHHHHhC-CCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCC
Confidence 99998999999999999999999996 6777543211 1111 111111112345789999999999999999999
Q ss_pred H----HHHHcCCCCCCcc
Q 002343 788 A----QNVLNHPFFWTAD 801 (934)
Q Consensus 788 a----~evL~HPff~~~~ 801 (934)
+ ++++.||||...+
T Consensus 244 ~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 244 SREKNDDPRKHEFFKTIN 261 (277)
T ss_pred CccchhhhhcChhhcCCC
Confidence 9 7788999997644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=334.55 Aligned_cols=244 Identities=34% Similarity=0.564 Sum_probs=189.1
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHH-----HHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVA-----LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~-----~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|++.+.||+|+||+||++.. .+++.||+|++........ .+|+. +++.++||||+++++++.+.+..|+|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~-~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIK-ILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHH-HHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhh-ccccccccccccccccccccccccccccc
Confidence 67789999999999999855 4567999999987654332 23444 66777999999999999999999999998
Q ss_pred ccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 549 c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|.+ +|.+++. +...+++.+++.++.||+.||+|||+++|
T Consensus 80 ~~~~~L~~~l~----------------------------------------~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i 119 (260)
T PF00069_consen 80 CPGGSLQDYLQ----------------------------------------KNKPLSEEEILKIAYQILEALAYLHSKGI 119 (260)
T ss_dssp ETTEBHHHHHH----------------------------------------HHSSBBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ccccccccccc----------------------------------------ccccccccccccccccccccccccccccc
Confidence 876 5555552 13445778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .++|+|||++......... .....||.
T Consensus 120 ~H~dikp~NIl~~~~~--~~~l~Dfg~~~~~~~~~~~-----------------------------------~~~~~~~~ 162 (260)
T PF00069_consen 120 VHRDIKPENILLDENG--EVKLIDFGSSVKLSENNEN-----------------------------------FNPFVGTP 162 (260)
T ss_dssp EESSBSGGGEEESTTS--EEEESSGTTTEESTSTTSE-----------------------------------BSSSSSSG
T ss_pred cccccccccccccccc--ccccccccccccccccccc-----------------------------------cccccccc
Confidence 9999999999997554 4899999999865211111 11146899
Q ss_pred ccccchhcc-cCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHH----hhccccc---ccCCCHHHHHHHHHcc
Q 002343 708 GWQAPEQLL-QGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIV----KDRKDLF---LVEHIPEAVDLFTRLL 778 (934)
Q Consensus 708 ~Y~APE~l~-~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~----~~~~~~~---~~~~~~e~~dLI~~~L 778 (934)
.|+|||++. +..++.++|||||||++|+|++| ..||... ........ ....... ......++.++|.+||
T Consensus 163 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 241 (260)
T PF00069_consen 163 EYMAPEVLQQGKKYTRKSDIWSLGIILYELLTG-KLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKML 241 (260)
T ss_dssp GGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHS-SSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHc
Confidence 999999998 77889999999999999999996 5666654 11111111 1111000 1112378999999999
Q ss_pred cCCCCCCcCHHHHHcCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff 797 (934)
+.||++||++.++++||||
T Consensus 242 ~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 242 SKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp SSSGGGSTTHHHHHTSGGG
T ss_pred cCChhHCcCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=347.47 Aligned_cols=248 Identities=24% Similarity=0.357 Sum_probs=189.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .++..||+|.+..... ....+|++ +++.++||||+++++++.++++.|+|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQ-VLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHH-HHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 5678889999999999999854 4688999998865422 23456665 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-G 626 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-g 626 (934)
||. +|+|.+++.. ...+++..+..++.|++.||+|||+. +
T Consensus 84 ~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 124 (333)
T cd06650 84 HMD----------GGSLDQVLKK-----------------------------AGRIPEQILGKVSIAVIKGLTYLREKHK 124 (333)
T ss_pred cCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 664 3444444321 23356778889999999999999985 7
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++. +||+|||+++.+..... ....||
T Consensus 125 ivH~dlkp~Nili~~~~~--~kL~Dfg~~~~~~~~~~-------------------------------------~~~~~~ 165 (333)
T cd06650 125 IMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMA-------------------------------------NSFVGT 165 (333)
T ss_pred EEecCCChhhEEEcCCCC--EEEeeCCcchhhhhhcc-------------------------------------ccCCCC
Confidence 999999999999976654 99999999876532110 013589
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHH-H------------------------------
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI-V------------------------------ 755 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i-~------------------------------ 755 (934)
..|+|||++.+..++.++|||||||++|+|++| ..||.......... .
T Consensus 166 ~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (333)
T cd06650 166 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG-RYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPD 244 (333)
T ss_pred ccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhccc
Confidence 999999999988899999999999999999996 56665332211110 0
Q ss_pred ---------------hhccc-ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 756 ---------------KDRKD-LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 756 ---------------~~~~~-~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
..... ......+.++++||.+||+.||++|||+.|+++||||...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 245 SRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00000 0011235789999999999999999999999999999654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=339.55 Aligned_cols=246 Identities=28% Similarity=0.402 Sum_probs=189.7
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|+||+||++.. .+|+.||+|++..... ....+|+. +++.++||||+++++++.+.+..|+++||
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHH-HHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 67788999999999999855 4689999999864321 23456665 77888999999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++... ...+++..++.++.||+.||+|||+++|+
T Consensus 81 ~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~al~~LH~~~i~ 121 (284)
T cd07839 81 CDQDLKKYFDSC---------------------------------------NGDIDPEIVKSFMFQLLKGLAFCHSHNVL 121 (284)
T ss_pred CCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 887666554211 23467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||+++.+....... +...++..
T Consensus 122 H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 164 (284)
T cd07839 122 HRDLKPQNLLINKNG--ELKLADFGLARAFGIPVRCY-----------------------------------SAEVVTLW 164 (284)
T ss_pred cCCCCHHHEEEcCCC--cEEECccchhhccCCCCCCc-----------------------------------CCCccccC
Confidence 999999999997665 49999999998654322111 11357889
Q ss_pred cccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhh--------------ccc-----------
Q 002343 709 WQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKD--------------RKD----------- 760 (934)
Q Consensus 709 Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~--------------~~~----------- 760 (934)
|+|||++.+.. ++.++|||||||++|+|++|+.++|..... .... +... ...
T Consensus 165 y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07839 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATT 244 (284)
T ss_pred CcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcc
Confidence 99999987754 689999999999999999987776654321 1111 1000 000
Q ss_pred ---ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ---LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ---~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......++++++||.+||+.||.+|||++++++||||
T Consensus 245 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 245 SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0012346789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=348.81 Aligned_cols=255 Identities=26% Similarity=0.407 Sum_probs=197.4
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..-|+.|.+.++||+|+.+.||++...+.+.+|+|++..... +-...||..|-+.-.|.+||++|++...++++|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 344677899999999999999998888888899887754332 234678875555668999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||+-+++|...+....+. .+...++.+..|++.|+.++|
T Consensus 437 mvmE~Gd~DL~kiL~k~~~~---------------------------------------~~~~~lk~ywkqML~aV~~IH 477 (677)
T KOG0596|consen 437 MVMECGDIDLNKILKKKKSI---------------------------------------DPDWFLKFYWKQMLLAVKTIH 477 (677)
T ss_pred EEeecccccHHHHHHhccCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 99997777777666332221 122357789999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
.+||||.||||.|.|+-+. .+||+|||+|..+..+...... ...
T Consensus 478 ~~gIVHSDLKPANFLlVkG---~LKLIDFGIA~aI~~DTTsI~k---------------------------------dsQ 521 (677)
T KOG0596|consen 478 QHGIVHSDLKPANFLLVKG---RLKLIDFGIANAIQPDTTSIVK---------------------------------DSQ 521 (677)
T ss_pred HhceeecCCCcccEEEEee---eEEeeeechhcccCccccceee---------------------------------ccc
Confidence 9999999999999999643 4899999999998876543321 225
Q ss_pred CCCCccccchhcccCC-----------CcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccc---ccccCC--C
Q 002343 704 YGSSGWQAPEQLLQGR-----------QTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKD---LFLVEH--I 767 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~-----------~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~---~~~~~~--~ 767 (934)
+||+.||+||.+.... .++++||||||||||+|+.| ++||+.-......+..-..+ ...+.. .
T Consensus 522 vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYg-ktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~ 600 (677)
T KOG0596|consen 522 VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYG-KTPFGQIINQIAKLHAITDPNHEIEFPDIPEN 600 (677)
T ss_pred cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhc-CCchHHHHHHHHHHHhhcCCCccccccCCCCc
Confidence 7999999999997543 35789999999999999995 89998865444333221111 111222 2
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.++.++++.||..||++||++.++|+|||..-
T Consensus 601 ~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 601 DELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred hHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 35999999999999999999999999999843
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=333.41 Aligned_cols=255 Identities=29% Similarity=0.392 Sum_probs=196.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||.||++.. .+|+.||+|++..... .....|+..+++..+||||+++++++..++..|++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 467788999999999999854 5699999999875432 24455666667888999999999999999999999998
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-gI 627 (934)
|+++|.+++.. .. .....+++..++.++.||+.||+|||++ +|
T Consensus 82 ~~~~l~~~l~~-----------~~-------------------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i 125 (283)
T cd06617 82 MDTSLDKFYKK-----------VY-------------------------DKGLTIPEDILGKIAVSIVKALEYLHSKLSV 125 (283)
T ss_pred hcccHHHHHHH-----------hc-------------------------cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 77666555421 00 0123568889999999999999999997 99
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++.+...... +...|+.
T Consensus 126 ~h~dlkp~nil~~~~~--~~kl~dfg~~~~~~~~~~~------------------------------------~~~~~~~ 167 (283)
T cd06617 126 IHRDVKPSNVLINRNG--QVKLCDFGISGYLVDSVAK------------------------------------TIDAGCK 167 (283)
T ss_pred ecCCCCHHHEEECCCC--CEEEeeccccccccccccc------------------------------------ccccCCc
Confidence 9999999999997665 4999999999865432110 0135788
Q ss_pred ccccchhccc----CCCcccccccchhhhhHHhhcCCCCCCCCc---hhHHHHHHhhccccc-ccCCCHHHHHHHHHccc
Q 002343 708 GWQAPEQLLQ----GRQTRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKDRKDLF-LVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 708 ~Y~APE~l~~----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~---~~~~~~i~~~~~~~~-~~~~~~e~~dLI~~~L~ 779 (934)
.|+|||++.+ ..++.++|||||||++|+|++| .+||... .+............. ....+.++.+||.+||.
T Consensus 168 ~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 246 (283)
T cd06617 168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATG-RFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLK 246 (283)
T ss_pred cccChhhcCCcccccccCccccchhhHHHHHHHHhC-CCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence 9999999865 4568899999999999999996 6777542 223333332222222 22356789999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCCccch
Q 002343 780 PNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
.+|.+||+++++++||||....++
T Consensus 247 ~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 247 KNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred CChhhCcCHHHHhcCchhhhcccc
Confidence 999999999999999999765543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=328.49 Aligned_cols=249 Identities=30% Similarity=0.398 Sum_probs=190.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.|.+.+.||+|++|.||.+.. .+++.||+|.+..... ....+|+. ++..++||||+++++++.+++..|+
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQ-LLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHH-HHHhCCCCCeeeeEEEEccCCeEEE
Confidence 467788999999999999854 5689999999864321 12344554 7788999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||++. +++|.+++.. ...+++..++.++.|++.||+|||+
T Consensus 82 v~e~~~----------~~~l~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lH~ 122 (263)
T cd06625 82 FMEYMP----------GGSVKDQLKA-----------------------------YGALTETVTRKYTRQILEGVEYLHS 122 (263)
T ss_pred EEEECC----------CCcHHHHHHH-----------------------------hCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999664 3444443321 2345677889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.||+||||||+||+++.++ .++|+|||+++.+......... .....
T Consensus 123 ~~i~H~dl~p~nilv~~~~--~~~l~dfg~~~~~~~~~~~~~~--------------------------------~~~~~ 168 (263)
T cd06625 123 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQTICSSGTG--------------------------------MKSVT 168 (263)
T ss_pred CCeecCCCCHHHEEEcCCC--CEEEeecccceecccccccccc--------------------------------ccCCC
Confidence 9999999999999997665 4999999999865432111000 01135
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhh-cccccccCCCHHHHHHHHHcccCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
|+..|+|||++.+..++.++|||||||++|||++| .+||...... . ...... .....+...+.++.+||.+||..+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 247 (263)
T cd06625 169 GTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTE-KPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVEN 247 (263)
T ss_pred cCccccCcceeccCCCCchhhhHHHHHHHHHHHhC-CCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcC
Confidence 78899999999998899999999999999999996 6677543222 1 122211 122233455689999999999999
Q ss_pred CCCCcCHHHHHcCCCC
Q 002343 782 PDLRPKAQNVLNHPFF 797 (934)
Q Consensus 782 P~~RPTa~evL~HPff 797 (934)
|++|||+.++++||||
T Consensus 248 p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 248 AKKRPSAEELLRHFFV 263 (263)
T ss_pred cccCCCHHHHhhCCCC
Confidence 9999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=354.06 Aligned_cols=250 Identities=26% Similarity=0.328 Sum_probs=197.9
Q ss_pred EeeeecccCcEEEEEEEEec-CcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 477 FNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
+...||.|+||+||++...+ +-..|-|++..... +..+-||. +++.++||+||++++.|.-++.+||..|||+|+
T Consensus 36 IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIe-ILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG 114 (1187)
T KOG0579|consen 36 IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIE-ILAECDHPVIVKLLSAYYFENKLWILIEFCGGG 114 (1187)
T ss_pred HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhh-hhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence 34589999999999985554 44566777753332 34556775 788899999999999999999999999999987
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
-.|-+.+.- ..++.+.++..+++|++.||.|||+++||||||
T Consensus 115 AVDaimlEL--------------------------------------~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDL 156 (1187)
T KOG0579|consen 115 AVDAIMLEL--------------------------------------GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDL 156 (1187)
T ss_pred hHhHHHHHh--------------------------------------ccccchHHHHHHHHHHHHHHHHHhhcchhhhhc
Confidence 666553311 456789999999999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
|..|||++-||. ++|+|||.+......... ...++|||+||||
T Consensus 157 KAGNiL~TldGd--irLADFGVSAKn~~t~qk-----------------------------------RDsFIGTPYWMAP 199 (1187)
T KOG0579|consen 157 KAGNILLTLDGD--IRLADFGVSAKNKSTRQK-----------------------------------RDSFIGTPYWMAP 199 (1187)
T ss_pred cccceEEEecCc--EeeecccccccchhHHhh-----------------------------------hccccCCcccccc
Confidence 999999999987 899999998764322110 1126899999999
Q ss_pred hhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCch-hH-HHHHHhhcccc--cccCCCHHHHHHHHHcccCCCC
Q 002343 713 EQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ER-DANIVKDRKDL--FLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 713 E~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~-~~~i~~~~~~~--~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|+.. ..+|+.++||||||++|.||+-+ .||..+.. .+ ...+.+..++. .+..++..+.|++.+||.+||.
T Consensus 200 EVvmCET~KD~PYDykaDiWSlGITLIEMAqi-EPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~ 278 (1187)
T KOG0579|consen 200 EVVMCETFKDQPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPR 278 (1187)
T ss_pred hheeeccccCCCchhhhhHHhhhhHHHHHhcc-CCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCc
Confidence 9975 45789999999999999999995 77776532 33 23444444332 2445677999999999999999
Q ss_pred CCcCHHHHHcCCCCCCccch
Q 002343 784 LRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~~~ 803 (934)
.||++.++|+||||.+....
T Consensus 279 ~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 279 NRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred cCCCHHHHhhCcccccCCcc
Confidence 99999999999999866543
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=332.31 Aligned_cols=247 Identities=28% Similarity=0.389 Sum_probs=188.0
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|++|+||++.. .+++.||||++.... .....+|+. ++..++||||+++++++.+++..|+|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREIS-LLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHH-HHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 66788999999999999855 468999999986432 133455665 77888999999999999999999999998
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++.... ....+++.+++.++.||+.||+|||++||+
T Consensus 81 ~~~~l~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 81 LSMDLKKYLDSLP-------------------------------------KGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred CCCCHHHHHhcCC-------------------------------------CCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 8776655542100 023467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+++......... +...|++.
T Consensus 124 H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 166 (285)
T cd07861 124 HRDLKPQNLLIDNKGV--IKLADFGLARAFGIPVRVY-----------------------------------THEVVTLW 166 (285)
T ss_pred ecCCCHHHEEEcCCCc--EEECcccceeecCCCcccc-----------------------------------cCCccccc
Confidence 9999999999976654 9999999997653321100 11357889
Q ss_pred cccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh------------------c---------
Q 002343 709 WQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD------------------R--------- 758 (934)
Q Consensus 709 Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~------------------~--------- 758 (934)
|+|||++.+. .++.++|||||||++|+|++| .+||....... ...... .
T Consensus 167 y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (285)
T cd07861 167 YRAPEVLLGSPRYSTPVDIWSIGTIFAEMATK-KPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKG 245 (285)
T ss_pred ccChHHhcCCCCcCcHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcc
Confidence 9999998754 468999999999999999996 66765432211 010000 0
Q ss_pred -ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 759 -KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 759 -~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
........++++++||.+||+.||++|||+.+++.||||
T Consensus 246 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 246 SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000112346789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=331.12 Aligned_cols=252 Identities=26% Similarity=0.394 Sum_probs=187.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecC------Ce
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQ------DF 541 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~------~~ 541 (934)
.+..|.+.+.||+|+||+||++.. .+++.||+|++..... .....|+..+....+||||+++++++... ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 345677788999999999999854 4688999999865432 34566766444444799999999998753 46
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|++||||. +|+|.+++... +...+++..++.++.|++.||+|
T Consensus 84 ~~iv~e~~~----------~~~L~~~l~~~---------------------------~~~~l~~~~~~~~~~qi~~~l~~ 126 (272)
T cd06637 84 LWLVMEFCG----------AGSVTDLIKNT---------------------------KGNTLKEEWIAYICREILRGLSH 126 (272)
T ss_pred EEEEEEcCC----------CCcHHHHHHhc---------------------------cCCCCCHHHHHHHHHHHHHHHHH
Confidence 899999665 34444443221 12346778889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|+||||||+||+++.++ .+||+|||+++.+....... .
T Consensus 127 LH~~~ivh~dl~~~nili~~~~--~~~l~Dfg~~~~~~~~~~~~-----------------------------------~ 169 (272)
T cd06637 127 LHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRR-----------------------------------N 169 (272)
T ss_pred HHHCCCccCCCCHHHEEECCCC--CEEEccCCCceecccccccC-----------------------------------C
Confidence 9999999999999999997665 49999999998654321110 1
Q ss_pred cCCCCCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc--ccccccCCCHHHHHH
Q 002343 702 VGYGSSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR--KDLFLVEHIPEAVDL 773 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~--~~~~~~~~~~e~~dL 773 (934)
...|+..|+|||++. +..++.++|||||||++|||++| ..||...... ........ ........+.++.+|
T Consensus 170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (272)
T cd06637 170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG-APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSF 248 (272)
T ss_pred cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC-CCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHH
Confidence 145899999999986 34578899999999999999997 5566543222 22111111 111223456799999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff 797 (934)
|.+||+.||.+|||+.+++.||||
T Consensus 249 i~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 249 IESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHcCCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=341.44 Aligned_cols=256 Identities=27% Similarity=0.387 Sum_probs=209.1
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|..-++||+|+||.|+-+ ...+|+.+|.|++.+... ..++.|-+ ++...+.+.||.+--.|++.+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~-iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQ-ILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHH-HHHHhccCcEEEEeeeecCCCceEEE
Confidence 45777889999999999987 446799999998865432 23455544 78888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|. .|++|+|.-+|... ...+++++.++.++.+|+.||+|||+.
T Consensus 264 Lt----------lMNGGDLkfHiyn~---------------------------g~~gF~e~ra~FYAAEi~cGLehlH~~ 306 (591)
T KOG0986|consen 264 LT----------LMNGGDLKFHIYNH---------------------------GNPGFDEQRARFYAAEIICGLEHLHRR 306 (591)
T ss_pred EE----------eecCCceeEEeecc---------------------------CCCCCchHHHHHHHHHHHhhHHHHHhc
Confidence 99 66777775544321 135789999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+||.|||||+|||+++.|+ ++|+|.|||..+..+.... ..+|
T Consensus 307 ~iVYRDLKPeNILLDd~Gh--vRISDLGLAvei~~g~~~~------------------------------------~rvG 348 (591)
T KOG0986|consen 307 RIVYRDLKPENILLDDHGH--VRISDLGLAVEIPEGKPIR------------------------------------GRVG 348 (591)
T ss_pred ceeeccCChhheeeccCCC--eEeeccceEEecCCCCccc------------------------------------cccC
Confidence 9999999999999977665 9999999999887754321 1479
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-----HHHHHhhcccccccCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-----DANIVKDRKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-----~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
|.+|||||++.++.|+..+|+|||||++|||+.| ..||....+. ....+......++..+++++++|.+.+|.+
T Consensus 349 T~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G-~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~K 427 (591)
T KOG0986|consen 349 TVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAG-HSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTK 427 (591)
T ss_pred cccccCHHHHcCCcccCCccHHHHHhHHHHHHcc-cCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999996 7788654332 223334444555677899999999999999
Q ss_pred CCCCCc-----CHHHHHcCCCCCCccchhh
Q 002343 781 NPDLRP-----KAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 781 DP~~RP-----Ta~evL~HPff~~~~~~~~ 805 (934)
||++|. ++++|.+||||++.+++.-
T Consensus 428 dp~~RLGcrg~ga~evk~HpfFk~lnw~rl 457 (591)
T KOG0986|consen 428 DPEKRLGCRGEGAQEVKEHPFFKDLNWRRL 457 (591)
T ss_pred CHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence 999996 5789999999999887654
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=332.61 Aligned_cols=251 Identities=26% Similarity=0.401 Sum_probs=194.0
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|...+.||+|+||+||++.. .+++.||+|.+.+... ....+|++ ++..++|+||+++++++.+++..|++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQ-ILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHH-HHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 45668899999999999744 5689999999865321 12345665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++... ...++++..+..++.|++.||.|||++||
T Consensus 81 ~~~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 81 IMN----------GGDLKFHIYNM---------------------------GNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred ecc----------CccHHHHHHHh---------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 655 34444333211 12357888999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||++......... ....|+.
T Consensus 124 iH~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~------------------------------------~~~~g~~ 165 (285)
T cd05632 124 VYRDLKPENILLDDYG--HIRISDLGLAVKIPEGESI------------------------------------RGRVGTV 165 (285)
T ss_pred eecCCCHHHEEECCCC--CEEEecCCcceecCCCCcc------------------------------------cCCCCCc
Confidence 9999999999996654 5999999999765332110 0145899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHH---HhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANI---VKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i---~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+..++.++|||||||++|+|++| .+||....... ..+ +...........++++.+|+.+||+.||
T Consensus 166 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 244 (285)
T cd05632 166 GYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEG-QSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDP 244 (285)
T ss_pred CccChHHhcCCCCCcccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCH
Confidence 99999999988999999999999999999996 77776543221 111 1112223344567889999999999999
Q ss_pred CCCcC-----HHHHHcCCCCCCccc
Q 002343 783 DLRPK-----AQNVLNHPFFWTADT 802 (934)
Q Consensus 783 ~~RPT-----a~evL~HPff~~~~~ 802 (934)
++||+ +.++++||||.....
T Consensus 245 ~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 245 KQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred hHcCCCcccChHHHHcChhhhcCCH
Confidence 99999 889999999976544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=365.31 Aligned_cols=260 Identities=18% Similarity=0.264 Sum_probs=187.5
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe--cCcEEEEE------------------EeecCC--hhHHHHHHHHHHHhCCCC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY--EGRSVAVK------------------RLVKTH--HDVALKEIQNLIASDQHP 527 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~--~g~~VAVK------------------~l~~~~--~~~~~~Ei~~ll~~l~Hp 527 (934)
.+.+.|.+.+.||+|+||+||++... .+..+++| .+.... .....+|+. ++..++||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~-il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEIL-ALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHH-HHHhCCCC
Confidence 34567999999999999999986432 22222222 111111 122345655 78889999
Q ss_pred ceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHH
Q 002343 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607 (934)
Q Consensus 528 NIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 607 (934)
|||++++++.+.+..|+|+|++.++|.++++.. .+. + .......+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~--------------------------------~-~~~~~~~~ 268 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYDFDLYSFMYDE--AFD--------------------------------W-KDRPLLKQ 268 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccccCHHHHHhhc--ccc--------------------------------c-cccccHHH
Confidence 999999999999999999999887776665321 110 0 01123456
Q ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhh
Q 002343 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLV 687 (934)
Q Consensus 608 i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (934)
++.++.||+.||+|||++|||||||||+|||++.++. +||+|||+|+.+........
T Consensus 269 ~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~--vkL~DFGla~~~~~~~~~~~--------------------- 325 (501)
T PHA03210 269 TRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK--IVLGDFGTAMPFEKEREAFD--------------------- 325 (501)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEeCCCceecCccccccc---------------------
Confidence 7889999999999999999999999999999976654 99999999987654322110
Q ss_pred hhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----hHHHHHHhhcc---c
Q 002343 688 ICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----ERDANIVKDRK---D 760 (934)
Q Consensus 688 ~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~~~~i~~~~~---~ 760 (934)
...+||..|+|||++.+..++.++|||||||++|||++|+.+|++... .....++.... .
T Consensus 326 -------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 392 (501)
T PHA03210 326 -------------YGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDE 392 (501)
T ss_pred -------------ccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChh
Confidence 114699999999999999999999999999999999998777775432 11111111000 0
Q ss_pred -----------------------c-----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 761 -----------------------L-----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 761 -----------------------~-----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
. .......++.++|.+||+.||++|||+.|+|+||||....
T Consensus 393 ~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 393 EFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE 461 (501)
T ss_pred hcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence 0 0011235678899999999999999999999999996654
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=324.58 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=200.0
Q ss_pred ecceEEEe-eeecccCcEEEEEE-EEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEEE
Q 002343 471 IGKLVVFN-KEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYL 544 (934)
Q Consensus 471 i~~~~~~~-~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~yL 544 (934)
|.+.|.+. ++||-|-.|.|..+ +..+|+.+|+|++.. ...+.+|+..-.....|||||+++++|++ ...+.+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 44555554 56999999999887 567799999999853 35678888766666789999999999765 467899
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||| .|.+|.|+..+.++. ...+++.++..|++||+.|+.|||+
T Consensus 137 VmE----------~meGGeLfsriq~~g---------------------------~~afTErea~eI~~qI~~Av~~lH~ 179 (400)
T KOG0604|consen 137 VME----------CMEGGELFSRIQDRG---------------------------DQAFTEREASEIMKQIGLAVRYLHS 179 (400)
T ss_pred eee----------cccchHHHHHHHHcc---------------------------cccchHHHHHHHHHHHHHHHHHHHh
Confidence 999 788888887765432 3457889999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 625 IGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
.+|.||||||+|+|.+..+ +..+||+|||+|+.-.....- .+.
T Consensus 180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L------------------------------------~TP 223 (400)
T KOG0604|consen 180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDL------------------------------------MTP 223 (400)
T ss_pred cchhhccCChhheeeecCCCCcceEecccccccccCCCccc------------------------------------cCC
Confidence 9999999999999997433 456899999999975432111 124
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-----HHHHHHhhcccccccC----CCHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-----RDANIVKDRKDLFLVE----HIPEAVDLF 774 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----~~~~i~~~~~~~~~~~----~~~e~~dLI 774 (934)
|-||.|.|||++-..+|+..+|+||+||+||-|++| .|||..... .....+......|+.+ .+.+++|+|
T Consensus 224 c~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG-yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlI 302 (400)
T KOG0604|consen 224 CFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLI 302 (400)
T ss_pred cccccccCHHHhCchhcCCCCCccchhHHHHHhhcC-CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHH
Confidence 679999999999999999999999999999999997 566543221 1122233333333332 356899999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+++|..+|.+|.|++++++|||+....
T Consensus 303 R~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 303 RKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred HHHhcCCchhheeHHHhhcCchhcccc
Confidence 999999999999999999999996543
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=339.95 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=183.1
Q ss_pred eeeeccc--CcEEEEEE-EEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 478 NKEIAKG--SNGTVVLE-GNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 478 ~~~IG~G--sfGtVy~~-~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
.++||+| +||+||++ ...+|+.||||++..... ...++++..+++.++|||||++++++.+++..|+|||||.
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 5689999 78899997 446789999999865422 1233333458888999999999999999999999999655
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++... ...++++..++.++.||+.||+|||+++|+||
T Consensus 83 ----------~~~l~~~~~~~---------------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~ 125 (327)
T cd08227 83 ----------YGSAKDLICTH---------------------------FMDGMSELAIAYILQGVLKALDYIHHMGYVHR 125 (327)
T ss_pred ----------CCcHHHHHHhh---------------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 44444443211 02346788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++. ++++|||.+..+......... .. .+.....++..|+
T Consensus 126 dlkp~Nil~~~~~~--~~l~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~y~ 175 (327)
T cd08227 126 SVKASHILISVDGK--VYLSGLRSNLSMINHGQRLRV-VH---------------------------DFPKYSVKVLPWL 175 (327)
T ss_pred CCChhhEEEecCCc--EEEcccchhhccccccccccc-cc---------------------------cccccccceeccc
Confidence 99999999977664 899999876544321110000 00 0001135778899
Q ss_pred cchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhccc--------------------------
Q 002343 711 APEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKD-------------------------- 760 (934)
Q Consensus 711 APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~-------------------------- 760 (934)
|||++.+ ..++.++|||||||++|||++| ..||........ ........
T Consensus 176 aPE~~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T cd08227 176 SPEVLQQNLQGYDAKSDIYSVGITACELANG-HVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGL 254 (327)
T ss_pred ChHHhhcccCCCCchhhHHHHHHHHHHHHHC-CCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCC
Confidence 9999976 4589999999999999999996 677754322111 10000000
Q ss_pred -------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 761 -------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 761 -------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
......++++.+||.+||+.||++|||++++++||||..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 001123468899999999999999999999999999964
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=321.48 Aligned_cols=247 Identities=26% Similarity=0.453 Sum_probs=189.3
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD-QDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~yLVmE 547 (934)
|.+.+.||+|++|.||++.. .+++.||+|++..... +...+|+ .+++.++||||+++++.+.. +..+|++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEA-QLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHH-HHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 67889999999999999854 4578999999864321 2234444 47888899999999998764 557899999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|. +++|.+++... ....+++.+++.++.|++.||+|||++||
T Consensus 81 ~~~----------~~~l~~~l~~~---------------------------~~~~l~~~~~~~~~~~l~~~l~~lH~~~i 123 (257)
T cd08223 81 FCE----------GGDLYHKLKEQ---------------------------KGKLLPENQVVEWFVQIAMALQYLHEKHI 123 (257)
T ss_pred ccC----------CCcHHHHHHHh---------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 665 34444443221 12346788999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .++|+|||+++.+....... ....|++
T Consensus 124 ~H~di~p~nil~~~~~--~~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~~ 166 (257)
T cd08223 124 LHRDLKTQNVFLTRTN--IIKVGDLGIARVLENQCDMA-----------------------------------STLIGTP 166 (257)
T ss_pred eccCCCchhEEEecCC--cEEEecccceEEecccCCcc-----------------------------------ccccCCc
Confidence 9999999999997655 49999999998764321110 1145889
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++.+..++.++|||||||++|+|++| .+||.... .... .+........+...++++.+||.+||+.||++|
T Consensus 167 ~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 245 (257)
T cd08223 167 YYMSPELFSNKPYNYKSDVWALGCCVYEMATL-KHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKR 245 (257)
T ss_pred CccChhHhcCCCCCchhhhHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccC
Confidence 99999999999999999999999999999997 55665432 2222 222222222334567899999999999999999
Q ss_pred cCHHHHHcCCCC
Q 002343 786 PKAQNVLNHPFF 797 (934)
Q Consensus 786 PTa~evL~HPff 797 (934)
|++.++++||||
T Consensus 246 p~~~~~l~~~~~ 257 (257)
T cd08223 246 PSVKSILRQPYI 257 (257)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=329.84 Aligned_cols=245 Identities=23% Similarity=0.384 Sum_probs=188.9
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||+||++. ..+++.||+|++..... ....+|+. +++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELE-ILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHH-HHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 35667899999999999984 46789999999865432 22345554 67888999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|++ |+|..+ ..+++..+..++.|++.||+|||++||+
T Consensus 81 ~~~----------~~l~~~---------------------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 117 (279)
T cd06619 81 MDG----------GSLDVY---------------------------------RKIPEHVLGRIAVAVVKGLTYLWSLKIL 117 (279)
T ss_pred CCC----------CChHHh---------------------------------hcCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 664 333221 1235667889999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||++..+..... +..+||..
T Consensus 118 H~dlkp~Nill~~~~~--~~l~dfg~~~~~~~~~~-------------------------------------~~~~~~~~ 158 (279)
T cd06619 118 HRDVKPSNMLVNTRGQ--VKLCDFGVSTQLVNSIA-------------------------------------KTYVGTNA 158 (279)
T ss_pred eCCCCHHHEEECCCCC--EEEeeCCcceecccccc-------------------------------------cCCCCChh
Confidence 9999999999977654 99999999976543211 11468999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--------HHHHHHhh--cccccccCCCHHHHHHHHHcc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--------RDANIVKD--RKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--------~~~~i~~~--~~~~~~~~~~~e~~dLI~~~L 778 (934)
|+|||++.+..++.++|||||||++|+|++| .+||..... ........ .........++++.++|.+||
T Consensus 159 y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 237 (279)
T cd06619 159 YMAPERISGEQYGIHSDVWSLGISFMELALG-RFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCM 237 (279)
T ss_pred hcCceeecCCCCCCcchHHHHHHHHHHHHhC-CCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHh
Confidence 9999999998999999999999999999996 667643211 11111111 111122335678999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCccc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
+.||++||+++++++||||...+.
T Consensus 238 ~~~P~~Rp~~~eil~~~~~~~~~~ 261 (279)
T cd06619 238 RKQPKERPAPENLMDHPFIVQYND 261 (279)
T ss_pred hCChhhCCCHHHHhcCcccccccC
Confidence 999999999999999999966543
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=351.64 Aligned_cols=249 Identities=26% Similarity=0.403 Sum_probs=203.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCChhH----HHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~~~----~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
....+.++||.|.||.|+.+++.. ...||||.++....+. ++.|. .+|.+.+||||++|.|+......+.|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EA-sIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEA-SIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhh-hhcccCCCCcEEEEEEEEecCceeEE
Confidence 345678899999999999986542 3579999998654443 34443 48999999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|.| ||++|+|+.||+.++ +.+...++.-+++.|+.|++||-+
T Consensus 708 iTE----------yMENGsLDsFLR~~D----------------------------GqftviQLVgMLrGIAsGMkYLsd 749 (996)
T KOG0196|consen 708 ITE----------YMENGSLDSFLRQND----------------------------GQFTVIQLVGMLRGIASGMKYLSD 749 (996)
T ss_pred Ehh----------hhhCCcHHHHHhhcC----------------------------CceEeehHHHHHHHHHHHhHHHhh
Confidence 999 999999999998754 234566888999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.|+|||||..+|||+ |.++++|++||||++.+.++.... ....+ +.
T Consensus 750 m~YVHRDLAARNILV--NsnLvCKVsDFGLSRvledd~~~~-ytt~G-------------------------------GK 795 (996)
T KOG0196|consen 750 MNYVHRDLAARNILV--NSNLVCKVSDFGLSRVLEDDPEAA-YTTLG-------------------------------GK 795 (996)
T ss_pred cCchhhhhhhhheee--ccceEEEeccccceeecccCCCcc-ccccC-------------------------------Cc
Confidence 999999999999999 667889999999999887665211 11111 11
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhccccccc-CCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRKDLFLV-EHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~~~~~~-~~~~e~~dLI~~~L~~DP 782 (934)
-...|.|||.+..+++|.++||||+|++|||+++-|..||.+..+++ .+.+.....++++ +++..+..|+..||++|-
T Consensus 796 IPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR 875 (996)
T KOG0196|consen 796 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDR 875 (996)
T ss_pred cceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHh
Confidence 23589999999999999999999999999999999999998876554 4555555555544 455678899999999999
Q ss_pred CCCcCHHHHHcC
Q 002343 783 DLRPKAQNVLNH 794 (934)
Q Consensus 783 ~~RPTa~evL~H 794 (934)
++||++.+|+++
T Consensus 876 ~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 876 NRRPKFAQIVST 887 (996)
T ss_pred hcCCCHHHHHHH
Confidence 999999999864
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=328.74 Aligned_cols=247 Identities=24% Similarity=0.342 Sum_probs=187.5
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++. ..+|+.||+|++..... ....+|+. +++.++|+||+++++++.+++..|+|||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREAS-LLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHH-HHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 578889999999999999984 45789999999864322 23456665 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|.++|.+.+... ...+++.+++.++.||+.||+|||++||
T Consensus 84 ~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i 124 (291)
T cd07870 84 YMHTDLAQYMIQH---------------------------------------PGGLHPYNVRLFMFQLLRGLAYIHGQHI 124 (291)
T ss_pred cccCCHHHHHHhC---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8877665544211 1235667788999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++......... ....+++
T Consensus 125 ~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 167 (291)
T cd07870 125 LHRDLKPQNLLISYLG--ELKLADFGLARAKSIPSQTY-----------------------------------SSEVVTL 167 (291)
T ss_pred ccCCCChHHEEEcCCC--cEEEeccccccccCCCCCCC-----------------------------------CCccccc
Confidence 9999999999997665 49999999997543221100 0134788
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH---HHHh--------------h----ccccc---
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVK--------------D----RKDLF--- 762 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~---~i~~--------------~----~~~~~--- 762 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||........ .+.. . .....
T Consensus 168 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (291)
T cd07870 168 WYRPPDVLLGATDYSSALDIWGAGCIFIEMLQG-QPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPC 246 (291)
T ss_pred cccCCceeecCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcccc
Confidence 99999998764 578899999999999999996 667754322111 1000 0 00000
Q ss_pred ----------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 763 ----------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 763 ----------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.....+++.+++.+||+.||++|||+++++.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 247 KPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 01124688999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=334.46 Aligned_cols=247 Identities=25% Similarity=0.337 Sum_probs=188.3
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||+||++.. .++..||+|.+..... ....+|++ ++..++||||+++++++.+++++|+||||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELK-VLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 477789999999999999854 4688999998864422 23456665 77888999999999999999999999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+|
T Consensus 81 ~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i 121 (308)
T cd06615 81 MD----------GGSLDQVLKK-----------------------------AGRIPENILGKISIAVLRGLTYLREKHKI 121 (308)
T ss_pred cC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence 54 4555554432 2346778889999999999999998 589
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||++..+..... ....|+.
T Consensus 122 ~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~-------------------------------------~~~~~~~ 162 (308)
T cd06615 122 MHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMA-------------------------------------NSFVGTR 162 (308)
T ss_pred EECCCChHHEEEecCC--cEEEccCCCccccccccc-------------------------------------ccCCCCc
Confidence 9999999999997665 489999999875432211 0145899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc----------------------------
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR---------------------------- 758 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~---------------------------- 758 (934)
.|+|||++.+..++.++|||||||++|+|++| ..||..... .........
T Consensus 163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
T cd06615 163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG-RYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFE 241 (308)
T ss_pred CccChhHhcCCCCCccchHHHHHHHHHHHHhC-CCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHH
Confidence 99999999888899999999999999999997 555532211 111111100
Q ss_pred ---------ccc-cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 ---------KDL-FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 ---------~~~-~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
... .....++++++||.+||..||++|||+.++++||||...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 000 011245689999999999999999999999999999653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=324.64 Aligned_cols=251 Identities=27% Similarity=0.377 Sum_probs=191.1
Q ss_pred EEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
|...+.||+|+||+||++...+|+.||||.+..... ....+|+. +++.++|+||+++++++.+.+..|++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVD-LLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHH-HHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 556788999999999998777899999998864321 12334544 77888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|. +|+|.+++.. ...+++..+..++.|++.||+|||+.
T Consensus 81 ~e~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (265)
T cd06631 81 MEFVP----------GGSISSILNR-----------------------------FGPLPEPVFCKYTKQILDGVAYLHNN 121 (265)
T ss_pred EecCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99654 4445444422 23457788899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|+|+||||+||+++.++ .++|+|||+++............. ......|
T Consensus 122 ~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ 170 (265)
T cd06631 122 CVVHRDIKGNNVMLMPNG--IIKLIDFGCARRLAWVGLHGTHSN-----------------------------MLKSMHG 170 (265)
T ss_pred CcccCCcCHHhEEECCCC--eEEeccchhhHhhhhccccccccc-----------------------------cccccCC
Confidence 999999999999997655 489999999986543211110000 0111458
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh--cccccccCCCHHHHHHHHHcccCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD--RKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~--~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+..|+|||++.+..++.++|||||||++|+|++| .+||....... ..+... .....+...+.++.++|.+||+.+
T Consensus 171 ~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 249 (265)
T cd06631 171 TPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG-KPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRD 249 (265)
T ss_pred CccccChhhhcCCCCcchhhHHHHHHHHHHHHhC-CCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999999999988899999999999999999996 66775432221 112111 112233445688999999999999
Q ss_pred CCCCcCHHHHHcCCCC
Q 002343 782 PDLRPKAQNVLNHPFF 797 (934)
Q Consensus 782 P~~RPTa~evL~HPff 797 (934)
|++||++.++++||||
T Consensus 250 p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 250 QHERPSALQLLRHDFL 265 (265)
T ss_pred cccCCCHHHHhcCCCC
Confidence 9999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=329.09 Aligned_cols=249 Identities=28% Similarity=0.431 Sum_probs=196.2
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+++.||+|++.+.. .+...+|++ +++.++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKR-ILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 477889999999999999854 468999999986532 123445655 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|. +|+|.+++.. ...+++..+..++.||+.||+|||++|
T Consensus 81 e~~~----------~~~L~~~~~~-----------------------------~~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 81 EYVP----------GGELFSHLRK-----------------------------SGRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred ecCC----------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9663 3344333321 234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++....... ...|+
T Consensus 122 i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~~~--------------------------------------~~~~~ 161 (290)
T cd05580 122 IVYRDLKPENLLLDSDG--YIKITDFGFAKRVKGRTY--------------------------------------TLCGT 161 (290)
T ss_pred EecCCCCHHHEEECCCC--CEEEeeCCCccccCCCCC--------------------------------------CCCCC
Confidence 99999999999997665 489999999987644310 14589
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+.|+|||.+.+...+.++|||||||++|+|++| ..||..... .....+.......+...++.++++|.+||+.||.+|
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 240 (290)
T cd05580 162 PEYLAPEIILSKGYGKAVDWWALGILIYEMLAG-YPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKR 240 (290)
T ss_pred ccccChhhhcCCCCCccccHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHc
Confidence 999999999888889999999999999999996 677754432 222222222333344557899999999999999999
Q ss_pred c-----CHHHHHcCCCCCCccch
Q 002343 786 P-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 786 P-----Ta~evL~HPff~~~~~~ 803 (934)
+ +++++++||||...++.
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 241 LGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred cCcccCCHHHHHcCcccccCCHH
Confidence 9 99999999999776643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=329.92 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=193.7
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..++|.+.+.||+|+||+||++. ..+++.||+|.+..... +...+|+. ++..++||||+++++.+.++...|+||
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~-~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL-VMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHH-HHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 44678889999999999999985 45789999999875433 23445554 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||+ .+|+|.+++. ...+++.++..++.|++.||+|||++|
T Consensus 97 e~~----------~~~~L~~~~~------------------------------~~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 97 EYL----------AGGSLTDVVT------------------------------ETCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred ccc----------CCCCHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 955 4455554432 123466788899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++......... ....|+
T Consensus 137 i~H~dLkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~ 179 (296)
T cd06654 137 VIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR-----------------------------------STMVGT 179 (296)
T ss_pred cccCCCCHHHEEEcCCC--CEEECccccchhcccccccc-----------------------------------CcccCC
Confidence 99999999999997665 49999999988654322110 013588
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcc-c-ccccCCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRK-D-LFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~-~-~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+.|+|||.+.+..++.++|||||||++|+|++| .+||..... ... ....... . ..+....+.+.+||.+||..||
T Consensus 180 ~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 258 (296)
T cd06654 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDV 258 (296)
T ss_pred ccccCHHHHcCCCCCccchHHHHHHHHHHHHhC-CCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCc
Confidence 999999999988899999999999999999996 666654332 211 1111111 1 1123356789999999999999
Q ss_pred CCCcCHHHHHcCCCCCCc
Q 002343 783 DLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~ 800 (934)
++||++.++++||||...
T Consensus 259 ~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 259 EKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ccCcCHHHHhhChhhhcc
Confidence 999999999999999643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=326.67 Aligned_cols=245 Identities=25% Similarity=0.384 Sum_probs=185.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||+|+||.||++.. .+++.||+|.+..... ....+|+. +++.++||||+++++++.+.+..|+||||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~-~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEII-MMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHH-HHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 4567778999999999999854 5688999999865432 22344554 78888999999999999999999999997
Q ss_pred ccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 549 c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|++ +|.+++ .. ...+++.+++.++.|++.||+|||++||
T Consensus 88 ~~~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i 127 (267)
T cd06645 88 CGGGSLQDIY-----------HV-----------------------------TGPLSESQIAYVSRETLQGLYYLHSKGK 127 (267)
T ss_pred cCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 763 444433 21 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||++..+....... ....||.
T Consensus 128 ~H~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 170 (267)
T cd06645 128 MHRDIKGANILLTDNG--HVKLADFGVSAQITATIAKR-----------------------------------KSFIGTP 170 (267)
T ss_pred ecCCCCHHHEEECCCC--CEEECcceeeeEccCccccc-----------------------------------ccccCcc
Confidence 9999999999997655 48999999987654321100 0145899
Q ss_pred ccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHH-HHhhccc-c---cccCCCHHHHHHHHHcc
Q 002343 708 GWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDAN-IVKDRKD-L---FLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 708 ~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~-i~~~~~~-~---~~~~~~~e~~dLI~~~L 778 (934)
.|+|||++. ...++.++|||||||++|+|++|. +||.. ....... ....... . .....+..+.++|.+||
T Consensus 171 ~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 249 (267)
T cd06645 171 YWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ-PPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMAL 249 (267)
T ss_pred cccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC-CCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHc
Confidence 999999984 456789999999999999999974 45533 2222111 1111111 0 01134568999999999
Q ss_pred cCCCCCCcCHHHHHcCCC
Q 002343 779 DPNPDLRPKAQNVLNHPF 796 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPf 796 (934)
+.||++||+++++++|||
T Consensus 250 ~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 250 TKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred cCCchhCcCHHHHhcCCC
Confidence 999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=329.99 Aligned_cols=249 Identities=26% Similarity=0.399 Sum_probs=194.1
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.++|.+.+.||.|++|+||++. ..+|+.||+|.+..... +...+|+. +++.++||||+++++++.+.+..|+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEIL-VMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHH-HHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 3578899999999999999974 46789999999864332 23445554 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|. +|+|.+++. ...+++.+++.++.|++.||+|||++||
T Consensus 97 ~~~----------~~~L~~~~~------------------------------~~~l~~~~~~~i~~~l~~al~~LH~~~i 136 (296)
T cd06655 97 YLA----------GGSLTDVVT------------------------------ETCMDEAQIAAVCRECLQALEFLHANQV 136 (296)
T ss_pred ecC----------CCcHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 554 444444332 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||++..+....... ....|+.
T Consensus 137 ~H~dL~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 179 (296)
T cd06655 137 IHRDIKSDNVLLGMDG--SVKLTDFGFCAQITPEQSKR-----------------------------------STMVGTP 179 (296)
T ss_pred ccCCCCHHHEEECCCC--CEEEccCccchhcccccccC-----------------------------------CCcCCCc
Confidence 9999999999997665 49999999988765432111 0135889
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcc-c-ccccCCCHHHHHHHHHcccCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRK-D-LFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~-~-~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
.|+|||.+.+..++.++|||||||++|+|++| .+||..... ... .+..... . ..+...++++.+||.+||..||.
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 258 (296)
T cd06655 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVE 258 (296)
T ss_pred cccCcchhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChh
Confidence 99999999988899999999999999999996 666654322 222 2221111 1 12234567899999999999999
Q ss_pred CCcCHHHHHcCCCCCC
Q 002343 784 LRPKAQNVLNHPFFWT 799 (934)
Q Consensus 784 ~RPTa~evL~HPff~~ 799 (934)
+||++.++++||||..
T Consensus 259 ~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 259 KRGSAKELLQHPFLKL 274 (296)
T ss_pred hCCCHHHHhhChHhhh
Confidence 9999999999999954
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=330.98 Aligned_cols=265 Identities=24% Similarity=0.310 Sum_probs=186.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-----------------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-----------------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVR 531 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-----------------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~ 531 (934)
+.|.+.+.||+|+||.||++... ++..||||.+..... ....+|+. ++..++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK-ILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHH-HHhhcCCCCeeE
Confidence 46778899999999999997532 234799999875432 23456665 778889999999
Q ss_pred EEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHH
Q 002343 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (934)
Q Consensus 532 l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 611 (934)
+++++.+.+..|+|||||. +|+|.+++.......... ..............+++.+++.+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~----------~~~L~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i 143 (304)
T cd05096 84 LLGVCVDEDPLCMITEYME----------NGDLNQFLSSHHLDDKEE----------NGNDAVPPAHCLPAISYSSLLHV 143 (304)
T ss_pred EEEEEecCCceEEEEecCC----------CCcHHHHHHhcccccccc----------ccccccccccccccccHHHHHHH
Confidence 9999999999999999665 344444432211000000 00000000001234677889999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 612 ~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
+.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 144 ~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~~~~------------------------ 197 (304)
T cd05096 144 ALQIASGMKYLSSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYYRIQ------------------------ 197 (304)
T ss_pred HHHHHHHHHHHHHCCccccCcchhheEEcCCc--cEEECCCccceecccCceeEec------------------------
Confidence 99999999999999999999999999997665 4999999999866433211100
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcC-CCCCCCCchhHH-HHHH----hhc----ccc
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG-GKHPYGESFERD-ANIV----KDR----KDL 761 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltG-g~~Pf~~~~~~~-~~i~----~~~----~~~ 761 (934)
....++..|||||++.++.++.++|||||||++|||+++ +..||....... .... ... ...
T Consensus 198 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (304)
T cd05096 198 ---------GRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLF 268 (304)
T ss_pred ---------CcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccccccc
Confidence 013467899999999988999999999999999999875 466776533221 1111 100 111
Q ss_pred cccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 762 FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 762 ~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+...+..+.+||.+||+.||++|||+.+|.+
T Consensus 269 ~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 269 RPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 22345678999999999999999999999953
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=368.22 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=195.4
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec--CC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD--QD 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~ 540 (934)
...-..|.+.+.||+|+||+||++.. ..+..||+|.+..... .....|+. ++..++|||||+++++|.+ ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~-IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVN-VMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHH-HHHHcCCCCcCeEEEEEEecCCC
Confidence 33446789999999999999999854 4578999999864321 23456665 7888999999999998854 46
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|||||||.+ |+|.++|.... -....+++..++.|+.||+.||+
T Consensus 88 ~lyIVMEY~~g----------GSL~~lL~k~~-------------------------~~~g~L~E~~Il~Ia~QIL~ALa 132 (1021)
T PTZ00266 88 KLYILMEFCDA----------GDLSRNIQKCY-------------------------KMFGKIEEHAIVDITRQLLHALA 132 (1021)
T ss_pred EEEEEEeCCCC----------CcHHHHHHHHh-------------------------hccCCCCHHHHHHHHHHHHHHHH
Confidence 79999996653 34444332210 01245788999999999999999
Q ss_pred HHHHC-------CCcccCCCCCeEEEecC---------------CCceEEEeeccccccccCCCcccccCCCCcchhhHH
Q 002343 621 HLHEI-------GLIHRDLKPQNVLISKD---------------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVY 678 (934)
Q Consensus 621 yLHs~-------gIVHRDLKP~NILl~~d---------------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~ 678 (934)
|||+. +||||||||+||||+.+ +...+||+|||+++.+......
T Consensus 133 YLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-------------- 198 (1021)
T PTZ00266 133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA-------------- 198 (1021)
T ss_pred HHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc--------------
Confidence 99984 49999999999999642 2345899999999865432110
Q ss_pred HHHHHhhhhhhccccccccceeecCCCCCccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCc--hhHHHHH
Q 002343 679 LVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGES--FERDANI 754 (934)
Q Consensus 679 ~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~--~~~~~~i 754 (934)
....||+.|+|||++.+ ..++.++||||||||||||++| .+||... .......
T Consensus 199 ----------------------~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG-k~PF~~~~~~~qli~~ 255 (1021)
T PTZ00266 199 ----------------------HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG-KTPFHKANNFSQLISE 255 (1021)
T ss_pred ----------------------cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC-CCCCCcCCcHHHHHHH
Confidence 11469999999999865 3578999999999999999996 6777543 2233333
Q ss_pred HhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 755 VKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 755 ~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+...+.......++++.+||.+||+.+|.+||++.++|.||||...
T Consensus 256 lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 256 LKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 4433444344567899999999999999999999999999999644
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=338.27 Aligned_cols=247 Identities=26% Similarity=0.394 Sum_probs=200.3
Q ss_pred eeeecccCcEEEEEE-EEecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
.++||.|.||+||-+ +..+|+.||||++.+.. .+..++.+..++..++||.||.+-..|+..+.+++|||.+.|+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 578999999999987 56789999999997643 2344444445889999999999999999999999999977666
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
..++|.. . ..+.+++...+.++.||+.||.|||.+||||+||
T Consensus 649 MLEMILS----------s----------------------------EkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDL 690 (888)
T KOG4236|consen 649 MLEMILS----------S----------------------------EKGRLPERITKFLVTQILVALRYLHFKNIVHCDL 690 (888)
T ss_pred HHHHHHH----------h----------------------------hcccchHHHHHHHHHHHHHHHHHhhhcceeeccC
Confidence 5555421 1 1345777788889999999999999999999999
Q ss_pred CCCeEEEecCCCc-eEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 633 KPQNVLISKDKSF-CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 633 KP~NILl~~d~~~-~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
||+|||+.....+ .+||||||+|+.+.+..- ....+|||.|.|
T Consensus 691 KPENVLLas~~~FPQvKlCDFGfARiIgEksF------------------------------------RrsVVGTPAYLa 734 (888)
T KOG4236|consen 691 KPENVLLASASPFPQVKLCDFGFARIIGEKSF------------------------------------RRSVVGTPAYLA 734 (888)
T ss_pred CchheeeccCCCCCceeeccccceeecchhhh------------------------------------hhhhcCCccccC
Confidence 9999999765433 699999999998865321 123789999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHh---hcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK---DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~---~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
||++.++.|+..-|+||.|||+|--++| ..||.+..+-..+|.. ..++..+.+.++++.|||..+|+..-.+|.+.
T Consensus 735 PEVLrnkGyNrSLDMWSVGVIiYVsLSG-TFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysv 813 (888)
T KOG4236|consen 735 PEVLRNKGYNRSLDMWSVGVIIYVSLSG-TFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSV 813 (888)
T ss_pred HHHHhhccccccccceeeeEEEEEEecc-cccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999999996 7788765433323222 22333455678899999999999999999999
Q ss_pred HHHHcCCCCCC
Q 002343 789 QNVLNHPFFWT 799 (934)
Q Consensus 789 ~evL~HPff~~ 799 (934)
+..|.|||+.+
T Consensus 814 dk~lsh~Wlq~ 824 (888)
T KOG4236|consen 814 DKSLSHPWLQD 824 (888)
T ss_pred Hhhccchhhhc
Confidence 99999999854
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=332.98 Aligned_cols=254 Identities=26% Similarity=0.390 Sum_probs=189.6
Q ss_pred EEEeeeecccCcEEEEEEEEe---cCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVY 543 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~y 543 (934)
|.+.+.||+|+||+||++... .++.||+|.+.... .+...+|+. +++.++||||+++++++.+. +.+|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIA-LLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHH-HHHhcCCCCccceEEEEeCCCCceEE
Confidence 667889999999999998543 58999999997632 234566765 77889999999999999988 8899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||+|+++|.+++..... .....+++..++.++.||+.||+|||
T Consensus 81 lv~e~~~~~l~~~~~~~~~-----------------------------------~~~~~~~~~~~~~i~~qi~~~l~~lH 125 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQ-----------------------------------AKRVSIPPSMVKSLLWQILNGVHYLH 125 (316)
T ss_pred EEEeCCCcCHHHHHHhhcc-----------------------------------CCCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 9999988776665421000 00125678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 624 EIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
+++|+||||||+|||++.++ ...+||+|||+++.+.......... .
T Consensus 126 ~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------------------------------~ 173 (316)
T cd07842 126 SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADL--------------------------------D 173 (316)
T ss_pred hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccccccc--------------------------------C
Confidence 99999999999999997611 3459999999998765432210000 0
Q ss_pred cCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH-----------HHHHh-------------
Q 002343 702 VGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD-----------ANIVK------------- 756 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-----------~~i~~------------- 756 (934)
...||..|+|||++.+. .++.++|||||||++|+|++| .+||....... ..++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 252 (316)
T cd07842 174 PVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL-EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDI 252 (316)
T ss_pred CccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc-CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHH
Confidence 14588999999988764 579999999999999999996 66765322111 00000
Q ss_pred -----------hcc-cccc-----------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 757 -----------DRK-DLFL-----------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 757 -----------~~~-~~~~-----------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
... .... ...+.++.++|.+||+.||++|||+.|+++||||
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 253 KKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0000 0345678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=326.63 Aligned_cols=264 Identities=25% Similarity=0.339 Sum_probs=218.9
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hH--HHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DV--ALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~--~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
-+.|.+.++||+|.||+|.+++ ..+|+.+|+|++++.-. +. .+.|- .++...+||.+..+.-.|+..+.+|+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~-RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTEN-RVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHH-HHHHhccCcHHHHhhhhhccCceEEE
Confidence 3567778999999999999985 46799999999876421 11 22332 47888999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||| |.++|.|.-+|.. ...++++..+.+-..|++||.|||+
T Consensus 246 VMe----------yanGGeLf~HLsr-----------------------------er~FsE~RtRFYGaEIvsAL~YLHs 286 (516)
T KOG0690|consen 246 VME----------YANGGELFFHLSR-----------------------------ERVFSEDRTRFYGAEIVSALGYLHS 286 (516)
T ss_pred EEE----------EccCceEeeehhh-----------------------------hhcccchhhhhhhHHHHHHhhhhhh
Confidence 999 7777877766543 3456777788899999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++||.||||.+|+|+++||+ +||+|||||+.--.... ...+.|
T Consensus 287 ~~ivYRDlKLENLlLDkDGH--IKitDFGLCKE~I~~g~-----------------------------------t~kTFC 329 (516)
T KOG0690|consen 287 RNIVYRDLKLENLLLDKDGH--IKITDFGLCKEEIKYGD-----------------------------------TTKTFC 329 (516)
T ss_pred CCeeeeechhhhheeccCCc--eEeeecccchhcccccc-----------------------------------eecccc
Confidence 99999999999999988876 99999999985332211 122379
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|||.|.|||++....|+.++|+|.+||+||||++|+-|+|....+.....+......++...+++++.|+..+|.+||++
T Consensus 330 GTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~k 409 (516)
T KOG0690|consen 330 GTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKK 409 (516)
T ss_pred CChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHh
Confidence 99999999999999999999999999999999998666666677777777776667778888999999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccchhhhhhhhcc
Q 002343 785 RP-----KAQNVLNHPFFWTADTRLSFLRDVSD 812 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~~~fl~~~sd 812 (934)
|. .|.||.+|+||.+.++...+.+.+..
T Consensus 410 RLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~P 442 (516)
T KOG0690|consen 410 RLGGGPDDAKEIMRHRFFASVDWEATYRKKIEP 442 (516)
T ss_pred hcCCCchhHHHHHhhhhhccCCHHHHHHhccCC
Confidence 96 48899999999999998777666544
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=322.78 Aligned_cols=251 Identities=33% Similarity=0.482 Sum_probs=190.5
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------------hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------------DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
|.+.+.||+|++|.||++.. .+++.||+|.+..... +...+|+. +++.++||||+++++++.+.+.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIA-LLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHH-HHHhcCCCCeeeEEEEEEeCCc
Confidence 45567899999999999844 5688999998864321 12234444 7888999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.+++|||++ +++|.+++.. ...+++..+..++.|++.||+|
T Consensus 81 ~~lv~e~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 81 LNIFLEYVP----------GGSVAALLNN-----------------------------YGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred cEEEEEecC----------CCCHHHHHHh-----------------------------ccCccHHHHHHHHHHHHHHHHH
Confidence 999999664 3444444321 2335677888999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++ .+||+|||+++.+........... ...
T Consensus 122 lH~~~ivH~di~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~-----------------------------~~~ 170 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKG--GIKISDFGISKKLEANSLSTKTNG-----------------------------ARP 170 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCC--CEEecccCCCcccccccccCCccc-----------------------------ccc
Confidence 9999999999999999997655 489999999987754221111000 001
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
...|+..|+|||.+.+..++.++|||||||++|+|++| .+||...... ...+........+...+.++.++|.+||+
T Consensus 171 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (267)
T cd06628 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG-KHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFE 249 (267)
T ss_pred ccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC-CCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHcc
Confidence 13588999999999988899999999999999999996 7777653221 12222222223334556899999999999
Q ss_pred CCCCCCcCHHHHHcCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff 797 (934)
.||++||++.++++||||
T Consensus 250 ~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 250 IDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCchhCcCHHHHhhCCCC
Confidence 999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=327.06 Aligned_cols=246 Identities=26% Similarity=0.376 Sum_probs=184.4
Q ss_pred eecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----h-HHHHHH--HHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 480 EIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----D-VALKEI--QNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~-~~~~Ei--~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
.||+|+||.||++.. .+++.||||.+.+... + ...+|. ..++...+||||+++++++..++..|+|||||.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999854 5689999998865321 1 122222 234445689999999999999999999999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.. ...+++.++..++.|++.||+|||+++|+||
T Consensus 81 ----------~~~L~~~i~~-----------------------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~ 121 (279)
T cd05633 81 ----------GGDLHYHLSQ-----------------------------HGVFSEKEMRFYATEIILGLEHMHNRFVVYR 121 (279)
T ss_pred ----------CCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCC
Confidence 4555444321 2346888999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .++|+|||++........ ....||..|+
T Consensus 122 dikp~Nil~~~~~--~~~l~dfg~~~~~~~~~~-------------------------------------~~~~~~~~y~ 162 (279)
T cd05633 122 DLKPANILLDEHG--HVRISDLGLACDFSKKKP-------------------------------------HASVGTHGYM 162 (279)
T ss_pred CCCHHHEEECCCC--CEEEccCCcceeccccCc-------------------------------------cCcCCCcCcc
Confidence 9999999997665 499999999875432111 0135899999
Q ss_pred cchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH---HH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 711 APEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER---DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 711 APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
|||.+.+ ..++.++||||+||++|+|++| ..||...... .. ..........+...++++.++|.+||+.||++|
T Consensus 163 aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 241 (279)
T cd05633 163 APEVLQKGTAYDSSADWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKR 241 (279)
T ss_pred CHHHhcCCCCCCchhhhHHHHHHHHHHHhC-CCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHh
Confidence 9999874 5579999999999999999996 5666432211 11 111111222334567899999999999999999
Q ss_pred c-----CHHHHHcCCCCCCccchh
Q 002343 786 P-----KAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 786 P-----Ta~evL~HPff~~~~~~~ 804 (934)
| +++++++||||.+.+...
T Consensus 242 ~~~~~~~~~~~~~h~~~~~~~~~~ 265 (279)
T cd05633 242 LGCLGRGAQEVKEHVFFKGIDWQQ 265 (279)
T ss_pred cCCCCCCHHHHHhCccccCCCHhH
Confidence 9 699999999998766443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=322.88 Aligned_cols=257 Identities=25% Similarity=0.379 Sum_probs=201.7
Q ss_pred eeeecccCcEEEEEE-EEecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
.+.||+|+|+.|--+ ..++|..+|||++.+.. ....++|+..+...-.|+||++++++|+++..+|||||
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfE------ 156 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFE------ 156 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEe------
Confidence 357999999999876 66889999999997653 24678999877778899999999999999999999999
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
.|.+|+|..++++ ...+++.++.++.++|+.||.|||.+||.|||||
T Consensus 157 ----Km~GGplLshI~~-----------------------------~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlK 203 (463)
T KOG0607|consen 157 ----KMRGGPLLSHIQK-----------------------------RKHFNEREASRVVKDIASALDFLHTKGIAHRDLK 203 (463)
T ss_pred ----cccCchHHHHHHH-----------------------------hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCC
Confidence 8888888887754 3446788899999999999999999999999999
Q ss_pred CCeEEEecCCCc-eEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 634 PQNVLISKDKSF-CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 634 P~NILl~~d~~~-~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
|+|||....+.+ -+|||||.|...+......... ++ +-..+.+|+..||||
T Consensus 204 PENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa-st---------------------------P~L~tPvGSAEfMAP 255 (463)
T KOG0607|consen 204 PENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA-ST---------------------------PELLTPVGSAEFMAP 255 (463)
T ss_pred ccceeecCCCCcCceeeeccccccccccCCCCCCC-CC---------------------------ccccCcccchhhcch
Confidence 999999654332 4899999987654433322211 10 112336899999999
Q ss_pred hhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCc----------------hhHHHHHHhhcccccccC----CC
Q 002343 713 EQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGES----------------FERDANIVKDRKDLFLVE----HI 767 (934)
Q Consensus 713 E~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----------------~~~~~~i~~~~~~~~~~~----~~ 767 (934)
|+.. ...|++++|.||||||+|-||+| .+||... .+.....++.....++.. .+
T Consensus 256 EVVd~fv~qA~~YDKrCDlwSLGvIlYImLsG-YpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS 334 (463)
T KOG0607|consen 256 EVVDVFVDQATFYDKRCDLWSLGVILYIMLSG-YPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHIS 334 (463)
T ss_pred hHHhhhccccccccccccHHHHHHHHHHHHhC-CCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhh
Confidence 9873 23589999999999999999996 7777321 111223344444444433 46
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.+++|||+.+|..|+..|.++.++++|||+.....
T Consensus 335 ~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 335 SEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred HHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 79999999999999999999999999999976544
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=317.85 Aligned_cols=247 Identities=23% Similarity=0.385 Sum_probs=191.9
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|++|+||++.. .+++.||+|.+.... .+...+|+. +++.++||||+++++++.+++..|+||||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEAR-VLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHH-HHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 56678999999999999854 468999999986432 133445665 67889999999999999999999999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+. +++|.+++... ....+++..+..++.|++.||.|||++||+
T Consensus 81 ~~----------~~~L~~~l~~~---------------------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~ 123 (256)
T cd08529 81 AE----------NGDLHKLLKMQ---------------------------RGRPLPEDQVWRFFIQILLGLAHLHSKKIL 123 (256)
T ss_pred CC----------CCcHHHHHHHh---------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 54 44444444321 023457788899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++. ++|+|||+++.+....... ....|++.
T Consensus 124 h~dl~~~nili~~~~~--~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 166 (256)
T cd08529 124 HRDIKSLNLFLDAYDN--VKIGDLGVAKLLSDNTNFA-----------------------------------NTIVGTPY 166 (256)
T ss_pred cCCCCcceEEEeCCCC--EEEcccccceeccCccchh-----------------------------------hccccCcc
Confidence 9999999999977654 8999999998765432110 11358899
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|+|++| ..||....... . .+..............++.++|.+||+.+|++||
T Consensus 167 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 245 (256)
T cd08529 167 YLSPELCEDKPYNEKSDVWALGVVLYECCTG-KHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRP 245 (256)
T ss_pred ccCHHHhcCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCc
Confidence 9999999999999999999999999999996 66776543322 1 2222222222234567899999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
++.++++|||+
T Consensus 246 ~~~~ll~~~~~ 256 (256)
T cd08529 246 DTFQLLRNPSL 256 (256)
T ss_pred CHHHHhhCCCC
Confidence 99999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=339.77 Aligned_cols=247 Identities=27% Similarity=0.428 Sum_probs=188.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|...+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELV-LMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHH-HHHhcCCCCCcceeeeeccCCCcc
Confidence 3567899999999999999999854 578999999986432 123456665 78889999999999988654
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
...|+|||+|.++|.+.+.. .+++.++..++.|++.
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~------------------------------------------~l~~~~~~~~~~ql~~ 129 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQM------------------------------------------DLDHERMSYLLYQMLC 129 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhh------------------------------------------cCCHHHHHHHHHHHHH
Confidence 35799999988776655421 1456778899999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++........
T Consensus 130 aL~~LH~~gi~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~--------------------------------- 174 (353)
T cd07850 130 GIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFMM--------------------------------- 174 (353)
T ss_pred HHHHHHhCCeeeCCCCHHHEEECCCC--CEEEccCccceeCCCCCCC---------------------------------
Confidence 99999999999999999999997665 4899999999865432110
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHH--------------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIV-------------------- 755 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~-------------------- 755 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| ..||..... .. ..++
T Consensus 175 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 175 ---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG-TVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred ---CCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 013578999999999999999999999999999999996 566643211 10 0000
Q ss_pred --hhccc-------------cc-------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 756 --KDRKD-------------LF-------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 756 --~~~~~-------------~~-------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
..... .. ....++++++||.+||+.||++|||+.|+|+||||.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 00000 00 001235689999999999999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=342.37 Aligned_cols=286 Identities=23% Similarity=0.320 Sum_probs=192.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~ 541 (934)
+.|.+.+.||+|+||+||++.. .++..||||++..... +...+|+. ++..+ +|||||++++++.+.+.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~-il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELK-VLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHH-HHHHhcCCcceeeeeeeeccCCc
Confidence 4688899999999999998743 2356899999864332 24556776 55656 89999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHH--------------HHHhhhhccchhHHHHHHhh-------------------cc
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFE--------------EQLNAKEQDSNLLNEVRIRL-------------------LP 587 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~--------------~~L~~~~~~~~~~~~~~~~~-------------------~~ 587 (934)
.|+|||||++ +|.+++....+... ..+.........+....... ..
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999996653 45554432211100 00000000000000000000 00
Q ss_pred cc--cchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCccc
Q 002343 588 VM--ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL 665 (934)
Q Consensus 588 ~~--~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~ 665 (934)
.. .............+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccceeccCccccc
Confidence 00 000000111123578899999999999999999999999999999999997654 48999999998764432111
Q ss_pred ccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC
Q 002343 666 TQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG 745 (934)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~ 745 (934)
.. ....++..|+|||++.+..++.++|||||||++|||++++.+||.
T Consensus 272 ~~---------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 272 VK---------------------------------GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred cc---------------------------------CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 00 012356789999999999999999999999999999997788886
Q ss_pred CchhH--HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 746 ESFER--DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 746 ~~~~~--~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
..... ....+... ....+...+.++.+||.+||+.||++||++.++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 319 GMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred CCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 54321 22222222 122223346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=324.39 Aligned_cols=246 Identities=23% Similarity=0.357 Sum_probs=186.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||+|+||.||++.. .+++.||+|++..... ....+|+. ++..++||||+++++++..++..|+||||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~-~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIF-MVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHH-HHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4688889999999999999854 5789999999864422 23445554 77889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
++ +|+|.+++.. ...+++.++..++.|++.||+|||++||+
T Consensus 88 ~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 128 (267)
T cd06646 88 CG----------GGSLQDIYHV-----------------------------TGPLSELQIAYVCRETLQGLAYLHSKGKM 128 (267)
T ss_pred CC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 55 4444444321 23467788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||+++.+....... ....|++.
T Consensus 129 H~dl~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 171 (267)
T cd06646 129 HRDIKGANILLTDNG--DVKLADFGVAAKITATIAKR-----------------------------------KSFIGTPY 171 (267)
T ss_pred ccCCCHHHEEECCCC--CEEECcCccceeeccccccc-----------------------------------CccccCcc
Confidence 999999999996655 49999999998764321100 01358899
Q ss_pred cccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhccc-c---cccCCCHHHHHHHHHccc
Q 002343 709 WQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKD-L---FLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 709 Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~-~---~~~~~~~e~~dLI~~~L~ 779 (934)
|+|||.+. ...++.++|||||||++|||++| .+||.... .... .+...... . .....+.++.+||.+||+
T Consensus 172 y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 250 (267)
T cd06646 172 WMAPEVAAVEKNGGYNQLCDIWAVGITAIELAEL-QPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLT 250 (267)
T ss_pred ccCHhHcccccCCCCcchhhHHHHHHHHHHHHhC-CCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhh
Confidence 99999985 34578899999999999999997 44553322 1111 11111101 0 112345789999999999
Q ss_pred CCCCCCcCHHHHHcCCC
Q 002343 780 PNPDLRPKAQNVLNHPF 796 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPf 796 (934)
.||++|||++++++|+|
T Consensus 251 ~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 251 KNPKKRPTAERLLTHLF 267 (267)
T ss_pred CChhhCcCHHHHhcCCC
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=326.26 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=187.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|++|+||++.. .+++.||||.+..... ....+|+. +++.++||||+++++++.+++..|+|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREAS-LLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHH-HHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 4578889999999999999854 4689999999864321 23456665 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|+.++|.+++... ...+++..++.++.||+.||.|||+++|
T Consensus 84 ~~~~~L~~~~~~~---------------------------------------~~~~~~~~~~~~~~ql~~al~~lH~~~i 124 (291)
T cd07844 84 YLDTDLKQYMDDC---------------------------------------GGGLSMHNVRLFLFQLLRGLAYCHQRRV 124 (291)
T ss_pred cCCCCHHHHHHhC---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8876665544210 1245778889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++......... ....++.
T Consensus 125 ~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 167 (291)
T cd07844 125 LHRDLKPQNLLISERG--ELKLADFGLARAKSVPSKTY-----------------------------------SNEVVTL 167 (291)
T ss_pred ecccCCHHHEEEcCCC--CEEECccccccccCCCCccc-----------------------------------ccccccc
Confidence 9999999999997665 49999999987543211100 0124688
Q ss_pred ccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHH-HHhh---c------------------cc--
Q 002343 708 GWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDAN-IVKD---R------------------KD-- 760 (934)
Q Consensus 708 ~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~-i~~~---~------------------~~-- 760 (934)
.|+|||++.+ ..++.++||||+||++|+|++| .+||..... .... +... . ..
T Consensus 168 ~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (291)
T cd07844 168 WYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG-RPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFY 246 (291)
T ss_pred ccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhC-CCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccccc
Confidence 9999999876 4579999999999999999996 677754321 1111 0000 0 00
Q ss_pred --c------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 --L------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 --~------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
. .......++.++|.+||+.||++|||+.++++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 247 PPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0 001112678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=324.49 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=186.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||.||++.. ..+..||+|.+..... ....+|+. .+..++||||+++++++..++..|+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEAL-TLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHH-HHhcCCCCCcCeEEEEEecCCCcEE
Confidence 4578889999999999999743 2467899999875432 23345655 6777899999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||+ +|+|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 84 v~e~~~----------~~~L~~~l~~~----------------------------~~~l~~~~~~~~~~~i~~al~~lH~ 125 (266)
T cd05064 84 VTEYMS----------NGALDSFLRKH----------------------------EGQLVAGQLMGMLPGLASGMKYLSE 125 (266)
T ss_pred EEEeCC----------CCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999555 44554444321 1346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+|++|||.+........... ....
T Consensus 126 ~~iiH~dikp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~----------------------------------~~~~ 169 (266)
T cd05064 126 MGYVHKGLAAHKVLVNSDL--VCKISGFRRLQEDKSEAIYTT----------------------------------MSGK 169 (266)
T ss_pred CCEeeccccHhhEEEcCCC--cEEECCCcccccccccchhcc----------------------------------cCCC
Confidence 9999999999999996654 589999998765322111000 0134
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||++.+..++.++|||||||++||+++.|.+||..... .....+... ....+...+..+.+++.+||+.+|
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p 249 (266)
T cd05064 170 SPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKER 249 (266)
T ss_pred CceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 677899999999999999999999999999988755778765432 222322222 222334456789999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
.+||+++++++
T Consensus 250 ~~RP~~~~i~~ 260 (266)
T cd05064 250 GERPRFSQIHS 260 (266)
T ss_pred hhCCCHHHHHH
Confidence 99999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=326.58 Aligned_cols=263 Identities=25% Similarity=0.376 Sum_probs=201.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
..|...+.||.|+||.||++.. .+++.||||.+...... ...+|++ +++.++||||+++++++.+++..|+|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 3466678899999999999854 56889999998754322 2344554 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|++ +|+|.+++. ...+++.++..++.|++.||+|||+.++
T Consensus 83 ~~~----------~~~L~~~i~------------------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06640 83 YLG----------GGSALDLLR------------------------------AGPFDEFQIATMLKEILKGLDYLHSEKK 122 (277)
T ss_pred cCC----------CCcHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 554 444444332 2335677888999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+|+||+|+||+++.++. ++|+|||++..+....... ....|+.
T Consensus 123 vH~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 165 (277)
T cd06640 123 IHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKR-----------------------------------NTFVGTP 165 (277)
T ss_pred cCcCCChhhEEEcCCCC--EEEcccccceeccCCcccc-----------------------------------ccccCcc
Confidence 99999999999976654 8999999997664322110 0134788
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++.+..++.++|+|||||++|||++| .+||....... ...+ ....+......+.++.++|.+||+.+|++|
T Consensus 166 ~y~apE~~~~~~~~~~~Dv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (277)
T cd06640 166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKG-EPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFR 244 (277)
T ss_pred cccCHhHhccCCCccHHHHHHHHHHHHHHHHC-CCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccC
Confidence 99999999988899999999999999999996 66775433222 1111 112222223345689999999999999999
Q ss_pred cCHHHHHcCCCCCCccchhhhhhhhcccc
Q 002343 786 PKAQNVLNHPFFWTADTRLSFLRDVSDRV 814 (934)
Q Consensus 786 PTa~evL~HPff~~~~~~~~fl~~~sd~~ 814 (934)
|++.++++||||.....+...+.++.+|.
T Consensus 245 p~~~~il~~~~~~~~~~~~~~~~~~~~~~ 273 (277)
T cd06640 245 PTAKELLKHKFIVKNAKKTSYLTELIDRF 273 (277)
T ss_pred cCHHHHHhChHhhhcchhhhHHHHHHHHH
Confidence 99999999999988777776676665554
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=319.90 Aligned_cols=245 Identities=22% Similarity=0.342 Sum_probs=188.4
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.|.+.+.||+|+||.||++...++..+|+|.+..... +...+|+. +++.++||||+++++++.+.+..|+|||||.
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~- 82 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAK-VMMKLSHPKLVQLYGVCTQQKPLYIVTEFME- 82 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHH-HHHHCCCCCceeEEEEEccCCCEEEEEEcCC-
Confidence 3667789999999999998777778999998865432 34556665 7788999999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.++++.. ...+++..++.++.|++.||+|||++||+|||
T Consensus 83 ---------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 125 (256)
T cd05114 83 ---------NGCLLNYLRQR----------------------------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRD 125 (256)
T ss_pred ---------CCcHHHHHHhC----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 34444443321 12356778899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||+++.++ .+||+|||+++.......... ....++..|+|
T Consensus 126 l~p~ni~i~~~~--~~kl~d~g~~~~~~~~~~~~~----------------------------------~~~~~~~~y~a 169 (256)
T cd05114 126 LAARNCLVSSTG--VVKVSDFGMTRYVLDDEYTSS----------------------------------SGAKFPVKWSP 169 (256)
T ss_pred cCcceEEEcCCC--eEEECCCCCccccCCCceecc----------------------------------CCCCCchhhCC
Confidence 999999996554 599999999986543221100 00235678999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||++.+..++.++|||||||++|||++++.+||...... ....+. ......+...+.++.+|+.+||+.||++||+++
T Consensus 170 PE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~ 249 (256)
T cd05114 170 PEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFA 249 (256)
T ss_pred hhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 999998889999999999999999999668888654322 222222 222222334567899999999999999999999
Q ss_pred HHHc
Q 002343 790 NVLN 793 (934)
Q Consensus 790 evL~ 793 (934)
++++
T Consensus 250 ~l~~ 253 (256)
T cd05114 250 ELLR 253 (256)
T ss_pred HHHH
Confidence 9985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=337.04 Aligned_cols=253 Identities=26% Similarity=0.402 Sum_probs=189.6
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-----
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD----- 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~----- 540 (934)
+++.|.+.+.||+|+||+||++. ..+|+.||||++..... ....+|+. +++.++||||+++++++....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIK-ILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHH-HHHhCCCCCcCchhheeecccccccc
Confidence 46789999999999999999984 46789999999864221 23455665 778889999999999876543
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|+++|+|.++|.+++ ....+++..++.++.||+.||+
T Consensus 82 ~~~lv~e~~~~~l~~~~-----------------------------------------~~~~l~~~~~~~i~~ql~~aL~ 120 (336)
T cd07849 82 DVYIVQELMETDLYKLI-----------------------------------------KTQHLSNDHIQYFLYQILRGLK 120 (336)
T ss_pred eEEEEehhcccCHHHHH-----------------------------------------hcCCCCHHHHHHHHHHHHHHHH
Confidence 58999998876554433 1234677889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++........... .
T Consensus 121 ~LH~~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~--------------------------------~ 166 (336)
T cd07849 121 YIHSANVLHRDLKPSNLLLNTNC--DLKICDFGLARIADPEHDHTGF--------------------------------L 166 (336)
T ss_pred HHHhCCeeccCCCHHHEEECCCC--CEEECcccceeeccccccccCC--------------------------------c
Confidence 99999999999999999997655 4999999999875432211100 0
Q ss_pred ecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH-----------------------
Q 002343 701 TVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV----------------------- 755 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~----------------------- 755 (934)
....||+.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .....+
T Consensus 167 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
T cd07849 167 TEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN-RPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNY 245 (336)
T ss_pred CCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhH
Confidence 11468999999998765 4679999999999999999996 677743211 110000
Q ss_pred -hhc---ccc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 756 -KDR---KDL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 756 -~~~---~~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
... ... .....++++.+||.+||+.||++|||+.++++||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 246 IKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 000 000 012345789999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=323.00 Aligned_cols=251 Identities=26% Similarity=0.398 Sum_probs=190.6
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC---------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
|...+.||+|+||.||++. ..+++.||+|++.... .+...+|+. +++.++||||+++++++.+.+..++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIR-LMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHH-HHHHcCCCceehhhceeccCCeEEE
Confidence 4556789999999999974 4678999999986433 123445555 7788999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|. +++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 81 v~e~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~ql~~al~~LH~ 121 (268)
T cd06630 81 FVEWMA----------GGSVSHLLSK-----------------------------YGAFKEAVIINYTEQLLRGLSYLHE 121 (268)
T ss_pred EEeccC----------CCcHHHHHHH-----------------------------hCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999655 4444444421 2346778889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+||+++.++. .+||+|||++..+.......... .....
T Consensus 122 ~~i~H~~i~~~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~~~~-------------------------------~~~~~ 169 (268)
T cd06630 122 NQIIHRDVKGANLLIDSTGQ-RLRIADFGAAARLAAKGTGAGEF-------------------------------QGQLL 169 (268)
T ss_pred CCeecCCCCHHHEEEcCCCC-EEEEcccccccccccccccCCcc-------------------------------ccccc
Confidence 99999999999999975543 58999999998775432111000 01135
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHH-h----hcccccccCCCHHHHHHHHHcc
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIV-K----DRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~-~----~~~~~~~~~~~~e~~dLI~~~L 778 (934)
||..|+|||++.+..++.++||||+||++|+|++| ..||.... ....... . ......+...++++.+++.+||
T Consensus 170 ~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 248 (268)
T cd06630 170 GTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA-KPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCL 248 (268)
T ss_pred cccceeCHhHhccCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHc
Confidence 88999999999888899999999999999999996 66765322 1111111 1 1112223345678999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~ 798 (934)
..+|.+||++.++++||||.
T Consensus 249 ~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 249 ELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCcccCcCHHHHhcCcccC
Confidence 99999999999999999983
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=329.05 Aligned_cols=251 Identities=26% Similarity=0.374 Sum_probs=186.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC------
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~------ 540 (934)
+.|.+.+.||+|+||+||++.. .+++.||||.+..... ....+|+. +++.++||||+++++++.+..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHH-HHHhCCCCCccceEEEEecccccccCC
Confidence 4588899999999999999854 5689999998864321 23456665 788899999999999987654
Q ss_pred --eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 --~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..|+|||||.++|.+++... ...+++.+++.++.||+.|
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~a 131 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNK---------------------------------------NVKFTLSEIKKVMKMLLNG 131 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhc---------------------------------------ccCCCHHHHHHHHHHHHHH
Confidence 45999999887665544210 1246788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||++..+..........
T Consensus 132 l~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~------------------------------ 179 (310)
T cd07865 132 LYYIHRNKILHRDMKAANILITKDG--ILKLADFGLARAFSLSKNSKPNR------------------------------ 179 (310)
T ss_pred HHHHHHCCeeccCCCHHHEEECCCC--cEEECcCCCcccccCCcccCCCC------------------------------
Confidence 9999999999999999999997655 59999999998765432211000
Q ss_pred eeecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-----------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK----------------- 759 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~----------------- 759 (934)
.+...++..|+|||.+.+.. ++.++|||||||++|+|++| .+||..... .....+....
T Consensus 180 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
T cd07865 180 -YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR-SPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELF 257 (310)
T ss_pred -ccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhh
Confidence 01135788999999987654 68899999999999999996 566644321 1111111000
Q ss_pred ---------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 ---------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 ---------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.......++.+.+||.+||+.||.+|||++++++||||
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 258 KKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00000124578899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=326.92 Aligned_cols=233 Identities=20% Similarity=0.260 Sum_probs=180.2
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEEEEEec
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSLER 548 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~yLVmE~ 548 (934)
..||+|++|.||++ ..+|+.||||++.+... +...+|+. ++..++|||||+++|++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKG-IFNNKEVIIRTFKKFHKGHKVLIDITENEIK-NLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEE-EECCEEEEEEeccccccccHHHHHHHHHHHH-HHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46999999999995 45899999999875432 22335655 7888999999999999877 4578999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
|. +|+|.+++.. ...+++.....++.|++.||+|||+ .++
T Consensus 104 ~~----------~g~L~~~l~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~ 144 (283)
T PHA02988 104 CT----------RGYLREVLDK-----------------------------EKDLSFKTKLDMAIDCCKGLYNLYKYTNK 144 (283)
T ss_pred CC----------CCcHHHHHhh-----------------------------CCCCChhHHHHHHHHHHHHHHHHHhcCCC
Confidence 55 4555555432 1235667788999999999999998 499
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||+++.+..... ...||.
T Consensus 145 ~Hrdlkp~nill~~~~--~~kl~dfg~~~~~~~~~~--------------------------------------~~~~~~ 184 (283)
T PHA02988 145 PYKNLTSVSFLVTENY--KLKIICHGLEKILSSPPF--------------------------------------KNVNFM 184 (283)
T ss_pred CCCcCChhhEEECCCC--cEEEcccchHhhhccccc--------------------------------------cccCcc
Confidence 9999999999997665 499999999986543211 135889
Q ss_pred ccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhc-ccccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDR-KDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~-~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|+|||++.+ ..++.++|||||||++|||++| ..||....... ...+ ... ....+...++++.+||.+||+.||
T Consensus 185 ~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp 263 (283)
T PHA02988 185 VYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTG-KIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDS 263 (283)
T ss_pred cccCHHHhhhccccccchhhhhHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCc
Confidence 9999999976 6889999999999999999995 77887543322 2222 222 222233567899999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
++|||++++++
T Consensus 264 ~~Rps~~ell~ 274 (283)
T PHA02988 264 IKRPNIKEILY 274 (283)
T ss_pred ccCcCHHHHHH
Confidence 99999999985
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=326.07 Aligned_cols=249 Identities=26% Similarity=0.330 Sum_probs=188.6
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
|.+.+.||+|+||+||++.. .++..+|+|.+..... +...+|+. +++.++||||+++++++..++..|+||||+.
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEID-ILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHH-HHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 45667899999999999855 4578899999865433 23445655 7788899999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+ |+|..++.. ...++++..+..++.||+.||+|||+.||+||
T Consensus 86 ~----------~~l~~~~~~----------------------------~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~ 127 (282)
T cd06643 86 G----------GAVDAVMLE----------------------------LERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127 (282)
T ss_pred C----------CcHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 4 333333221 02346788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||++.......... ....||..|+
T Consensus 128 dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~ 170 (282)
T cd06643 128 DLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRR-----------------------------------DSFIGTPYWM 170 (282)
T ss_pred CCCcccEEEccCC--CEEEcccccccccccccccc-----------------------------------cccccccccc
Confidence 9999999997665 49999999987653321100 0135899999
Q ss_pred cchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchh-H-HHHHHhhccc--ccccCCCHHHHHHHHHcccCC
Q 002343 711 APEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-R-DANIVKDRKD--LFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 711 APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~-~~~i~~~~~~--~~~~~~~~e~~dLI~~~L~~D 781 (934)
|||++. +..++.++|||||||++|||++| .+||..... . ...+...... ..+...+.++.+||.+||+.|
T Consensus 171 aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (282)
T cd06643 171 APEVVMCETSKDRPYDYKADVWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKN 249 (282)
T ss_pred CHhhccccCCCCCCCCccchhhhHHHHHHHHccC-CCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCC
Confidence 999984 34578899999999999999996 667754322 2 1222222211 122345678999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCc
Q 002343 782 PDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~ 800 (934)
|.+||+++++++||||...
T Consensus 250 p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 250 VDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred hhhCcCHHHHhcCCCEecc
Confidence 9999999999999999654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=326.36 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=191.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
...+.|.+.+.||+|+||.||++.. .+++.||+|.+.....+ ...+|+. +++.++||||+++++++..++..|+|
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIE-ILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHH-HHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 3456788899999999999999855 45899999998755432 3344554 67889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||+.+ |+|..++.+. ...+++..++.++.||+.||+|||++
T Consensus 88 ~e~~~~----------~~l~~~~~~~----------------------------~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 88 IEFCPG----------GAVDAIMLEL----------------------------DRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred EecCCC----------CcHHHHHHhh----------------------------cCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 996654 3333332211 23467788999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|+||||||+||+++.++. +||+|||++.......... ....|
T Consensus 130 ~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~ 172 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGD--IKLADFGVSAKNVKTLQRR-----------------------------------DSFIG 172 (292)
T ss_pred CeeecCCCcceEEEcCCCC--EEEccCccceecccccccc-----------------------------------ceecC
Confidence 9999999999999976554 9999999987543211100 01357
Q ss_pred CCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhccc--ccccCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKD--LFLVEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~--~~~~~~~~e~~dLI~~ 776 (934)
++.|+|||++. ...++.++|||||||++|||++| .+||.... .... .+...... ......+.++.+||.+
T Consensus 173 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 251 (292)
T cd06644 173 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKT 251 (292)
T ss_pred CccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcC-CCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHH
Confidence 88999999985 34568899999999999999997 66665432 2222 22211111 1123445789999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
||+.||++||+++++++||||...
T Consensus 252 ~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 252 ALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred HhcCCcccCcCHHHHhcCcccccc
Confidence 999999999999999999999654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=326.35 Aligned_cols=246 Identities=28% Similarity=0.431 Sum_probs=187.1
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|...+.||+|++|+||++.. .+|+.||||++..... ....+|++ +++.++||||+++++++.+++..|+||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS-LLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHH-HHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 66788999999999999854 4689999998864321 23456665 78889999999999999999999999998
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++... ....+++.+++.++.||+.||+|||+++|+
T Consensus 81 ~~~~l~~~~~~~--------------------------------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~ 122 (284)
T cd07860 81 LHQDLKKFMDAS--------------------------------------PLSGIPLPLIKSYLFQLLQGLAFCHSHRVL 122 (284)
T ss_pred cccCHHHHHHhC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 766555544210 123467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||+++.+....... +...+++.
T Consensus 123 H~~l~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 165 (284)
T cd07860 123 HRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTY-----------------------------------THEVVTLW 165 (284)
T ss_pred cCCCCHHHEEECCCC--CEEEeeccchhhcccCcccc-----------------------------------cccccccc
Confidence 999999999997665 48999999987654321110 11347889
Q ss_pred cccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-H-HHHHHhhccc-------------------------
Q 002343 709 WQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE-R-DANIVKDRKD------------------------- 760 (934)
Q Consensus 709 Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~-~~~i~~~~~~------------------------- 760 (934)
|+|||++.+.. ++.++|||||||++|+|+|| ..||..... . ...+......
T Consensus 166 y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07860 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ 244 (284)
T ss_pred ccCCeEEecCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccccccc
Confidence 99999987655 58899999999999999997 556643221 1 1111110000
Q ss_pred ---ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ---LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ---~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......+++++++|.+||+.||++|||++++++||||
T Consensus 245 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 245 DFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0012345788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=330.00 Aligned_cols=250 Identities=27% Similarity=0.370 Sum_probs=190.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yL 544 (934)
+.|.+.+.||+|+||+||++.. .+|+.||+|++..... ....+|+. ++..++|+||+++++++.+. +..|+
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREIT-LLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHH-HHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 5688889999999999999854 5689999999864321 13456765 77889999999999998765 56899
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|.++|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 86 v~e~~~~~l~~~l~~~---------------------------------------~~~l~~~~~~~~~~qi~~~l~~lH~ 126 (309)
T cd07845 86 VMEYCEQDLASLLDNM---------------------------------------PTPFSESQVKCLMLQLLRGLQYLHE 126 (309)
T ss_pred EEecCCCCHHHHHHhc---------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999887776665321 1345778899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.||+||||||+|||++.++ .+||+|||+++.+....... +...
T Consensus 127 ~~i~H~dl~p~nil~~~~~--~~kL~dfg~~~~~~~~~~~~-----------------------------------~~~~ 169 (309)
T cd07845 127 NFIIHRDLKVSNLLLTDKG--CLKIADFGLARTYGLPAKPM-----------------------------------TPKV 169 (309)
T ss_pred CCeecCCCCHHHEEECCCC--CEEECccceeeecCCccCCC-----------------------------------Cccc
Confidence 9999999999999997665 49999999998765422110 0124
Q ss_pred CCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcc-------------------ccc
Q 002343 705 GSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRK-------------------DLF 762 (934)
Q Consensus 705 GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~-------------------~~~ 762 (934)
+++.|+|||++.+ ..++.++|||||||++|||++| .+||...... ... +..... ...
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
T cd07845 170 VTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH-KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLP 248 (309)
T ss_pred ccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccccccc
Confidence 6788999999876 4579999999999999999996 6677543221 111 111000 000
Q ss_pred ----------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 763 ----------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 763 ----------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
....++++.+||.+||+.||++|||+++++.||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 249 KQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred CCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence 01236788999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=319.02 Aligned_cols=248 Identities=27% Similarity=0.424 Sum_probs=191.5
Q ss_pred ceEEEeeeecccCcEEEEEEEEec-CcEEEEEEeecCC-hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||.||++.... ++.||+|.+.... .+...+|+. +++.++||||+++++++.++...|+++|+|.
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~-~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEIS-ILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHH-HHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 457778899999999999986554 8899999986543 234455655 6778899999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+ ++|.+++... ...+++..++.++.|++.||.|||+.+|+||
T Consensus 82 ~----------~~L~~~l~~~----------------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~ 123 (256)
T cd06612 82 A----------GSVSDIMKIT----------------------------NKTLTEEEIAAILYQTLKGLEYLHSNKKIHR 123 (256)
T ss_pred C----------CcHHHHHHhC----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 3 3444433211 2346788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||+|+||+++.++ .+||+|||++..+....... ....|+..|+
T Consensus 124 dl~~~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~ 166 (256)
T cd06612 124 DIKAGNILLNEEG--QAKLADFGVSGQLTDTMAKR-----------------------------------NTVIGTPFWM 166 (256)
T ss_pred CCCcceEEECCCC--cEEEcccccchhcccCcccc-----------------------------------ccccCCcccc
Confidence 9999999997665 48999999998765432110 0134788999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH-hh-cccc--cccCCCHHHHHHHHHcccCCCCCCc
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV-KD-RKDL--FLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~-~~-~~~~--~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|||++.+..++.++|||||||++|+|++| .+||........... .. .... .......++.++|.+||+.||++||
T Consensus 167 ~PE~~~~~~~~~~~Di~s~G~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 245 (256)
T cd06612 167 APEVIQEIGYNNKADIWSLGITAIEMAEG-KPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERP 245 (256)
T ss_pred CHHHHhcCCCCchhhHHHHHHHHHHHHhC-CCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCc
Confidence 99999988999999999999999999996 667765433222111 11 1111 1122456899999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
|+.++++||||
T Consensus 246 s~~~il~~~~~ 256 (256)
T cd06612 246 SAIQLLQHPFI 256 (256)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=340.75 Aligned_cols=231 Identities=29% Similarity=0.461 Sum_probs=183.1
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhHH
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIY 558 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~ 558 (934)
+=||.|+-|.||+ +...++.||||+++. ....+|+ -++.++||||+.+.|+|...-.+|||||||..
T Consensus 130 eWlGSGaQGAVF~-Grl~netVAVKKV~e----lkETdIK-HLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~------- 196 (904)
T KOG4721|consen 130 EWLGSGAQGAVFL-GRLHNETVAVKKVRE----LKETDIK-HLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ------- 196 (904)
T ss_pred hhhccCcccceee-eeccCceehhHHHhh----hhhhhHH-HHHhccCcceeeEeeeecCCceeEEeeecccc-------
Confidence 4599999999998 667789999998742 2233454 67889999999999999999999999998873
Q ss_pred hhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEE
Q 002343 559 VLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL 638 (934)
Q Consensus 559 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NIL 638 (934)
|-|.+.|+. .+.+....+..+..+||.|+.|||.+.|||||||.-|||
T Consensus 197 ---GqL~~VLka-----------------------------~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiL 244 (904)
T KOG4721|consen 197 ---GQLYEVLKA-----------------------------GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNIL 244 (904)
T ss_pred ---ccHHHHHhc-----------------------------cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceE
Confidence 334443332 244566678899999999999999999999999999999
Q ss_pred EecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccC
Q 002343 639 ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG 718 (934)
Q Consensus 639 l~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~ 718 (934)
|+.+.. +||+|||-++.+..... .| .++||..|||||++.+.
T Consensus 245 Is~~d~--VKIsDFGTS~e~~~~ST-------kM-----------------------------SFaGTVaWMAPEvIrne 286 (904)
T KOG4721|consen 245 ISYDDV--VKISDFGTSKELSDKST-------KM-----------------------------SFAGTVAWMAPEVIRNE 286 (904)
T ss_pred eeccce--EEeccccchHhhhhhhh-------hh-----------------------------hhhhhHhhhCHHHhhcC
Confidence 987764 99999999987654311 11 16899999999999999
Q ss_pred CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhh----cccc-cccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 719 RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD----RKDL-FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 719 ~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~----~~~~-~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
+.+.|+||||||||||||||| ..||.+..... |+-. .-.+ .+..++.-++=||++||+..|..||++.++|.
T Consensus 287 PcsEKVDIwSfGVVLWEmLT~-EiPYkdVdssA--IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~ 363 (904)
T KOG4721|consen 287 PCSEKVDIWSFGVVLWEMLTG-EIPYKDVDSSA--IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILL 363 (904)
T ss_pred CcccccceehhHHHHHHHHhc-CCCccccchhe--eEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHH
Confidence 999999999999999999995 88887643321 1111 1112 23344567888999999999999999999999
Q ss_pred CC
Q 002343 794 HP 795 (934)
Q Consensus 794 HP 795 (934)
|=
T Consensus 364 Hl 365 (904)
T KOG4721|consen 364 HL 365 (904)
T ss_pred HH
Confidence 94
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=327.82 Aligned_cols=251 Identities=29% Similarity=0.380 Sum_probs=189.1
Q ss_pred EeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 477 FNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
..+.||+|+||+||++. ..+++.||||.+..... ....+|+..+.+..+||||+++++++.+++..|++||+|..
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~ 87 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI 87 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence 45689999999999974 45689999999865432 23456666444444699999999999999999999999887
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-CCccc
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHR 630 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-gIVHR 630 (934)
++.++... +.. .....+++..+..++.|++.||+|||+. +|+||
T Consensus 88 ~l~~l~~~--------~~~---------------------------~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~ 132 (288)
T cd06616 88 SLDKFYKY--------VYE---------------------------VLKSVIPEEILGKIAVATVKALNYLKEELKIIHR 132 (288)
T ss_pred CHHHHHHH--------HHH---------------------------hhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeecc
Confidence 76554421 000 0124578889999999999999999975 99999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++.+...... ....||..|+
T Consensus 133 dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~------------------------------------~~~~~~~~y~ 174 (288)
T cd06616 133 DVKPSNILLDRNG--NIKLCDFGISGQLVDSIAK------------------------------------TRDAGCRPYM 174 (288)
T ss_pred CCCHHHEEEccCC--cEEEeecchhHHhccCCcc------------------------------------ccccCccCcc
Confidence 9999999997665 4999999999865432211 0135889999
Q ss_pred cchhcccC---CCcccccccchhhhhHHhhcCCCCCCCCchhHH---HHHHhhccc-cc---ccCCCHHHHHHHHHcccC
Q 002343 711 APEQLLQG---RQTRAIDLFSLGCILFFCITGGKHPYGESFERD---ANIVKDRKD-LF---LVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 711 APE~l~~~---~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~---~~i~~~~~~-~~---~~~~~~e~~dLI~~~L~~ 780 (934)
|||++.+. .++.++|||||||++|+|++| .+||....... ......... .. ....+.++.+||.+||+.
T Consensus 175 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 253 (288)
T cd06616 175 APERIDPSARDGYDVRSDVWSLGITLYEVATG-KFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIK 253 (288)
T ss_pred CHHHhccccccCCcchhhhhHHHHHHHHHHhC-CCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccC
Confidence 99999876 689999999999999999995 77776533211 111111111 11 123567899999999999
Q ss_pred CCCCCcCHHHHHcCCCCCCcc
Q 002343 781 NPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~~~~ 801 (934)
||++|||++++++||||+...
T Consensus 254 ~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 254 DESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred ChhhCcCHHHHhcChhhhchh
Confidence 999999999999999996533
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=327.61 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=194.2
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
....+.|...+.||+|+||+||++.. .+|+.||+|++..... ....+|+. +++.++||||+++++++.+.+.
T Consensus 11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQQLRHPNTIEYKGCYLREHT 89 (307)
T ss_pred CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHH-HHHhCCCCCEEEEEEEEEeCCe
Confidence 44556788889999999999999855 4689999999864321 23455665 7788999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||.+++.+++... ...+++.++..++.||+.||.|
T Consensus 90 ~~lv~e~~~g~l~~~~~~~---------------------------------------~~~l~~~~~~~~~~ql~~~L~~ 130 (307)
T cd06607 90 AWLVMEYCLGSASDILEVH---------------------------------------KKPLQEVEIAAICHGALQGLAY 130 (307)
T ss_pred EEEEHHhhCCCHHHHHHHc---------------------------------------ccCCCHHHHHHHHHHHHHHHHH
Confidence 9999998877766554211 2346778889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+.+|+||||+|+||+++.++ .+||+|||++.......
T Consensus 131 LH~~~i~H~dl~p~nIl~~~~~--~~kL~dfg~~~~~~~~~--------------------------------------- 169 (307)
T cd06607 131 LHSHERIHRDIKAGNILLTEPG--TVKLADFGSASLVSPAN--------------------------------------- 169 (307)
T ss_pred HHHCCceecCCCcccEEECCCC--CEEEeecCcceecCCCC---------------------------------------
Confidence 9999999999999999997665 49999999987543211
Q ss_pred cCCCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcc-cccccCCCHHHHHHHH
Q 002343 702 VGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRK-DLFLVEHIPEAVDLFT 775 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~-~~~~~~~~~e~~dLI~ 775 (934)
...|++.|+|||++. .+.++.++|||||||++|||++| .+||.... .... .+..... .......+.++.+||.
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 248 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVD 248 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC-CCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHH
Confidence 134788999999884 35678999999999999999997 55664432 2221 2221111 1122234678999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+||+.||++||++.+++.||||....
T Consensus 249 ~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 249 SCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999999999999997543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=323.81 Aligned_cols=250 Identities=28% Similarity=0.397 Sum_probs=194.5
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+|.+.+.||.|+||.||++.. .+++.||+|.+..... ....+|++ +++.++||||+++++++.++...|+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQ-FLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHH-HHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 466678899999999999854 4689999999865432 23445655 77888999999999999999999999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+. +++|.+++. ...+++..++.++.|++.||.|||+++|+
T Consensus 81 ~~----------~~~L~~~~~------------------------------~~~~~~~~~~~~~~ql~~~l~~lh~~~i~ 120 (274)
T cd06609 81 CG----------GGSCLDLLK------------------------------PGKLDETYIAFILREVLLGLEYLHEEGKI 120 (274)
T ss_pred eC----------CCcHHHHHh------------------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 54 444444432 12467788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||+|+||+++.++. ++|+|||+++.+....... ....|++.
T Consensus 121 h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~ 163 (274)
T cd06609 121 HRDIKAANILLSEEGD--VKLADFGVSGQLTSTMSKR-----------------------------------NTFVGTPF 163 (274)
T ss_pred cCCCCHHHEEECCCCC--EEEcccccceeeccccccc-----------------------------------ccccCCcc
Confidence 9999999999976654 8999999998775432110 01458889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccccC-CCHHHHHHHHHcccCCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVE-HIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~~~-~~~e~~dLI~~~L~~DP~~R 785 (934)
|+|||++.+..++.++|||||||++|+|++| .+||....... ..+........... .++++.+++.+||..||++|
T Consensus 164 y~~PE~~~~~~~~~~sDv~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~R 242 (274)
T cd06609 164 WMAPEVIKQSGYDEKADIWSLGITAIELAKG-EPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKER 242 (274)
T ss_pred ccChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhC
Confidence 9999999998899999999999999999996 77775432221 12222222222222 56789999999999999999
Q ss_pred cCHHHHHcCCCCCCccc
Q 002343 786 PKAQNVLNHPFFWTADT 802 (934)
Q Consensus 786 PTa~evL~HPff~~~~~ 802 (934)
||++++++||||.....
T Consensus 243 pt~~~il~~~~~~~~~~ 259 (274)
T cd06609 243 PSAKELLKHKFIKKAKK 259 (274)
T ss_pred cCHHHHhhChhhcCCCc
Confidence 99999999999976544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=324.02 Aligned_cols=243 Identities=21% Similarity=0.345 Sum_probs=183.9
Q ss_pred EEEeee--ecccCcEEEEEEE-EecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 475 VVFNKE--IAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 475 ~~~~~~--IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
|.+.+. ||+|+||+||++. ..+++.+|+|.+..........++..+ ..+||||+++++++...+..|+|||||+
T Consensus 16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~--~~~h~~iv~~~~~~~~~~~~~iv~e~~~- 92 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQL--MKDNPNFIKLYYSVTTLKGHVLIMDYIK- 92 (267)
T ss_pred hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHH--hhcCCCEEEEEEEEecCCeeEEEEEcCC-
Confidence 344444 5999999999985 456889999998754332221222212 2379999999999999999999999554
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++.. ...+++.+++.++.||+.||+|||+.||+|||
T Consensus 93 ---------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 134 (267)
T PHA03390 93 ---------DGDLFDLLKK-----------------------------EGKLSEAEVKKIIRQLVEALNDLHKHNIIHND 134 (267)
T ss_pred ---------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence 4555554432 22567889999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||+++.++. .++|+|||+++....... ..|+..|+|
T Consensus 135 l~p~nil~~~~~~-~~~l~dfg~~~~~~~~~~---------------------------------------~~~~~~y~a 174 (267)
T PHA03390 135 IKLENVLYDRAKD-RIYLCDYGLCKIIGTPSC---------------------------------------YDGTLDYFS 174 (267)
T ss_pred CCHHHEEEeCCCC-eEEEecCccceecCCCcc---------------------------------------CCCCCcccC
Confidence 9999999977652 599999999876532110 347899999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHH---hhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIV---KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~---~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
||++.+..++.++|||||||++|+|++| ..||........ ... ...........++.+.+||.+||+.||.+||
T Consensus 175 PE~~~~~~~~~~~DvwslG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 253 (267)
T PHA03390 175 PEKIKGHNYDVSFDWWAVGVLTYELLTG-KHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRL 253 (267)
T ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHC-CCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCC
Confidence 9999998999999999999999999996 677754332211 111 1111222334678999999999999999999
Q ss_pred C-HHHHHcCCCCCC
Q 002343 787 K-AQNVLNHPFFWT 799 (934)
Q Consensus 787 T-a~evL~HPff~~ 799 (934)
+ ++++|+||||.+
T Consensus 254 ~~~~~~l~h~~~~~ 267 (267)
T PHA03390 254 TNYNEIIKHPFLKI 267 (267)
T ss_pred chHHHHhcCCcccC
Confidence 6 599999999953
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=329.61 Aligned_cols=282 Identities=23% Similarity=0.301 Sum_probs=197.5
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCChh------HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD------VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~------~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|...+.||+|+||+||++... +++.||+|.+...... ....|++ ++..++||||+++++.+.+.+..|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQE-ILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHH-HHHhCCCCCchhheeeeecCCEEEEEE
Confidence 5778899999999999998554 5899999999764322 2344544 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|.+ ++|.+++... ....+++..++.++.||+.||+|||+.|
T Consensus 81 e~~~~----------~~L~~~~~~~---------------------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 123 (316)
T cd05574 81 DYCPG----------GELFRLLQRQ---------------------------PGKCLSEEVARFYAAEVLLALEYLHLLG 123 (316)
T ss_pred EecCC----------CCHHHHHHhC---------------------------CCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 96653 3343333211 0234677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+||+++.++. ++|+|||++................ .......... .................||
T Consensus 124 i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~ 195 (316)
T cd05574 124 IVYRDLKPENILLHESGH--IMLSDFDLSKQSDVEPPPVSKALRK-GSRRSSVNSI-----PSETFSEEPSFRSNSFVGT 195 (316)
T ss_pred eeccCCChHHeEEcCCCC--EEEeecchhhccccccccccccccc-cccccccccc-----chhhhcccccCCCCCCcCc
Confidence 999999999999976654 8999999998764432211100000 0000000000 0000001111111224689
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhccccccc--CCCHHHHHHHHHcccCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLV--EHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~--~~~~e~~dLI~~~L~~DP~ 783 (934)
..|+|||++.+..++.++|||||||++|+|++| ..||..... .....+.......+. ..++++.++|.+||+.||+
T Consensus 196 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 274 (316)
T cd05574 196 EEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG-TTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPS 274 (316)
T ss_pred cCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC-CCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHh
Confidence 999999999998899999999999999999996 667754322 222212221111222 2468999999999999999
Q ss_pred CCcC----HHHHHcCCCCCCccc
Q 002343 784 LRPK----AQNVLNHPFFWTADT 802 (934)
Q Consensus 784 ~RPT----a~evL~HPff~~~~~ 802 (934)
+||| ++++++||||.+.++
T Consensus 275 ~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 275 KRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HCCCchhhHHHHHcCchhhcCCh
Confidence 9999 999999999977554
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=322.48 Aligned_cols=246 Identities=26% Similarity=0.403 Sum_probs=187.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|.+.+.||+|+||.||++.. .+|+.||+|++..... +...+|+. +++.++||||+++++++.+....|+|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIR-MLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHH-HHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 577888999999999999855 4689999999864321 23455665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||++++.+.+ +. ....+++.+++.++.||+.||+|||++||
T Consensus 81 ~~~~~~l~~~----------~~-----------------------------~~~~~~~~~~~~~~~ql~~~l~~LH~~~i 121 (286)
T cd07847 81 YCDHTVLNEL----------EK-----------------------------NPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121 (286)
T ss_pred ccCccHHHHH----------Hh-----------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 7765433322 11 12346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||++..+....... ....|+.
T Consensus 122 ~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 164 (286)
T cd07847 122 IHRDVKPENILITKQG--QIKLCDFGFARILTGPGDDY-----------------------------------TDYVATR 164 (286)
T ss_pred eecCCChhhEEEcCCC--cEEECccccceecCCCcccc-----------------------------------cCccccc
Confidence 9999999999997665 49999999998765432110 0134788
Q ss_pred ccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcc----------------------cc-
Q 002343 708 GWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRK----------------------DL- 761 (934)
Q Consensus 708 ~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~----------------------~~- 761 (934)
.|+|||++.+ ..++.++|||||||++|+|++| .+||..... ....+..... ..
T Consensus 165 ~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T cd07847 165 WYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPE 243 (286)
T ss_pred ccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcc
Confidence 9999999876 4578999999999999999996 677754322 1111111000 00
Q ss_pred -------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 762 -------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 762 -------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.....+.++.+||.+||+.||++||++.|++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 244 TREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 011235678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=318.26 Aligned_cols=248 Identities=25% Similarity=0.443 Sum_probs=192.1
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|.+.+.||+|+||+||++. ..+|+.||+|++.... .....+|+. +++.++||||+++++++.+.++.|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVA-VLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHH-HHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 36778999999999999974 4568999999986432 123455655 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|. +++|.+++... ....+++.+++.++.|++.||+|||++++
T Consensus 80 ~~~----------~~~l~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (256)
T cd08218 80 YCE----------GGDLYKKINAQ---------------------------RGVLFPEDQILDWFVQICLALKHVHDRKI 122 (256)
T ss_pred cCC----------CCcHHHHHHhc---------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 665 33444433211 02245778889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+|+||+|+|||++.++ .++|+|||++.......... ....|++
T Consensus 123 ~h~~l~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~ 165 (256)
T cd08218 123 LHRDIKSQNIFLTKDG--TIKLGDFGIARVLNSTVELA-----------------------------------RTCIGTP 165 (256)
T ss_pred ecCCCCHHHEEEcCCC--CEEEeeccceeecCcchhhh-----------------------------------hhccCCc
Confidence 9999999999997655 49999999997654321110 0134888
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHH-HHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++.+..++.++|||||||++|+|++| ..||.... ... ..+........+...+.++.++|.+||+.+|++|
T Consensus 166 ~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08218 166 YYLSPEICENRPYNNKSDIWALGCVLYEMCTL-KHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDR 244 (256)
T ss_pred cccCHHHhCCCCCCCccchhHHHHHHHHHHcC-CCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999988899999999999999999997 56664432 222 2233333333344567899999999999999999
Q ss_pred cCHHHHHcCCCC
Q 002343 786 PKAQNVLNHPFF 797 (934)
Q Consensus 786 PTa~evL~HPff 797 (934)
|++.++++||||
T Consensus 245 p~~~~vl~~~~~ 256 (256)
T cd08218 245 PSVNSILEKNFI 256 (256)
T ss_pred cCHHHHhhCcCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=328.47 Aligned_cols=251 Identities=25% Similarity=0.397 Sum_probs=193.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..++|.+.+.||+|+||+||++.. .+++.||+|.+..... +...+|+. +++.++||||+++++++..++..|+||
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEIL-VMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 346788899999999999999854 5789999999865432 23344554 778899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||+ ++|+|.+++. ...+++.++..++.|++.||.|||+.|
T Consensus 96 e~~----------~~~~L~~~~~------------------------------~~~~~~~~~~~~~~~l~~~L~~LH~~~ 135 (297)
T cd06656 96 EYL----------AGGSLTDVVT------------------------------ETCMDEGQIAAVCRECLQALDFLHSNQ 135 (297)
T ss_pred ccc----------CCCCHHHHHH------------------------------hCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 954 4555555432 233567788999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .++|+|||++.......... ....|+
T Consensus 136 i~H~dL~p~Nili~~~~--~~~l~Dfg~~~~~~~~~~~~-----------------------------------~~~~~~ 178 (297)
T cd06656 136 VIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR-----------------------------------STMVGT 178 (297)
T ss_pred cccCCCCHHHEEECCCC--CEEECcCccceEccCCccCc-----------------------------------CcccCC
Confidence 99999999999997665 48999999998654432111 013588
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhcc-c-ccccCCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRK-D-LFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~-~-~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+.|+|||.+.+..++.++|||||||++|++++| .+||..... .... +..... . ..+...++.+++||.+||..||
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 257 (297)
T cd06656 179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDV 257 (297)
T ss_pred ccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCCh
Confidence 999999999998899999999999999999996 666644322 1111 111111 1 1223345788999999999999
Q ss_pred CCCcCHHHHHcCCCCCCc
Q 002343 783 DLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~ 800 (934)
++||++.++++||||...
T Consensus 258 ~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 258 DRRGSAKELLQHPFLKLA 275 (297)
T ss_pred hhCcCHHHHhcCchhccc
Confidence 999999999999999644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=324.16 Aligned_cols=265 Identities=21% Similarity=0.304 Sum_probs=194.6
Q ss_pred cceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
.++|.+.+.||+|+||.||++... .+..||+|.+..... ....+|+ .+++.++||||+++++++.+.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEcCCCC
Confidence 467888999999999999997432 255899998864432 1223444 47788899999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||. +|+|.+++........ ........+...+..++.||+.||.|
T Consensus 84 ~~lv~e~~~----------~g~L~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~l~~~l~~ 134 (288)
T cd05061 84 TLVVMELMA----------HGDLKSYLRSLRPEAE-------------------NNPGRPPPTLQEMIQMAAEIADGMAY 134 (288)
T ss_pred cEEEEeCCC----------CCCHHHHHHHhccccc-------------------cCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999554 4555555433211000 00001234567788999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|+||||||+|||++.++ .+||+|||+++.+......... .
T Consensus 135 lH~~~i~H~dikp~nili~~~~--~~~L~Dfg~~~~~~~~~~~~~~---------------------------------~ 179 (288)
T cd05061 135 LNAKKFVHRDLAARNCMVAHDF--TVKIGDFGMTRDIYETDYYRKG---------------------------------G 179 (288)
T ss_pred HHhCCCcCCCCChheEEEcCCC--cEEECcCCcccccccccccccc---------------------------------C
Confidence 9999999999999999997655 4899999999865432211100 0
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
...++..|+|||.+.++.++.++|||||||++|||++++.+||....... ...+ .......+...++++.+++.+||+
T Consensus 180 ~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 259 (288)
T cd05061 180 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 259 (288)
T ss_pred CCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 13457789999999988999999999999999999997788886543322 2222 222222233446889999999999
Q ss_pred CCCCCCcCHHHHHc------CCCCCCcc
Q 002343 780 PNPDLRPKAQNVLN------HPFFWTAD 801 (934)
Q Consensus 780 ~DP~~RPTa~evL~------HPff~~~~ 801 (934)
.||++|||+.++++ ||||.+.+
T Consensus 260 ~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 260 FNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred CChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 99999999999986 99997654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=323.37 Aligned_cols=249 Identities=28% Similarity=0.410 Sum_probs=187.4
Q ss_pred eecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----h-HHHHHH--HHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 480 EIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----D-VALKEI--QNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~-~~~~Ei--~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
.||+|+||+||++.. .+++.||+|.+.+... + ....|. ..++....||||+++++++.+.+..|+|||||.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999854 5689999999865421 1 122222 234555789999999999999999999999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.. ...+++.+++.++.|++.||+|||+.+|+||
T Consensus 81 ----------g~~L~~~l~~-----------------------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 121 (278)
T cd05606 81 ----------GGDLHYHLSQ-----------------------------HGVFSEAEMRFYAAEIILGLEHMHNRFVVYR 121 (278)
T ss_pred ----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcC
Confidence 4444443321 2346888999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++.+..... ....|+..|+
T Consensus 122 di~p~nili~~~~--~~kl~dfg~~~~~~~~~~-------------------------------------~~~~~~~~y~ 162 (278)
T cd05606 122 DLKPANILLDEHG--HVRISDLGLACDFSKKKP-------------------------------------HASVGTHGYM 162 (278)
T ss_pred CCCHHHEEECCCC--CEEEccCcCccccCccCC-------------------------------------cCcCCCcCCc
Confidence 9999999997665 499999999875532111 0135899999
Q ss_pred cchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh----HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 711 APEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE----RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 711 APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~----~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
|||++.++ .++.++||||+||++|+|++| ..||..... .............+...++++.++|.+||..||.+|
T Consensus 163 aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R 241 (278)
T cd05606 163 APEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 241 (278)
T ss_pred CcHHhcCCCCCCcccchHhHHHHHHHHHhC-CCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhc
Confidence 99999754 589999999999999999996 667754311 111112212222333457899999999999999999
Q ss_pred c-----CHHHHHcCCCCCCccchhhhh
Q 002343 786 P-----KAQNVLNHPFFWTADTRLSFL 807 (934)
Q Consensus 786 P-----Ta~evL~HPff~~~~~~~~fl 807 (934)
| ++.++++||||...++...+.
T Consensus 242 ~~~~~~~~~~ll~~~~~~~~~~~~~~~ 268 (278)
T cd05606 242 LGCLGRGAQEVKEHPFFRSLDWQMVFL 268 (278)
T ss_pred cCCCCCCHHHHHhCccccCCCchHhhh
Confidence 9 999999999998776554443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=324.30 Aligned_cols=251 Identities=26% Similarity=0.362 Sum_probs=191.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||.|+||+||++.. .+++.||+|++..... +...+|+. +++.++||||+++++.+.+++..|+||||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEID-ILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHH-HHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 3467778899999999999854 4689999999865433 23445654 77888999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|+ +|+|.+++... ...+++.+++.++.|++.||+|||++||+
T Consensus 84 ~~----------~~~L~~~~~~~----------------------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 125 (280)
T cd06611 84 CD----------GGALDSIMLEL----------------------------ERGLTEPQIRYVCRQMLEALNFLHSHKVI 125 (280)
T ss_pred cC----------CCcHHHHHHHh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 55 44444443221 23467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .++|+|||++.......... ....||+.
T Consensus 126 h~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~ 168 (280)
T cd06611 126 HRDLKAGNILLTLDG--DVKLADFGVSAKNKSTLQKR-----------------------------------DTFIGTPY 168 (280)
T ss_pred cCCCChhhEEECCCC--CEEEccCccchhhccccccc-----------------------------------ceeecchh
Confidence 999999999997665 49999999987654321110 01358999
Q ss_pred cccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccc--cccCCCHHHHHHHHHccc
Q 002343 709 WQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDL--FLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 709 Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~--~~~~~~~e~~dLI~~~L~ 779 (934)
|+|||++.. ..++.++|||||||++|||++| .+||..... +.. .+....... .+...+.++.+||.+||+
T Consensus 169 y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 247 (280)
T cd06611 169 WMAPEVVACETFKDNPYDYKADIWSLGITLIELAQM-EPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLV 247 (280)
T ss_pred hcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhC-CCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhc
Confidence 999999853 3467899999999999999996 677755422 222 222221111 123456799999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCCc
Q 002343 780 PNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~~ 800 (934)
.||.+||++.++++||||.+.
T Consensus 248 ~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 248 KDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred cChhhCcCHHHHhcChhhccc
Confidence 999999999999999999765
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=323.66 Aligned_cols=250 Identities=27% Similarity=0.412 Sum_probs=185.5
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEec------CCeE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESD------QDFV 542 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------~~~~ 542 (934)
.+.|.+.+.||+|+||+||++.. .+++.||+|++..... .....|+..+....+||||+++++++.. .++.
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 35677788999999999999854 5688999999865432 2344555534444489999999999853 5689
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|++||||.+ +|.+++. .. +...+++..++.++.||+.||+|
T Consensus 95 ~iv~e~~~~~~L~~~~~-----------~~---------------------------~~~~~~~~~~~~~~~qi~~al~~ 136 (282)
T cd06636 95 WLVMEFCGAGSVTDLVK-----------NT---------------------------KGNALKEDWIAYICREILRGLAH 136 (282)
T ss_pred EEEEEeCCCCcHHHHHH-----------Hc---------------------------cCCCCCHHHHHHHHHHHHHHHHH
Confidence 999997764 4544442 10 12335677888999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+||+++.++. ++|+|||++.......... .
T Consensus 137 LH~~~ivH~dl~~~nili~~~~~--~~l~dfg~~~~~~~~~~~~-----------------------------------~ 179 (282)
T cd06636 137 LHAHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTVGRR-----------------------------------N 179 (282)
T ss_pred HHHCCcccCCCCHHHEEECCCCC--EEEeeCcchhhhhccccCC-----------------------------------C
Confidence 99999999999999999976654 8999999987654221100 0
Q ss_pred cCCCCCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhccc--ccccCCCHHHHHH
Q 002343 702 VGYGSSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKD--LFLVEHIPEAVDL 773 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~--~~~~~~~~e~~dL 773 (934)
...|++.|+|||++. +..++.++|||||||++|||++| .+||..... ........... ......++++.+|
T Consensus 180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (282)
T cd06636 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG-APPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDF 258 (282)
T ss_pred cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC-CCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHH
Confidence 145899999999986 34678899999999999999996 666654322 21111111111 1122356799999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff 797 (934)
|.+||+.||.+|||+.|+++||||
T Consensus 259 i~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 259 IEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HHHHhCCChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=320.28 Aligned_cols=248 Identities=30% Similarity=0.379 Sum_probs=184.8
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--------DVALKEIQNLIASDQHPNIVRWYGVESD--QDFVY 543 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~y 543 (934)
|...+.||+|+||.||++.. .+++.||+|++..... ....+|+. +++.++||||+++++++.+ ....|
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQ-LLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHH-HHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 56678999999999999854 5689999998864321 12344554 7888899999999998875 46789
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
++||++. +++|.+++.. ...+++..++.++.|++.||+|||
T Consensus 83 l~~e~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 83 IFMEYMP----------GGSVKDQLKA-----------------------------YGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred EEEeCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999654 3444444321 123567788899999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+.+|+||||||+||+++.++ .+||+|||+++.+......... ....
T Consensus 124 ~~~i~H~~l~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~--------------------------------~~~~ 169 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQTICMSGTG--------------------------------IRSV 169 (266)
T ss_pred hCCeeeCCCCHHHEEECCCC--CEEEccCCCccccccccccCCc--------------------------------cccC
Confidence 99999999999999996554 4999999999876432111000 0113
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhc-ccccccCCCHHHHHHHHHcccC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDR-KDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
.|+..|+|||++.+..++.++|||||||++|||++| .+||....... ....... ....+....+.+.+|| +||..
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~ 247 (266)
T cd06651 170 TGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTE-KPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFV 247 (266)
T ss_pred CccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHC-CCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcC
Confidence 488999999999988899999999999999999996 77876543221 1111111 1222233457788898 67778
Q ss_pred CCCCCcCHHHHHcCCCCC
Q 002343 781 NPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~ 798 (934)
+|++||+++|+++||||.
T Consensus 248 ~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 248 EARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ChhhCcCHHHHhcCcccc
Confidence 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=322.73 Aligned_cols=246 Identities=28% Similarity=0.468 Sum_probs=188.4
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|+||.||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+++..|+|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIK-ALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHH-HHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 67788999999999999855 4689999999875432 34455655 77888999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+.++|.+++ ... ...+++.+++.++.||+.||+|||++||+
T Consensus 81 ~~~~L~~~~-----------~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 121 (286)
T cd07832 81 MPSDLSEVL-----------RDE----------------------------ERPLPEAQVKSYMRMLLKGVAYMHANGIM 121 (286)
T ss_pred cCCCHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 655555444 210 23467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++ .++|+|||++.......... .....|+..
T Consensus 122 H~dl~p~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~ 165 (286)
T cd07832 122 HRDLKPANLLISADG--VLKIADFGLARLFSEEEPRL----------------------------------YSHQVATRW 165 (286)
T ss_pred cCCcCHHHEEEcCCC--cEEEeeeeecccccCCCCCc----------------------------------cccccCccc
Confidence 999999999997655 48999999998765432100 011458999
Q ss_pred cccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcc-------------------------c
Q 002343 709 WQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRK-------------------------D 760 (934)
Q Consensus 709 Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~-------------------------~ 760 (934)
|+|||++.+.. ++.++|||||||++|||++| .+||...... . ..+..... .
T Consensus 166 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07832 166 YRAPELLYGARKYDPGVDLWAVGCIFAELLNG-SPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKP 244 (286)
T ss_pred ccCceeeeccccCCchhHHHHHHHHHHHHHcC-CcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCc
Confidence 99999987544 58999999999999999997 7777543221 1 11111000 0
Q ss_pred ----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
....+...++.+||.+||+.||++|||++++++||||
T Consensus 245 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred chHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0012335788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=318.69 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=189.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++....+..||||.+..... +...+|++ ++..++||||+++++++.+.+..|++||||.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHH-HHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 34677889999999999998666666799998875432 34456665 7788999999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++... ...+++.+++.++.||+.||+|||++||+||
T Consensus 83 ----------~~~l~~~i~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05113 83 ----------NGCLLNYLREH----------------------------GKRFQPSQLLEMCKDVCEGMAYLESKQFIHR 124 (256)
T ss_pred ----------CCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 33444433211 1235778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ ++||+|||+++.......... . ...++..|+
T Consensus 125 dl~p~nili~~~~--~~kl~d~g~~~~~~~~~~~~~---~-------------------------------~~~~~~~y~ 168 (256)
T cd05113 125 DLAARNCLVDDQG--CVKVSDFGLSRYVLDDEYTSS---V-------------------------------GSKFPVRWS 168 (256)
T ss_pred ccCcceEEEcCCC--CEEECCCccceecCCCceeec---C-------------------------------CCccChhhC
Confidence 9999999997655 599999999986543221100 0 023567899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|+|++.+..||...... . ..+............++++.+++.+||+.||.+||++
T Consensus 169 ~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 248 (256)
T cd05113 169 PPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTF 248 (256)
T ss_pred CHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 9999998889999999999999999999567888654332 2 2222222222233456899999999999999999999
Q ss_pred HHHHcC
Q 002343 789 QNVLNH 794 (934)
Q Consensus 789 ~evL~H 794 (934)
.+++++
T Consensus 249 ~~ll~~ 254 (256)
T cd05113 249 QQLLSS 254 (256)
T ss_pred HHHHHh
Confidence 999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=339.17 Aligned_cols=285 Identities=22% Similarity=0.307 Sum_probs=189.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~ 541 (934)
+.|.+.+.||+|+||.||++.. .++..||||++..... +...+|+. +++.+ +|||||++++++.+.+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELK-ILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHH-HHHhhccCCceeeEeeEecCCCC
Confidence 4688899999999999998743 2345899999975432 23456766 56666 89999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhc-------cch-hHHHHH---------------Hhhc-------cccc
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQ-------DSN-LLNEVR---------------IRLL-------PVME 590 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~-------~~~-~~~~~~---------------~~~~-------~~~~ 590 (934)
+|+|||||.+ +|.+++......+......... ..+ ...... .... ....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999997653 4555443211110000000000 000 000000 0000 0000
Q ss_pred chhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCC
Q 002343 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670 (934)
Q Consensus 591 ~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~ 670 (934)
...........++++.++++++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~~~~~~~~--- 271 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMNDSNYVVK--- 271 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccCCcceeec---
Confidence 00000111124578899999999999999999999999999999999997654 5999999999866433211000
Q ss_pred CcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH
Q 002343 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER 750 (934)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~ 750 (934)
....++..|||||++.+..++.++|||||||++|||++.|.+||......
T Consensus 272 ------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~ 321 (374)
T cd05106 272 ------------------------------GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN 321 (374)
T ss_pred ------------------------------cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence 01235678999999999999999999999999999998557888654321
Q ss_pred --HHHHHhhcc-cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 751 --DANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 751 --~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
......... ...+...++++.++|.+||+.||++|||+.++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 322 SKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 122222221 2222334689999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=315.38 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=192.0
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|...+.||+|+||.||++. ..+++.||||++..... ....+|+. +++.++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQ-VLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHH-HHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 36778899999999999974 45788999999865431 23344544 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+++ +++|.+++.... ...+++..++.++.|++.||+|||++||
T Consensus 80 ~~~----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i 122 (256)
T cd08220 80 YAP----------GGTLAEYIQKRC---------------------------NSLLDEDTILHFFVQILLALHHVHTKLI 122 (256)
T ss_pred cCC----------CCCHHHHHHHhc---------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 554 455555543210 2336778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++. .+||+|||+++.+....... ...|+.
T Consensus 123 ~h~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~------------------------------------~~~~~~ 165 (256)
T cd08220 123 LHRDLKTQNILLDKHKM-VVKIGDFGISKILSSKSKAY------------------------------------TVVGTP 165 (256)
T ss_pred ecCCCCHHHEEEcCCCC-EEEEccCCCceecCCCcccc------------------------------------ccccCC
Confidence 99999999999975543 58999999998764432110 135889
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||.+.+..++.++|||||||++|+|++| ..||.... .... .+............++++.++|.+||..||++|
T Consensus 166 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 244 (256)
T cd08220 166 CYISPELCEGKPYNQKSDIWALGCVLYELASL-KRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKR 244 (256)
T ss_pred cccCchhccCCCCCcccchHHHHHHHHHHHhC-CCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhC
Confidence 99999999988889999999999999999997 55665432 2222 222222222333457899999999999999999
Q ss_pred cCHHHHHcCCCC
Q 002343 786 PKAQNVLNHPFF 797 (934)
Q Consensus 786 PTa~evL~HPff 797 (934)
||+.++++||||
T Consensus 245 pt~~~ll~~p~~ 256 (256)
T cd08220 245 PQLSQIMAQPIC 256 (256)
T ss_pred CCHHHHhhCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=317.66 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=189.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.++||+|+||+||++...+++.||+|.+..... +...+|+ .+++.++||||+++++++.+.+..|++||+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~- 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEA-NLMKTLQHDKLVRLYAVVTKEEPIYIITEYM- 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHH-HHHHhCCCCCeeeEEEEEcCCCCcEEEEecC-
Confidence 46888899999999999998777788999999865432 2334454 4788899999999999999999999999955
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
.+|+|.+++.... ...+++..++.++.|++.||+|||+.+++||
T Consensus 84 ---------~~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~ 127 (261)
T cd05072 84 ---------AKGSLLDFLKSDE---------------------------GGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 127 (261)
T ss_pred ---------CCCcHHHHHHHhc---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 4455555443210 1235677888999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++.......... ....++..|+
T Consensus 128 dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~y~ 171 (261)
T cd05072 128 DLRAANVLVSESL--MCKIADFGLARVIEDNEYTAR----------------------------------EGAKFPIKWT 171 (261)
T ss_pred ccchhhEEecCCC--cEEECCCccceecCCCceecc----------------------------------CCCccceecC
Confidence 9999999997655 589999999987643221100 0123567899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|+|++++.+||...... ....+... ........+.++.+++.+||..+|++||++
T Consensus 172 aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 251 (261)
T cd05072 172 APEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTF 251 (261)
T ss_pred CHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence 9999998889999999999999999999668888654332 22222222 112223456789999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
+++.+
T Consensus 252 ~~i~~ 256 (261)
T cd05072 252 DYLQS 256 (261)
T ss_pred HHHHH
Confidence 99864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=321.77 Aligned_cols=244 Identities=29% Similarity=0.417 Sum_probs=183.8
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yLVmE 547 (934)
|.+.+.||+|+||.||++. ..+++.||+|++.+... ...++|+..+.+..+||||+++++++.+. +..|+|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 4567889999999999985 45689999999865322 23356766444444699999999999987 89999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
++.++|.+.+.. ....+++.+++.++.||+.||+|||+.||
T Consensus 81 ~~~~~l~~~l~~---------------------------------------~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 81 LMDMNLYELIKG---------------------------------------RKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred cCCccHHHHHHh---------------------------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 887665554311 01346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++. ..+||+|||+++.+...... +...|+.
T Consensus 122 ~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~------------------------------------~~~~~~~ 162 (282)
T cd07831 122 FHRDIKPENILIKD---DILKLADFGSCRGIYSKPPY------------------------------------TEYISTR 162 (282)
T ss_pred eecccCHHHEEEcC---CCeEEEecccccccccCCCc------------------------------------CCCCCCc
Confidence 99999999999976 35999999999876432211 0134788
Q ss_pred ccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh-----------------cccc------
Q 002343 708 GWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD-----------------RKDL------ 761 (934)
Q Consensus 708 ~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~-----------------~~~~------ 761 (934)
.|+|||++.. ..++.++|||||||++|||++| .+||....... ..+... ....
T Consensus 163 ~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (282)
T cd07831 163 WYRAPECLLTDGYYGPKMDIWAVGCVFFEILSL-FPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG 241 (282)
T ss_pred ccCChhHhhcCCCCCcchhHHHHHHHHHHHHcC-CcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccccc
Confidence 9999998754 4568999999999999999995 77775432111 111000 0000
Q ss_pred -----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 762 -----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 762 -----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.....+.++.+||.+||+.||++||+++++++||||
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 242 TGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 011345789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=322.61 Aligned_cols=259 Identities=19% Similarity=0.272 Sum_probs=191.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
.+++|.+.+.||+|+||+||++.. ..++.||||.+..... ....+|+. +++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~-~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS-VMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCeeeEEEEEcCCC
Confidence 456788899999999999998743 2356899999864322 23445655 778899999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..++|||||. +|+|.+++........ .......+++..+..++.|++.||+
T Consensus 83 ~~~lv~e~~~----------~~~L~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~l~~~l~ 133 (277)
T cd05062 83 PTLVIMELMT----------RGDLKSYLRSLRPEME-------------------NNPVQAPPSLKKMIQMAGEIADGMA 133 (277)
T ss_pred CeEEEEecCC----------CCCHHHHHHHcCcccc-------------------ccccccCCCHHHHHHHHHHHHHHHH
Confidence 9999999654 4455554432110000 0000123466788999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+.+++||||||+|||++.++ .+||+|||+++.+.........
T Consensus 134 ~lH~~~~vH~dlkp~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~--------------------------------- 178 (277)
T cd05062 134 YLNANKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKG--------------------------------- 178 (277)
T ss_pred HHHHCCcccCCcchheEEEcCCC--CEEECCCCCccccCCcceeecC---------------------------------
Confidence 99999999999999999997655 4899999999865433211100
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
....++..|+|||++.+..++.++|||||||++|||++++.+||....... .. +........+...++++.++|.+||
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (277)
T cd05062 179 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCW 258 (277)
T ss_pred CCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 013467889999999988999999999999999999997788886543322 22 2222222233445678999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++|||+.|++++
T Consensus 259 ~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 259 QYNPKMRPSFLEIISS 274 (277)
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=321.39 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=186.0
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh--hHHHHHHHHHHHhC-CCCceeEEEEEEe-----cCCe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH--DVALKEIQNLIASD-QHPNIVRWYGVES-----DQDF 541 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l-~HpNIV~l~g~~~-----~~~~ 541 (934)
..+.|.+.+.||+|+||+||++. ..+++.||+|.+..... .....|+. ++..+ +||||+++++++. +++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYN-ILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHH-HHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 45678888999999999999974 45688999998865332 33445655 55555 7999999999874 4567
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||+ +|+|.+++..... ....+++..+..++.|++.||.|
T Consensus 95 ~~lv~e~~~----------~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~i~~~l~~ 139 (286)
T cd06638 95 LWLVLELCN----------GGSVTDLVKGFLK-------------------------RGERMEEPIIAYILHEALMGLQH 139 (286)
T ss_pred EEEEEeecC----------CCCHHHHHHHhhc-------------------------cCccccHHHHHHHHHHHHHHHHH
Confidence 999999654 4444444321100 12346778899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|+||||||+||+++.++. +||+|||+++.+....... .
T Consensus 140 lH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~~~~~~~~~-----------------------------------~ 182 (286)
T cd06638 140 LHVNKTIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTSTRLRR-----------------------------------N 182 (286)
T ss_pred HHhCCccccCCCHHhEEECCCCC--EEEccCCceeecccCCCcc-----------------------------------c
Confidence 99999999999999999977654 8999999998764321110 0
Q ss_pred cCCCCCccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhccc-c-cccCCCHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKD-L-FLVEHIPEAVD 772 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~-~-~~~~~~~e~~d 772 (934)
...|++.|+|||++.. ..++.++|||||||++|||++| .+||..... ... ........ . .+...+.++.+
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (286)
T cd06638 183 TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG-DPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFND 261 (286)
T ss_pred cccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcC-CCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHH
Confidence 1358999999999853 4478899999999999999996 566654322 211 11111111 1 11223568999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff 797 (934)
||.+||+.||++|||+.|+++||||
T Consensus 262 li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 262 FIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHHccCCcccCCCHHHHhhcccC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=322.96 Aligned_cols=262 Identities=23% Similarity=0.327 Sum_probs=190.2
Q ss_pred eEEEeeeecccCcEEEEEEEEec------CcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~------g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.|.+.+.||+|+||.||++.... ...||+|.+...... ...+|+. ++..++||||+++++++.+.+..|
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~-~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAE-LMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHH-HHHhcCCcccceEEEEEcCCCceE
Confidence 46678899999999999985433 267999998654332 2345555 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
++||||. +|+|.+++.......... . ..........+++.+++.++.||+.||+|||
T Consensus 85 ~~~e~~~----------~~~L~~~l~~~~~~~~~~----------~---~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH 141 (283)
T cd05048 85 MLFEYLA----------HGDLHEFLVRNSPHSDVG----------A---ESGDETVKSSLDCSDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred EEEecCC----------CCcHHHHHHhcCCCcccc----------c---ccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999654 444444443221100000 0 0000001245788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++........... +..
T Consensus 142 ~~~i~H~dlkp~Nil~~~~~--~~~L~dfg~~~~~~~~~~~~~~---------------------------------~~~ 186 (283)
T cd05048 142 SHHFVHRDLAARNCLVGEGL--TVKISDFGLSRDIYSADYYRVQ---------------------------------SKS 186 (283)
T ss_pred hCCeeccccccceEEEcCCC--cEEECCCcceeecccccccccc---------------------------------CCC
Confidence 99999999999999997665 4999999999865432211100 113
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.+++.|+|||.+.+..++.++|||||||++|||++.+..||. ....+....+... ....+...++++.+|+.+||+.|
T Consensus 187 ~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 187 LLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred cccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCC
Confidence 478899999999988999999999999999999984455654 3434433333322 22334456789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++||++.+|++|
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=322.95 Aligned_cols=252 Identities=27% Similarity=0.395 Sum_probs=186.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCe-----
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASD-QHPNIVRWYGVESDQDF----- 541 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~----- 541 (934)
.|.+.+.||+|+||+||++.. .+|+.||||.+..... ....+|+. +++.+ +||||+++++++...+.
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREIS-LLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHH-HHHHccCCCCccceeeeEeecCCCCCce
Confidence 477788999999999999854 4689999998764321 34566776 55555 67999999999887665
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||.++|.+++....+. ....+++..++.++.||+.||+|
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRG-----------------------------------PGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred EEEEeeccCcCHHHHHHHhccc-----------------------------------CCCCCCHHHHHHHHHHHHHHHHH
Confidence 8999998887766665321000 02346788999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+||+++.++ ..+||+|||+++.+....... +
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~-~~~kl~dfg~~~~~~~~~~~~-----------------------------------~ 169 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQK-GLLKIADLGLGRAFSIPVKSY-----------------------------------T 169 (295)
T ss_pred HHHCCeeecCCChHHEEEecCC-CeEEEeecccceecCCCcccc-----------------------------------C
Confidence 9999999999999999997622 359999999998653321110 0
Q ss_pred cCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhc--------------------
Q 002343 702 VGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDR-------------------- 758 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~-------------------- 758 (934)
...+++.|+|||++.+ ..++.++|||||||++|+|++| .+||.... .....+....
T Consensus 170 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T cd07837 170 HEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK-QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEF 248 (295)
T ss_pred CcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhc
Confidence 1347889999999865 4579999999999999999997 56664321 1111111100
Q ss_pred ---c----cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 759 ---K----DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 759 ---~----~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
. ....+..++++.+||.+||+.||.+||++.+++.||||.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 0 000123567899999999999999999999999999983
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=363.18 Aligned_cols=255 Identities=27% Similarity=0.426 Sum_probs=210.7
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeec-----CChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~-----~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
...|.+.++||+|+||.|.+.. ..+++.+|+|++.+ ......++|+..+|...+.+=||+++-.|+|++++|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 3457788999999999999874 46689999999976 33456789999999999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|| |+++|+|-..|.. ...+|+..++.++..|+.||.-||+.
T Consensus 154 Md----------Y~pGGDlltLlSk-----------------------------~~~~pE~~ArFY~aEiVlAldslH~m 194 (1317)
T KOG0612|consen 154 MD----------YMPGGDLLTLLSK-----------------------------FDRLPEDWARFYTAEIVLALDSLHSM 194 (1317)
T ss_pred Ee----------cccCchHHHHHhh-----------------------------cCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 99 7788887766542 23578999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|+|||||||+||||+..|+ +||+|||.|-.+..+....+ .+.+|
T Consensus 195 gyVHRDiKPDNvLld~~GH--ikLADFGsClkm~~dG~V~s----------------------------------~~aVG 238 (1317)
T KOG0612|consen 195 GYVHRDIKPDNVLLDKSGH--IKLADFGSCLKMDADGTVRS----------------------------------SVAVG 238 (1317)
T ss_pred cceeccCCcceeEecccCc--EeeccchhHHhcCCCCcEEe----------------------------------ccccC
Confidence 9999999999999977765 99999999988876543322 22579
Q ss_pred CCccccchhcc----c-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccc---cCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLL----Q-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFL---VEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~----~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~---~~~~~e~~dLI~~ 776 (934)
||.|++||++. + +.|++.||+||+||++|||+.|..|||.+.... .-.|+.....+.+ ...+++++|||.+
T Consensus 239 TPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ 318 (1317)
T KOG0612|consen 239 TPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEA 318 (1317)
T ss_pred CCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHH
Confidence 99999999996 2 578999999999999999999877777665433 3345544333322 3467899999999
Q ss_pred cccCCCCCCcC---HHHHHcCCCCCCccc
Q 002343 777 LLDPNPDLRPK---AQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~RPT---a~evL~HPff~~~~~ 802 (934)
++. +|+.|.. ++++.+||||.+.+|
T Consensus 319 ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 319 LLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred Hhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 987 6889988 999999999988776
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=317.57 Aligned_cols=249 Identities=29% Similarity=0.390 Sum_probs=185.1
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----h---hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----H---DVALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~ 542 (934)
.|.+.+.||+|+||+||.+.. .+|+.||||.+.... . +...+|++ +++.++||||+++++++.+ ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQ-LLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHH-HHHhcCCCCeeeEEeEeccCCCceE
Confidence 467789999999999999854 568999999885321 1 12344555 7788899999999998876 3578
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|++||++. +|+|.+++.. ...+++..++.++.|++.||+||
T Consensus 82 ~~v~e~~~----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~l 122 (265)
T cd06652 82 SIFMEHMP----------GGSIKDQLKS-----------------------------YGALTENVTRKYTRQILEGVSYL 122 (265)
T ss_pred EEEEEecC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999654 4444444321 12356677889999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++ .++|+|||+++.+......... ...
T Consensus 123 H~~~i~H~dl~p~nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~~--------------------------------~~~ 168 (265)
T cd06652 123 HSNMIVHRDIKGANILRDSVG--NVKLGDFGASKRLQTICLSGTG--------------------------------MKS 168 (265)
T ss_pred HhCCEecCCCCHHHEEecCCC--CEEECcCccccccccccccccc--------------------------------ccc
Confidence 999999999999999997665 4899999999865432111000 011
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhc-ccccccCCCHHHHHHHHHccc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDR-KDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~ 779 (934)
..|+..|+|||++.+..++.++|||||||++|+|++| .+||...... ........ ....+...+..+.++|.+|+.
T Consensus 169 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 247 (265)
T cd06652 169 VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTE-KPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV 247 (265)
T ss_pred CCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhC-CCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc
Confidence 3588999999999988899999999999999999996 6677543211 11111111 122233445688999999995
Q ss_pred CCCCCCcCHHHHHcCCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~ 798 (934)
+|++||+++++++|||+.
T Consensus 248 -~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 248 -EAKLRPSADELLRHTFVH 265 (265)
T ss_pred -ChhhCCCHHHHhcCcccC
Confidence 999999999999999983
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=315.43 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=188.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||.|+||+||++.. .+++.+|+|.+..... +...+|+. +++.++||||+++++++.+.+.+|++||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEIS-MLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHH-HHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 4578889999999999999855 4578999999875432 34455555 78889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+++ ++|.+++... ...+++.++..++.|++.||+|||+++|+
T Consensus 82 ~~~----------~~l~~~~~~~----------------------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 123 (262)
T cd06613 82 CGG----------GSLQDIYQVT----------------------------RGPLSELQIAYVCRETLKGLAYLHETGKI 123 (262)
T ss_pred CCC----------CcHHHHHHhh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 664 3333332210 13467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++. +||+|||++..+....... ....|+..
T Consensus 124 h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~ 166 (262)
T cd06613 124 HRDIKGANILLTEDGD--VKLADFGVSAQLTATIAKR-----------------------------------KSFIGTPY 166 (262)
T ss_pred ecCCChhhEEECCCCC--EEECccccchhhhhhhhcc-----------------------------------ccccCCcc
Confidence 9999999999976654 8999999997654321100 01358889
Q ss_pred cccchhcccC---CCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc--cc---ccccCCCHHHHHHHHHccc
Q 002343 709 WQAPEQLLQG---RQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR--KD---LFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 709 Y~APE~l~~~---~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~--~~---~~~~~~~~e~~dLI~~~L~ 779 (934)
|+|||.+.+. .++.++|||||||++|+|++| .+||.... .......... .. ......+.++.+||.+||.
T Consensus 167 y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 245 (262)
T cd06613 167 WMAPEVAAVERKGGYDGKCDIWALGITAIELAEL-QPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLT 245 (262)
T ss_pred ccCchhhcccccCCcCchhhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcC
Confidence 9999999876 789999999999999999996 66665432 2222211111 11 0112234688999999999
Q ss_pred CCCCCCcCHHHHHcCCC
Q 002343 780 PNPDLRPKAQNVLNHPF 796 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPf 796 (934)
.||..|||+++++.|||
T Consensus 246 ~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 246 KDPKKRPTATKLLQHPF 262 (262)
T ss_pred CChhhCCCHHHHhcCCC
Confidence 99999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=328.57 Aligned_cols=259 Identities=26% Similarity=0.348 Sum_probs=196.9
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|...+.||+|+||.||++. ..+++.||+|.+..... +...+|+. +++.++||||+++++++.+++..|+||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHH-HHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 35556789999999999984 45688999999864432 22345554 77889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|+ +|+|.+++. ...+++..++.++.||+.||.|||+++|+
T Consensus 84 ~~----------~~~L~~~~~------------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~iv 123 (277)
T cd06642 84 LG----------GGSALDLLK------------------------------PGPLEETYIATILREILKGLDYLHSERKI 123 (277)
T ss_pred cC----------CCcHHHHhh------------------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 65 344444332 23356778899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++. ++|+|||+++.+....... ....|+..
T Consensus 124 H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 166 (277)
T cd06642 124 HRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKR-----------------------------------NTFVGTPF 166 (277)
T ss_pred ccCCChheEEEeCCCC--EEEccccccccccCcchhh-----------------------------------hcccCccc
Confidence 9999999999976654 8999999998664321100 01357889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|||++| ..|+....... .. +............+.++.++|.+||+.+|++||
T Consensus 167 y~aPE~~~~~~~~~~~Dv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (277)
T cd06642 167 WMAPEVIKQSAYDFKADIWSLGITAIELAKG-EPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRP 245 (277)
T ss_pred ccCHHHhCcCCCchhhhHHHHHHHHHHHHhC-CCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence 9999999988899999999999999999996 66765432221 11 111222222233457899999999999999999
Q ss_pred CHHHHHcCCCCCCccchhhhhhhhc
Q 002343 787 KAQNVLNHPFFWTADTRLSFLRDVS 811 (934)
Q Consensus 787 Ta~evL~HPff~~~~~~~~fl~~~s 811 (934)
++.++++||||.....+..++.++.
T Consensus 246 ~~~~il~~~~~~~~~~~~~~~~~~~ 270 (277)
T cd06642 246 TAKELLKHKFITRYTKKTSFLTELI 270 (277)
T ss_pred CHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 9999999999977666666665543
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=314.87 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=191.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||.|+||+||++.. .++..||+|++..... +...+|+. +++.++|+||+++++.+..++..|+|||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQ-AMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHH-HHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 477889999999999999854 4688999999865432 33455555 77889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ ++|.+++.... ....+++..+..++.||+.||+|||++||+
T Consensus 81 ~~~----------~~l~~~~~~~~--------------------------~~~~~~~~~~~~~~~ql~~al~~lh~~~i~ 124 (267)
T cd06610 81 LSG----------GSLLDIMKSSY--------------------------PRGGLDEAIIATVLKEVLKGLEYLHSNGQI 124 (267)
T ss_pred cCC----------CcHHHHHHHhc--------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 653 34433332210 013467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .++|+|||++..+.......... .....|+..
T Consensus 125 h~~l~p~ni~~~~~~--~~~l~df~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~ 171 (267)
T cd06610 125 HRDIKAGNILLGEDG--SVKIADFGVSASLADGGDRTRKV-------------------------------RKTFVGTPC 171 (267)
T ss_pred cCCCCHHhEEEcCCC--CEEEcccchHHHhccCccccccc-------------------------------cccccCChh
Confidence 999999999997665 48999999998776543221000 011458999
Q ss_pred cccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccc-----cCCCHHHHHHHHHcccC
Q 002343 709 WQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFL-----VEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 709 Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~-----~~~~~e~~dLI~~~L~~ 780 (934)
|+|||++... .++.++|+|||||++|+|++| ..||...... ............. ...++++.+++.+||+.
T Consensus 172 y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 250 (267)
T cd06610 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATG-AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQK 250 (267)
T ss_pred hcChHHHccccCcCcccchHhHhHHHHHHHhC-CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCC
Confidence 9999999877 789999999999999999996 6777653321 1122222111111 13457899999999999
Q ss_pred CCCCCcCHHHHHcCCCC
Q 002343 781 NPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 781 DP~~RPTa~evL~HPff 797 (934)
||++||++.++++||||
T Consensus 251 ~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 251 DPSKRPTAEELLKHKFF 267 (267)
T ss_pred ChhhCcCHHHHhhCCCC
Confidence 99999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=323.90 Aligned_cols=259 Identities=24% Similarity=0.363 Sum_probs=190.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..|.+.+.||+|+||+||++.. .++..||+|.+..... ....+|+. +++.++||||+++++++...+..|
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE-LLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEecCCccE
Confidence 4578889999999999999753 2346799999865432 23455655 778889999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+||||+. +|+|.+++.......... . ...+...+++.+++.++.||+.||+|||
T Consensus 84 lv~e~~~----------~~~L~~~i~~~~~~~~~~-----------~-----~~~~~~~l~~~~~~~~~~ql~~aL~~lH 137 (288)
T cd05093 84 MVFEYMK----------HGDLNKFLRAHGPDAVLM-----------A-----EGNRPAELTQSQMLHIAQQIAAGMVYLA 137 (288)
T ss_pred EEEEcCC----------CCCHHHHHHHcCCccccc-----------c-----ccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 444444443211100000 0 0001235789999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++........... ...
T Consensus 138 ~~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~---------------------------------~~~ 182 (288)
T cd05093 138 SQHFVHRDLATRNCLVGENL--LVKIGDFGMSRDVYSTDYYRVG---------------------------------GHT 182 (288)
T ss_pred hCCeeecccCcceEEEccCC--cEEeccCCccccccCCceeecC---------------------------------CCC
Confidence 99999999999999997665 4899999999866433211100 013
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.++..|+|||++.+..++.++|||||||++|+|++++.+||....... ..+............++++.+|+.+||+.|
T Consensus 183 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~ 262 (288)
T cd05093 183 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQRE 262 (288)
T ss_pred CccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCC
Confidence 467889999999988899999999999999999996688886543322 222222222223345689999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|.+|||+.++++
T Consensus 263 p~~Rpt~~~v~~ 274 (288)
T cd05093 263 PHMRLNIKEIHS 274 (288)
T ss_pred hhhCCCHHHHHH
Confidence 999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=320.39 Aligned_cols=255 Identities=25% Similarity=0.336 Sum_probs=188.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecC-----CeE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQ-----DFV 542 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~-----~~~ 542 (934)
..+.|.+.+.||+|+||.||++.. .+++.||+|++..... ....+|+..+.+..+||||+++++++... +..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 346688899999999999999855 5688999999865432 33445665443334899999999998753 468
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+||||+. +|+|.++++... .....+++..++.++.|++.||+||
T Consensus 100 ~lv~ey~~----------~~sL~~~~~~~~-------------------------~~~~~~~~~~~~~~~~qi~~al~~l 144 (291)
T cd06639 100 WLVLELCN----------GGSVTELVKGLL-------------------------ICGQRLDEAMISYILYGALLGLQHL 144 (291)
T ss_pred EEEEEECC----------CCcHHHHHHHhh-------------------------hcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999554 444444432210 0123467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+.+|+||||||+||+++.++. +||+|||+++.+....... ..
T Consensus 145 H~~~ivH~dlkp~nili~~~~~--~kl~dfg~~~~~~~~~~~~-----------------------------------~~ 187 (291)
T cd06639 145 HNNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTSTRLRR-----------------------------------NT 187 (291)
T ss_pred HhCCeeccCCCHHHEEEcCCCC--EEEeecccchhcccccccc-----------------------------------cC
Confidence 9999999999999999976654 8999999998764322110 01
Q ss_pred CCCCCccccchhcccCC-----CcccccccchhhhhHHhhcCCCCCCCCchh-H-HHHHHhhcccc--cccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGR-----QTRAIDLFSLGCILFFCITGGKHPYGESFE-R-DANIVKDRKDL--FLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~-----~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~-~~~i~~~~~~~--~~~~~~~e~~dL 773 (934)
..|+..|+|||++.... ++.++|||||||++|||++| .+||..... . ...+....... .+.....++.+|
T Consensus 188 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 266 (291)
T cd06639 188 SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG-DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHF 266 (291)
T ss_pred ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC-CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHH
Confidence 35889999999986433 68899999999999999996 677765432 1 12222221111 122345789999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
|.+||+.||++||++.++++||||.
T Consensus 267 i~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 267 ISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHhhcChhhCcCHHHHhcCcccC
Confidence 9999999999999999999999983
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=317.76 Aligned_cols=243 Identities=30% Similarity=0.456 Sum_probs=183.4
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChh
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
..||+|+||+||++.. .+++.||+|.+...... ...+|+. +++.++|+||+++++++.+++..|+++|++.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~---- 88 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIA-LHSYLKHRNIVQYLGSDSENGFFKIFMEQVP---- 88 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHH-HHHhcCCCCeeeeeeeeccCCEEEEEEecCC----
Confidence 4799999999999854 46789999988655332 3345554 7788999999999999999999999999554
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCC--CHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGH--PSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
+++|.+++... ...+ ++..+..++.||+.||+|||++||+||||
T Consensus 89 ------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl 134 (268)
T cd06624 89 ------GGSLSALLRSK----------------------------WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDI 134 (268)
T ss_pred ------CCCHHHHHHHh----------------------------cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 44555444321 0112 56678889999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
||+||+++.+.. .++|+|||++..+....... ....|++.|+||
T Consensus 135 ~p~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~~~aP 178 (268)
T cd06624 135 KGDNVLVNTYSG-VVKISDFGTSKRLAGINPCT-----------------------------------ETFTGTLQYMAP 178 (268)
T ss_pred CHHHEEEcCCCC-eEEEecchhheecccCCCcc-----------------------------------ccCCCCccccCh
Confidence 999999965332 59999999997654321110 013478999999
Q ss_pred hhcccCC--CcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH----hhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 713 EQLLQGR--QTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV----KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 713 E~l~~~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~----~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|++.+.. ++.++|||||||++|+|++| .+||........... .......+....+++.+|+.+||+.+|++||
T Consensus 179 E~~~~~~~~~~~~~Dv~slGvvl~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 257 (268)
T cd06624 179 EVIDKGPRGYGAPADIWSLGCTIVEMATG-KPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRA 257 (268)
T ss_pred hhhccccccCCchhhhHHHHHHHHHHHhC-CCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCC
Confidence 9987644 78999999999999999996 677754322111111 1112223344567899999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
|+.+++.||||
T Consensus 258 t~~~ll~~~~~ 268 (268)
T cd06624 258 SAHDLLQDPFL 268 (268)
T ss_pred CHHHHHhCCCC
Confidence 99999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=337.24 Aligned_cols=286 Identities=22% Similarity=0.344 Sum_probs=191.8
Q ss_pred cceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCC
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQD 540 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~ 540 (934)
.+.|.+.+.||+|+||+||++... .+..||||++..... +...+|+. +++.+ .|||||++++++.+.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~-~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELK-IMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHH-HHHhcCCCCCeeeEEEEEccCC
Confidence 456888899999999999997542 234799999965432 34566776 56666 4999999999999999
Q ss_pred eEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhc-------------------------cc-------------------
Q 002343 541 FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQ-------------------------DS------------------- 575 (934)
Q Consensus 541 ~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~-------------------------~~------------------- 575 (934)
.+|||||||. ++|.+++......+......... ..
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999776 35665553321111000000000 00
Q ss_pred ----hhHHHHHHhh-cc----cccchhhhHhhh---hCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCC
Q 002343 576 ----NLLNEVRIRL-LP----VMENTKDIELWK---ANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643 (934)
Q Consensus 576 ----~~~~~~~~~~-~~----~~~~~~~~~~~~---~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~ 643 (934)
........+. .+ ............ ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence 0000000000 00 000000001111 24688999999999999999999999999999999999997654
Q ss_pred CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCccc
Q 002343 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723 (934)
Q Consensus 644 ~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~k 723 (934)
.+||+|||+++.+......... ....|+..|+|||++.+..++.+
T Consensus 275 --~~kL~DfGla~~~~~~~~~~~~---------------------------------~~~~~~~~y~aPE~~~~~~~~~~ 319 (400)
T cd05105 275 --IVKICDFGLARDIMHDSNYVSK---------------------------------GSTFLPVKWMAPESIFDNLYTTL 319 (400)
T ss_pred --EEEEEeCCcceecccccccccc---------------------------------CCcCCCcceEChhhhcCCCCCch
Confidence 5999999999876443221110 01347789999999999899999
Q ss_pred ccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 724 IDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 724 sDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
+|||||||++|||++.+..||..... .....+... ........+.++.++|.+||+.||++||++.+|.+
T Consensus 320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 320 SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 99999999999999855677755322 122222222 12223445678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=316.71 Aligned_cols=243 Identities=29% Similarity=0.417 Sum_probs=190.0
Q ss_pred ecccCcEEEEEEEEe-cCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||.|+||+||++... +++.||+|++.+... +...+|++ +++.++||||+++++.+.+++..|++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e------ 73 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKE-ILEECNHPFIVKLYRTFKDKKYIYMLME------ 73 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHH-HHHhCCCCCEeeeeeeEEcCCccEEEEe------
Confidence 799999999998553 589999999865331 23344554 7788899999999999999999999999
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
|+.+|+|.+++.. ...+++..+..++.||+.||+|||+++++|+|||
T Consensus 74 ----~~~~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 74 ----YCLGGELWTILRD-----------------------------RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ----cCCCCcHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 5555666665532 2235778889999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+||+++.++ .++|+|||+++.+...... ....|++.|+|||
T Consensus 121 ~~nilv~~~~--~~~l~df~~~~~~~~~~~~------------------------------------~~~~~~~~~~~PE 162 (262)
T cd05572 121 PENLLLDSNG--YVKLVDFGFAKKLKSGQKT------------------------------------WTFCGTPEYVAPE 162 (262)
T ss_pred HHHEEEcCCC--CEEEeeCCcccccCccccc------------------------------------ccccCCcCccChh
Confidence 9999997665 4999999999876543210 0135889999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCch---hHHH-HHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcC-
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF---ERDA-NIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK- 787 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~~~~-~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT- 787 (934)
.+.+..++.++|+|||||++|+|++| .+||.... .... .+.. ......+...++++.++|.+||+.||++||+
T Consensus 163 ~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 241 (262)
T cd05572 163 IILNKGYDFSVDYWSLGILLYELLTG-RPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGN 241 (262)
T ss_pred HhcCCCCCChhhhhhhHHHHHHHHhC-CCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCC
Confidence 99888899999999999999999996 67776543 1111 2221 1222233344689999999999999999999
Q ss_pred ----HHHHHcCCCCCCccc
Q 002343 788 ----AQNVLNHPFFWTADT 802 (934)
Q Consensus 788 ----a~evL~HPff~~~~~ 802 (934)
+.|+++||||.+.++
T Consensus 242 ~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 242 LKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred cccCHHHHhcChhhhCCCC
Confidence 999999999976544
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=314.45 Aligned_cols=244 Identities=32% Similarity=0.463 Sum_probs=189.6
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
|...+.||+|+||+||++... +++.||+|.+..... +...+|+. +++.++||||+++++++.++...|++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIA-LLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHH-HHHhcCCCCchheeeeEecCCeEEEE
Confidence 455688999999999998654 789999999865331 23445554 77888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||++ +++|.+++.. ...+++..+..++.||+.||+|||+.
T Consensus 81 ~e~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 81 LELVP----------GGSLAKLLKK-----------------------------YGSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred EEecC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99655 3444444321 12356778889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+|+||||+||+++.++ .+||+|||++......... ....|
T Consensus 122 ~i~H~dl~~~ni~~~~~~--~~kl~d~~~~~~~~~~~~~------------------------------------~~~~~ 163 (258)
T cd06632 122 NTVHRDIKGANILVDTNG--VVKLADFGMAKQVVEFSFA------------------------------------KSFKG 163 (258)
T ss_pred CcccCCCCHHHEEECCCC--CEEEccCccceeccccccc------------------------------------cccCC
Confidence 999999999999997665 4999999998876433200 01458
Q ss_pred CCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHh-hcccccccCCCHHHHHHHHHcccCC
Q 002343 706 SSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVK-DRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 706 T~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~-~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+..|+|||.+.... ++.++|+|||||++|+|++| .+||........ .+.. ......+....+++.+++.+||+.+
T Consensus 164 ~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 242 (258)
T cd06632 164 SPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATG-KPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRD 242 (258)
T ss_pred CcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhC-CCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcC
Confidence 89999999998776 89999999999999999996 778866543222 1111 1122233445688999999999999
Q ss_pred CCCCcCHHHHHcCCCC
Q 002343 782 PDLRPKAQNVLNHPFF 797 (934)
Q Consensus 782 P~~RPTa~evL~HPff 797 (934)
|++||++.+++.|||+
T Consensus 243 p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 243 PSLRPTAAELLEHPFV 258 (258)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=323.13 Aligned_cols=268 Identities=24% Similarity=0.275 Sum_probs=192.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||.||++.. ..++.||+|.+.+... ....+|+. ++..++||||+++++.+..+++.|+||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERD-ILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHH-HHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 467788999999999999854 5688999999875431 12334544 778899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|++ .+|+|.+++.. ...+++..+..++.|++.||+|||+++
T Consensus 81 e~~----------~g~~L~~~l~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (305)
T cd05609 81 EYV----------EGGDCATLLKN-----------------------------IGALPVDMARMYFAETVLALEYLHNYG 121 (305)
T ss_pred ecC----------CCCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 954 44555555432 234577888899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++................ ........+...|+
T Consensus 122 i~H~dl~p~NIll~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 179 (305)
T cd05609 122 IVHRDLKPDNLLITSMG--HIKLTDFGLSKIGLMSLTTNLYEGHIE--------------------KDTREFLDKQVCGT 179 (305)
T ss_pred ccccCCchHHEEECCCC--CEEEeeCCCccccCcCccccccccccc--------------------cchhhccccCCccC
Confidence 99999999999997665 489999999874321111000000000 00000001124588
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcc---cccccCCCHHHHHHHHHcccCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK---DLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~---~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
..|+|||.+.+..++.++|||||||++|||++|..++++.............. .......++++.++|.+||+.||+
T Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 259 (305)
T cd05609 180 PEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPL 259 (305)
T ss_pred ccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChh
Confidence 89999999998889999999999999999999744433433333222222211 111123567899999999999999
Q ss_pred CCcC---HHHHHcCCCCCCccch
Q 002343 784 LRPK---AQNVLNHPFFWTADTR 803 (934)
Q Consensus 784 ~RPT---a~evL~HPff~~~~~~ 803 (934)
+||+ +.++++||||...+..
T Consensus 260 ~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 260 ERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred hccCccCHHHHHhCccccCCCHH
Confidence 9998 7999999999665543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=316.87 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=189.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
..|.+.+.||+|+||+||++.. ..++.||+|.+..... ....+|+. ++..++||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHH-HHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 3477788999999999999854 4588999999875543 24556665 777789999999999999999999999954
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.+|+|.+++.... ...+++..++.++.|++.||+|||+++|+|
T Consensus 85 ----------~~~~L~~~~~~~~---------------------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 127 (263)
T cd05052 85 ----------TYGNLLDYLRECN---------------------------RQEVNAVVLLYMATQISSAMEYLEKKNFIH 127 (263)
T ss_pred ----------CCCcHHHHHHhCC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 4445554443210 234577888999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++........... ...++..|
T Consensus 128 ~dlkp~nil~~~~~--~~kl~df~~~~~~~~~~~~~~~----------------------------------~~~~~~~y 171 (263)
T cd05052 128 RDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAHA----------------------------------GAKFPIKW 171 (263)
T ss_pred cccCcceEEEcCCC--cEEeCCCccccccccceeeccC----------------------------------CCCCcccc
Confidence 99999999997665 4999999999876542211000 02246789
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhh-cccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||.+.+..++.++|||||||++|||++++..||... .......+.. .....+...++++.++|.+||+.||++||+
T Consensus 172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 251 (263)
T cd05052 172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPS 251 (263)
T ss_pred CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence 99999998899999999999999999999667777543 3333233322 222334456789999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.++++
T Consensus 252 ~~~l~~ 257 (263)
T cd05052 252 FAEIHQ 257 (263)
T ss_pred HHHHHH
Confidence 999975
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=332.55 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=187.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecC-------
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQ------- 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~------- 539 (934)
++.+|.+.+.||.|+||+||++.. .+|+.||+|.+..... +...+|+. +++.++||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~-~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIK-IIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHH-HHHhcCCCcchhhHhhhcccccccccc
Confidence 357899999999999999999854 5689999999865432 33456665 77888999999999876553
Q ss_pred -------CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHH
Q 002343 540 -------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (934)
Q Consensus 540 -------~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 612 (934)
...|+||||+.++|.+++. ...+++..++.++
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~l~~~~~~~~~ 120 (342)
T cd07854 82 VGSLTELNSVYIVQEYMETDLANVLE-----------------------------------------QGPLSEEHARLFM 120 (342)
T ss_pred cccccccceEEEEeecccccHHHHHH-----------------------------------------cCCCCHHHHHHHH
Confidence 3689999988765544331 2346778899999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccc
Q 002343 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECV 692 (934)
Q Consensus 613 ~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (934)
.||+.||+|||++||+||||||+|||++.++ ..+||+|||+++.+.........
T Consensus 121 ~qi~~aL~~LH~~givH~dikp~Nili~~~~-~~~kl~dfg~~~~~~~~~~~~~~------------------------- 174 (342)
T cd07854 121 YQLLRGLKYIHSANVLHRDLKPANVFINTED-LVLKIGDFGLARIVDPHYSHKGY------------------------- 174 (342)
T ss_pred HHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-ceEEECCcccceecCCccccccc-------------------------
Confidence 9999999999999999999999999997544 35899999999866432111100
Q ss_pred cccccceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhh------------
Q 002343 693 FQFGVLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKD------------ 757 (934)
Q Consensus 693 ~~~g~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~------------ 757 (934)
.....|+..|+|||++.+ ..++.++|||||||++|+|++| ..||..... ... .+...
T Consensus 175 -------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07854 175 -------LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG-KPLFAGAHELEQMQLILESVPVVREEDRNEL 246 (342)
T ss_pred -------cccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 011357889999998765 4578899999999999999997 556643211 111 11100
Q ss_pred -----------c-cc-----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 758 -----------R-KD-----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 758 -----------~-~~-----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
. .. ......+.++.+||.+||+.||.+|||++++++||||..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 247 LNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred hhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 0 00 011234578999999999999999999999999999964
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=318.92 Aligned_cols=239 Identities=21% Similarity=0.293 Sum_probs=178.3
Q ss_pred eeecccCcEEEEEEEEe-------------cCcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 479 KEIAKGSNGTVVLEGNY-------------EGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~-------------~g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.||+|+||.||++... ....||+|.+.....+ ..+.|+..++..++||||+++++++.++...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 36899999999997432 1236899987654332 23444455888999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||++ |+|..++... ...+++.+++.++.||+.||+|||
T Consensus 81 lv~e~~~~----------~~l~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH 122 (262)
T cd05077 81 MVEEFVEF----------GPLDLFMHRK----------------------------SDVLTTPWKFKVAKQLASALSYLE 122 (262)
T ss_pred EEEecccC----------CCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99996664 3333333211 234577888999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCC-----ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 624 EIGLIHRDLKPQNVLISKDKS-----FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~-----~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
+++|+||||||+|||++.++. ..+|++|||++.......
T Consensus 123 ~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~------------------------------------ 166 (262)
T cd05077 123 DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ------------------------------------ 166 (262)
T ss_pred hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc------------------------------------
Confidence 999999999999999975442 238999999986543211
Q ss_pred eeecCCCCCccccchhcc-cCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHc
Q 002343 699 FFTVGYGSSGWQAPEQLL-QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~-~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
...|+..|+|||++. +..++.++|||||||++|||++++..|+.......................+++.+||.+|
T Consensus 167 ---~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 243 (262)
T cd05077 167 ---ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHC 243 (262)
T ss_pred ---cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHH
Confidence 134788999999987 4568999999999999999997678888654332222221222222233457899999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||.+||++.+|+++
T Consensus 244 l~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 244 MNYDPNQRPFFRAIMRD 260 (262)
T ss_pred cCCChhhCcCHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=321.50 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=189.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|++|+||++.. .+|+.||+|.+..... +...+|++ +++.++||||+++++++.+.+..|+|||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREIS-LLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHH-HHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 577889999999999999854 4789999998864321 23455655 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|++++|.+.+.. . ....+++..++.++.||+.||+|||+++|
T Consensus 82 ~~~~~l~~~~~~-----------~---------------------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 123 (294)
T PLN00009 82 YLDLDLKKHMDS-----------S---------------------------PDFAKNPRLIKTYLYQILRGIAYCHSHRV 123 (294)
T ss_pred cccccHHHHHHh-----------C---------------------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 876655444311 0 01123567788999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++. .+||+|||++.......... +...|++
T Consensus 124 ~H~dl~p~nill~~~~~-~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 167 (294)
T PLN00009 124 LHRDLKPQNLLIDRRTN-ALKLADFGLARAFGIPVRTF-----------------------------------THEVVTL 167 (294)
T ss_pred eCCCCCcceEEEECCCC-EEEEcccccccccCCCcccc-----------------------------------ccCceee
Confidence 99999999999975443 58999999997654321110 1134788
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhh--cc------------------c----
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKD--RK------------------D---- 760 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~--~~------------------~---- 760 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||...... ...+... .+ .
T Consensus 168 ~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (294)
T PLN00009 168 WYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPP 246 (294)
T ss_pred cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCC
Confidence 99999998764 578999999999999999996 7777543221 1111110 00 0
Q ss_pred ----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 761 ----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 761 ----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
......++++.++|.+||+.||++||++.++++||||.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 247 KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 01123467899999999999999999999999999996543
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=316.61 Aligned_cols=246 Identities=24% Similarity=0.355 Sum_probs=188.5
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.|.+.+.||+|+||.||++....+..+|+|.+.+... +...+|+. +++.++||||+++++++.+.+..|+|||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~- 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAK-VMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA- 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHH-HHHhCCCCCEEEEEEEEcCCCceEEEEecCC-
Confidence 3667889999999999998766677899999865432 34556665 7788899999999999999999999999554
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+++|.+++... ...+++..++.++.||+.||+|||++||+|||
T Consensus 83 ---------~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 125 (256)
T cd05059 83 ---------NGCLLNYLRER----------------------------KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRD 125 (256)
T ss_pred ---------CCCHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 44555544321 12357788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||+++.++ .+||+|||+++........... ...++..|+|
T Consensus 126 l~p~ni~i~~~~--~~kl~dfg~~~~~~~~~~~~~~----------------------------------~~~~~~~y~~ 169 (256)
T cd05059 126 LAARNCLVGEDN--VVKVSDFGLARYVLDDQYTSSQ----------------------------------GTKFPVKWAP 169 (256)
T ss_pred ccHhhEEECCCC--cEEECCcccceecccccccccC----------------------------------CCCCCccccC
Confidence 999999997665 4999999999865432111000 0124567999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||.+.+..++.++|||||||++|+|++++.+||...... ....+... ....+...++++.+++.+||..+|++|||+.
T Consensus 170 Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ 249 (256)
T cd05059 170 PEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFK 249 (256)
T ss_pred HHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 999999899999999999999999999778888653322 22222211 2222334578999999999999999999999
Q ss_pred HHHcC
Q 002343 790 NVLNH 794 (934)
Q Consensus 790 evL~H 794 (934)
++++.
T Consensus 250 ~~l~~ 254 (256)
T cd05059 250 KLLSQ 254 (256)
T ss_pred HHHHH
Confidence 99864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=333.40 Aligned_cols=287 Identities=21% Similarity=0.304 Sum_probs=191.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-C
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-Q 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~ 539 (934)
.+++|.+.+.||+|+||.||++.. .+++.||+|++..... +...+|+..+.+..+||||+++++++.. +
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 345788899999999999998732 2357899999864322 2455677744443489999999998765 4
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchh-------------HHH----------HHHhhcccccchhhh
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNL-------------LNE----------VRIRLLPVMENTKDI 595 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~-------------~~~----------~~~~~~~~~~~~~~~ 595 (934)
..+|++|||+.+ +|.+++.........+.... ..... ... ....... .+.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 162 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKS-TRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD-VEEDEEG 162 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhcccccccccccc-ccccccccccccccccccCCccccccccccccCcchhh-cccchhh
Confidence 679999996653 55555432211100000000 00000 000 0000000 0000001
Q ss_pred HhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchh
Q 002343 596 ELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQ 675 (934)
Q Consensus 596 ~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~ 675 (934)
.......+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~~~-------- 232 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRK-------- 232 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchhhc--------
Confidence 112245789999999999999999999999999999999999997655 4999999999876543221111
Q ss_pred hHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHH
Q 002343 676 LVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDAN 753 (934)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~ 753 (934)
....|+..|+|||++.+..++.++|||||||++|||++.+..||.... +....
T Consensus 233 -------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~ 287 (337)
T cd05054 233 -------------------------GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287 (337)
T ss_pred -------------------------cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH
Confidence 013467789999999999999999999999999999985577875432 11122
Q ss_pred HHhh-cccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 754 IVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 754 i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
.+.. .....+....+++.+++.+||+.+|++||++.++++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 288 RLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2222 2222234456899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=323.94 Aligned_cols=252 Identities=27% Similarity=0.427 Sum_probs=191.2
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||+||++... +|+.||+|.+..... ....+|+. ++..++||||+++++++..++..|+||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELD-ILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHH-HHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 3566789999999999998554 789999998864322 23455655 67788999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
|.+ ++|..++.... ....+++..+..++.||+.||.|||+ .+|
T Consensus 81 ~~~----------~~l~~~~~~~~--------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i 124 (286)
T cd06622 81 MDA----------GSLDKLYAGGV--------------------------ATEGIPEDVLRRITYAVVKGLKFLKEEHNI 124 (286)
T ss_pred cCC----------CCHHHHHHhcc--------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 654 34433332110 01356788999999999999999997 599
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++ .+||+|||++..+..... ....|++
T Consensus 125 ~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~-------------------------------------~~~~~~~ 165 (286)
T cd06622 125 IHRDVKPTNVLVNGNG--QVKLCDFGVSGNLVASLA-------------------------------------KTNIGCQ 165 (286)
T ss_pred eeCCCCHHHEEECCCC--CEEEeecCCcccccCCcc-------------------------------------ccCCCcc
Confidence 9999999999997654 499999999876532211 0135888
Q ss_pred ccccchhcccC------CCcccccccchhhhhHHhhcCCCCCCCCch-hHHH----HHHhhcccccccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLLQG------RQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA----NIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~~~------~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~----~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
.|+|||++.+. .++.++|||||||++|+|++| ..||.... .... .+........+...++++.+||.+
T Consensus 166 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 244 (286)
T cd06622 166 SYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG-RYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAK 244 (286)
T ss_pred CccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhC-CCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHH
Confidence 99999998654 358899999999999999996 66775432 2211 122222233344567899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||+.+|++||+++++++||||.....
T Consensus 245 ~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 245 CLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred HcccCcccCCCHHHHhcChhhhhccC
Confidence 99999999999999999999966543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=319.12 Aligned_cols=257 Identities=22% Similarity=0.293 Sum_probs=192.0
Q ss_pred cceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
++.|.+.+.||+|+||+||++... .+..||+|.+..... ....+|+. +++.++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL-IMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCC
Confidence 356888899999999999998554 467899998864432 23455554 7788999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||++. +|+|.+++........ ....+++.+++.++.||+.||+|
T Consensus 84 ~~lv~e~~~----------g~~L~~~i~~~~~~~~----------------------~~~~~~~~~~~~~~~qi~~~l~~ 131 (277)
T cd05036 84 RFILLELMA----------GGDLKSFLRENRPRPE----------------------RPSSLTMKDLLFCARDVAKGCKY 131 (277)
T ss_pred cEEEEecCC----------CCCHHHHHHHhCCCCC----------------------CCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999554 4444444432211000 02246788999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
||+++++||||||+|||++.++ ...+||+|||+++.+......... .
T Consensus 132 LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~-~------------------------------- 179 (277)
T cd05036 132 LEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKG-G------------------------------- 179 (277)
T ss_pred HHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecC-C-------------------------------
Confidence 9999999999999999997544 345899999999876332111000 0
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHh-hcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVK-DRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...++..|+|||++.+..++.++|||||||++|||++++.+||.... ......+. ......+...+.++.+++.+||
T Consensus 180 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 258 (277)
T cd05036 180 -RAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCW 258 (277)
T ss_pred -CCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 02245689999999988999999999999999999986788886543 22222222 2222334456789999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++||++.+|++|
T Consensus 259 ~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 259 QHTPEDRPNFATILER 274 (277)
T ss_pred CCCcccCcCHHHHHHH
Confidence 9999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=311.61 Aligned_cols=248 Identities=27% Similarity=0.401 Sum_probs=192.4
Q ss_pred eEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|...+.||.|+||.||.+ +..+++.||+|.+.... .....+|+. +++.++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIV-ILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHH-HHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 3778899999999999887 45668999999876432 134556665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.+++... +...+++.++..++.|++.||+|||+.||
T Consensus 80 ~~~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (256)
T cd08221 80 YAN----------GGTLYDKIVRQ---------------------------KGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122 (256)
T ss_pred ecC----------CCcHHHHHHhc---------------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 665 34444444321 02345778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||+++......... ....|++
T Consensus 123 ~h~dl~p~ni~~~~~~--~~kl~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~ 165 (256)
T cd08221 123 LHRDIKTLNIFLTKAG--LIKLGDFGISKILGSEYSMA-----------------------------------ETVVGTP 165 (256)
T ss_pred cccCCChHhEEEeCCC--CEEECcCcceEEcccccccc-----------------------------------cccCCCc
Confidence 9999999999997665 49999999998664432110 0145899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++.+..++.++|||||||++|+|++| ..||... ..... .+............+.++.++|.+||+.+|.+|
T Consensus 166 ~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08221 166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTL-KRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKR 244 (256)
T ss_pred cccCHhhcCCCCCCCcchhHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccC
Confidence 99999999988889999999999999999997 4566443 22222 222222222234456899999999999999999
Q ss_pred cCHHHHHcCCCC
Q 002343 786 PKAQNVLNHPFF 797 (934)
Q Consensus 786 PTa~evL~HPff 797 (934)
|++.++++|||+
T Consensus 245 ~s~~~ll~~~~l 256 (256)
T cd08221 245 PTADEVLDQPLL 256 (256)
T ss_pred CCHHHHhhCcCC
Confidence 999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=319.65 Aligned_cols=246 Identities=28% Similarity=0.440 Sum_probs=188.7
Q ss_pred ecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||+|+||+||++. ..+|+.||+|.+.+... .....|+. +++.++||||+++++++...+..|+||||+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~--- 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKK-ILEKVSSRFIVSLAYAFETKDDLCLVMTLMN--- 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHH-HHHhCCCCCEeeeeeEEecCCeEEEEEecCC---
Confidence 6999999999984 45689999999864321 12344554 7788899999999999999999999999554
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|.+++.... ...+++.+++.++.|++.||.|||++||+|||||
T Consensus 77 -------~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 122 (277)
T cd05577 77 -------GGDLKYHIYNVG---------------------------EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122 (277)
T ss_pred -------CCcHHHHHHHcC---------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 455554443210 1346788899999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++ .+||+|||++......... ....|+..|+|||
T Consensus 123 p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~------------------------------------~~~~~~~~y~~PE 164 (277)
T cd05577 123 PENVLLDDHG--NVRISDLGLAVELKGGKKI------------------------------------KGRAGTPGYMAPE 164 (277)
T ss_pred HHHEEECCCC--CEEEccCcchhhhccCCcc------------------------------------ccccCCCCcCCHH
Confidence 9999997665 4899999998765432110 0134788999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHH---HHHhhcccccccCCCHHHHHHHHHcccCCCCCCc--
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDA---NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP-- 786 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~---~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP-- 786 (934)
++.+..++.++|||||||++|+|++| .+||..... ... ..........+...++++.++|.+||+.||.+||
T Consensus 165 ~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 243 (277)
T cd05577 165 VLQGEVYDFSVDWFALGCTLYEMIAG-RSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGC 243 (277)
T ss_pred HhcCCCCCchhhhHHHHHHHHHHhhC-CCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCC
Confidence 99888899999999999999999996 777754322 111 1111112223344578999999999999999999
Q ss_pred ---CHHHHHcCCCCCCccch
Q 002343 787 ---KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 ---Ta~evL~HPff~~~~~~ 803 (934)
++.++++||||+..+++
T Consensus 244 ~~~~~~~ll~h~~~~~~~~~ 263 (277)
T cd05577 244 RGGSADEVREHPLFKDLNWR 263 (277)
T ss_pred CcccHHHHHhChhhhcCChh
Confidence 89999999999776654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=322.69 Aligned_cols=247 Identities=28% Similarity=0.416 Sum_probs=187.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yL 544 (934)
+.|.+.+.||.|+||+||++... +++.||+|.+..... ....+|+. ++..++||||+++++++.+. +..|+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREIN-ILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHH-HHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 35677889999999999998554 588999999864322 23456665 77788999999999998877 89999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|.++|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 84 v~e~~~~~L~~~~~~~---------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~ 124 (293)
T cd07843 84 VMEYVEHDLKSLMETM---------------------------------------KQPFLQSEVKCLMLQLLSGVAHLHD 124 (293)
T ss_pred EehhcCcCHHHHHHhc---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9998877666554210 1246788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|+||||||+|||++.++ .+||+|||+++.+....... ....
T Consensus 125 ~~i~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~ 167 (293)
T cd07843 125 NWILHRDLKTSNLLLNNRG--ILKICDFGLAREYGSPLKPY-----------------------------------TQLV 167 (293)
T ss_pred CCeeeccCCHHHEEECCCC--cEEEeecCceeeccCCcccc-----------------------------------cccc
Confidence 9999999999999997654 59999999998765432110 0134
Q ss_pred CCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhc-----------------------
Q 002343 705 GSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDR----------------------- 758 (934)
Q Consensus 705 GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~----------------------- 758 (934)
+++.|+|||.+.+.. ++.++|||||||++|+|++| .+||...... .. .+....
T Consensus 168 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (293)
T cd07843 168 VTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK-KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFT 246 (293)
T ss_pred ccccccCchhhcCCccccchhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccc
Confidence 788999999987654 68999999999999999996 6676543211 11 110000
Q ss_pred -------ccccccC-CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 759 -------KDLFLVE-HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 759 -------~~~~~~~-~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
...+... .++.+.+||.+||+.||++|||+.|+++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 247 KYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0001111 36778999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=326.71 Aligned_cols=247 Identities=24% Similarity=0.297 Sum_probs=187.1
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCc----EEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGR----SVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~----~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..|...+.||+|+||+||++... +|+ .||||.+..... +...+|+ .+++.++||||++++|++... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA-YVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 45788899999999999998543 343 499999864432 2334444 478899999999999998875 577
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+++| ++.+|+|.+++... ...+++..++.++.||+.||+|||
T Consensus 85 ~v~e----------~~~~g~l~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~L~~LH 126 (316)
T cd05108 85 LITQ----------LMPFGCLLDYVREH----------------------------KDNIGSQYLLNWCVQIAKGMNYLE 126 (316)
T ss_pred eeee----------cCCCCCHHHHHHhc----------------------------cccCCHHHHHHHHHHHHHHHHHHH
Confidence 8999 55566666665431 123567788999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++.+.......... ..
T Consensus 127 ~~~iiH~dlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~~---------------------------------~~ 171 (316)
T cd05108 127 ERRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGADEKEYHAE---------------------------------GG 171 (316)
T ss_pred hcCeeccccchhheEecCCC--cEEEccccccccccCCCcceecc---------------------------------CC
Confidence 99999999999999997665 48999999998765433211110 12
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhccc-ccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKD-LFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~-~~~~~~~~e~~dLI~~~L~~D 781 (934)
.++..|+|||++.+..++.++|||||||++|||++.+.+||..... ....+...... ..+.....++.+++.+||..|
T Consensus 172 ~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 251 (316)
T cd05108 172 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 251 (316)
T ss_pred ccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 3567899999999999999999999999999999855788865433 22333332221 223345678999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++||++.+++.+
T Consensus 252 p~~Rps~~~l~~~ 264 (316)
T cd05108 252 ADSRPKFRELIIE 264 (316)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999986
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=316.21 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=186.7
Q ss_pred EEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe-----
Q 002343 476 VFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDF----- 541 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~----- 541 (934)
.+.+.||+|+||+||.+.... +..||||++..... +...+|+. +++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAA-CMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHH-HHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999985542 36899999864322 23455655 7788999999999998866543
Q ss_pred -EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 -VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 -~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+++|| |+.+|+|..++....... ....+++..++.++.|++.||+
T Consensus 81 ~~~~v~e----------~~~~~~l~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~~~i~~aL~ 127 (273)
T cd05035 81 KPMVILP----------FMKHGDLHSFLLYSRLGG-----------------------LPEKLPLQTLLKFMVDIALGME 127 (273)
T ss_pred ccEEEEe----------ccCCCCHHHHHHHhhccC-----------------------CcccCCHHHHHHHHHHHHHHHH
Confidence 899999 555556655553211000 1234688889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+++|+||||||+|||++.++ .+||+|||+++............
T Consensus 128 ~lH~~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~-------------------------------- 173 (273)
T cd05035 128 YLSNRNFIHRDLAARNCMLREDM--TVCVADFGLSKKIYSGDYYRQGR-------------------------------- 173 (273)
T ss_pred HHHhCCeeccccchheEEECCCC--eEEECCccceeeccccccccccc--------------------------------
Confidence 99999999999999999997654 58999999998765432211100
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...++..|+|||++.+..++.++|||||||++|||++++.+||....... .. +........+...++++.++|.+||
T Consensus 174 -~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 252 (273)
T cd05035 174 -IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCW 252 (273)
T ss_pred -cccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHc
Confidence 02356789999999888899999999999999999997788886543322 22 2222223334456789999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++|||+.+++++
T Consensus 253 ~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 253 RADPKDRPTFTKLREV 268 (273)
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=317.31 Aligned_cols=244 Identities=27% Similarity=0.442 Sum_probs=192.8
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
|.+.+.||.|+||.||++... +++.||+|.+.+.. .+...+|++ +++.++||||+++++++.+++..|+|+|
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERR-ILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHH-HHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 677899999999999998554 68999999997532 123455555 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|. +++|.+++.. ...+++.++..++.||+.||.|||+++|
T Consensus 81 ~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~~i~~~l~~lh~~~i 121 (258)
T cd05578 81 LLL----------GGDLRYHLSQ-----------------------------KVKFSEEQVKFWICEIVLALEYLHSKGI 121 (258)
T ss_pred CCC----------CCCHHHHHHh-----------------------------cCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 654 4444444321 1346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+|+||||+||+++.++. ++|+|||++......... ....|+.
T Consensus 122 ~h~dl~~~nil~~~~~~--~~l~d~~~~~~~~~~~~~------------------------------------~~~~~~~ 163 (258)
T cd05578 122 IHRDIKPDNILLDEQGH--VHITDFNIATKVTPDTLT------------------------------------TSTSGTP 163 (258)
T ss_pred eccCCCHHHeEEcCCCC--EEEeecccccccCCCccc------------------------------------cccCCCh
Confidence 99999999999976654 899999998876443210 0135788
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
.|+|||.+.+..++.++|+|||||++|+|++| ..||.... ..............+...+.++.++|.+||+.||.
T Consensus 164 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 242 (258)
T cd05578 164 GYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG-KRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQ 242 (258)
T ss_pred hhcCHHHHcccCCCCcccchhhHHHHHHHHhC-CCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChh
Confidence 99999999988899999999999999999996 66665433 22222222233334455668999999999999999
Q ss_pred CCcCH--HHHHcCCCC
Q 002343 784 LRPKA--QNVLNHPFF 797 (934)
Q Consensus 784 ~RPTa--~evL~HPff 797 (934)
+||++ +|+++||||
T Consensus 243 ~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 243 KRLGDNLKDLKNHPYF 258 (258)
T ss_pred HcCCccHHHHhcCCCC
Confidence 99999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=313.71 Aligned_cols=241 Identities=25% Similarity=0.375 Sum_probs=182.9
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
+.||+|+||+||++.. .+++.||+|.+..... ....+|+. +++.++||||+++++++.+.+..|+||||+.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--- 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEAR-ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ--- 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEcCCCCeEEEEeecc---
Confidence 3699999999999854 5789999998764432 23455655 7788999999999999999999999999554
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+++|.+++... ...+++.+++.++.|++.||+|||+++|+|||||
T Consensus 77 -------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~ 121 (252)
T cd05084 77 -------GGDFLTFLRTE----------------------------GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLA 121 (252)
T ss_pred -------CCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 44555444321 1235778889999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++ .+||+|||+++........... ....++..|+|||
T Consensus 122 p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~---------------------------------~~~~~~~~y~aPE 166 (252)
T cd05084 122 ARNCLVTEKN--VLKISDFGMSREEEDGVYASTG---------------------------------GMKQIPVKWTAPE 166 (252)
T ss_pred hheEEEcCCC--cEEECccccCcccccccccccC---------------------------------CCCCCceeecCch
Confidence 9999997665 4999999999765432110000 0012355799999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHH
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNV 791 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ev 791 (934)
.+.++.++.++|||||||++|||++++.+||...... ....+ .......+...+.++.+|+.+||+.||++|||+.++
T Consensus 167 ~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 246 (252)
T cd05084 167 ALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTV 246 (252)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 9999899999999999999999998678888654332 22222 222223334456899999999999999999999999
Q ss_pred Hc
Q 002343 792 LN 793 (934)
Q Consensus 792 L~ 793 (934)
++
T Consensus 247 ~~ 248 (252)
T cd05084 247 HQ 248 (252)
T ss_pred HH
Confidence 74
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=326.83 Aligned_cols=248 Identities=26% Similarity=0.361 Sum_probs=197.5
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+...+.+.||+|-||.|-++....+..||||.++.... ....+||+ +|.+++|||||+++|+|..++.+++++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIk-iLsqLkhPNIveLvGVC~~DePicmI~E- 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIK-ILSRLKHPNIVELLGVCVQDDPLCMITE- 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHH-HHhccCCCCeeEEEeeeecCCchHHHHH-
Confidence 45677889999999999998777789999999976544 34567776 7788899999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
||++|+|.+||...+... +......+|+.||++||+||.+.++|
T Consensus 616 ---------YmEnGDLnqFl~aheapt---------------------------~~t~~~vsi~tqiasgmaYLes~nfV 659 (807)
T KOG1094|consen 616 ---------YMENGDLNQFLSAHELPT---------------------------AETAPGVSICTQIASGMAYLESLNFV 659 (807)
T ss_pred ---------HHhcCcHHHHHHhccCcc---------------------------cccchhHHHHHHHHHHHHHHHhhchh
Confidence 999999999987543211 12234567999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||.++|+|+ ++++++||+|||+++.+..+.....+.. .+-...
T Consensus 660 Hrd~a~rNcLv--~~e~~iKiadfgmsR~lysg~yy~vqgr---------------------------------~vlpiR 704 (807)
T KOG1094|consen 660 HRDLATRNCLV--DGEFTIKIADFGMSRNLYSGDYYRVQGR---------------------------------AVLPIR 704 (807)
T ss_pred hccccccceee--cCcccEEecCcccccccccCCceeeecc---------------------------------eeeeee
Confidence 99999999999 6667899999999998876655443322 123568
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcC-CCCCCCCchhHHHHH-----Hhhcc----cccccCCCHHHHHHHHHcc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITG-GKHPYGESFERDANI-----VKDRK----DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltG-g~~Pf~~~~~~~~~i-----~~~~~----~~~~~~~~~e~~dLI~~~L 778 (934)
|||||.+..+++|.++|||+||+++||+++- +..||++..+++..- ..... ...+.-++.++.+|+.+||
T Consensus 705 wmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw 784 (807)
T KOG1094|consen 705 WMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCW 784 (807)
T ss_pred ehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHh
Confidence 9999999999999999999999999998763 567888765543211 11111 1122334568899999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
..|-++||+++++-.
T Consensus 785 ~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 785 RRESEQRPSFEQLHL 799 (807)
T ss_pred chhhhcCCCHHHHHH
Confidence 999999999999854
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=318.83 Aligned_cols=259 Identities=25% Similarity=0.356 Sum_probs=196.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|...+.||+|+||.||++.. .+++.||||.+..... ....+|+. ++..++||||+++++++.++++.|+||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHH-HHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 456678899999999999844 5689999998764432 22334444 77889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++. ...+++..+..++.|++.||.|||+.||+
T Consensus 84 ~~~----------~~l~~~i~------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (277)
T cd06641 84 LGG----------GSALDLLE------------------------------PGPLDETQIATILREILKGLDYLHSEKKI 123 (277)
T ss_pred CCC----------CcHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHccCCee
Confidence 653 33333322 12356778899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++ .++|+|||+++.+....... ....|+..
T Consensus 124 h~dl~p~Ni~i~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 166 (277)
T cd06641 124 HRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKR-----------------------------------NTFVGTPF 166 (277)
T ss_pred cCCCCHHhEEECCCC--CEEEeecccceecccchhhh-----------------------------------ccccCCcc
Confidence 999999999997665 48999999987654321100 01357889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||.+.+...+.++|||||||++|+|++| ..||....... ...+ ...........+.++.++|.+||+.+|.+||
T Consensus 167 y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 245 (277)
T cd06641 167 WMAPEVIKQSAYDSKADIWSLGITAIELAKG-EPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 245 (277)
T ss_pred ccChhhhccCCCCchhhHHHHHHHHHHHHcC-CCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence 9999999888889999999999999999996 67776433221 1212 2222223334567899999999999999999
Q ss_pred CHHHHHcCCCCCCccchhhhhhhhc
Q 002343 787 KAQNVLNHPFFWTADTRLSFLRDVS 811 (934)
Q Consensus 787 Ta~evL~HPff~~~~~~~~fl~~~s 811 (934)
++.++++||||.....+..++..+.
T Consensus 246 ~~~~~l~~~~~~~~~~~~~~~~~~~ 270 (277)
T cd06641 246 TAKELLKHKFIVRFAKKTSYLTELI 270 (277)
T ss_pred CHHHHHhCHHHhhhhhccchHHHHH
Confidence 9999999999977655555554443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=317.98 Aligned_cols=247 Identities=28% Similarity=0.432 Sum_probs=188.4
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
|.+.+.||.|++|+||++.. .+|+.||||++.... .+...+|+. +++.++||||+++++++.+.+..|+||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREIS-LMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHH-HHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 66788999999999999865 468999999986542 234556665 778889999999999999999999999988
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.++|.+++.... ....+++.+++.++.||+.||+|||++||+|
T Consensus 81 ~~~l~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h 123 (284)
T cd07836 81 DKDLKKYMDTHG-------------------------------------VRGALDPNTVKSFTYQLLKGIAFCHENRVLH 123 (284)
T ss_pred CccHHHHHHhcC-------------------------------------CCCCcCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 776655542100 0234678899999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+||+++.++ .++|+|||+++.+....... ....+|..|
T Consensus 124 ~dl~p~ni~~~~~~--~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~y 166 (284)
T cd07836 124 RDLKPQNLLINKRG--ELKLADFGLARAFGIPVNTF-----------------------------------SNEVVTLWY 166 (284)
T ss_pred CCCCHHHEEECCCC--cEEEeecchhhhhcCCcccc-----------------------------------ccccccccc
Confidence 99999999997655 48999999997654321110 013478899
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh--------------ccc------------
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD--------------RKD------------ 760 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~--------------~~~------------ 760 (934)
+|||++.+. .++.++|||||||++|+|++| .+||....... ..+... ...
T Consensus 167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd07836 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITG-RPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD 245 (284)
T ss_pred cChHHhcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHH
Confidence 999998664 468999999999999999996 66775432111 111100 000
Q ss_pred --ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 --LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 --~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
...+..+++++++|.+||+.||.+||++.++++||||
T Consensus 246 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0011235688999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=322.96 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=193.8
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.+.|...+.||+|+||+||++.. .++..||+|++..... ....+|++ +++.++|||++++++++.+++..|
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVK-FLQRIKHPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHH-HHHhCCCCCEEEEEEEEeeCCeEE
Confidence 445577788999999999999854 4688999999864321 23445655 778889999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.++|.+++... ...+++.++..++.||+.||.|||
T Consensus 102 lv~e~~~g~l~~~~~~~---------------------------------------~~~l~~~~~~~i~~~i~~~l~~lH 142 (317)
T cd06635 102 LVMEYCLGSASDLLEVH---------------------------------------KKPLQEVEIAAITHGALQGLAYLH 142 (317)
T ss_pred EEEeCCCCCHHHHHHHh---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999887766654211 234577888999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++|+||||||+||+++.++ .+||+|||++....... ..
T Consensus 143 ~~~i~H~dL~p~Nil~~~~~--~~kl~dfg~~~~~~~~~---------------------------------------~~ 181 (317)
T cd06635 143 SHNMIHRDIKAGNILLTEPG--QVKLADFGSASIASPAN---------------------------------------SF 181 (317)
T ss_pred HCCcccCCCCcccEEECCCC--CEEEecCCCccccCCcc---------------------------------------cc
Confidence 99999999999999997655 49999999986543211 13
Q ss_pred CCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc-cccccCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK-DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~-~~~~~~~~~e~~dLI~~~L 778 (934)
.|++.|+|||++. .+.++.++|||||||++|+|++|..+++....... ..+..... .......++.+++||.+||
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 261 (317)
T cd06635 182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCL 261 (317)
T ss_pred cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHc
Confidence 5888999999984 45689999999999999999997544444332222 22222222 2222345678999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCccch
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
+.+|.+||++.++++|||+.....+
T Consensus 262 ~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 262 QKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred cCCcccCcCHHHHHhChhhhccCcc
Confidence 9999999999999999999665544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=314.58 Aligned_cols=242 Identities=30% Similarity=0.479 Sum_probs=184.9
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||.||++.. .+|+.||||++.+... .....|...+....+||||+++++++..++..|+|||||.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~- 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN- 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC-
Confidence 4699999999999854 5689999999865431 1123343445566789999999999999999999999554
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++.. ...+++.++..++.||+.||.|||+.+|+|||
T Consensus 81 ---------~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d 122 (260)
T cd05611 81 ---------GGDCASLIKT-----------------------------LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD 122 (260)
T ss_pred ---------CCCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 4455444421 23467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|+|+|||++.++ .+||+|||+++...... ...|+..|+|
T Consensus 123 l~p~nil~~~~~--~~~l~dfg~~~~~~~~~---------------------------------------~~~~~~~y~~ 161 (260)
T cd05611 123 IKPENLLIDQTG--HLKLTDFGLSRNGLENK---------------------------------------KFVGTPDYLA 161 (260)
T ss_pred CCHHHeEECCCC--cEEEeecccceeccccc---------------------------------------cCCCCcCccC
Confidence 999999997655 49999999987543210 1357889999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc----cccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK----DLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~----~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
||.+.+..++.++|||||||++|+|++| .+||....... ........ .......++++.++|.+||+.||++||
T Consensus 162 pe~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 240 (260)
T cd05611 162 PETILGVGDDKMSDWWSLGCVIFEFLFG-YPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRL 240 (260)
T ss_pred hhhhcCCCCcchhhhHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHcc
Confidence 9999988899999999999999999996 67775543222 22111111 111223568999999999999999999
Q ss_pred CH---HHHHcCCCCCCcc
Q 002343 787 KA---QNVLNHPFFWTAD 801 (934)
Q Consensus 787 Ta---~evL~HPff~~~~ 801 (934)
++ +|+++||||.+.+
T Consensus 241 ~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 241 GANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCCcHHHHHcChHhhcCC
Confidence 55 7999999997654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=319.56 Aligned_cols=259 Identities=25% Similarity=0.357 Sum_probs=190.2
Q ss_pred eEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.|.+.+.||+|+||.||++... +++.||||.+..... +...+|++ +++.++||||+++++++......|
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAE-LLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHH-HHHhcCCCCchheeeEEecCCCeE
Confidence 4667789999999999998653 347899999875433 23455655 788899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+||||+. +|+|.+++........... ........+++.++..++.||+.||+|||
T Consensus 85 lv~e~~~----------~~~L~~~i~~~~~~~~~~~---------------~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 139 (280)
T cd05049 85 MVFEYME----------HGDLNKFLRSHGPDAAFLK---------------SPDSPMGELTLSQLLQIAVQIASGMVYLA 139 (280)
T ss_pred EEEecCC----------CCCHHHHHHhcCCchhhhc---------------ccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 9999554 4455555443211100000 00001345678899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++.+......... ...
T Consensus 140 ~~~i~h~dlkp~nili~~~~--~~kl~d~g~~~~~~~~~~~~~~---------------------------------~~~ 184 (280)
T cd05049 140 SQHFVHRDLATRNCLVGYDL--VVKIGDFGMSRDVYTTDYYRVG---------------------------------GHT 184 (280)
T ss_pred hCCeeccccccceEEEcCCC--eEEECCcccceecccCcceecC---------------------------------CCC
Confidence 99999999999999997665 5999999999865432211100 013
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHh-hcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.+++.|+|||++.+..++.++|||||||++|||++.+..||.. ........+. ......+...+.++.+|+.+||+.|
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 264 (280)
T cd05049 185 MLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRD 264 (280)
T ss_pred cccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 4678899999999999999999999999999999844666644 3333332222 2222233445689999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||++.|+++
T Consensus 265 p~~Rp~~~eil~ 276 (280)
T cd05049 265 PQQRINIKDIHE 276 (280)
T ss_pred cccCCCHHHHHH
Confidence 999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=319.64 Aligned_cols=237 Identities=22% Similarity=0.260 Sum_probs=177.7
Q ss_pred eecccCcEEEEEEEEec-------------------------CcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEE
Q 002343 480 EIAKGSNGTVVLEGNYE-------------------------GRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRW 532 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~~-------------------------g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l 532 (934)
.||+|+||.||++.... ...||+|++.....+ ..+.++..+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999874321 235999998654332 234444568899999999999
Q ss_pred EEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHH
Q 002343 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (934)
Q Consensus 533 ~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 612 (934)
++++.++...|+|||||++ |+|..++... ...+++..+..++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~----------g~L~~~l~~~----------------------------~~~~~~~~~~~i~ 123 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEH----------GPLDVCLRKE----------------------------KGRVPVAWKITVA 123 (274)
T ss_pred EEEEEeCCceEEEEecCCC----------CcHHHHHHhc----------------------------CCCCCHHHHHHHH
Confidence 9999999999999996654 4444443221 2346778889999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCeEEEecCC-----CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhh
Q 002343 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDK-----SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLV 687 (934)
Q Consensus 613 ~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~-----~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (934)
.||+.||+|||+++|+||||||+|||++.++ ...+|++|||++.......
T Consensus 124 ~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------------------------- 178 (274)
T cd05076 124 QQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE------------------------- 178 (274)
T ss_pred HHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc-------------------------
Confidence 9999999999999999999999999997543 2248999999876432211
Q ss_pred hhccccccccceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhhcccccccC
Q 002343 688 ICECVFQFGVLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKDRKDLFLVE 765 (934)
Q Consensus 688 ~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~~~~~~~~~ 765 (934)
...|+..|+|||.+.+ ..++.++|||||||++||+++++.+||........ ..... ....+..
T Consensus 179 --------------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 243 (274)
T cd05076 179 --------------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK-KHRLPEP 243 (274)
T ss_pred --------------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh-ccCCCCC
Confidence 0347788999999876 46799999999999999997656888865433222 22222 2222333
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
..+++.++|.+||+.+|++|||+.+++++
T Consensus 244 ~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 244 SCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 45789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=319.01 Aligned_cols=249 Identities=27% Similarity=0.436 Sum_probs=189.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.|...+.||+|++|.||++.. .+++.||+|++..... +...+|+. ++..++||||+++++++...+..|+++|++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~-~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVV-IMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHH-HHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 344457899999999999854 5788999998864332 23455665 778889999999999999999999999955
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. +++|.+++. ...+++.++..++.|++.||+|||++||+|
T Consensus 99 ~----------~~~L~~~~~------------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H 138 (285)
T cd06648 99 E----------GGALTDIVT------------------------------HTRMNEEQIATVCLAVLKALSFLHAQGVIH 138 (285)
T ss_pred C----------CCCHHHHHH------------------------------hCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4 444444332 123567788999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+||+++.++ .++|+|||++.......... ....|++.|
T Consensus 139 ~dl~p~Nil~~~~~--~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~y 181 (285)
T cd06648 139 RDIKSDSILLTSDG--RVKLSDFGFCAQVSKEVPRR-----------------------------------KSLVGTPYW 181 (285)
T ss_pred CCCChhhEEEcCCC--cEEEcccccchhhccCCccc-----------------------------------ccccCCccc
Confidence 99999999997665 48999999887654321110 013589999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhccccc---ccCCCHHHHHHHHHcccCCCCCC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLF---LVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~---~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+|||++.+..++.++|||||||++|+|++| .+||.. ........+....... ....+.++.+||.+||+.||++|
T Consensus 182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (285)
T cd06648 182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDG-EPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR 260 (285)
T ss_pred cCHHHhcCCCCCCcccHHHHHHHHHHHHhC-CCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhC
Confidence 999999988899999999999999999996 555543 3222222222221111 12245789999999999999999
Q ss_pred cCHHHHHcCCCCCCcc
Q 002343 786 PKAQNVLNHPFFWTAD 801 (934)
Q Consensus 786 PTa~evL~HPff~~~~ 801 (934)
|++.++++||||....
T Consensus 261 pt~~~il~~~~~~~~~ 276 (285)
T cd06648 261 ATAAELLNHPFLAKAG 276 (285)
T ss_pred cCHHHHccCcccccCC
Confidence 9999999999996543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=337.04 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=199.7
Q ss_pred cceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChh-----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
-..|.+.+.||+|.|++|.++ ...+|..||||.+.+...+ ...+|++ +|..++|||||+++.+.+....+|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~-imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVD-IMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHH-HHHhcCCcceeeeeeeeeecceeEEE
Confidence 356888999999999999998 4567999999999877643 3467776 78899999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||| ..+|.++++|.... ...+..++.++.|+++|++|||++
T Consensus 134 ~ey----------a~~ge~~~yl~~~g-----------------------------r~~e~~ar~~F~q~vsaveYcH~k 174 (596)
T KOG0586|consen 134 MEY----------ASGGELFDYLVKHG-----------------------------RMKEKEARAKFRQIVSAVEYCHSK 174 (596)
T ss_pred EEe----------ccCchhHHHHHhcc-----------------------------cchhhhhhhhhHHHHHHHHHHhhc
Confidence 995 45566666665422 223456788999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|||||||++||||+.+ +.+||+|||++..+...... .+.||
T Consensus 175 ~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~~~~l------------------------------------qt~cg 216 (596)
T KOG0586|consen 175 NIVHRDLKAENILLDEN--MNIKIADFGFSTFFDYGLML------------------------------------QTFCG 216 (596)
T ss_pred ceeccccchhhcccccc--cceeeeccccceeecccccc------------------------------------cccCC
Confidence 99999999999999554 45999999999987754321 12789
Q ss_pred CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
++.|.|||+..+..| ++.+|+||+|+++|-|+.| ..||....-... .-+.......+.-.+.++.+||+++|..+|.
T Consensus 217 sppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~G-sLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Ps 295 (596)
T KOG0586|consen 217 SPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEG-SLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPS 295 (596)
T ss_pred CCCccChHhhcCcccCCcceehhhhhhhheeeeec-ccccCCcccccccchheeeeecccceeechhHHHHHHhhccCcc
Confidence 999999999999888 7899999999999999996 778765432211 1111112222233456899999999999999
Q ss_pred CCcCHHHHHcCCCCCCcc
Q 002343 784 LRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~ 801 (934)
+|+++++++.|+|.....
T Consensus 296 kr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 296 KRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred ccCCHHHhhhhcccchhh
Confidence 999999999999985543
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=313.45 Aligned_cols=248 Identities=27% Similarity=0.463 Sum_probs=190.7
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecC-----ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|+||.||++.. .+|..||+|.+... ..+...+|++ +++.++||||+++++.+.+.+..|+|+||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVI-LLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHH-HHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 66788999999999999854 56899999998643 1233445665 78889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +++|.+++... ....+++..++.++.|++.||+|||+.+|+
T Consensus 81 ~~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (257)
T cd08225 81 CD----------GGDLMKRINRQ---------------------------RGVLFSEDQILSWFVQISLGLKHIHDRKIL 123 (257)
T ss_pred CC----------CCcHHHHHHhc---------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 64 34444443211 012357788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++. .+||+|||.+..+....... ....|++.
T Consensus 124 H~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 167 (257)
T cd08225 124 HRDIKSQNIFLSKNGM-VAKLGDFGIARQLNDSMELA-----------------------------------YTCVGTPY 167 (257)
T ss_pred cccCCHHHEEEcCCCC-eEEecccccchhccCCcccc-----------------------------------cccCCCcc
Confidence 9999999999976643 57999999998764322110 01358899
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|+|||||++|+|++| ..||.... .... .+............+.++.++|.+||..+|++||
T Consensus 168 ~~ape~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 246 (257)
T cd08225 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTL-KHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRP 246 (257)
T ss_pred ccCHHHHcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCc
Confidence 9999999888899999999999999999996 56665432 2222 2222222222334567899999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
|+.++++||||
T Consensus 247 t~~~ll~~~~~ 257 (257)
T cd08225 247 SITSILKRPFL 257 (257)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=326.49 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=188.5
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
|.....||+|+||.||++.. .++..||||++..... +...+|+. .+..++||||+++++.+...+..|+|||||.
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV-IMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHH-HHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 33346799999999999854 5688999999864332 23455665 6788899999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+ ++|.+++. ...+++.++..++.||+.||+|||+++|+||
T Consensus 103 ~----------~~L~~~~~------------------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 142 (292)
T cd06658 103 G----------GALTDIVT------------------------------HTRMNEEQIATVCLSVLRALSYLHNQGVIHR 142 (292)
T ss_pred C----------CcHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 4 34433321 1235677889999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ .++|+|||++.......... ....|+..|+
T Consensus 143 dlkp~Nill~~~~--~~kL~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~ 185 (292)
T cd06658 143 DIKSDSILLTSDG--RIKLSDFGFCAQVSKEVPKR-----------------------------------KSLVGTPYWM 185 (292)
T ss_pred CCCHHHEEEcCCC--CEEEccCcchhhcccccccC-----------------------------------ceeecCcccc
Confidence 9999999997665 49999999987654321110 0135889999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhc-ccc--cccCCCHHHHHHHHHcccCCCCCCc
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDR-KDL--FLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~-~~~--~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|||++.+..++.++|||||||++|||++| ..||.. ........+... ... .....+.++.+++.+||..||++||
T Consensus 186 aPE~~~~~~~~~~~Dv~slGvil~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 264 (292)
T cd06658 186 APEVISRLPYGTEVDIWSLGIMVIEMIDG-EPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRA 264 (292)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCc
Confidence 99999988899999999999999999996 556543 322222222221 111 1123467899999999999999999
Q ss_pred CHHHHHcCCCCCCcc
Q 002343 787 KAQNVLNHPFFWTAD 801 (934)
Q Consensus 787 Ta~evL~HPff~~~~ 801 (934)
|++++++||||....
T Consensus 265 t~~~il~~~~~~~~~ 279 (292)
T cd06658 265 TAQELLQHPFLKLAG 279 (292)
T ss_pred CHHHHhhChhhhccC
Confidence 999999999996543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=321.50 Aligned_cols=246 Identities=26% Similarity=0.419 Sum_probs=186.0
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++... +++.||+|++.+... +...+|+. +++.++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIR-MLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHH-HHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 4778899999999999998654 589999998864332 23445655 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+++ +..+.. ...++++.+++.++.||+.||+|||+.+|
T Consensus 81 ~~~~~~----------l~~~~~-----------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (286)
T cd07846 81 FVDHTV----------LDDLEK-----------------------------YPNGLDESRVRKYLFQILRGIEFCHSHNI 121 (286)
T ss_pred cCCccH----------HHHHHh-----------------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 776532 222211 02346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .++|+|||++..+....... +...|+.
T Consensus 122 ~h~~l~p~ni~~~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~ 164 (286)
T cd07846 122 IHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVY-----------------------------------TDYVATR 164 (286)
T ss_pred cccCCCHHHEEECCCC--cEEEEeeeeeeeccCCcccc-----------------------------------Cccccee
Confidence 9999999999997665 48999999998764432110 1135788
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhccc------------------------
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKD------------------------ 760 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~------------------------ 760 (934)
.|+|||++.+. .++.++|||||||++|||++| .+||..... ....+......
T Consensus 165 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T cd07846 165 WYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVK 243 (286)
T ss_pred eccCcHHhccccccCchHhHHHHHHHHHHHHcC-CCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccccccc
Confidence 99999998753 468899999999999999997 566643221 11111100000
Q ss_pred ------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
...+..+..+.+|+.+||+.||++||++.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 244 EIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0012345689999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=313.53 Aligned_cols=247 Identities=23% Similarity=0.313 Sum_probs=190.1
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||.||++....++.||||.+..... ....+|+. +++.++||||+++++++...+..|++||+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQ-IMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHH-HHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 356888899999999999998766778999999865432 34556665 778889999999999999999999999966
Q ss_pred c-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 550 ~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
. ++|.+++ .... ...+++.++..++.|++.||.|||++||+
T Consensus 84 ~~~~L~~~~-----------~~~~---------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 84 KYGSLLEYL-----------QGGA---------------------------GRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred cCCcHHHHH-----------hccC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3 3444443 2110 12457788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++. +||+|||+++.+........ . ...++..
T Consensus 126 H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~~---~-------------------------------~~~~~~~ 169 (261)
T cd05068 126 HRDLAARNVLVGENNI--CKVADFGLARVIKEDIYEAR---E-------------------------------GAKFPIK 169 (261)
T ss_pred eccCCcceEEEcCCCC--EEECCcceEEEccCCccccc---C-------------------------------CCcCcee
Confidence 9999999999976654 89999999987753211100 0 0123457
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|||++++.+||..... .....+... ....+...+..+.+++.+||+.||++||
T Consensus 170 y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 249 (261)
T cd05068 170 WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRP 249 (261)
T ss_pred ccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCC
Confidence 99999999889999999999999999999966888865433 222222222 2222344568899999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
+++++++
T Consensus 250 ~~~~l~~ 256 (261)
T cd05068 250 TFETLQW 256 (261)
T ss_pred CHHHHHH
Confidence 9999874
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=321.66 Aligned_cols=261 Identities=21% Similarity=0.333 Sum_probs=189.6
Q ss_pred EEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
|.+.+.||+|+||+||++... .++.||||++...... ..+.++..++..++||||+++++++.+.+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 455788999999999998543 2578999998754322 2233333478889999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
+|+|.+ +|.+++.+.... ... ..... .......+++..++.++.|++.||+|||+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~-----------~~~------------~~~~~-~~~~~~~~~~~~~~~~~~ql~~aL~~lH~ 142 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPH-----------SDV------------GSTDD-DKTVKSTLEPADFVHIVTQIAAGMEFLSS 142 (283)
T ss_pred EEcCCCCcHHHHHHhcCCC-----------ccc------------ccccc-ccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 997653 455554321100 000 00000 00012347788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++.+........ .....
T Consensus 143 ~gi~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------------~~~~~ 187 (283)
T cd05091 143 HHVVHKDLATRNVLVFDKL--NVKISDLGLFREVYAADYYKL---------------------------------MGNSL 187 (283)
T ss_pred cCccccccchhheEecCCC--ceEecccccccccccchheee---------------------------------ccCcc
Confidence 9999999999999997655 489999999987643221100 01134
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-cccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+++.|+|||++.++.++.++|||||||++|||++++.+||..... .....+.... ...+...+.++.+|+.+||+.+|
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p 267 (283)
T cd05091 188 LPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFP 267 (283)
T ss_pred CCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCc
Confidence 678999999999889999999999999999999977888765433 2233332222 22344567789999999999999
Q ss_pred CCCcCHHHHHcC
Q 002343 783 DLRPKAQNVLNH 794 (934)
Q Consensus 783 ~~RPTa~evL~H 794 (934)
++||++.+|++.
T Consensus 268 ~~RP~~~~i~~~ 279 (283)
T cd05091 268 SRRPRFKDIHSR 279 (283)
T ss_pred ccCCCHHHHHHH
Confidence 999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=325.74 Aligned_cols=247 Identities=26% Similarity=0.428 Sum_probs=188.8
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
|.....||+|+||.||++.. .+++.||||++.... .+...+|+. ++..++||||+++++++..++..|++||+|+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~-~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVV-IMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHH-HHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 33345799999999999854 578999999986432 234455655 6778899999999999999999999999655
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+++|.+++. ...+++.+++.++.|++.||+|||++||+||
T Consensus 102 ----------~~~L~~~~~------------------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~ 141 (297)
T cd06659 102 ----------GGALTDIVS------------------------------QTRLNEEQIATVCESVLQALCYLHSQGVIHR 141 (297)
T ss_pred ----------CCCHHHHHh------------------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 344433321 2345778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ ++||+|||+++.+....... ....|+..|+
T Consensus 142 dl~p~Nill~~~~--~~kL~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~ 184 (297)
T cd06659 142 DIKSDSILLTLDG--RVKLSDFGFCAQISKDVPKR-----------------------------------KSLVGTPYWM 184 (297)
T ss_pred CCCHHHeEEccCC--cEEEeechhHhhcccccccc-----------------------------------cceecCcccc
Confidence 9999999997665 49999999997654322110 0145899999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhccc---ccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~---~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|||++.+..++.++|||||||++|||++| ..||. .........+..... ......++++.++|.+||+.+|++||
T Consensus 185 aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp 263 (297)
T cd06659 185 APEVISRTPYGTEVDIWSLGIMVIEMVDG-EPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERA 263 (297)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCc
Confidence 99999988899999999999999999997 55554 332222222222111 11223467899999999999999999
Q ss_pred CHHHHHcCCCCCCc
Q 002343 787 KAQNVLNHPFFWTA 800 (934)
Q Consensus 787 Ta~evL~HPff~~~ 800 (934)
+++++++||||...
T Consensus 264 s~~~ll~~~~~~~~ 277 (297)
T cd06659 264 TAQELLDHPFLLQT 277 (297)
T ss_pred CHHHHhhChhhccC
Confidence 99999999999644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=316.79 Aligned_cols=260 Identities=26% Similarity=0.367 Sum_probs=196.7
Q ss_pred eEEEeeeecccCcEEEEEEEEec-----CcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEec-CCeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD-QDFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~-----g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~ 542 (934)
.|.....||+|.||.||+|...+ .+.+|||.+.... ...+.+|+. +++.++|||||.+..++.. +..+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREia-L~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIA-LLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHH-HHHHhcCCcchhHHHHHhccCceE
Confidence 46677899999999999983322 2379999997552 356889997 8899999999999999877 7889
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
||++||.+-+|...|.....+ +...+|...++.|+.||+.|+.||
T Consensus 104 ~l~fdYAEhDL~~II~fHr~~-----------------------------------~~~~lp~~mvKsilwQil~Gv~YL 148 (438)
T KOG0666|consen 104 WLLFDYAEHDLWHIIKFHRAS-----------------------------------KAKQLPRSMVKSILWQILDGVHYL 148 (438)
T ss_pred EEEehhhhhhHHHHHHHhccc-----------------------------------hhccCCHHHHHHHHHHHHhhhHHH
Confidence 999999998888887543221 123467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 623 HEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|++=|+||||||.|||+..++ ..+|||+|||+|+.+...-......
T Consensus 149 H~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~-------------------------------- 196 (438)
T KOG0666|consen 149 HSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASL-------------------------------- 196 (438)
T ss_pred hhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccC--------------------------------
Confidence 999999999999999997662 3579999999999887543322110
Q ss_pred ecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCc-------------hhHHHHHHhh---------
Q 002343 701 TVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGES-------------FERDANIVKD--------- 757 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~-------------~~~~~~i~~~--------- 757 (934)
..++-|..|+|||.+.+.+ ||+++|||+.|||+.||+|-...+++.. ..+..+++..
T Consensus 197 d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~l 276 (438)
T KOG0666|consen 197 DPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDL 276 (438)
T ss_pred CceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhh
Confidence 1145688999999999864 7999999999999999999644333321 1122221110
Q ss_pred ------------cccccc------------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 758 ------------RKDLFL------------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 758 ------------~~~~~~------------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
...... ...++.+.+|+.+||+.||.+|.|+++.|+|+||...+
T Consensus 277 kk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 277 KKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred hhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 000000 01234588999999999999999999999999997654
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=313.96 Aligned_cols=248 Identities=26% Similarity=0.384 Sum_probs=188.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++... +...||||.+...... ...+|+. +++.++||||+++++++.+.+..|+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEAS-IMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHH-HHHhCCCCCcceEeEEEecCCceEE
Confidence 34778899999999999998553 2458999998654332 2345655 7788899999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
+||+|. +|+|.+++... ...+++.+++.++.|++.||+|||+
T Consensus 83 v~e~~~----------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~l~~~l~~Lh~ 124 (266)
T cd05033 83 ITEYME----------NGSLDKFLREN----------------------------DGKFTVGQLVGMLRGIASGMKYLSE 124 (266)
T ss_pred EEEcCC----------CCCHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999554 44454444321 1245778899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|+||||||+|||++.++ .++|+|||+++.+.......... ...
T Consensus 125 ~~i~H~di~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~---------------------------------~~~ 169 (266)
T cd05033 125 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRRLEDSEATYTTK---------------------------------GGK 169 (266)
T ss_pred CCcccCCCCcceEEEcCCC--CEEECccchhhcccccccceecc---------------------------------CCC
Confidence 9999999999999997655 48999999999875222111100 123
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||.+.+..++.++|||||||++|+|++.|..||.+... .....+... ....+...++++.+|+.+||+.+|
T Consensus 170 ~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 249 (266)
T cd05033 170 IPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDR 249 (266)
T ss_pred CCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 567899999999889999999999999999999855777755432 222222221 222234457899999999999999
Q ss_pred CCCcCHHHHHcC
Q 002343 783 DLRPKAQNVLNH 794 (934)
Q Consensus 783 ~~RPTa~evL~H 794 (934)
++||++.+++++
T Consensus 250 ~~Rp~~~ei~~~ 261 (266)
T cd05033 250 NERPTFSQIVST 261 (266)
T ss_pred ccCcCHHHHHHH
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=322.26 Aligned_cols=249 Identities=27% Similarity=0.382 Sum_probs=187.4
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh--------HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD--------VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~--------~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
|.+.+.||+|+||.||++.. .+|+.||||++...... ....|+. +++.++|+||+++++++.+.+..|+|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIK-LLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHH-HHhhcCCCCChhhhheeecCCEEEEE
Confidence 66778899999999999854 46899999998654321 2345555 77888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||++.++|.+++ ... ...+++..++.++.||+.||+|||++
T Consensus 81 ~e~~~~~L~~~i-----------~~~----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~ 121 (298)
T cd07841 81 FEFMETDLEKVI-----------KDK----------------------------SIVLTPADIKSYMLMTLRGLEYLHSN 121 (298)
T ss_pred EcccCCCHHHHH-----------hcc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 996644444433 211 11467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++......... ....+
T Consensus 122 ~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~ 164 (298)
T cd07841 122 WILHRDLKPNNLLIASDG--VLKLADFGLARSFGSPNRKM-----------------------------------THQVV 164 (298)
T ss_pred CeeecCCChhhEEEcCCC--CEEEccceeeeeccCCCccc-----------------------------------ccccc
Confidence 999999999999997665 49999999998765432110 01246
Q ss_pred CCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhc-----------------------c
Q 002343 706 SSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDR-----------------------K 759 (934)
Q Consensus 706 T~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~-----------------------~ 759 (934)
++.|+|||.+.+ ..++.++|||||||++|||++| .+||...... ...+.... .
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
T cd07841 165 TRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFP 243 (298)
T ss_pred ceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC-CccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccC
Confidence 788999999865 4578999999999999999997 6666433211 11111000 0
Q ss_pred c----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 760 D----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 760 ~----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
. ......+.++.+||.+||+.||++|||+.|+++||||.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 244 PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 0 00112346889999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=288.86 Aligned_cols=245 Identities=27% Similarity=0.434 Sum_probs=194.1
Q ss_pred eeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
-++||+|.||+|++++.+ +++.||+|++.-... ..+++||. +++.+.|.|||+++++...++.+.+|+|+|..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreic-llkelkhknivrl~dvlhsdkkltlvfe~cdq 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHH-HHHHhhhcceeehhhhhccCceeEEeHHHhhH
Confidence 457999999999998654 588999999875443 46899997 88999999999999999999999999999998
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
.|..+....+|. +..+.++.++.|+++||.++|++++.|||
T Consensus 86 dlkkyfdslng~---------------------------------------~d~~~~rsfmlqllrgl~fchshnvlhrd 126 (292)
T KOG0662|consen 86 DLKKYFDSLNGD---------------------------------------LDPEIVRSFMLQLLRGLGFCHSHNVLHRD 126 (292)
T ss_pred HHHHHHHhcCCc---------------------------------------CCHHHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 887776554443 34566789999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|+||+.++. .|++|||+|+.+.-...+.+ ..+-|..|.+
T Consensus 127 lkpqnllin~nge--lkladfglarafgipvrcys-----------------------------------aevvtlwyrp 169 (292)
T KOG0662|consen 127 LKPQNLLINRNGE--LKLADFGLARAFGIPVRCYS-----------------------------------AEVVTLWYRP 169 (292)
T ss_pred CCcceEEeccCCc--EEecccchhhhcCCceEeee-----------------------------------ceeeeeeccC
Confidence 9999999977775 89999999997654433222 2456889999
Q ss_pred chhcccCC-CcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhc---c----------------ccccc-----
Q 002343 712 PEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDR---K----------------DLFLV----- 764 (934)
Q Consensus 712 PE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~---~----------------~~~~~----- 764 (934)
|.++.+.+ |+...|+||.|||+.|+...|.|-|.... ++...+.... . +.++.
T Consensus 170 pdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws 249 (292)
T KOG0662|consen 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS 249 (292)
T ss_pred cceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH
Confidence 99998865 79999999999999999988887775432 2222222110 0 00000
Q ss_pred ----CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 765 ----EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 765 ----~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.....-+||++++|.-+|.+|.+|++.++||||.+
T Consensus 250 qivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 250 QIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred HHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 11124579999999999999999999999999965
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=311.14 Aligned_cols=244 Identities=23% Similarity=0.391 Sum_probs=187.2
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
|.+.+.||+|+||.||++.. .+++.||+|.+..... +...+|+. +++.++||||+++++++.+++.+|++||||
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAV-LLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 66788999999999999844 5689999998854322 23445554 778899999999999999999999999965
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
+ +|+|.+++... +...+++..++.++.||+.||.|||++||+|
T Consensus 81 ~----------~~~l~~~~~~~---------------------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 123 (255)
T cd08219 81 D----------GGDLMQKIKLQ---------------------------RGKLFPEDTILQWFVQMCLGVQHIHEKRVLH 123 (255)
T ss_pred C----------CCcHHHHHHhc---------------------------cCCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 5 34444433211 1234577889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
+||||+|||++.++ .++|+|||+++.+....... ....|++.|
T Consensus 124 ~dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~~ 166 (255)
T cd08219 124 RDIKSKNIFLTQNG--KVKLGDFGSARLLTSPGAYA-----------------------------------CTYVGTPYY 166 (255)
T ss_pred CCCCcceEEECCCC--cEEEcccCcceeeccccccc-----------------------------------ccccCCccc
Confidence 99999999997665 48999999997654321110 113588999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|+|++| .+||.... .... .+........+...+.++.+||.+||+.||++||+
T Consensus 167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 245 (255)
T cd08219 167 VPPEIWENMPYNNKSDIWSLGCILYELCTL-KHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPS 245 (255)
T ss_pred cCHHHHccCCcCchhhhhhhchhheehhhc-cCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCC
Confidence 999999988899999999999999999996 66665433 2222 22222222233445678999999999999999999
Q ss_pred HHHHHcC
Q 002343 788 AQNVLNH 794 (934)
Q Consensus 788 a~evL~H 794 (934)
+.+++.-
T Consensus 246 ~~~il~~ 252 (255)
T cd08219 246 ATTILSR 252 (255)
T ss_pred HHHHhhc
Confidence 9999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.38 Aligned_cols=248 Identities=29% Similarity=0.452 Sum_probs=186.8
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-------------hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-------------DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-------------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
+|...+.||.|+||+||++.. .+|+.||||.+..... +...+|+. +++.++||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIE-TLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHH-HHHhcCCCCcceEEEEeccC
Confidence 366788999999999999854 5689999998753210 12234554 77889999999999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+..++||||+ .+|+|.+++.. ...+++..++.++.||+.||
T Consensus 81 ~~~~lv~e~~----------~~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 81 EYLSIFLEYV----------PGGSIGSCLRT-----------------------------YGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred CceEEEEecC----------CCCcHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHH
Confidence 9999999955 44555554432 23457778889999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
.|||+++++||||||+||+++.++ .++|+|||+++..........
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~~~--------------------------------- 166 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADG--ICKISDFGISKKSDDIYDNDQ--------------------------------- 166 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCC--eEEEeeccccccccccccccc---------------------------------
Confidence 999999999999999999997655 599999999976543211100
Q ss_pred eecCCCCCccccchhcccCC--CcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhc-cccc----ccCCCHHH
Q 002343 700 FTVGYGSSGWQAPEQLLQGR--QTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDR-KDLF----LVEHIPEA 770 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~-~~~~----~~~~~~e~ 770 (934)
.....|+..|+|||++.... ++.++|+|||||++|++++| ..||....... ..+.... .... ....+.++
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T cd06629 167 NMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG-RRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVA 245 (272)
T ss_pred cccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC-CCCCcCcchHHHHHHhhccccCCcCCccccccCCHHH
Confidence 01135889999999987655 78999999999999999996 66775432221 1111111 1111 12346789
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.++|.+||..||++||+++++++||||
T Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 246 LDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=329.62 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=190.6
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec----CC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----QD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~ 540 (934)
++..|.+.+.||+|+||.||++. ..+|+.||+|++..... ....+|+. +++.++||||+++++++.. ..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELK-ILRHFKHDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHH-HHHhcCCCCccCHHHhccccCCCCc
Confidence 45678888999999999999985 45699999999865421 23456665 7888899999999998763 45
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|+|||||.++|.+++. . ...+++..++.++.||+.||+
T Consensus 82 ~~~lv~e~~~~~l~~~~~-----------~-----------------------------~~~~~~~~~~~i~~qi~~aL~ 121 (334)
T cd07855 82 DVYVVMDLMESDLHHIIH-----------S-----------------------------DQPLTEEHIRYFLYQLLRGLK 121 (334)
T ss_pred eEEEEEehhhhhHHHHhc-----------c-----------------------------CCCCCHHHHHHHHHHHHHHHH
Confidence 799999977665544431 1 234678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+++|+||||||+|||++.++ .+||+|||+++........... ..
T Consensus 122 ~LH~~~ivH~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~-------------------------------~~ 168 (334)
T cd07855 122 YIHSANVIHRDLKPSNLLVNEDC--ELRIGDFGMARGLSSSPTEHKY-------------------------------FM 168 (334)
T ss_pred HHHHCCeecCCCCHHHEEEcCCC--cEEecccccceeecccCcCCCc-------------------------------cc
Confidence 99999999999999999997665 4899999999865443211100 01
Q ss_pred ecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH------------------------H
Q 002343 701 TVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN------------------------I 754 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~------------------------i 754 (934)
+...|+..|+|||++.+ ..++.++|||||||++|||++| .+||..... .... .
T Consensus 169 ~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g-~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 247 (334)
T cd07855 169 TEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGR-RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKY 247 (334)
T ss_pred ccccccccccChHHhcCCcccccccchHHHHHHHHHHHcC-CCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHH
Confidence 12468999999999866 4579999999999999999996 667744211 1000 0
Q ss_pred Hhhcc---cc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 755 VKDRK---DL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 755 ~~~~~---~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
..... .. .....++++.++|.+||+.||.+||++++++.||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 248 IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 00000 00 012346789999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=317.36 Aligned_cols=264 Identities=23% Similarity=0.344 Sum_probs=191.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-----ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-----~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.|.+.+.||+|+||+||++.. ..++.||+|.+..... ....+|+. +++.++||||+++++++..++..|+
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEAS-LMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHH-HHhhCCCCCeeeEEEEEecCCceEE
Confidence 366778999999999999753 3467899999875332 23345654 7888999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||+. +|+|.+++......... ....+........+++.+++.++.|++.||+|||+
T Consensus 85 v~e~~~----------~~~L~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 142 (283)
T cd05090 85 LFEYLN----------QGDLHEFLIMRSPHSDV------------GCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS 142 (283)
T ss_pred EEEcCC----------CCcHHHHHHhcCCCCcc------------ccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence 999665 34444443221100000 00000000012346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|+||||||+|||++.++ .+||+|||+++.+......... ....
T Consensus 143 ~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~---------------------------------~~~~ 187 (283)
T cd05090 143 HFFVHKDLAARNILIGEQL--HVKISDLGLSREIYSADYYRVQ---------------------------------PKSL 187 (283)
T ss_pred cCeehhccccceEEEcCCC--cEEeccccccccccCCcceecc---------------------------------cCCC
Confidence 9999999999999997654 4899999999876443211110 1134
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccc-cccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDL-FLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~-~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||++.+..++.++|||||||++|||++++.+||... .......+...... .+...++++.+++.+||+.||
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 267 (283)
T cd05090 188 LPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGP 267 (283)
T ss_pred ccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence 6778999999998889999999999999999999667777543 33333333333222 233456899999999999999
Q ss_pred CCCcCHHHHHcCC
Q 002343 783 DLRPKAQNVLNHP 795 (934)
Q Consensus 783 ~~RPTa~evL~HP 795 (934)
++||++.+++++-
T Consensus 268 ~~Rp~~~~i~~~l 280 (283)
T cd05090 268 SRRPRFKDIHTRL 280 (283)
T ss_pred ccCcCHHHHHHHh
Confidence 9999999998763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=318.62 Aligned_cols=239 Identities=22% Similarity=0.306 Sum_probs=180.3
Q ss_pred eeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 479 KEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.||+|+||+||++... ....||+|.+..... ...+.++..+++.++|||||++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36999999999997432 234599998865432 12334444588889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.+++... ...+++..++.++.||+.||+|||++||+
T Consensus 81 ~~----------~g~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 122 (258)
T cd05078 81 VK----------FGSLDTYLKKN----------------------------KNLINISWKLEVAKQLAWALHFLEDKGLT 122 (258)
T ss_pred CC----------CCcHHHHHhcC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 65 44454444321 12356778889999999999999999999
Q ss_pred ccCCCCCeEEEecCCCc------eEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 629 HRDLKPQNVLISKDKSF------CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~------~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||||||+|||++.++.. .++++|||++....... .
T Consensus 123 H~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~---------------------------------------~ 163 (258)
T cd05078 123 HGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE---------------------------------------I 163 (258)
T ss_pred cCCCccceEEEecccccccCCCceEEecccccccccCCch---------------------------------------h
Confidence 99999999999766532 37999999886543210 1
Q ss_pred CCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
..|+..|+|||++.+. .++.++|||||||++|||++|+.+|+..................+.....++.+||.+||+.|
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 243 (258)
T cd05078 164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYE 243 (258)
T ss_pred ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccC
Confidence 3478899999999874 579999999999999999998778876544333222222222333345578999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||++++++.
T Consensus 244 p~~Rps~~~il~~ 256 (258)
T cd05078 244 PDFRPSFRAIIRD 256 (258)
T ss_pred hhhCCCHHHHHHh
Confidence 9999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=318.70 Aligned_cols=261 Identities=24% Similarity=0.343 Sum_probs=190.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.+.+.++||+|+||+||++.. .++..||+|.+..... ....+|+. +++.++||||+++++++.+.+..|
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE-LLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHH-HHhcCCCCCCceEEEEEecCCceE
Confidence 3467788999999999998743 2466899998865432 23455555 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
++||++. +|+|.+++.......... ..........+++..++.++.||+.||+|||
T Consensus 84 lv~e~~~----------~~~L~~~i~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 139 (280)
T cd05092 84 MVFEYMR----------HGDLNRFLRSHGPDAKIL--------------AGGEDVAPGQLTLGQMLAIASQIASGMVYLA 139 (280)
T ss_pred EEEecCC----------CCCHHHHHHhcCcchhhh--------------cccccCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 9999655 444444443221111000 0000011235788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++........... ...
T Consensus 140 ~~~i~H~dlkp~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~---------------------------------~~~ 184 (280)
T cd05092 140 SLHFVHRDLATRNCLVGQGL--VVKIGDFGMSRDIYSTDYYRVG---------------------------------GRT 184 (280)
T ss_pred HCCeecccccHhhEEEcCCC--CEEECCCCceeEcCCCceeecC---------------------------------CCc
Confidence 99999999999999997654 5999999999765432211000 012
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.+++.|+|||++.+..++.++|||||||++|||++++.+||...... .. .+........+...++++.+||.+||+.|
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 264 (280)
T cd05092 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQRE 264 (280)
T ss_pred cccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCC
Confidence 35788999999999999999999999999999999668888654322 22 22233233333456789999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|.+||++.+|++
T Consensus 265 P~~Rp~~~~l~~ 276 (280)
T cd05092 265 PQQRMVIKDIHS 276 (280)
T ss_pred hhhCCCHHHHHH
Confidence 999999999974
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=313.19 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=188.1
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.++|.+.+.||+|+||+||++...++..||+|++..... +...+|++ +++.++||||+++++.+.+ +..|+|||+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHH-HHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 356889999999999999998666667899999875432 34456665 7788899999999998754 5689999955
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. +|+|.+++... ....+++..++.++.|++.||+|||+.+|+|
T Consensus 83 ~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (262)
T cd05071 83 S----------KGSLLDFLKGE---------------------------MGKYLRLPQLVDMAAQIASGMAYVERMNYVH 125 (262)
T ss_pred C----------CCcHHHHHhhc---------------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4 44444444321 0123577888999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.+......... ...++..|
T Consensus 126 ~dl~p~Nill~~~~--~~~L~dfg~~~~~~~~~~~~~~----------------------------------~~~~~~~y 169 (262)
T cd05071 126 RDLRAANILVGENL--VCKVADFGLARLIEDNEYTARQ----------------------------------GAKFPIKW 169 (262)
T ss_pred cccCcccEEEcCCC--cEEeccCCceeecccccccccc----------------------------------CCccccee
Confidence 99999999997665 4899999999876543211100 02367789
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhh-cccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|||++++.+||....... ...+.. .........+..+.+||.+||+.||++||+
T Consensus 170 ~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 249 (262)
T cd05071 170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 249 (262)
T ss_pred cCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence 999999988999999999999999999997788887653322 222221 112223445678999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.++++
T Consensus 250 ~~~~~~ 255 (262)
T cd05071 250 FEYLQA 255 (262)
T ss_pred HHHHHH
Confidence 999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=312.99 Aligned_cols=249 Identities=21% Similarity=0.355 Sum_probs=186.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---h---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---H---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||.||++.. .+++.||||.+.... . ....+|+. +++.++||||+++++++.+.+..|++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEID-LLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHH-HHHhCCCcceeeeeeeEEECCeEEEE
Confidence 3578889999999999999854 578999999875422 1 12345655 78889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||+. +|+|.+++..... +...+++.+++.++.||+.||+|||++
T Consensus 81 ~e~~~----------~~~L~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~ 125 (267)
T cd08228 81 LELAD----------AGDLSQMIKYFKK-------------------------QKRLIPERTVWKYFVQLCSAVEHMHSR 125 (267)
T ss_pred EEecC----------CCcHHHHHHHhhh-------------------------ccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 99665 3444433321100 123467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|+||||||+|||++.++. ++|+|||++..+....... ....|
T Consensus 126 ~i~H~dl~~~nil~~~~~~--~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~ 168 (267)
T cd08228 126 RVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAA-----------------------------------HSLVG 168 (267)
T ss_pred CeeCCCCCHHHEEEcCCCC--EEECccccceeccchhHHH-----------------------------------hcCCC
Confidence 9999999999999976654 8999999998754321100 01358
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcc--cccccCCCHHHHHHHHHcccCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRK--DLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~--~~~~~~~~~e~~dLI~~~L~~D 781 (934)
++.|+|||.+.+..++.++|||||||++|||++|+.+++..... .....+.... .......+.++.++|.+||+.+
T Consensus 169 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 248 (267)
T cd08228 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPD 248 (267)
T ss_pred CccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 88999999999888999999999999999999975554443321 1122222111 1112234578999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++||++.++++.
T Consensus 249 p~~Rp~~~~vl~~ 261 (267)
T cd08228 249 PDQRPDIGYVHQI 261 (267)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=312.53 Aligned_cols=246 Identities=23% Similarity=0.356 Sum_probs=186.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++...++..||+|.+..... +...+|+. +++.++||||+++++++. .+..|++||++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQ-IMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHH-HHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 45778889999999999998777788899999875332 34456665 788899999999999875 456899999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++... ....+++.+++.++.|++.||+|||+++|+||
T Consensus 84 ----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 126 (260)
T cd05070 84 ----------KGSLLDFLKDG---------------------------EGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 126 (260)
T ss_pred ----------CCcHHHHHHhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 44444444321 01235778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ .++|+|||++..+......... ...++..|+
T Consensus 127 di~p~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~----------------------------------~~~~~~~y~ 170 (260)
T cd05070 127 DLRSANILVGDGL--VCKIADFGLARLIEDNEYTARQ----------------------------------GAKFPIKWT 170 (260)
T ss_pred CCccceEEEeCCc--eEEeCCceeeeeccCccccccc----------------------------------CCCCCcccc
Confidence 9999999997654 5899999999876442211100 023566899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhh-cccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|+|++++.+||...... ....+.. .....+...+.++.+|+.+||..||++|||+
T Consensus 171 aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 250 (260)
T cd05070 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTF 250 (260)
T ss_pred ChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCH
Confidence 9999988889999999999999999999778888654322 2222222 1222234456789999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.++.+
T Consensus 251 ~~l~~ 255 (260)
T cd05070 251 EYLQS 255 (260)
T ss_pred HHHHH
Confidence 98863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=310.80 Aligned_cols=250 Identities=30% Similarity=0.521 Sum_probs=189.5
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|...+.||+|+||.||++.. .+++.||+|.+..... .....|+. +++.++|+||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMK-VLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHH-HHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 367788999999999999854 4689999999875433 23345554 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|+. +++|.+++.. ...+++..+..++.|++.||+|||++||
T Consensus 80 ~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 80 YCS----------GGTLEELLEH-----------------------------GRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred cCC----------CCcHHHHHhh-----------------------------cCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 665 3444443321 1235677888999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||++............. .....|+.
T Consensus 121 ~H~dl~~~nil~~~~~--~~kl~d~g~~~~~~~~~~~~~~~-------------------------------~~~~~~~~ 167 (264)
T cd06626 121 VHRDIKPANIFLDHNG--VIKLGDFGCAVKLKNNTTTMGEE-------------------------------VQSLAGTP 167 (264)
T ss_pred ccCCCCHHHEEECCCC--CEEEcccccccccCCCCCccccc-------------------------------ccCCcCCc
Confidence 9999999999997655 48999999998765433211100 00135788
Q ss_pred ccccchhcccCC---CcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHh-hcccccccCC--CHHHHHHHHHccc
Q 002343 708 GWQAPEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVK-DRKDLFLVEH--IPEAVDLFTRLLD 779 (934)
Q Consensus 708 ~Y~APE~l~~~~---~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~-~~~~~~~~~~--~~e~~dLI~~~L~ 779 (934)
.|+|||++.+.. ++.++|||||||++|++++| ..||..... .....+. ......+... ++++.+||.+||+
T Consensus 168 ~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 246 (264)
T cd06626 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATG-KRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLE 246 (264)
T ss_pred CccChhhccCCCCCCCCcccchHHHHHHHHHHHhC-CCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHcc
Confidence 999999998766 79999999999999999996 667754321 1111122 1122222222 6789999999999
Q ss_pred CCCCCCcCHHHHHcCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff 797 (934)
.||.+||++.+++.|||+
T Consensus 247 ~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 247 SDPKKRPTASELLQHPFV 264 (264)
T ss_pred CCcccCCCHHHHhcCCCC
Confidence 999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=328.61 Aligned_cols=247 Identities=25% Similarity=0.419 Sum_probs=186.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC----
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~---- 540 (934)
+..+|...+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELT-LLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHH-HHHhcCCCCccchhheecccccCCC
Confidence 456788899999999999999854 5689999999865321 23456665 778889999999999987543
Q ss_pred --eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 --~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..|+|+|++..+|.++. ...+++..+..++.|++.|
T Consensus 92 ~~~~~lv~e~~~~~l~~~~------------------------------------------~~~~~~~~~~~~~~qi~~a 129 (342)
T cd07879 92 FQDFYLVMPYMQTDLQKIM------------------------------------------GHPLSEDKVQYLVYQMLCG 129 (342)
T ss_pred CceEEEEecccccCHHHHH------------------------------------------cCCCCHHHHHHHHHHHHHH
Confidence 46999997654333221 2245778889999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||+++|+||||||+|||++.++ .+||+|||+++.......
T Consensus 130 L~~LH~~~i~H~dlkp~NIll~~~~--~~kL~dfg~~~~~~~~~~----------------------------------- 172 (342)
T cd07879 130 LKYIHSAGIIHRDLKPGNLAVNEDC--ELKILDFGLARHADAEMT----------------------------------- 172 (342)
T ss_pred HHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCCCCcCCCCCCC-----------------------------------
Confidence 9999999999999999999997665 499999999875432110
Q ss_pred eeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhh-------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKD------------------- 757 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~------------------- 757 (934)
...||..|+|||++.+ ..++.++|||||||++|||++| +.||.... ......+..
T Consensus 173 ---~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T cd07879 173 ---GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAK 248 (342)
T ss_pred ---CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence 1347889999999876 4589999999999999999996 66665432 111111000
Q ss_pred ----ccccc--------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 758 ----RKDLF--------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 758 ----~~~~~--------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
..... .+..++++.+||.+||+.||++||++++++.||||....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000 123456789999999999999999999999999997653
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=311.89 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=189.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.|.+.++||+|+||+||++...+++.||+|.+..... +...+|+. +++.++||||+++++++. .+..|++||+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEAN-LMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHH-HHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 3456888999999999999999888889999999875443 34455654 888899999999999874 5679999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+. +|+|.+++... ....+++.++..++.|++.||+|||+.||+
T Consensus 82 ~~----------~~~L~~~~~~~---------------------------~~~~~~~~~~~~i~~~i~~al~~LH~~~i~ 124 (260)
T cd05067 82 ME----------NGSLVDFLKTP---------------------------EGIKLTINKLIDMAAQIAEGMAFIERKNYI 124 (260)
T ss_pred CC----------CCCHHHHHHhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 54 44444443221 023457788899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .++|+|||++........... ....++..
T Consensus 125 H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~ 168 (260)
T cd05067 125 HRDLRAANILVSETL--CCKIADFGLARLIEDNEYTAR----------------------------------EGAKFPIK 168 (260)
T ss_pred cccccHHhEEEcCCC--CEEEccCcceeecCCCCcccc----------------------------------cCCccccc
Confidence 999999999997665 499999999987653221100 01235778
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcc-cccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++....++.++|||||||++||++++|.+||...... ....+.... .......+.++.++|.+||+.+|++||
T Consensus 169 y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 248 (260)
T cd05067 169 WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERP 248 (260)
T ss_pred ccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCC
Confidence 999999998889999999999999999999668888654332 222222221 122233467899999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
+++++++
T Consensus 249 ~~~~l~~ 255 (260)
T cd05067 249 TFEYLRS 255 (260)
T ss_pred CHHHHHH
Confidence 9999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=316.97 Aligned_cols=247 Identities=24% Similarity=0.401 Sum_probs=189.6
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+|.+.+.||+|+||+||++... +++.||||++.... .+...+|++ +++.++|+||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVK-VLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHH-HHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 5788899999999999998554 58899999886432 134456665 7788899999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||++++.+.+.. +..++++.++..++.||+.||+|||+++|
T Consensus 81 ~~~~~~l~~~~~---------------------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (288)
T cd07833 81 YVERTLLELLEA---------------------------------------SPGGLPPDAVRSYIWQLLQAIAYCHSHNI 121 (288)
T ss_pred cCCCCHHHHHHh---------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 887654433211 12346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .+||+|||++..+....... .+...|+.
T Consensus 122 ~H~dl~~~ni~~~~~~--~~kl~d~g~~~~~~~~~~~~----------------------------------~~~~~~~~ 165 (288)
T cd07833 122 IHRDIKPENILVSESG--VLKLCDFGFARALRARPASP----------------------------------LTDYVATR 165 (288)
T ss_pred ecCCCCHHHeEECCCC--CEEEEeeecccccCCCcccc----------------------------------ccCccccc
Confidence 9999999999997654 59999999998765432200 01145788
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhh--------------cc-----------
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKD--------------RK----------- 759 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~--------------~~----------- 759 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||........ .+... ..
T Consensus 166 ~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (288)
T cd07833 166 WYRAPELLVGDTNYGKPVDVWAIGCIMAELLDG-EPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPS 244 (288)
T ss_pred CCcCCchhcCCCCcCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCC
Confidence 99999999888 789999999999999999996 667654322111 10000 00
Q ss_pred ------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 ------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 ------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
...+...++++++||.+||..||++||+++++++||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 245 QPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00111236789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=312.82 Aligned_cols=252 Identities=26% Similarity=0.391 Sum_probs=186.4
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhC-CCCceeEEEEEEecCC------e
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASD-QHPNIVRWYGVESDQD------F 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~------~ 541 (934)
.++|.+.+.||+|+||+||++.. .+++.||+|++..... +...+|+. +++.+ +||||+++++++.+.. .
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~-~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYN-ILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHH-HHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 46788899999999999999855 4678999999875443 34456665 55555 7999999999997644 5
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||.+ ++|.+++.... .....+++..+..++.|++.||+|
T Consensus 84 ~~lv~e~~~~----------~~L~~~~~~~~-------------------------~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 84 LWLVMELCGG----------GSVTDLVKGLR-------------------------KKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred EEEEEEcCCC----------CcHHHHHHHHh-------------------------hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999997664 33333332110 012456788899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|+||||+|+||+++.++ .+||+|||++.......... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~--~~~l~d~~~~~~~~~~~~~~-----------------------------------~ 171 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNA--EVKLVDFGVSAQLDSTLGRR-----------------------------------N 171 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCC--eEEECCCccceecccchhhh-----------------------------------c
Confidence 9999999999999999997665 49999999987654321110 0
Q ss_pred cCCCCCccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCchh-H-HHHHHhhccccc--ccCCCHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-R-DANIVKDRKDLF--LVEHIPEAVD 772 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~-~~~i~~~~~~~~--~~~~~~e~~d 772 (934)
...|+..|+|||++.. ..++.++|||||||+||+|++| .+||..... . ...+........ ....+.++++
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (275)
T cd06608 172 TFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADG-KPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFND 250 (275)
T ss_pred CccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhC-CCCccccchHHHHHHhhccCCCCCCchhhcCHHHHH
Confidence 1358999999999854 3467899999999999999996 677754321 1 122222111111 1124578999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff 797 (934)
||.+||..||++|||+.++++|||+
T Consensus 251 li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 251 FISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=326.04 Aligned_cols=267 Identities=24% Similarity=0.345 Sum_probs=193.0
Q ss_pred cceEE-EeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh-----------------HHHHHHHHHHHhCCCCceeEE
Q 002343 472 GKLVV-FNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD-----------------VALKEIQNLIASDQHPNIVRW 532 (934)
Q Consensus 472 ~~~~~-~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~-----------------~~~~Ei~~ll~~l~HpNIV~l 532 (934)
.++|. +.+.||.|+||+||++.. ..++.||||.+...... ...+|+. ++..++||||+++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~ 85 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK-IMNEIKHENIMGL 85 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHH-HHHhCCCcceeee
Confidence 34454 567899999999999854 56899999988643221 2455665 7888999999999
Q ss_pred EEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHH
Q 002343 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (934)
Q Consensus 533 ~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 612 (934)
++++...++.|+|||+|.++|.+++.. ...+++..+..++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~----------------------------------------~~~~~~~~~~~~~ 125 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMASDLKKVVDR----------------------------------------KIRLTESQVKCIL 125 (335)
T ss_pred eEEEecCCcEEEEEeccccCHHHHHHh----------------------------------------cCCCCHHHHHHHH
Confidence 999999999999999877665554411 2235778889999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccc
Q 002343 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECV 692 (934)
Q Consensus 613 ~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (934)
.|++.||+|||++||+||||||+|||++.++ .+||+|||+++................
T Consensus 126 ~ql~~aL~~LH~~~i~H~dl~~~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~-------------------- 183 (335)
T PTZ00024 126 LQILNGLNVLHKWYFMHRDLSPANIFINSKG--ICKIADFGLARRYGYPPYSDTLSKDET-------------------- 183 (335)
T ss_pred HHHHHHHHHHHhCCeecccccHHHeEECCCC--CEEECCccceeeccccccccccccccc--------------------
Confidence 9999999999999999999999999997665 489999999987653221110000000
Q ss_pred cccccceeecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhc---cc------
Q 002343 693 FQFGVLFFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDR---KD------ 760 (934)
Q Consensus 693 ~~~g~~~~t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~---~~------ 760 (934)
.......+...+++.|+|||++.+.. ++.++|||||||++|+|++| .+||....... ..+.... ..
T Consensus 184 -~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 261 (335)
T PTZ00024 184 -MQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG-KPLFPGENEIDQLGRIFELLGTPNEDNWPQA 261 (335)
T ss_pred -ccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCchhhCcch
Confidence 00000111235788999999987644 68999999999999999995 67775432211 1111100 00
Q ss_pred ------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 761 ------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 761 ------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
......+.++.++|.+||+.||++||+++++|.||||+.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 262 KKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred hhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence 0011235688999999999999999999999999999876554
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=316.26 Aligned_cols=245 Identities=27% Similarity=0.423 Sum_probs=189.6
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
|.+.+.||+|+||.||++... +++.||+|++..... ....+|+. +++.++||||+++++.+..++..|+++|+|
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELD-ILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHH-HHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 556778999999999998554 689999999876532 23455665 667788999999999999999999999977
Q ss_pred c-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 550 ~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
. ++|.+++ ... ...+++..+..++.|++.||+|||+ .+|
T Consensus 82 ~~~~L~~~~-----------~~~----------------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~i 122 (265)
T cd06605 82 DGGSLDKIL-----------KEV----------------------------QGRIPERILGKIAVAVLKGLTYLHEKHKI 122 (265)
T ss_pred CCCcHHHHH-----------HHc----------------------------cCCCCHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 6 3555444 210 1345778888999999999999999 999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .++|+|||++..+...... ...|+.
T Consensus 123 ~H~dl~~~ni~~~~~~--~~~l~d~g~~~~~~~~~~~-------------------------------------~~~~~~ 163 (265)
T cd06605 123 IHRDVKPSNILVNSRG--QIKLCDFGVSGQLVNSLAK-------------------------------------TFVGTS 163 (265)
T ss_pred ecCCCCHHHEEECCCC--CEEEeecccchhhHHHHhh-------------------------------------cccCCh
Confidence 9999999999997655 4999999998765322110 034788
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch---h---HH-HHHHhhcccccccC-CCHHHHHHHHHccc
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF---E---RD-ANIVKDRKDLFLVE-HIPEAVDLFTRLLD 779 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~---~~-~~i~~~~~~~~~~~-~~~e~~dLI~~~L~ 779 (934)
.|+|||.+.+..++.++|||||||++|+|++| ..||.... . .. ..+........+.. .++++.++|.+||.
T Consensus 164 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 242 (265)
T cd06605 164 SYMAPERIQGNDYSVKSDIWSLGLSLIELATG-RFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLI 242 (265)
T ss_pred hccCHHHHcCCCCCchhhHHHHHHHHHHHHhC-CCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcC
Confidence 99999999998999999999999999999996 55664331 1 11 11222222222222 56789999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~ 799 (934)
.||++|||+.+++.||||..
T Consensus 243 ~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 243 KDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred CCchhCcCHHHHhhCchhhc
Confidence 99999999999999999954
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=364.92 Aligned_cols=256 Identities=27% Similarity=0.420 Sum_probs=197.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh-H---HHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD-V---ALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~-~---~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.-++.-...||.|.||.||-+.. .+|...|||.+.-...+ . ...|+..++..++|||+|+|||+..+++.+||
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 4444555667899999999999854 56999999987532221 1 22344458899999999999999999999999
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
.||||. |+|.+++.. + .-.++...+.+..|++.|++|||
T Consensus 1312 FMEyC~~GsLa~ll~~-g---------------------------------------ri~dE~vt~vyt~qll~gla~LH 1351 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEH-G---------------------------------------RIEDEMVTRVYTKQLLEGLAYLH 1351 (1509)
T ss_pred HHHHhccCcHHHHHHh-c---------------------------------------chhhhhHHHHHHHHHHHHHHHHH
Confidence 999998 467776632 1 11234556788999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.+| .+|++|||.|+.+........ ... ...
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~g--~iK~~DFGsa~ki~~~~~~~~-------~el------------------------~~~ 1398 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNG--LIKYGDFGSAVKIKNNAQTMP-------GEL------------------------QSM 1398 (1509)
T ss_pred hcCceecCCCccceeeecCC--cEEeecccceeEecCchhcCC-------HHH------------------------Hhh
Confidence 99999999999999997766 499999999998876521111 000 015
Q ss_pred CCCCccccchhcccCC---CcccccccchhhhhHHhhcCCCCCCCCch---hHHHHHHhhcccccccCCCHHHHHHHHHc
Q 002343 704 YGSSGWQAPEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESF---ERDANIVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~---~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~~~~~i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
.||+.|||||++.+.. ...++||||||||+.||+|| +.||.+.. .-...+..+..+..+...+++.+|||.+|
T Consensus 1399 ~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tG-krPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~C 1477 (1509)
T KOG4645|consen 1399 MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATG-KRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHC 1477 (1509)
T ss_pred cCCchhcCchhhcccccCCCCcchhhhcccceEEEeecC-CCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHH
Confidence 7999999999998643 57899999999999999997 66765432 22233334455566666889999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCC
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~ 799 (934)
|+.||++|.++.|+|+|.|-..
T Consensus 1478 l~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1478 LEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred HhcCchhhhHHHHHHHhhcccc
Confidence 9999999999999999998643
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=318.45 Aligned_cols=247 Identities=25% Similarity=0.370 Sum_probs=188.6
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|+||+||++.. .+|+.||+|++..... ....+|++ +++.++||||+++++++.+.+..|+||||
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQ-IMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHH-HHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 466678999999999999754 4688999998864432 23445655 67788999999999999999999999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
++ +|+|.+++.. ...+++..+..++.|++.||.|||+ ++|
T Consensus 85 ~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i 125 (284)
T cd06620 85 MD----------CGSLDRIYKK-----------------------------GGPIPVEILGKIAVAVVEGLTYLYNVHRI 125 (284)
T ss_pred CC----------CCCHHHHHHh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHhcCe
Confidence 54 4444443321 2345778889999999999999997 689
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .++|+|||++........ ....||.
T Consensus 126 ~H~dl~p~nil~~~~~--~~~l~d~gl~~~~~~~~~-------------------------------------~~~~~~~ 166 (284)
T cd06620 126 MHRDIKPSNILVNSRG--QIKLCDFGVSGELINSIA-------------------------------------DTFVGTS 166 (284)
T ss_pred eccCCCHHHEEECCCC--cEEEccCCcccchhhhcc-------------------------------------CccccCc
Confidence 9999999999997655 499999999875432110 0145899
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-------------HHHHHhhccccc-ccCCCHHHHHH
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-------------DANIVKDRKDLF-LVEHIPEAVDL 773 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-------------~~~i~~~~~~~~-~~~~~~e~~dL 773 (934)
.|+|||++.+..++.++|||||||++|++++| ..||...... ...+........ ....+.++.+|
T Consensus 167 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
T cd06620 167 TYMSPERIQGGKYTVKSDVWSLGISIIELALG-KFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDF 245 (284)
T ss_pred ccCCHHHHccCCCCccchHHHHHHHHHHHHhC-CCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHH
Confidence 99999999888899999999999999999996 6677543221 011111111111 12255789999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
|.+||+.||++|||+.|+++||||...
T Consensus 246 i~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 246 VDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHhcCCcccCcCHHHHhcCcccccc
Confidence 999999999999999999999999543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.21 Aligned_cols=249 Identities=22% Similarity=0.257 Sum_probs=182.2
Q ss_pred EeeeecccCcEEEEEEEEec-Cc--EEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC------CeE
Q 002343 477 FNKEIAKGSNGTVVLEGNYE-GR--SVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ------DFV 542 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~-g~--~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~------~~~ 542 (934)
+.+.||+|+||.||++.... +. .||||.+.... .+...+|++ +++.++||||+++++++... ...
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAV-CMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 46789999999999986543 33 69999886432 123345554 77888999999999987432 257
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+++|||| .+|+|.+++...... .....+++..+..++.||+.||+||
T Consensus 82 ~~v~e~~----------~~~~l~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~i~~~l~~l 128 (272)
T cd05075 82 VVILPFM----------KHGDLHSFLLYSRLG-----------------------DCPQYLPTQMLVKFMTDIASGMEYL 128 (272)
T ss_pred EEEEEeC----------CCCcHHHHHHHhccc-----------------------CCcccCCHHHHHHHHHHHHHHHHHH
Confidence 8999954 445555544211100 0123467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++ .+||+|||+++.+......... ..
T Consensus 129 H~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~---------------------------------~~ 173 (272)
T cd05075 129 SSKSFIHRDLAARNCMLNENM--NVCVADFGLSKKIYNGDYYRQG---------------------------------RI 173 (272)
T ss_pred HHCCeeccccchhheEEcCCC--CEEECCCCcccccCcccceecC---------------------------------Cc
Confidence 999999999999999997655 4899999999876543211100 01
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..+++.|+|||++.+..++.++|||||||++|||++++..||...... ....+... ...........+.++|.+||+.
T Consensus 174 ~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 253 (272)
T cd05075 174 AKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLL 253 (272)
T ss_pred ccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 246778999999999899999999999999999999778888654322 22222222 2223344567899999999999
Q ss_pred CCCCCcCHHHHHcC
Q 002343 781 NPDLRPKAQNVLNH 794 (934)
Q Consensus 781 DP~~RPTa~evL~H 794 (934)
||++|||+.+++++
T Consensus 254 ~p~~Rps~~~l~~~ 267 (272)
T cd05075 254 NPKDRPSFETLRCE 267 (272)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=316.73 Aligned_cols=246 Identities=26% Similarity=0.421 Sum_probs=186.1
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||.|++|+||++.. .+|+.||||++.... .....+|+. +++.++||||+++++++.+++..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREIS-LLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHH-HHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 34567899999999999854 579999999986432 134556765 77888999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
++++|.+++. .. ....+++..++.++.||+.||+|||+++++
T Consensus 80 ~~~~l~~~~~-----------~~---------------------------~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~ 121 (283)
T cd07835 80 LDLDLKKYMD-----------SS---------------------------PLTGLDPPLIKSYLYQLLQGIAYCHSHRVL 121 (283)
T ss_pred cCcCHHHHHh-----------hC---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 7655555442 10 012467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||+|+||+++.++ .++|+|||+++.+....... +...++..
T Consensus 122 H~dl~p~nil~~~~~--~~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 164 (283)
T cd07835 122 HRDLKPQNLLIDREG--ALKLADFGLARAFGVPVRTY-----------------------------------THEVVTLW 164 (283)
T ss_pred CCCCCHHHEEEcCCC--cEEEeecccccccCCCcccc-----------------------------------CccccccC
Confidence 999999999997655 59999999997654321110 01346889
Q ss_pred cccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc---------------------c-----
Q 002343 709 WQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR---------------------K----- 759 (934)
Q Consensus 709 Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~---------------------~----- 759 (934)
|+|||++.+. .++.++|||||||++|+|++| .+||..... ....+.... .
T Consensus 165 ~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd07835 165 YRAPEILLGSRQYSTPVDIWSIGCIFAEMVNR-RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQ 243 (283)
T ss_pred CCCCceeecCcccCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccccc
Confidence 9999988764 468899999999999999996 566643321 111111100 0
Q ss_pred --cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 --DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 --~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.......++++.++|.+||+.||++|||++++++||||
T Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 244 DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00112345789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=308.95 Aligned_cols=249 Identities=24% Similarity=0.409 Sum_probs=190.3
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yLVm 546 (934)
|.+.+.||.|+||+||++. ..+++.||+|++..... +....|++ +++.++||||+++++++.. +...|++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVN-ILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHH-HHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 6677899999999999984 46789999999864322 22334554 7888999999999997754 45789999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH---
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH--- 623 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH--- 623 (934)
|||. +|+|.+++..... ....+++.+++.++.||+.||+|||
T Consensus 81 e~~~----------~~~L~~~l~~~~~-------------------------~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 125 (265)
T cd08217 81 EYCE----------GGDLAQLIQKCKK-------------------------ERKYIEEEFIWRILTQLLLALYECHNRS 125 (265)
T ss_pred hhcc----------CCCHHHHHHHHhh-------------------------cccCCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 9554 4455544432100 1345678899999999999999999
Q ss_pred --HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 624 --EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 624 --s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
+.+|+||||||+||+++.++ .+||+|||++..+....... .
T Consensus 126 ~~~~~i~h~dl~p~nili~~~~--~~kl~d~g~~~~~~~~~~~~-----------------------------------~ 168 (265)
T cd08217 126 DPGNTVLHRDLKPANIFLDANN--NVKLGDFGLAKILGHDSSFA-----------------------------------K 168 (265)
T ss_pred cccCcceecCCCHHHEEEecCC--CEEEecccccccccCCcccc-----------------------------------c
Confidence 89999999999999997665 49999999998765432110 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHh-hcccccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVK-DRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
...|++.|+|||++.+..++.++|||||||++|+|++| ..||..... .....+. ......+...+.++.+|+.+||+
T Consensus 169 ~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 247 (265)
T cd08217 169 TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCAL-SPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLN 247 (265)
T ss_pred ccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHC-CCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence 13589999999999988899999999999999999996 677765432 2222222 22222334566899999999999
Q ss_pred CCCCCCcCHHHHHcCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff 797 (934)
.+|++||++.+|++|||+
T Consensus 248 ~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 248 VDPDKRPSTEELLQLPLI 265 (265)
T ss_pred CCcccCCCHHHHhhCCCC
Confidence 999999999999999995
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=318.87 Aligned_cols=252 Identities=29% Similarity=0.398 Sum_probs=191.3
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++... +++.||||++.+... ....+|+..+.....||||+++++++.+....|++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 45677889999999999998654 489999999975432 2345566555556679999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IG 626 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~g 626 (934)
++.++|.+++... ...+++..+..++.||+.||+|||+ .|
T Consensus 95 ~~~~~l~~l~~~~---------------------------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~ 135 (296)
T cd06618 95 LMSTCLDKLLKRI---------------------------------------QGPIPEDILGKMTVAIVKALHYLKEKHG 135 (296)
T ss_pred ccCcCHHHHHHHh---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8776655544210 2346778888999999999999997 59
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+||+++.++ .+||+|||++..+...... ....|+
T Consensus 136 i~H~dl~p~nill~~~~--~~kL~dfg~~~~~~~~~~~------------------------------------~~~~~~ 177 (296)
T cd06618 136 VIHRDVKPSNILLDASG--NVKLCDFGISGRLVDSKAK------------------------------------TRSAGC 177 (296)
T ss_pred EecCCCcHHHEEEcCCC--CEEECccccchhccCCCcc------------------------------------cCCCCC
Confidence 99999999999996554 5999999998765432111 013478
Q ss_pred CccccchhcccCC----CcccccccchhhhhHHhhcCCCCCCCCchhH---HHHHHhhcccccc--cCCCHHHHHHHHHc
Q 002343 707 SGWQAPEQLLQGR----QTRAIDLFSLGCILFFCITGGKHPYGESFER---DANIVKDRKDLFL--VEHIPEAVDLFTRL 777 (934)
Q Consensus 707 ~~Y~APE~l~~~~----~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~~i~~~~~~~~~--~~~~~e~~dLI~~~ 777 (934)
..|+|||++.+.. ++.++|||||||++|+|++| ..||...... ...+......... ...+.++.+||.+|
T Consensus 178 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 256 (296)
T cd06618 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATG-QFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLC 256 (296)
T ss_pred ccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhC-CCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 8999999987554 78999999999999999996 6777542221 1122222211111 12467899999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
|..||++||++++++.||||.....
T Consensus 257 l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 257 LTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred ccCChhhCCCHHHHhcChhhhccch
Confidence 9999999999999999999965443
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=311.90 Aligned_cols=239 Identities=26% Similarity=0.354 Sum_probs=179.9
Q ss_pred eecccCcEEEEEEEE---ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 480 EIAKGSNGTVVLEGN---YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~---~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+||+|+||+||++.. .+++.||+|++..... +...+|+. +++.++||||+++++++.. +..++|||++.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~- 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREAN-VMQQLDNPYIVRMIGICEA-ESWMLVMELAE- 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHH-HHHhCCCCCcceEEEEEcC-CCcEEEEecCC-
Confidence 689999999999743 3578999999864432 23344544 7788999999999998864 56789999655
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++.. ...+++..+..++.|++.||+|||++||+|||
T Consensus 79 ---------~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 79 ---------LGPLNKFLQK-----------------------------NKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred ---------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 4445444421 23457788899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++.+.......... +...++..|+|
T Consensus 121 lkp~nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~--------------------------------~~~~~~~~y~a 166 (257)
T cd05116 121 LAARNVLLVTQH--YAKISDFGLSKALGADENYYKAK--------------------------------THGKWPVKWYA 166 (257)
T ss_pred cchhhEEEcCCC--eEEECCCccccccCCCCCeeeec--------------------------------CCCCCCccccC
Confidence 999999997654 59999999998765433211110 01335678999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-cccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||.+....++.++|||||||++|||++.+.+||..... .....+.. .....+...++++.+||.+||+.||++||+++
T Consensus 167 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~ 246 (257)
T cd05116 167 PECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFA 246 (257)
T ss_pred HhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHH
Confidence 99998888999999999999999999855788865432 22233332 22233445678999999999999999999999
Q ss_pred HHHc
Q 002343 790 NVLN 793 (934)
Q Consensus 790 evL~ 793 (934)
+|..
T Consensus 247 ~i~~ 250 (257)
T cd05116 247 VVEL 250 (257)
T ss_pred HHHH
Confidence 9864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=320.28 Aligned_cols=250 Identities=25% Similarity=0.369 Sum_probs=190.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.+.|...+.||+|+||+||++.. .+|+.||+|++..... ....+|+. +++.++|||++++++++.+.+..|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVK-FLQQLKHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHH-HHHhCCCCCCccEEEEEEeCCEEE
Confidence 344566678899999999999854 5689999999864321 23345554 778889999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+++.+++... ...+++.+++.++.||+.||+|||
T Consensus 98 lv~e~~~~~l~~~l~~~---------------------------------------~~~l~~~~~~~~~~qi~~al~~LH 138 (313)
T cd06633 98 LVMEYCLGSASDLLEVH---------------------------------------KKPLQEVEIAAITHGALQGLAYLH 138 (313)
T ss_pred EEEecCCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999887766554211 234577888999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+||+++.++ .+||+|||++....... ..
T Consensus 139 ~~gi~H~dl~p~nili~~~~--~~kL~dfg~~~~~~~~~---------------------------------------~~ 177 (313)
T cd06633 139 SHNMIHRDIKAGNILLTEPG--QVKLADFGSASKSSPAN---------------------------------------SF 177 (313)
T ss_pred HCCeecCCCChhhEEECCCC--CEEEeecCCCcccCCCC---------------------------------------Cc
Confidence 99999999999999997665 49999999985422110 13
Q ss_pred CCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhhcc-cccccCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKDRK-DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~~~-~~~~~~~~~e~~dLI~~~L 778 (934)
.|+..|+|||++. ...++.++|||||||++|+|++|..+++........ .+..... .......+..+++|+.+||
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHc
Confidence 5888999999984 356788999999999999999974433343322222 2222211 1122234568999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCcc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+.+|.+||++.+++.||||....
T Consensus 258 ~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 258 QKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred cCChhhCcCHHHHhcCcccCCCc
Confidence 99999999999999999997644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=314.30 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=188.5
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yLVm 546 (934)
.|...+.||.|++|+||++.. .+++.||+|.+..... ....+|++ +++.++||||+++++++.+ .+.+|+||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELE-INKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHH-HHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 467788999999999999865 4688999999875432 34566765 7788999999999998865 44799999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||++ |+|.+++..... ....+++..+..++.||+.||+|||+.|
T Consensus 81 e~~~~----------~~L~~~l~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~lH~~~ 125 (287)
T cd06621 81 EYCEG----------GSLDSIYKKVKK-------------------------RGGRIGEKVLGKIAESVLKGLSYLHSRK 125 (287)
T ss_pred EecCC----------CCHHHHHHHHHh-------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 96653 344433321100 1234677889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
++||||+|+||+++.++ .++|+|||++......... ...++
T Consensus 126 i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~-------------------------------------~~~~~ 166 (287)
T cd06621 126 IIHRDIKPSNILLTRKG--QVKLCDFGVSGELVNSLAG-------------------------------------TFTGT 166 (287)
T ss_pred cccCCCCHHHEEEecCC--eEEEeeccccccccccccc-------------------------------------cccCC
Confidence 99999999999997655 4999999998754322110 13478
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh------HHHHHHhhcccccc-------cCCCHHHHHH
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE------RDANIVKDRKDLFL-------VEHIPEAVDL 773 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~------~~~~i~~~~~~~~~-------~~~~~e~~dL 773 (934)
..|+|||.+.+..++.++|||||||++|+|++| ..||..... .....+........ ...++++.+|
T Consensus 167 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (287)
T cd06621 167 SFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN-RFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDF 245 (287)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHH
Confidence 899999999988999999999999999999996 667754311 11111111111111 1124678999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
|.+||..||.+|||+.|++.||||.+..
T Consensus 246 i~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 246 IKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred HHHHcCCCcccCCCHHHHHhCccccccc
Confidence 9999999999999999999999995543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=354.59 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=200.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEe--cCc----EEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY--EGR----SVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~--~g~----~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+...+.+.||+|.||.||.+... .|. .||||.+.+.... ..++| ..+|+.++|||||+++|++.+....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~E-a~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKE-ALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHH-HHHHhcCCCcceeeEEEeecCCCCc
Confidence 34566789999999999997433 343 4999999765432 23444 4589999999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|++| ||++|+|..||++.+... .....+...+++.++.|||+|++||
T Consensus 771 ~i~le----------yM~gGDL~sflr~~r~~~----------------------~~~~~L~~~dLl~~a~dvA~G~~YL 818 (1025)
T KOG1095|consen 771 LILLE----------YMEGGDLLSFLRESRPAP----------------------FQPSNLSMRDLLAFALDVAKGMNYL 818 (1025)
T ss_pred EEEeh----------hcccCcHHHHHHhccccc----------------------CCCCCCCHHHHHHHHHHHhhhhHHH
Confidence 99999 999999999998643221 1145577889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
+++++|||||..+|+||+.. ..|||+|||||+.+............
T Consensus 819 e~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDiy~~~yyr~~~~a-------------------------------- 864 (1025)
T KOG1095|consen 819 ESKHFVHRDLAARNCLLDER--RVVKIADFGLARDIYDKDYYRKHGEA-------------------------------- 864 (1025)
T ss_pred HhCCCcCcchhhhheeeccc--CcEEEcccchhHhhhhchheeccCcc--------------------------------
Confidence 99999999999999999654 56999999999965544433222111
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHH-HhhcccccccC-CCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI-VKDRKDLFLVE-HIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i-~~~~~~~~~~~-~~~e~~dLI~~~L~~ 780 (934)
.=...|||||.+..+.+|.|+|||||||+|||++|.|..||++....+... ......+.++. ++..+.+++..||+.
T Consensus 865 -~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~ 943 (1025)
T KOG1095|consen 865 -MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKH 943 (1025)
T ss_pred -ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccC
Confidence 112479999999999999999999999999999999999999876554433 33333454444 456788999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
+|++||++..|++
T Consensus 944 ~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 944 DPEDRPSFRTIVE 956 (1025)
T ss_pred ChhhCccHHHHHh
Confidence 9999999999987
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=327.20 Aligned_cols=250 Identities=24% Similarity=0.376 Sum_probs=189.0
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~----- 539 (934)
++++|.+.+.||+|+||+||++. ..+++.||||.+.... .....+|+. +++.++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIK-LLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHH-HHHhcCCCCccchHHheeccccccc
Confidence 45678899999999999999985 4568999999986432 123455665 77788999999999987654
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
...|+|||||.++|.+++.. ...+++..++.++.||+.||
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~----------------------------------------~~~l~~~~~~~i~~qi~~aL 121 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRS----------------------------------------SQTLSDDHCQYFLYQLLRGL 121 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhc----------------------------------------CCCCCHHHHHHHHHHHHHHH
Confidence 35899999887766554411 23467888999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||+++|+||||||+|||++.++ .+||+|||+++........
T Consensus 122 ~~LH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~----------------------------------- 164 (337)
T cd07858 122 KYIHSANVLHRDLKPSNLLLNANC--DLKICDFGLARTTSEKGDF----------------------------------- 164 (337)
T ss_pred HHHHhCCEecCCCCHHHEEEcCCC--CEEECcCccccccCCCccc-----------------------------------
Confidence 999999999999999999997665 4999999999865432110
Q ss_pred eecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-H----------------------
Q 002343 700 FTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-I---------------------- 754 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i---------------------- 754 (934)
.....||..|+|||++.+ ..++.++|||||||++|+|++| .+||..... .... +
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07858 165 MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGR-KPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARR 243 (337)
T ss_pred ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcC-CCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhH
Confidence 011357889999999875 4689999999999999999996 667743211 0000 0
Q ss_pred -Hhhcc-------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 755 -VKDRK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 755 -~~~~~-------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
++... .......++++.+||.+||+.||++|||++++++||||..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 244 YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 00000 0011245678999999999999999999999999999954
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=312.57 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=190.1
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||.||++... .+..||+|.+..... ....+|++ +++.++||||+++++++.+....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEAS-VMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHH-HHHhCCCCceeEEEEEEcCCCCc
Confidence 46778899999999999997543 247899999865432 12345554 77888999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||. +|+|.+++........ .......+++..++.++.||+.||.||
T Consensus 85 ~~v~e~~~----------~~~L~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~l~~l 135 (277)
T cd05032 85 LVVMELMA----------KGDLKSYLRSRRPEAE-------------------NNPGLGPPTLQKFIQMAAEIADGMAYL 135 (277)
T ss_pred EEEEecCC----------CCCHHHHHHhcccchh-------------------hccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999664 3444444432110000 000123467788999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++. +||+|||+++.+........ . +.
T Consensus 136 H~~~i~H~di~p~nill~~~~~--~kl~dfg~~~~~~~~~~~~~-~--------------------------------~~ 180 (277)
T cd05032 136 AAKKFVHRDLAARNCMVAEDLT--VKIGDFGMTRDIYETDYYRK-G--------------------------------GK 180 (277)
T ss_pred HhCCccccccChheEEEcCCCC--EEECCcccchhhccCccccc-C--------------------------------CC
Confidence 9999999999999999976654 89999999987654321110 0 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-cccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..+|..|+|||.+.+..++.++|||||||++||+++++.+||..... ........ .....+...+.++.++|.+||+.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 260 (277)
T cd05032 181 GLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQY 260 (277)
T ss_pred CCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 34788999999998888999999999999999999966888865432 22222222 22233445578999999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
+|++|||+.++++
T Consensus 261 ~p~~Rpt~~~l~~ 273 (277)
T cd05032 261 NPKMRPTFLEIVS 273 (277)
T ss_pred ChhhCCCHHHHHH
Confidence 9999999999985
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=315.59 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=190.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh----HHHHHHHHHHHhC-CCCceeEEEEEEecCCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASD-QHPNIVRWYGVESDQDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~ 541 (934)
..|.+.+.||+|+||.||++... ....||+|.+...... ...+|+. ++..+ +||||+++++++..++.
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEcCCCC
Confidence 45788899999999999997543 2368999998754332 3455665 55566 89999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhh-HhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI-ELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|++||||. +|+|..++.......... ... .......+++..++.++.||+.||+
T Consensus 91 ~~li~e~~~----------~~~L~~~l~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 146 (293)
T cd05053 91 LYVVVEYAA----------HGNLRDFLRARRPPGEYA--------------SPDDPRPPEETLTQKDLVSFAYQVARGME 146 (293)
T ss_pred eEEEEEeCC----------CCcHHHHHHhcCCCcccc--------------ccccccccccccCHHHHHHHHHHHHHHHH
Confidence 999999654 344444443221100000 000 0001345788899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+++|+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 147 ~LH~~~ivH~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~--------------------------------- 191 (293)
T cd05053 147 FLASKKCIHRDLAARNVLVTEDH--VMKIADFGLARDIHHIDYYRKT--------------------------------- 191 (293)
T ss_pred HHHHCCccccccceeeEEEcCCC--eEEeCccccccccccccceecc---------------------------------
Confidence 99999999999999999997665 5899999999876543211100
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcc-cccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRK-DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L 778 (934)
+...++..|+|||++.+..++.++|||||||++||+++.+.+||.... ......+.... ...+...+.++.+|+.+||
T Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 271 (293)
T cd05053 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCW 271 (293)
T ss_pred CCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 012356789999999988999999999999999999985677776543 23333332222 2233455689999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
..||++|||+.+++++
T Consensus 272 ~~~p~~Rps~~eil~~ 287 (293)
T cd05053 272 HEVPSQRPTFKQLVED 287 (293)
T ss_pred ccCcccCcCHHHHHHH
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=314.39 Aligned_cols=245 Identities=28% Similarity=0.441 Sum_probs=181.2
Q ss_pred EEeeeecccCcEEEEEEEEe-----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 476 VFNKEIAKGSNGTVVLEGNY-----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~-----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.+.||.|+||.||++... .+..||||.+..... +...+|++ .++.++||||++++|++...+..++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~-~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQ-ILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHH-HHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccc-ccccccccccccccccccccccccccc
Confidence 35678999999999998666 357899999965332 34455655 667779999999999999888899999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.++|... ....+++.++..++.||+.||+|||+++
T Consensus 81 e~~~----------~g~L~~~L~~~---------------------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ 123 (259)
T PF07714_consen 81 EYCP----------GGSLDDYLKSK---------------------------NKEPLSEQQRLSIAIQIAEALSYLHSNN 123 (259)
T ss_dssp E--T----------TEBHHHHHHHT---------------------------CTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccc----------ccccccccccc---------------------------cccccccccccccccccccccccccccc
Confidence 9665 34444444321 0234677889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+|+||+|+|||++.++ .+||+|||+++........... . ...+.
T Consensus 124 iiH~~l~~~nill~~~~--~~Kl~~f~~~~~~~~~~~~~~~-~--------------------------------~~~~~ 168 (259)
T PF07714_consen 124 IIHGNLSPSNILLDSNG--QVKLSDFGLSRPISEKSKYKND-S--------------------------------SQQLP 168 (259)
T ss_dssp EEEST-SGGGEEEETTT--EEEEESTTTGEETTTSSSEEES-T--------------------------------TSESG
T ss_pred ccccccccccccccccc--cccccccccccccccccccccc-c--------------------------------ccccc
Confidence 99999999999997655 6999999999876332211100 0 02356
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
..|+|||.+.+..++.++||||||+++||+++++..||.+..... . .+........+...+..+.++|.+||..||++
T Consensus 169 ~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~ 248 (259)
T PF07714_consen 169 LRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEK 248 (259)
T ss_dssp GGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhh
Confidence 789999999999999999999999999999997778887654333 2 22222233334456789999999999999999
Q ss_pred CcCHHHHHc
Q 002343 785 RPKAQNVLN 793 (934)
Q Consensus 785 RPTa~evL~ 793 (934)
||++.++++
T Consensus 249 RPs~~~i~~ 257 (259)
T PF07714_consen 249 RPSFQEILQ 257 (259)
T ss_dssp S--HHHHHH
T ss_pred CcCHHHHHh
Confidence 999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=309.27 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=190.9
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||+||++...+++.||||.+..... ....+|+. +++.++||||+++++++.+....|+|||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQ-IMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHH-HHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 456888999999999999998777778999999875433 34455655 778899999999999999999999999954
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
+ +++|.+++.... ...+++.+++.++.||+.||+|||++||+|
T Consensus 84 ~----------~~~L~~~i~~~~---------------------------~~~~~~~~~~~~~~~i~~al~~lh~~~i~h 126 (261)
T cd05034 84 S----------KGSLLDFLKSGE---------------------------GKKLRLPQLVDMAAQIAEGMAYLESRNYIH 126 (261)
T ss_pred C----------CCCHHHHHhccc---------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4 445554443210 124577889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+||+++.++. +||+|||+++.+......... ...++..|
T Consensus 127 ~di~p~nili~~~~~--~~l~d~g~~~~~~~~~~~~~~----------------------------------~~~~~~~y 170 (261)
T cd05034 127 RDLAARNILVGENLV--CKIADFGLARLIEDDEYTARE----------------------------------GAKFPIKW 170 (261)
T ss_pred CCcchheEEEcCCCC--EEECccccceeccchhhhhhh----------------------------------ccCCCccc
Confidence 999999999977654 899999999876532111000 02256789
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||.+.+..++.++|||||||++|++++++.+||...... ....+... ....+...+.++.+++.+||+.+|.+||+
T Consensus 171 ~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 171 TAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred cCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 99999998889999999999999999999668888654322 22222221 22223345678999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
++++++
T Consensus 251 ~~~l~~ 256 (261)
T cd05034 251 FEYLQS 256 (261)
T ss_pred HHHHHH
Confidence 999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=310.80 Aligned_cols=240 Identities=24% Similarity=0.349 Sum_probs=180.1
Q ss_pred eecccCcEEEEEEEEe---cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 480 EIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
.||+|+||.||++... .+..||||++..... +...+|+. +++.++||||+++++++.. +..|+||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~-~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~-- 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAE-IMHQLDNPYIVRMIGVCEA-EALMLVMEMAS-- 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHH-HHHhcCCCCeEEEEEEEcC-CCeEEEEEeCC--
Confidence 4899999999987442 356799999865432 22345555 7888999999999998864 57899999554
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
+|+|.+++... ...+++.+++.++.||+.||+|||++||+||||
T Consensus 78 --------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 121 (257)
T cd05115 78 --------GGPLNKFLSGK----------------------------KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDL 121 (257)
T ss_pred --------CCCHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence 44454444321 234678889999999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
||+|||++.++ .+||+|||+++.+..+....... +...++..|+||
T Consensus 122 kp~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~--------------------------------~~~~~~~~y~aP 167 (257)
T cd05115 122 AARNVLLVNQH--YAKISDFGLSKALGADDSYYKAR--------------------------------SAGKWPLKWYAP 167 (257)
T ss_pred chheEEEcCCC--cEEeccCCccccccCCccceecc--------------------------------CCCCCCcccCCH
Confidence 99999997655 49999999998665433211100 012346789999
Q ss_pred hhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcCHHH
Q 002343 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQN 790 (934)
Q Consensus 713 E~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~e 790 (934)
|++.+..++.++|||||||++||+++.+.+||...... ....+. ......+...++++.++|.+||..||++||++.+
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~ 247 (257)
T cd05115 168 ECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAK 247 (257)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 99988889999999999999999997557788654332 222222 2223334455789999999999999999999999
Q ss_pred HHc
Q 002343 791 VLN 793 (934)
Q Consensus 791 vL~ 793 (934)
|++
T Consensus 248 i~~ 250 (257)
T cd05115 248 VEE 250 (257)
T ss_pred HHH
Confidence 865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=313.92 Aligned_cols=246 Identities=23% Similarity=0.303 Sum_probs=186.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCc----EEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGR----SVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~----~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||+||++.. .+|+ .||||.+...... ...+|+. ++..++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY-VMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHH-HHHhcCCCCCceEEEEEcC-CCcE
Confidence 4577889999999999999853 3454 5899998654332 2334443 6778899999999999875 4578
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
++|| ++++|+|.+++... ...+++.+++.++.||+.||+|||
T Consensus 85 l~~~----------~~~~g~l~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~L~~lH 126 (279)
T cd05109 85 LVTQ----------LMPYGCLLDYVREN----------------------------KDRIGSQDLLNWCVQIAKGMSYLE 126 (279)
T ss_pred EEEE----------cCCCCCHHHHHhhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 55566666655421 234678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++|+||||||+|||++.++. +||+|||+++.+......... ...
T Consensus 127 ~~~iiH~dlkp~Nil~~~~~~--~kL~dfG~~~~~~~~~~~~~~---------------------------------~~~ 171 (279)
T cd05109 127 EVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHA---------------------------------DGG 171 (279)
T ss_pred HCCeeccccccceEEEcCCCc--EEECCCCceeecccccceeec---------------------------------CCC
Confidence 999999999999999976554 899999999877543221100 002
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.++..|+|||++.+..++.++|||||||++|||++.+.+||...... ....+... ....+...+.++.++|.+||+.|
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 251 (279)
T cd05109 172 KVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMID 251 (279)
T ss_pred ccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCC
Confidence 35678999999999899999999999999999999668888654332 22323222 22233445689999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||++.+++.
T Consensus 252 p~~Rp~~~~l~~ 263 (279)
T cd05109 252 SECRPRFRELVD 263 (279)
T ss_pred hhhCcCHHHHHH
Confidence 999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=318.76 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=190.6
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~ 537 (934)
....|.+.+.||+|+||+||++... .+..||+|.+..... ....+|+. ++..+ +||||+++++++.
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEME-MMKMIGKHKNIINLLGACT 94 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHH-HHHHhcCCCCEeeEEEEEe
Confidence 3467899999999999999987432 235799999875432 23445665 45555 8999999999999
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+.+..|+|||||. +|+|.+++........ .............+++.+++.++.||+.
T Consensus 95 ~~~~~~lv~e~~~----------~~~L~~~i~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 151 (307)
T cd05098 95 QDGPLYVIVEYAS----------KGNLREYLRARRPPGM-------------EYCYNPTQVPEEQLSFKDLVSCAYQVAR 151 (307)
T ss_pred cCCceEEEEecCC----------CCcHHHHHHhcCCccc-------------ccccccccCccccCCHHHHHHHHHHHHH
Confidence 9999999999665 3444444432211000 0000000001235788899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++.+........ .
T Consensus 152 aL~~lH~~gi~H~dlkp~Nill~~~~--~~kL~dfg~a~~~~~~~~~~~-~----------------------------- 199 (307)
T cd05098 152 GMEYLASKKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKK-T----------------------------- 199 (307)
T ss_pred HHHHHHHCCcccccccHHheEEcCCC--cEEECCCcccccccccchhhc-c-----------------------------
Confidence 99999999999999999999997665 489999999876543211100 0
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcc-cccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRK-DLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~-~~~~~~~~~e~~dLI~ 775 (934)
....++..|+|||++.+..++.++|||||||++|||++++.+||...... ....+.... ...+...+.++.+||.
T Consensus 200 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (307)
T cd05098 200 ---TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 276 (307)
T ss_pred ---ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 01235678999999998889999999999999999999778888654432 233333222 2233445689999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||..+|++||++.+++++
T Consensus 277 ~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 277 DCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcccChhhCcCHHHHHHH
Confidence 9999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=302.77 Aligned_cols=246 Identities=28% Similarity=0.406 Sum_probs=193.2
Q ss_pred eeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhH----HHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 478 NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~----~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
...||.|+.|+|+++.. .+|...|||.+.+..... .++.+..++...++|.||+++|+|..+..++|.||++..-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C 176 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC 176 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence 45799999999999854 568999999998765543 4445555666667999999999999999999999954432
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRD 631 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gIVHRD 631 (934)
++.++. .-.+++|+..+-++...+++||.||.+ ++|||||
T Consensus 177 ~ekLlk---------------------------------------rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRD 217 (391)
T KOG0983|consen 177 AEKLLK---------------------------------------RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRD 217 (391)
T ss_pred HHHHHH---------------------------------------HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecc
Confidence 222211 014567888888999999999999996 5899999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
+||+|||++..|+ +||||||+|.++.+..... ...|.+.|||
T Consensus 218 vKPSNILlDe~Gn--iKlCDFGIsGrlvdSkAht------------------------------------rsAGC~~YMa 259 (391)
T KOG0983|consen 218 VKPSNILLDERGN--IKLCDFGISGRLVDSKAHT------------------------------------RSAGCAAYMA 259 (391)
T ss_pred cCccceEEccCCC--EEeecccccceeecccccc------------------------------------cccCCccccC
Confidence 9999999966554 9999999999887654321 1469999999
Q ss_pred chhcc---cCCCcccccccchhhhhHHhhcCCCCCCCC---chhHHHHHHhhccccccc--CCCHHHHHHHHHcccCCCC
Q 002343 712 PEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGE---SFERDANIVKDRKDLFLV--EHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 712 PE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~---~~~~~~~i~~~~~~~~~~--~~~~e~~dLI~~~L~~DP~ 783 (934)
||.+. ...|+.++||||||+.++||+|| ..||.. .++....++...++..+. .+++.+++|+..||++|+.
T Consensus 260 PERidp~~~~kYDiRaDVWSlGITlveLaTg-~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r 338 (391)
T KOG0983|consen 260 PERIDPPDKPKYDIRADVWSLGITLVELATG-QYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHR 338 (391)
T ss_pred ccccCCCCCCccchhhhhhhhccchhhhhcc-cCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcc
Confidence 99985 34689999999999999999996 677754 344444555544443332 2689999999999999999
Q ss_pred CCcCHHHHHcCCCCCCcc
Q 002343 784 LRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~ 801 (934)
+||...++|+|||+..-+
T Consensus 339 ~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 339 KRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred cCcchHHHhcCcceeecc
Confidence 999999999999986544
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=333.16 Aligned_cols=245 Identities=27% Similarity=0.397 Sum_probs=186.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEec--C---cEEEEEEeecCC--h----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE--G---RSVAVKRLVKTH--H----DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~--g---~~VAVK~l~~~~--~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
....+.+.||+|+||.||++.... + ..||||...... . ...++|. ++|..++|||||++||+..++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EA-rvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEA-RVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHH-HHHHhCCCCCEEEEEEEEcCCCc
Confidence 344556899999999999985543 2 238999987422 1 2344554 48889999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|||||+|. +|+|.++|... ...++..+...++.+.+.||+|
T Consensus 236 l~ivmEl~~----------gGsL~~~L~k~----------------------------~~~v~~~ek~~~~~~AA~Gl~Y 277 (474)
T KOG0194|consen 236 LMLVMELCN----------GGSLDDYLKKN----------------------------KKSLPTLEKLRFCYDAARGLEY 277 (474)
T ss_pred cEEEEEecC----------CCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHhHHHH
Confidence 999999665 45666665432 1236778889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++++|||||..+|+|++.++ .+||+|||||+.-..-..... .
T Consensus 278 Lh~k~~IHRDIAARNcL~~~~~--~vKISDFGLs~~~~~~~~~~~--~-------------------------------- 321 (474)
T KOG0194|consen 278 LHSKNCIHRDIAARNCLYSKKG--VVKISDFGLSRAGSQYVMKKF--L-------------------------------- 321 (474)
T ss_pred HHHCCCcchhHhHHHheecCCC--eEEeCccccccCCcceeeccc--c--------------------------------
Confidence 9999999999999999997655 389999999876431110000 0
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhccccc-ccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLF-LVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~-~~~~~~e~~dLI~~~L 778 (934)
.--...|+|||.+....|+.++|||||||++||+++.+..||......+ ..+........ +...+.++..++.+|+
T Consensus 322 -~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~ 400 (474)
T KOG0194|consen 322 -KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCW 400 (474)
T ss_pred -ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhc
Confidence 0123579999999999999999999999999999997777887654433 23324333333 3344567889999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
..||+.||++.++.+
T Consensus 401 ~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 401 KKDPEDRPTMSTIKK 415 (474)
T ss_pred cCChhhccCHHHHHH
Confidence 999999999999874
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=351.71 Aligned_cols=172 Identities=30% Similarity=0.506 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHh
Q 002343 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILL 684 (934)
Q Consensus 605 ~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (934)
....+++++||+.||+|+|++|||||||||.||+++.+++ |||+|||+|+..............
T Consensus 696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~--VKIGDFGLAt~~~~~~~~~d~~~~-------------- 759 (1351)
T KOG1035|consen 696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNS--VKIGDFGLATDLKENLESIDQDLS-------------- 759 (1351)
T ss_pred hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCC--eeecccccchhhhhhhhhHhhccC--------------
Confidence 5678999999999999999999999999999999986665 999999999873311000000000
Q ss_pred hhhhhccccccccceeecCCCCCccccchhcccCC---CcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccc
Q 002343 685 KLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761 (934)
Q Consensus 685 ~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~---~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~ 761 (934)
...........-.|..+||.-|+|||++.+.. |+.|+|+||||+||+||+. ||+...+|...+..-+...
T Consensus 760 ---~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y----PF~TsMERa~iL~~LR~g~ 832 (1351)
T KOG1035|consen 760 ---FSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY----PFGTSMERASILTNLRKGS 832 (1351)
T ss_pred ---ccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc----cCCchHHHHHHHHhcccCC
Confidence 00000011112345578999999999997654 9999999999999999985 6998888865544333222
Q ss_pred c------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 762 F------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 762 ~------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
. .....++...+|++||+.||++||||.|+|++.||-.
T Consensus 833 iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 833 IPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred CCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 2 2233467889999999999999999999999999953
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=309.44 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=186.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
..|.+...||+|+||+||++....+..||+|++..... +...+|+. +++.++||||+++++++. .+..|++||++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQ-IMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHH-HHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 45788889999999999998776677899998865432 34455655 788899999999999875 456899999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.... ...+++..+..++.|++.||+|||+.||+||
T Consensus 84 ----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 126 (260)
T cd05069 84 ----------KGSLLDFLKEGD---------------------------GKYLKLPQLVDMAAQIADGMAYIERMNYIHR 126 (260)
T ss_pred ----------CCCHHHHHhhCC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 444444443210 1235677889999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ .++|+|||+++.+......... ...++..|+
T Consensus 127 dl~~~Nill~~~~--~~~l~dfg~~~~~~~~~~~~~~----------------------------------~~~~~~~y~ 170 (260)
T cd05069 127 DLRAANILVGDNL--VCKIADFGLARLIEDNEYTARQ----------------------------------GAKFPIKWT 170 (260)
T ss_pred ccCcceEEEcCCC--eEEECCCccceEccCCcccccC----------------------------------CCccchhhC
Confidence 9999999996654 5999999999876432211000 023577899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||.+.+..++.++|||||||++|+|++++.+||....... ...+... ....+...+..+.+++.+||..||++||++
T Consensus 171 ~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 250 (260)
T cd05069 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTF 250 (260)
T ss_pred CHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence 99999988999999999999999999997788886643322 2222222 122233456789999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
+++++
T Consensus 251 ~~i~~ 255 (260)
T cd05069 251 EYIQS 255 (260)
T ss_pred HHHHH
Confidence 99874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=307.08 Aligned_cols=250 Identities=26% Similarity=0.337 Sum_probs=188.9
Q ss_pred eeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.||+|+||.||++.... +..||||.+..... +...+|+. ++..++|+||+++++++.+....+++||||.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEAR-VMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHH-HHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 469999999999985543 78999999976543 23445554 6777889999999999999999999999663
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++....... .......+++.++..++.|++.||+|||+++|+||
T Consensus 80 ----------~~~L~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 129 (262)
T cd00192 80 ----------GGDLLDYLRKSRPVF--------------------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHR 129 (262)
T ss_pred ----------CCcHHHHHhhccccc--------------------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 344444433210000 00002457889999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ .+||+|||.+............ ....++..|+
T Consensus 130 di~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~---------------------------------~~~~~~~~y~ 174 (262)
T cd00192 130 DLAARNCLVGEDL--VVKISDFGLSRDVYDDDYYRKK---------------------------------TGGKLPIRWM 174 (262)
T ss_pred ccCcceEEECCCC--cEEEcccccccccccccccccc---------------------------------cCCCcCcccc
Confidence 9999999997665 4999999999877653321100 1145788999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhh-cccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||.+....++.++|||||||++|+|+++|.+||...... ....+.. .....+...++++.+++.+||..||.+|||+
T Consensus 175 aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 254 (262)
T cd00192 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTF 254 (262)
T ss_pred CHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCH
Confidence 9999998889999999999999999999778888765332 2222222 2222334456899999999999999999999
Q ss_pred HHHHcC
Q 002343 789 QNVLNH 794 (934)
Q Consensus 789 ~evL~H 794 (934)
.++++|
T Consensus 255 ~~l~~~ 260 (262)
T cd00192 255 SELVER 260 (262)
T ss_pred HHHHHh
Confidence 999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=318.15 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=188.6
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESD 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~ 538 (934)
...+.|.+.+.||+|+||.||++... .+..||||++..... +...+|+. +++.+ +||||+++++++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELK-IMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHH-HHHhccCCCCcceEEEEEec
Confidence 34457889999999999999997532 345899999865432 23445665 66677 89999999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+..|++|||+ .+|+|.++++... ...+++.+++.++.||+.|
T Consensus 111 ~~~~~lv~e~~----------~~~~L~~~i~~~~---------------------------~~~l~~~~~~~i~~~i~~~ 153 (302)
T cd05055 111 GGPILVITEYC----------CYGDLLNFLRRKR---------------------------ESFLTLEDLLSFSYQVAKG 153 (302)
T ss_pred CCceEEEEEcC----------CCCcHHHHHHhCC---------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99999999954 4455555543210 1226788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||+++|+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 154 l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~------------------------------- 200 (302)
T cd05055 154 MAFLASKNCIHRDLAARNVLLTHGK--IVKICDFGLARDIMNDSNYVVK------------------------------- 200 (302)
T ss_pred HHHHHHCCeehhhhccceEEEcCCC--eEEECCCcccccccCCCceeec-------------------------------
Confidence 9999999999999999999996554 5899999999866443211100
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhc-ccccccCCCHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDR-KDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~-~~~~~~~~~~e~~dLI~ 775 (934)
....++..|+|||++.+..++.++|||||||++|+|++++.+||...... ........ ....+...++++.+|+.
T Consensus 201 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 278 (302)
T cd05055 201 --GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMK 278 (302)
T ss_pred --CCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 01236788999999999999999999999999999998557777553322 11222221 11222345689999999
Q ss_pred HcccCCCCCCcCHHHHHc
Q 002343 776 RLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~ 793 (934)
+||+.+|++|||+.++++
T Consensus 279 ~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 279 TCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHcCCCchhCcCHHHHHH
Confidence 999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=335.67 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=193.5
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEee------cCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCe--
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLV------KTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDF-- 541 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~------~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~-- 541 (934)
-|+..++..+||+|+|=|||+| +..+|..||--.++ ....-..+.++..|++.++|||||++|.++.+...
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence 3456677889999999999998 66778888843322 11112445555569999999999999999998665
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+-+|+| .+..|+|..|+.+ .+......++.+++||++||.|
T Consensus 118 in~iTE----------L~TSGtLr~Y~kk-----------------------------~~~vn~kaik~W~RQILkGL~y 158 (632)
T KOG0584|consen 118 INFITE----------LFTSGTLREYRKK-----------------------------HRRVNIKAIKSWCRQILKGLVY 158 (632)
T ss_pred eeeeee----------cccCCcHHHHHHH-----------------------------hccCCHHHHHHHHHHHHHHhhh
Confidence 788999 5556777766543 2334556789999999999999
Q ss_pred HHHC--CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 622 LHEI--GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 622 LHs~--gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
||++ .|||||||-+||+|+.+ ...|||+|+|||+.+.....
T Consensus 159 LHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl~r~s~a------------------------------------ 201 (632)
T KOG0584|consen 159 LHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATLLRKSHA------------------------------------ 201 (632)
T ss_pred hhcCCCCccccccccceEEEcCC-cCceeecchhHHHHhhcccc------------------------------------
Confidence 9987 49999999999999643 24699999999998765322
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HH-HHHhhcccccc-cCCCHHHHHHHH
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DA-NIVKDRKDLFL-VEHIPEAVDLFT 775 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~-~i~~~~~~~~~-~~~~~e~~dLI~ 775 (934)
...+|||.|||||+.. ..|+..+||||||++|+||+|+ ..||.+.... .. .+..+.++... .=..|++++||.
T Consensus 202 -ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~-eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIe 278 (632)
T KOG0584|consen 202 -KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTS-EYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIE 278 (632)
T ss_pred -ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhc-cCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHH
Confidence 1257999999999987 6899999999999999999995 8899875332 22 22333333222 123589999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+||.. ...|||+.|+|+||||...
T Consensus 279 kCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHhcC-chhccCHHHHhhChhhccc
Confidence 99999 9999999999999999765
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=324.43 Aligned_cols=254 Identities=24% Similarity=0.289 Sum_probs=181.1
Q ss_pred eeeccc--CcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKG--SNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~G--sfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
..||+| +||+||++.. .+|+.||||.+..... ...++++..+++.++||||+++++++..+++.|+|||||.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~- 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA- 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc-
Confidence 356666 9999999854 5799999999864332 1233333447788999999999999999999999999554
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
.|++.+++... ...++++..+..++.||+.||+|||++||+|||
T Consensus 83 ---------~~~l~~~l~~~---------------------------~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrD 126 (328)
T cd08226 83 ---------YGSANSLLKTY---------------------------FPEGMSEALIGNILFGALRGLNYLHQNGYIHRN 126 (328)
T ss_pred ---------CCCHHHHHHhh---------------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 44554444321 123467888999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .++++|||.+............... ......++..|+|
T Consensus 127 lkp~Nill~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~y~a 176 (328)
T cd08226 127 IKASHILISGDG--LVSLSGLSHLYSLVRNGQKAKVVYD----------------------------FPQFSTSVLPWLS 176 (328)
T ss_pred CCHHHEEEeCCC--cEEEechHHHhhhhccCcccccccc----------------------------ccccccCccCccC
Confidence 999999997665 4899999876543321110000000 0001235678999
Q ss_pred chhcccC--CCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcc----------------------------
Q 002343 712 PEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRK---------------------------- 759 (934)
Q Consensus 712 PE~l~~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~---------------------------- 759 (934)
||++.+. .++.++|||||||++|||++| .+||........ .......
T Consensus 177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd08226 177 PELLRQDLYGYNVKSDIYSVGITACELATG-RVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG 255 (328)
T ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence 9999764 478999999999999999996 778765432211 1111000
Q ss_pred ------------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 ------------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 ------------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.......++++.+||.+||+.||++|||+.++++||||...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 256 ESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred cchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 00011234678999999999999999999999999999543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=312.69 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=191.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
..|.+.+.||.|+||+||++....++.||+|.+..... ....+|+. +++.++||||+++++++.+.+..|+|||||
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQ-ALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHH-HHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 45777889999999999998777799999999875543 33455554 778889999999999999999999999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
+ +|+|.+++.... ...+++.+++.++.||+.||+|||++||+|
T Consensus 85 ~----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~~i~~al~~lH~~~i~h 127 (261)
T cd05148 85 E----------KGSLLAFLRSPE---------------------------GQVLPVASLIDMACQVAEGMAYLEEQNSIH 127 (261)
T ss_pred c----------cCCHHHHHhcCC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5 344444432210 123567788999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||++..+........ ...++..|
T Consensus 128 ~dl~~~nilv~~~~--~~kl~d~g~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 170 (261)
T cd05148 128 RDLAARNILVGEDL--VCKVADFGLARLIKEDVYLSS-----------------------------------DKKIPYKW 170 (261)
T ss_pred cccCcceEEEcCCc--eEEEccccchhhcCCcccccc-----------------------------------CCCCceEe
Confidence 99999999997665 499999999987643221110 12367789
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|+|++++.+||...... ... +........+...++++.++|.+||+.||.+|||
T Consensus 171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (261)
T cd05148 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPS 250 (261)
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 99999998899999999999999999999778888654322 222 2222222233456789999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.++++
T Consensus 251 ~~~l~~ 256 (261)
T cd05148 251 FKALRE 256 (261)
T ss_pred HHHHHH
Confidence 999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=315.64 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=189.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||.||++... ++..||+|.+..... +...+|+. +++.++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE-LLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHH-HHhcCCCCCcceEEEEEccCCceE
Confidence 34777899999999999997532 356799999865433 23455655 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+||||+. +|+|.+++.......... .+ .........+++..++.++.||+.||+|||
T Consensus 84 lv~e~~~----------~~~L~~~i~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 140 (291)
T cd05094 84 MVFEYMK----------HGDLNKFLRAHGPDAMIL----------VD---GQPRQAKGELGLSQMLHIASQIASGMVYLA 140 (291)
T ss_pred EEEecCC----------CCcHHHHHHhcCcccccc----------cc---cccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 444444443221100000 00 000001234688899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++........... +..
T Consensus 141 ~~~i~H~dlkp~Nil~~~~~--~~~l~dfg~a~~~~~~~~~~~~---------------------------------~~~ 185 (291)
T cd05094 141 SQHFVHRDLATRNCLVGANL--LVKIGDFGMSRDVYSTDYYRVG---------------------------------GHT 185 (291)
T ss_pred hCCeeecccCcceEEEccCC--cEEECCCCcccccCCCceeecC---------------------------------CCC
Confidence 99999999999999997655 5999999999865432211000 113
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-cccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.|+..|+|||++.+..++.++|||||||++|||++++..||..... .....+.. .........+.++.+++.+||+.|
T Consensus 186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 265 (291)
T cd05094 186 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQRE 265 (291)
T ss_pred CcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccC
Confidence 4788999999999999999999999999999999966778755332 22222222 122223345678999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||++.++++
T Consensus 266 P~~Rpt~~~v~~ 277 (291)
T cd05094 266 PQQRLNIKEIYK 277 (291)
T ss_pred hhhCcCHHHHHH
Confidence 999999999974
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=323.75 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=189.8
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
.+.++|.+.+.||+|+||+||++. ..+|+.||||++.+... ....+|+. +++.++||||+++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHH-HHHhcCCCCccceeeeecCCcccc
Confidence 356779999999999999999984 45789999999864322 23445655 788899999999999987654
Q ss_pred ---eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 541 ---~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..|+|||+++++|.+++. ...+++..++.++.||+.
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~-----------------------------------------~~~l~~~~~~~i~~qi~~ 129 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMK-----------------------------------------HEKLSEDRIQFLVYQMLK 129 (343)
T ss_pred ccceEEEEEecCCCCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 469999988666554431 234577889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||++........
T Consensus 130 al~~LH~~gi~H~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~---------------------------------- 173 (343)
T cd07880 130 GLKYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQTDSEMT---------------------------------- 173 (343)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCCC--CEEEeecccccccccCcc----------------------------------
Confidence 99999999999999999999997655 489999999976532110
Q ss_pred ceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhc----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDR---------------- 758 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~---------------- 758 (934)
...|++.|+|||++.+ ..++.++|||||||++|++++| .+||...... ...+....
T Consensus 174 ----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07880 174 ----GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG-KPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA 248 (343)
T ss_pred ----ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence 1347889999999876 4578999999999999999996 6677543211 11111100
Q ss_pred -------cc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 -------KD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 -------~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. ......++++.++|.+||+.||++|||+.+++.||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 00 0112345789999999999999999999999999999654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=330.78 Aligned_cols=245 Identities=23% Similarity=0.296 Sum_probs=180.5
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..+.+.+.+.||+|+||+||++..+. .||||.+.-... -++++.+...++.-+|.||+-+.|+|..... .||+
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred CHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 33445667889999999999954443 699999975432 2344444447888999999999999999887 9999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
.+|+| +|..++.+ . ...+....++.|++||++|+.|||.+
T Consensus 467 qwCeGsSLY~hlHv-----------~----------------------------etkfdm~~~idIAqQiaqGM~YLHAK 507 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHV-----------Q----------------------------ETKFDMNTTIDIAQQIAQGMDYLHAK 507 (678)
T ss_pred hhccCchhhhhccc-----------h----------------------------hhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence 99997 45544432 1 12234457889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|||||||..||++.+++ .|||+||||+..-..-.... ......|
T Consensus 508 ~IIHrDLKSnNIFl~~~~--kVkIgDFGLatvk~~w~g~~---------------------------------q~~qp~g 552 (678)
T KOG0193|consen 508 NIIHRDLKSNNIFLHEDL--KVKIGDFGLATVKTRWSGEQ---------------------------------QLEQPHG 552 (678)
T ss_pred hhhhhhccccceEEccCC--cEEEecccceeeeeeecccc---------------------------------ccCCCcc
Confidence 999999999999997664 59999999986432210000 0111347
Q ss_pred CCccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcc----ccc--ccCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK----DLF--LVEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~----~~~--~~~~~~e~~dLI~~ 776 (934)
...|||||+++. .+|++.+||||||||+|||+|| ..||........-.+..+. +.. ......++++|+..
T Consensus 553 silwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg-~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~ 631 (678)
T KOG0193|consen 553 SLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG-ELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSD 631 (678)
T ss_pred chhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC-cCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHH
Confidence 889999999974 4689999999999999999995 8899843332222222222 111 11233489999999
Q ss_pred cccCCCCCCcCHHHHHc
Q 002343 777 LLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~ 793 (934)
||..++++||.+.+||.
T Consensus 632 C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 632 CWKFDREERPLFPQLLS 648 (678)
T ss_pred HHhcCcccCccHHHHHH
Confidence 99999999999999885
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=313.91 Aligned_cols=244 Identities=25% Similarity=0.307 Sum_probs=180.6
Q ss_pred eEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~ 542 (934)
.|.+.+.||+|+||+||++. ..+++.||+|.+..... ....+|+. +++.++||||+++++++.. ....
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEIN-ILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCCceE
Confidence 34788999999999998742 24578999999865432 23455665 7888999999999998765 3468
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|++||+|. +|+|.+++. ...+++.+++.++.|++.||+||
T Consensus 84 ~lv~e~~~----------~~~l~~~~~------------------------------~~~l~~~~~~~i~~~l~~~l~~l 123 (283)
T cd05080 84 QLIMEYVP----------LGSLRDYLP------------------------------KHKLNLAQLLLFAQQICEGMAYL 123 (283)
T ss_pred EEEecCCC----------CCCHHHHHH------------------------------HcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999554 445544432 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++ .+||+|||+++.+.......... ..
T Consensus 124 H~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~--------------------------------~~ 169 (283)
T cd05080 124 HSQHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEYYRVR--------------------------------ED 169 (283)
T ss_pred HHCCeeccccChheEEEcCCC--cEEEeecccccccCCcchhhccC--------------------------------CC
Confidence 999999999999999997665 49999999998765432211000 01
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHH----------------HHhhcc-cccccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN----------------IVKDRK-DLFLVE 765 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~----------------i~~~~~-~~~~~~ 765 (934)
..++..|+|||++.+..++.++|||||||++|||++| ..|+......... ...... ...+..
T Consensus 170 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (283)
T cd05080 170 GDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH-CDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKN 248 (283)
T ss_pred CCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC-CCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCC
Confidence 2356789999999988899999999999999999996 5565432211110 000000 111233
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+.++.+++.+||+.||++|||++++++
T Consensus 249 ~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 249 CPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 4679999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=308.59 Aligned_cols=242 Identities=26% Similarity=0.371 Sum_probs=184.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEe-cCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVES-DQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~-~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||.||++ ...|+.||+|.+...... ...+|+. +++.++|+||+++++++. +++..|++|||+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~-~~~~~~~~~k~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLG-DYRGNKVAVKCIKNDATAQAFLAEAS-VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEE-EEcCCcEEEEEeCCCchHHHHHHHHH-HHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 35677899999999999986 445889999998655433 3445555 788899999999999754 5567999999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.... ...+++..++.++.||+.||+|||++||+||
T Consensus 84 ----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (256)
T cd05082 84 ----------KGSLVDYLRSRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEANNFVHR 126 (256)
T ss_pred ----------CCcHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence 445544443210 1235678889999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ ++||+|||+++....... ...++..|+
T Consensus 127 dlkp~nil~~~~~--~~kl~dfg~~~~~~~~~~--------------------------------------~~~~~~~y~ 166 (256)
T cd05082 127 DLAARNVLVSEDN--VAKVSDFGLTKEASSTQD--------------------------------------TGKLPVKWT 166 (256)
T ss_pred ccchheEEEcCCC--cEEecCCccceeccccCC--------------------------------------CCccceeec
Confidence 9999999997665 499999999876433211 023456899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|+|++.+..||..... .....+. ..........++++.++|.+||+.||++|||+
T Consensus 167 aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 246 (256)
T cd05082 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSF 246 (256)
T ss_pred CHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 999999888999999999999999999856778765432 2222222 22222334457899999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.++++
T Consensus 247 ~~l~~ 251 (256)
T cd05082 247 LQLRE 251 (256)
T ss_pred HHHHH
Confidence 99975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=306.24 Aligned_cols=246 Identities=23% Similarity=0.376 Sum_probs=188.5
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.|.+.+.||+|+||.||++...+++.+|+|.+..... +...+|++ +++.++||||+++++++......|++||||.
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~- 82 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQ-VMMKLSHPKLVQLYGVCTERSPICLVFEFME- 82 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHH-HHHhCCCCCeeeEEEEEccCCceEEEEEcCC-
Confidence 4667889999999999998777788999998865432 34556665 7788899999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++... ...++++.++.++.|++.||+|||+++|+|||
T Consensus 83 ---------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~d 125 (256)
T cd05112 83 ---------HGCLSDYLRAQ----------------------------RGKFSQETLLGMCLDVCEGMAYLESSNVIHRD 125 (256)
T ss_pred ---------CCcHHHHHHhC----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 34444443211 12356778899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||+++.++ .+||+|||+++.......... ....++.+|+|
T Consensus 126 l~p~ni~i~~~~--~~~l~d~g~~~~~~~~~~~~~----------------------------------~~~~~~~~~~a 169 (256)
T cd05112 126 LAARNCLVGENQ--VVKVSDFGMTRFVLDDQYTSS----------------------------------TGTKFPVKWSS 169 (256)
T ss_pred cccceEEEcCCC--eEEECCCcceeecccCccccc----------------------------------CCCccchhhcC
Confidence 999999996554 599999999976543211000 00235678999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||++.++.++.++|||||||++|||++.+.+||....... ...+... ....+...+.++.+|+.+||+.+|++|||+.
T Consensus 170 Pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 249 (256)
T cd05112 170 PEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFS 249 (256)
T ss_pred HhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 9999988999999999999999999996688887544322 2222211 2222333568899999999999999999999
Q ss_pred HHHcC
Q 002343 790 NVLNH 794 (934)
Q Consensus 790 evL~H 794 (934)
+++++
T Consensus 250 ~~l~~ 254 (256)
T cd05112 250 LLLHQ 254 (256)
T ss_pred HHHHh
Confidence 99864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=345.56 Aligned_cols=252 Identities=26% Similarity=0.383 Sum_probs=188.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEecC-cEEEEEEeecCCh---hHHHHHHHHHHHhC-CCCceeEEEEE-Eec------CC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVKTHH---DVALKEIQNLIASD-QHPNIVRWYGV-ESD------QD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g-~~VAVK~l~~~~~---~~~~~Ei~~ll~~l-~HpNIV~l~g~-~~~------~~ 540 (934)
.++.+.+.|.+|+|+.||++....+ ..||+|++..... ....+||. +|+.+ .|+|||.|++. ... .-
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~-~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREID-IMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHH-HHHHhcCCCceeeEeccccccccCCCcee
Confidence 3577889999999999999976665 9999999865532 34566776 55655 59999999993 221 13
Q ss_pred eEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
.++|.||||. ++|.|++.. + ...+|++.++++|+.|+++|+
T Consensus 116 EvllLmEyC~gg~Lvd~mn~-----------R---------------------------lq~~lte~eVLkIf~dv~~AV 157 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNT-----------R---------------------------LQTRLTEDEVLKIFYDVCEAV 157 (738)
T ss_pred EEEeehhhccCCcHHHHHHH-----------H---------------------------HhccCChHHHHHHHHHHHHHH
Confidence 5889999999 577777621 0 134589999999999999999
Q ss_pred HHHHHCC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 620 SHLHEIG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 620 ~yLHs~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
++||... |||||||-|||||+.+++ .||||||.|.-....... .-...++...+.
T Consensus 158 a~mH~~~pPiIHRDLKiENvLls~~g~--~KLCDFGSatt~~~~~~~--------~~e~~~ve~eI~------------- 214 (738)
T KOG1989|consen 158 AAMHYLKPPIIHRDLKIENVLLSADGN--YKLCDFGSATTKILSPTS--------AQEVNYVEEEIE------------- 214 (738)
T ss_pred HHHhcCCCccchhhhhhhheEEcCCCC--EEeCcccccccccCCCcc--------HHHHHHHHHHHH-------------
Confidence 9999987 999999999999988876 899999988643222110 001112222121
Q ss_pred ceeecCCCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccc-cCCCHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL-VEHIPEAVDL 773 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~-~~~~~e~~dL 773 (934)
..-|+.|+|||++. +...++|+|||+|||+||.|+. ..+||++.-. ..|+......++ +..+..+++|
T Consensus 215 -----k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy-~t~PFe~sg~--laIlng~Y~~P~~p~ys~~l~~L 286 (738)
T KOG1989|consen 215 -----KYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY-FTTPFEESGK--LAILNGNYSFPPFPNYSDRLKDL 286 (738)
T ss_pred -----hhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH-hCCCcCcCcc--eeEEeccccCCCCccHHHHHHHH
Confidence 23689999999984 5677999999999999999999 5899987521 223333332222 3567899999
Q ss_pred HHHcccCCCCCCcCHHHHHcC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~H 794 (934)
|..||+.||.+||++-+++.+
T Consensus 287 I~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 287 IRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHhccCcccCCCHHHHHHH
Confidence 999999999999999998754
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=312.92 Aligned_cols=248 Identities=23% Similarity=0.368 Sum_probs=188.2
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCC---CCceeEEEEEEecCCeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQ---HPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~---HpNIV~l~g~~~~~~~~yLVm 546 (934)
|...+.||+|+||.||++.. .+++.||||.+..... ....+|+. +++.++ ||||+++++++.++...|+||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVA-LLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHH-HHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 55678899999999999854 5789999999865422 23445655 555554 999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||+. +++|.+++. ...+++..++.++.|++.||.|||+.|
T Consensus 82 e~~~----------~~~L~~~~~------------------------------~~~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 82 EYAE----------GGSVRTLMK------------------------------AGPIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred ecCC----------CCcHHHHHH------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9654 344444332 124577888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||+|+||+++.++ .++|+|||++..+....... ....|+
T Consensus 122 i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~ 164 (277)
T cd06917 122 VIHRDIKAANILVTNTG--NVKLCDFGVAALLNQNSSKR-----------------------------------STFVGT 164 (277)
T ss_pred cccCCcCHHHEEEcCCC--CEEEccCCceeecCCCcccc-----------------------------------ccccCC
Confidence 99999999999997655 48999999998765432110 013588
Q ss_pred CccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhh-ccccccc-CCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKD-RKDLFLV-EHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~-~~~~~~~-~~~~e~~dLI~~~L~~DP 782 (934)
..|+|||.+.++ .++.++|||||||++|+|++| .+||........ ..... ....... ....++.+++.+||+.||
T Consensus 165 ~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 243 (277)
T cd06917 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATG-NPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEP 243 (277)
T ss_pred cceeCHHHhccCCccccchhHHHHHHHHHHHHhC-CCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCc
Confidence 999999998754 468999999999999999995 778765432211 11111 1111112 256789999999999999
Q ss_pred CCCcCHHHHHcCCCCCCcc
Q 002343 783 DLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~ 801 (934)
++||++.+++.||||....
T Consensus 244 ~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 244 KERLSAEELLKSKWIKAHS 262 (277)
T ss_pred ccCcCHHHHhhChHhhccc
Confidence 9999999999999995543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=312.95 Aligned_cols=246 Identities=22% Similarity=0.300 Sum_probs=181.2
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCc----EEEEEEeecCChhHHHHHHH---HHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGR----SVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~----~VAVK~l~~~~~~~~~~Ei~---~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.|.+.+.||+|+||+||++... +++ .||+|.+..........++. ..++.++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 4666789999999999997543 444 47888775433222222222 25678899999999998764 567889
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
+| +..+|+|.+++... ...+++..++.++.||+.||+|||++
T Consensus 87 ~e----------~~~~gsL~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (279)
T cd05111 87 TQ----------LSPLGSLLDHVRQH----------------------------RDSLDPQRLLNWCVQIAKGMYYLEEH 128 (279)
T ss_pred EE----------eCCCCcHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99 45556666655421 23467788999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|+||||||+|||++.++ .+||+|||+++.+........ .+...|
T Consensus 129 ~iiH~dlkp~nili~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------------~~~~~~ 173 (279)
T cd05111 129 RMVHRNLAARNILLKSDS--IVQIADFGVADLLYPDDKKYF---------------------------------YSEHKT 173 (279)
T ss_pred CEeccccCcceEEEcCCC--cEEEcCCccceeccCCCcccc---------------------------------cCCCCC
Confidence 999999999999996554 589999999987654321111 011347
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhccccc-ccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~-~~~~~~e~~dLI~~~L~~DP~ 783 (934)
+..|+|||++.++.++.++|||||||++||+++.+..||..... ....++....... +.....++.+++.+||..||+
T Consensus 174 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~ 253 (279)
T cd05111 174 PIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDEN 253 (279)
T ss_pred cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 78899999999889999999999999999999855777765433 2233333222222 223456889999999999999
Q ss_pred CCcCHHHHHc
Q 002343 784 LRPKAQNVLN 793 (934)
Q Consensus 784 ~RPTa~evL~ 793 (934)
+|||+.|+++
T Consensus 254 ~Rps~~el~~ 263 (279)
T cd05111 254 VRPTFKELAN 263 (279)
T ss_pred cCcCHHHHHH
Confidence 9999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=308.73 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=178.5
Q ss_pred eeecccCcEEEEEEEEe----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEe-cCCeEEEEEecc
Q 002343 479 KEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVES-DQDFVYLSLERC 549 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~-~~~~~yLVmE~c 549 (934)
+.||+|+||+||++... .+..||+|++..... +...+|+. +++.++||||+++++++. .++..|++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~- 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGI-IMKDFSHPNVLSLLGICLPSEGSPLVVLPY- 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHH-HHccCCCCCcceEEEEeecCCCCcEEEEec-
Confidence 36899999999998543 245799999854322 23345554 778899999999999765 45678999994
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
..+|+|.+++... ....++..++.++.||+.||+|||+.+|+|
T Consensus 79 ---------~~~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 121 (262)
T cd05058 79 ---------MKHGDLRNFIRSE----------------------------THNPTVKDLIGFGLQVAKGMEYLASKKFVH 121 (262)
T ss_pred ---------CCCCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4455555555321 112345567889999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.+........... ....++..|
T Consensus 122 ~dlk~~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~y 168 (262)
T cd05058 122 RDLAARNCMLDESF--TVKVADFGLARDIYDKEYYSVHNH-------------------------------TGAKLPVKW 168 (262)
T ss_pred cccCcceEEEcCCC--cEEECCccccccccCCcceeeccc-------------------------------ccCcCCccc
Confidence 99999999997655 489999999986543221110000 013467789
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||.+.+..++.++|||||||++|||++|+.+||........ ..............++.+.+++.+||..+|++||+
T Consensus 169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 248 (262)
T cd05058 169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPT 248 (262)
T ss_pred cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCC
Confidence 9999998889999999999999999999988888865433221 22222222222334678999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.++++
T Consensus 249 ~~~il~ 254 (262)
T cd05058 249 FSELVS 254 (262)
T ss_pred HHHHHH
Confidence 999986
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=315.02 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=186.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-----------------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-----------------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVR 531 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-----------------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~ 531 (934)
+.|.+.+.||+|+||.||++... .+..||+|.+..... +...+|++ ++..++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~ 83 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK-ILSRLSDPNIAR 83 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHH-HHHhcCCCCEeE
Confidence 45777899999999999987432 235699999875542 23345655 778889999999
Q ss_pred EEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHH
Q 002343 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (934)
Q Consensus 532 l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 611 (934)
+++++.+++..+++||++. +++|.+++......... .......+++..++.+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~----------~~~L~~~l~~~~~~~~~------------------~~~~~~~~~~~~~~~~ 135 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYME----------NGDLNQFLQKHVAETSG------------------LACNSKSLSFSTLLYM 135 (296)
T ss_pred EEEEEecCCCcEEEEecCC----------CCCHHHHHHhccccccc------------------ccccCCCCCHHHHHHH
Confidence 9999999999999999654 34444444322100000 0011235788999999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 612 ~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
+.|++.||+|||++||+||||||+|||++.++ .++|+|||+++.+.........
T Consensus 136 ~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~------------------------ 189 (296)
T cd05051 136 ATQIASGMRYLESLNFVHRDLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYRVQ------------------------ 189 (296)
T ss_pred HHHHHHHHHHHHHcCccccccchhceeecCCC--ceEEccccceeecccCcceeec------------------------
Confidence 99999999999999999999999999997664 4899999999865433211110
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcC-CCCCCCCchhHH--HHHHhh-----cc--cc
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG-GKHPYGESFERD--ANIVKD-----RK--DL 761 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltG-g~~Pf~~~~~~~--~~i~~~-----~~--~~ 761 (934)
....+++.|+|||++.+..++.++|||||||++|||+++ +..||....... .+.... .. ..
T Consensus 190 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (296)
T cd05051 190 ---------GRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLP 260 (296)
T ss_pred ---------CcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCC
Confidence 013467899999999988899999999999999999984 467776533222 111111 00 11
Q ss_pred cccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 762 FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 762 ~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+...+.++.+||.+||+.||++|||+.++++
T Consensus 261 ~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 261 RPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 12234579999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=307.22 Aligned_cols=248 Identities=29% Similarity=0.434 Sum_probs=192.7
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.|.+.+.||+|++|.||++... +++.||||++..... ....+|+. .+..++||||+++++++...+..|+|||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELK-TLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHH-HHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 3667789999999999998554 599999999876542 33455555 66778899999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCC
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGL 627 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gI 627 (934)
|. +++|.+++.. ...+++..++.++.|++.||+|||+ .++
T Consensus 81 ~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~~~ 121 (264)
T cd06623 81 MD----------GGSLADLLKK-----------------------------VGKIPEPVLAYIARQILKGLDYLHTKRHI 121 (264)
T ss_pred cC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 65 3444444321 1346778899999999999999999 999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||+|+||+++.++ .++|+|||++..+....... ....|+.
T Consensus 122 ~H~~l~~~ni~~~~~~--~~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~~ 164 (264)
T cd06623 122 IHRDIKPSNLLINSKG--EVKIADFGISKVLENTLDQC-----------------------------------NTFVGTV 164 (264)
T ss_pred ccCCCCHHHEEECCCC--CEEEccCccceecccCCCcc-----------------------------------cceeecc
Confidence 9999999999997655 48999999998765432211 0134788
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----hH-HHHHHhhcccccccC-CCHHHHHHHHHcccCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----ER-DANIVKDRKDLFLVE-HIPEAVDLFTRLLDPN 781 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~-~~~i~~~~~~~~~~~-~~~e~~dLI~~~L~~D 781 (934)
.|+|||.+....++.++|||||||++|+|++| .+||.... .. ...+........... .+..+.++|.+||..+
T Consensus 165 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 243 (264)
T cd06623 165 TYMSPERIQGESYSYAADIWSLGLTLLECALG-KFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKD 243 (264)
T ss_pred cccCHhhhCCCCCCchhhHHHHHHHHHHHHhC-CCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCC
Confidence 99999999988899999999999999999996 67775542 11 112222222222223 5678999999999999
Q ss_pred CCCCcCHHHHHcCCCCCC
Q 002343 782 PDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~ 799 (934)
|++||++.++++||||..
T Consensus 244 p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 244 PKKRPSAAELLQHPFIKK 261 (264)
T ss_pred hhhCCCHHHHHhCHHHHh
Confidence 999999999999999954
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=316.26 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=188.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
+..+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|++ +++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~-~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIK-ILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHH-HHHhCCCCCeeeeeheecCcchhh
Confidence 3446678889999999999999865 4589999999864321 23345655 778889999999999987655
Q ss_pred -------eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 541 -------FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 541 -------~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
.+|+|+|+|++++.+++.. ....+++.+++.++.
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~---------------------------------------~~~~~~~~~~~~i~~ 123 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLES---------------------------------------GLVHFSEDHIKSFMK 123 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhc---------------------------------------CCCCCCHHHHHHHHH
Confidence 8999999887765544311 013467888999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
||+.||+|||+.||+||||||+||+++.++ .+||+|||++..+........
T Consensus 124 qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~~~~~~--------------------------- 174 (302)
T cd07864 124 QLLEGLNYCHKKNFLHRDIKCSNILLNNKG--QIKLADFGLARLYNSEESRPY--------------------------- 174 (302)
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEECCCC--cEEeCcccccccccCCccccc---------------------------
Confidence 999999999999999999999999996655 599999999987654321100
Q ss_pred ccccceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhh--cc-c-------
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKD--RK-D------- 760 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~--~~-~------- 760 (934)
....++..|+|||++.+. .++.++|||||||++|+|++| .+||...... .. .+... .. .
T Consensus 175 -------~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (302)
T cd07864 175 -------TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK-KPIFQANQELAQLELISRLCGSPCPAVWPDVI 246 (302)
T ss_pred -------ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChhhccccc
Confidence 012467889999988654 468999999999999999996 7777643221 11 11110 00 0
Q ss_pred -------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 -------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 -------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......++++.+||.+||+.||.+||++.+++.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 247 KLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0011245789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=318.16 Aligned_cols=249 Identities=26% Similarity=0.404 Sum_probs=191.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
++|.+.+.||+|+||+||++.. .+++.||+|.+..... +...+|+. +++.++||||+++++++...+..|+|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~-~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEIL-VMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHH-HHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 5678889999999999999854 5688999999854322 23455655 77888999999999999999999999995
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+ .+|+|.+++. ...+++.++..++.|++.||.|||++||+
T Consensus 98 ~----------~~~~L~~~~~------------------------------~~~l~~~~~~~i~~~l~~al~~LH~~gi~ 137 (293)
T cd06647 98 L----------AGGSLTDVVT------------------------------ETCMDEGQIAAVCRECLQALEFLHSNQVI 137 (293)
T ss_pred C----------CCCcHHHHHh------------------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 5 4455554442 12356778889999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||++.......... ....|++.
T Consensus 138 H~dL~p~Nili~~~~--~~kL~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~ 180 (293)
T cd06647 138 HRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR-----------------------------------STMVGTPY 180 (293)
T ss_pred eccCCHHHEEEcCCC--CEEEccCcceeccccccccc-----------------------------------ccccCChh
Confidence 999999999997665 48999999987654322110 01358899
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhccccc--ccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLF--LVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~~~--~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+|||.+.+..++.++|||||||++|++++| .+||........ .+........ ....+.++.++|.+||+.+|.+
T Consensus 181 y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 259 (293)
T cd06647 181 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEK 259 (293)
T ss_pred hcCchhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhh
Confidence 9999999888899999999999999999996 677764332211 1111111111 1223568999999999999999
Q ss_pred CcCHHHHHcCCCCCCc
Q 002343 785 RPKAQNVLNHPFFWTA 800 (934)
Q Consensus 785 RPTa~evL~HPff~~~ 800 (934)
||++.+++.||||...
T Consensus 260 Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 260 RGSAKELLQHPFLKIA 275 (293)
T ss_pred CcCHHHHhcCHHHhcC
Confidence 9999999999999654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=309.09 Aligned_cols=251 Identities=30% Similarity=0.431 Sum_probs=187.9
Q ss_pred ecccCcEEEEEEEEe-cCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 481 IAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 481 IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
||+|+||+||++... +|+.||+|++..... +...+|+. ++..++||||+++++.+.+++..|++||+|.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~--- 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERD-ILSQAQSPYVVKLYYSFQGKKNLYLVMEYLP--- 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHH-HHHhCCCcchhHHHHheecCcEEEEEEecCC---
Confidence 689999999998654 589999999865432 23344444 7788899999999999999999999999654
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||+
T Consensus 77 -------~~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 77 -------GGDLASLLEN-----------------------------VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 3444444321 1246778899999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+||+++.++. ++|+|||++............. +........++..|+|||
T Consensus 121 ~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~Pe 171 (265)
T cd05579 121 PDNILIDSNGH--LKLTDFGLSKVGLVRRQINLND---------------------------DEKEDKRIVGTPDYIAPE 171 (265)
T ss_pred HHHeEEcCCCC--EEEEecccchhcccCccccccc---------------------------ccccccCcccCccccCHH
Confidence 99999977664 8999999987654322110000 000011145788999999
Q ss_pred hcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccccCC--CHHHHHHHHHcccCCCCCCcCH--
Q 002343 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEH--IPEAVDLFTRLLDPNPDLRPKA-- 788 (934)
Q Consensus 714 ~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~~~--~~e~~dLI~~~L~~DP~~RPTa-- 788 (934)
.+.+..++.++|||||||++|++++| ..||...... ....+.......+... ++++.++|.+||+.+|++|||+
T Consensus 172 ~~~~~~~~~~~Dv~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (265)
T cd05579 172 VILGQGHSKTVDWWSLGCILYEFLVG-IPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKS 250 (265)
T ss_pred HhcCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCcc
Confidence 99988899999999999999999996 6677544332 2222222222222222 6899999999999999999999
Q ss_pred -HHHHcCCCCCCcc
Q 002343 789 -QNVLNHPFFWTAD 801 (934)
Q Consensus 789 -~evL~HPff~~~~ 801 (934)
.++|+||||.+.+
T Consensus 251 ~~~~l~~~~~~~~~ 264 (265)
T cd05579 251 IEEIKNHPFFKGID 264 (265)
T ss_pred HHHHhcCccccCCC
Confidence 9999999997543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=308.64 Aligned_cols=236 Identities=23% Similarity=0.302 Sum_probs=177.5
Q ss_pred eeecccCcEEEEEEEEec-C----------cEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 479 KEIAKGSNGTVVLEGNYE-G----------RSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~-g----------~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
+.||+|+||.||++.... + ..||+|.+..... ...+.++..+++.++||||+++++++.. ...|+||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 368999999999985543 3 3588888765443 2333344447889999999999999988 7889999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||. +|+|.+++... ...+++..+..++.||+.||+|||++|
T Consensus 80 e~~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~ 121 (259)
T cd05037 80 EYVK----------FGPLDVFLHRE----------------------------KNNVSLHWKLDVAKQLASALHYLEDKK 121 (259)
T ss_pred EcCC----------CCcHHHHHHhh----------------------------ccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 9554 45555554321 124677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCC-----ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 627 LIHRDLKPQNVLISKDKS-----FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~-----~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|+||||||+|||++.++. ..+||+|||+++.+....
T Consensus 122 i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------- 162 (259)
T cd05037 122 LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE--------------------------------------- 162 (259)
T ss_pred eecccCccceEEEecCccccCCceeEEeCCCCccccccccc---------------------------------------
Confidence 999999999999976552 158999999998654311
Q ss_pred cCCCCCccccchhcccC--CCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...++..|+|||++.+. .++.++|||||||++|+|++|+..|+....... ....... ...+.....++.++|.+||
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l 241 (259)
T cd05037 163 ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPMPDCAELANLINQCW 241 (259)
T ss_pred ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCCCCchHHHHHHHHHh
Confidence 03467789999999876 789999999999999999998788886653221 1222211 1112223478999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
..+|.+|||+.++++
T Consensus 242 ~~~p~~Rpt~~~il~ 256 (259)
T cd05037 242 TYDPTKRPSFRAILR 256 (259)
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=313.55 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=190.1
Q ss_pred EEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~ 542 (934)
|.+.+.||+|+||.||.+.. .+|+.||+|++..... +...+|++ ++..+ +|+||+++++++..+...
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQ-VLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHH-HHHhcccCCChhceeeEeecCCeE
Confidence 56788999999999999754 3689999999864321 23445665 55555 799999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||. +|+|.+++.. ...+++..+..++.||+.||+||
T Consensus 81 ~lv~e~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~al~~l 121 (290)
T cd05613 81 HLILDYIN----------GGELFTHLSQ-----------------------------RERFKEQEVQIYSGEIVLALEHL 121 (290)
T ss_pred EEEEecCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999554 4555555432 23457788899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.......... ..
T Consensus 122 H~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~----------------------------------~~ 165 (290)
T cd05613 122 HKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFHEDEVERA----------------------------------YS 165 (290)
T ss_pred HhCCeeccCCCHHHeEECCCC--CEEEeeCccceeccccccccc----------------------------------cc
Confidence 999999999999999997665 599999999987543221110 01
Q ss_pred CCCCCccccchhcccC--CCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccccccCCCHHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~~~~~~~~e~~dLI~ 775 (934)
..|+..|+|||.+.+. .++.++|||||||++|+|++| ..||.... ......+.......+....+.+.+|+.
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 244 (290)
T cd05613 166 FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG-ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQ 244 (290)
T ss_pred ccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC-CCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 3588999999998753 468899999999999999996 66775321 111222222223334456788999999
Q ss_pred HcccCCCCCCc-----CHHHHHcCCCCCCccc
Q 002343 776 RLLDPNPDLRP-----KAQNVLNHPFFWTADT 802 (934)
Q Consensus 776 ~~L~~DP~~RP-----Ta~evL~HPff~~~~~ 802 (934)
+||+.||++|| ++++++.||||....+
T Consensus 245 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 276 (290)
T cd05613 245 RLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276 (290)
T ss_pred HHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence 99999999997 8999999999976543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=314.35 Aligned_cols=249 Identities=26% Similarity=0.332 Sum_probs=183.4
Q ss_pred ceEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC--Ce
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~ 541 (934)
+.|.+.+.||+|+||.||++. ..+++.||+|.+..... ....+|++ +++.++||||+++++++.+. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE-ILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHH-HHHhCCCCCeeeeeeEEecCCCCc
Confidence 346778899999999999874 24578999999864432 23455665 78889999999999998875 67
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+||||+ ++|+|.+++... ...+++.++..++.||+.||+|
T Consensus 83 ~~lv~e~~----------~g~~L~~~l~~~----------------------------~~~~~~~~~~~i~~~i~~aL~~ 124 (284)
T cd05079 83 IKLIMEFL----------PSGSLKEYLPRN----------------------------KNKINLKQQLKYAVQICKGMDY 124 (284)
T ss_pred eEEEEEcc----------CCCCHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 99999955 445555544321 1235778889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++. +||+|||+++.+.......... .
T Consensus 125 lH~~gi~H~dlkp~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~--------------------------------~ 170 (284)
T cd05079 125 LGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIETDKEYYTVK--------------------------------D 170 (284)
T ss_pred HHHCCeeecccchheEEEcCCCC--EEECCCccccccccCccceeec--------------------------------C
Confidence 99999999999999999976654 8999999998765432211000 0
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc---------------hhHHHHHHhhc-ccccccC
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES---------------FERDANIVKDR-KDLFLVE 765 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~---------------~~~~~~i~~~~-~~~~~~~ 765 (934)
...|+..|+|||++.+..++.++|||||||++|||++++.+.+... .......+... .......
T Consensus 171 ~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (284)
T cd05079 171 DLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPN 250 (284)
T ss_pred CCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCC
Confidence 1346778999999998889999999999999999999643322110 01111111111 1112334
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
.+.++.+||.+||+.||++|||+++++++
T Consensus 251 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 251 CPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 56899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=317.31 Aligned_cols=265 Identities=23% Similarity=0.329 Sum_probs=191.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEE--------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~--------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~ 537 (934)
....|.+.+.||+|+||.||++.. .++..||+|.+..... ....+|+. ++..+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGACT 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHH-HHHhhccCCCchheeEEEe
Confidence 345678889999999999998743 1345899999864322 23455665 56666 8999999999999
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..+..|++||||. +|+|.+++.......... ..+........+++.+++.++.||+.
T Consensus 92 ~~~~~~lv~e~~~----------~~~L~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~qi~~ 148 (304)
T cd05101 92 QDGPLYVIVEYAS----------KGNLREYLRARRPPGMEY-------------SYDIARVPDEQMTFKDLVSCTYQVAR 148 (304)
T ss_pred cCCceEEEEecCC----------CCcHHHHHHhcCCccccc-------------ccccccCCcccccHHHHHHHHHHHHH
Confidence 9999999999654 444444443321110000 00000011245788889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 149 al~~LH~~givH~dlkp~Nili~~~~--~~kl~D~g~~~~~~~~~~~~~~------------------------------ 196 (304)
T cd05101 149 GMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLARDVNNIDYYKKT------------------------------ 196 (304)
T ss_pred HHHHHHHCCeeecccccceEEEcCCC--cEEECCCccceecccccccccc------------------------------
Confidence 99999999999999999999997655 5899999999876543221100
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcc-cccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRK-DLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~-~~~~~~~~~e~~dLI~ 775 (934)
....+++.|+|||++.+..++.++|||||||++|+|++++..||... .......+.... ...+...+.++.+||.
T Consensus 197 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (304)
T cd05101 197 ---TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 273 (304)
T ss_pred ---cCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 01346788999999998889999999999999999999667777543 333333333222 2223445689999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||..+|++||++.++++.
T Consensus 274 ~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 274 DCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHcccChhhCCCHHHHHHH
Confidence 9999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=325.13 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=190.6
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe--
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDF-- 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~-- 541 (934)
.+++.|.+.+.||+|++|+||++.. .+++.||||++.... .....+|+. +++.++||||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELR-LLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHH-HHHhccCCCHHHHHHHhhcccccc
Confidence 4567799999999999999999855 468899999986432 133456766 6778899999999998776554
Q ss_pred ----EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 542 ----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 542 ----~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.|+|+|+++++|.+++. ...+++.+++.++.||+.
T Consensus 91 ~~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~l~~~~~~~~~~ql~~ 129 (343)
T cd07851 91 DFQDVYLVTHLMGADLNNIVK-----------------------------------------CQKLSDDHIQFLVYQILR 129 (343)
T ss_pred ccccEEEEEecCCCCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 99999988766655542 234677889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||+.||+||||||+||+++.++ .+||+|||++........
T Consensus 130 aL~~LH~~gi~H~dlkp~Nill~~~~--~~kL~dfg~~~~~~~~~~---------------------------------- 173 (343)
T cd07851 130 GLKYIHSAGIIHRDLKPSNIAVNEDC--ELKILDFGLARHTDDEMT---------------------------------- 173 (343)
T ss_pred HHHHHHHCCeecCCCCHHHeEECCCC--CEEEcccccccccccccc----------------------------------
Confidence 99999999999999999999997665 499999999976533210
Q ss_pred ceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhhcc---------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKDRK--------------- 759 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~~~--------------- 759 (934)
...+|..|+|||.+.+. .++.++|||||||++|+|++| .+||..... .. ..+.....
T Consensus 174 ----~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 174 ----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-KTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred ----CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 13578899999998653 678999999999999999996 666643321 11 11111000
Q ss_pred --------c-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 760 --------D-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 760 --------~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
. ......++++.+||.+||+.||++|||+.+|++||||....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccC
Confidence 0 00112467899999999999999999999999999996543
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=304.96 Aligned_cols=240 Identities=26% Similarity=0.389 Sum_probs=183.0
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChh
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
+.||+|+||.||++...+++.||+|.+...... ...+|+. +++.++||||+++++++...+..|+|||||.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~---- 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEAR-ILKQYDHPNIVKLIGVCTQRQPIYIVMELVP---- 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHH-HHHhCCCCCcCeEEEEEecCCccEEEEECCC----
Confidence 368999999999987778899999998654322 3345555 7788899999999999999999999999665
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKP 634 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP 634 (934)
+|+|.+++... ...+++.+++.++.|++.||.|||++|++||||||
T Consensus 76 ------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p 121 (250)
T cd05085 76 ------GGDFLSFLRKK----------------------------KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA 121 (250)
T ss_pred ------CCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCh
Confidence 34444443221 12346778899999999999999999999999999
Q ss_pred CeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchh
Q 002343 635 QNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714 (934)
Q Consensus 635 ~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~ 714 (934)
+||+++.++ .+||+|||++........... . ...++..|+|||+
T Consensus 122 ~nili~~~~--~~~l~d~g~~~~~~~~~~~~~--~--------------------------------~~~~~~~y~aPE~ 165 (250)
T cd05085 122 RNCLVGENN--VLKISDFGMSRQEDDGIYSSS--G--------------------------------LKQIPIKWTAPEA 165 (250)
T ss_pred heEEEcCCC--eEEECCCccceeccccccccC--C--------------------------------CCCCcccccCHHH
Confidence 999997655 489999999875433211100 0 0235678999999
Q ss_pred cccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHH
Q 002343 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 715 l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL 792 (934)
+.+..++.++|||||||++|++++.+..||....... ...+... ....+...+.++.+++.+||+.+|++||++.+++
T Consensus 166 ~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 245 (250)
T cd05085 166 LNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQ 245 (250)
T ss_pred hccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 9988899999999999999999996677886543222 2222222 2223345568999999999999999999999997
Q ss_pred c
Q 002343 793 N 793 (934)
Q Consensus 793 ~ 793 (934)
+
T Consensus 246 ~ 246 (250)
T cd05085 246 K 246 (250)
T ss_pred H
Confidence 5
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=306.31 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=188.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.|.+.+.||+|+||.||++....+..||+|.+..... +...+|+. +++.++|+||+++++++.+ ...|++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEAN-VMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHH-HHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 4567889999999999999998777778899998865432 33455655 7888999999999999887 788999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+. +|+|.+++.... ...+++..++.++.||+.||+|||+.|++
T Consensus 82 ~~----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 124 (260)
T cd05073 82 MA----------KGSLLDFLKSDE---------------------------GSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124 (260)
T ss_pred CC----------CCcHHHHHHhCC---------------------------ccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 54 344444443210 12346677889999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||++..+......... ...++..
T Consensus 125 H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~~----------------------------------~~~~~~~ 168 (260)
T cd05073 125 HRDLRAANILVSASL--VCKIADFGLARVIEDNEYTARE----------------------------------GAKFPIK 168 (260)
T ss_pred ccccCcceEEEcCCC--cEEECCCcceeeccCCCccccc----------------------------------CCccccc
Confidence 999999999996654 5999999999866432211000 0235678
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhccc-ccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKD-LFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~-~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++....++.++|||||||++|+++++|.+||...... ....+..... ......+.++.+++.+||+.+|++||
T Consensus 169 y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 248 (260)
T cd05073 169 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 248 (260)
T ss_pred ccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCc
Confidence 999999998889999999999999999999778888654332 2222222221 22344567899999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
++.++++
T Consensus 249 ~~~~l~~ 255 (260)
T cd05073 249 TFEYIQS 255 (260)
T ss_pred CHHHHHH
Confidence 9998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=306.62 Aligned_cols=240 Identities=27% Similarity=0.384 Sum_probs=180.7
Q ss_pred eeecccCcEEEEEEEEe-c---CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGNY-E---GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~-~---g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
++||+|+||.||++... . +..||+|.+..... +...+|++ +++.+.|||||++++++. .+..++|||+|.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREAS-VMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHH-HHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 47999999999997432 2 36899999875543 23445555 778889999999999876 456899999554
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.. ...+++..++.++.|++.||+|||+.+|+||
T Consensus 79 ----------~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 119 (257)
T cd05060 79 ----------LGPLLKYLKK-----------------------------RREIPVSDLKELAHQVAMGMAYLESKHFVHR 119 (257)
T ss_pred ----------CCcHHHHHHh-----------------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 4445444432 1235778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++.+........... ...++..|+
T Consensus 120 di~p~nili~~~~--~~kl~df~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~y~ 165 (257)
T cd05060 120 DLAARNVLLVNRH--QAKISDFGMSRALGAGSDYYRATT--------------------------------AGRWPLKWY 165 (257)
T ss_pred CcccceEEEcCCC--cEEeccccccceeecCCccccccc--------------------------------Ccccccccc
Confidence 9999999997665 489999999987654332111000 123456899
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||.+.+..++.++|||||||++|++++++.+||....... ...+... ....+...++.++++|.+||..||++||++
T Consensus 166 aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~ 245 (257)
T cd05060 166 APECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTF 245 (257)
T ss_pred CHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 99999988999999999999999999986688887654332 2222222 222334456889999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.++++
T Consensus 246 ~~l~~ 250 (257)
T cd05060 246 SELES 250 (257)
T ss_pred HHHHH
Confidence 99875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=310.70 Aligned_cols=246 Identities=30% Similarity=0.435 Sum_probs=184.7
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHH--HHHhCCCCceeEEEEEEecCCe-----
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQN--LIASDQHPNIVRWYGVESDQDF----- 541 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~--ll~~l~HpNIV~l~g~~~~~~~----- 541 (934)
|.+.+.||+|+||.||++... +++.||||++..... ....+|+.. .++.++||||+++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456789999999999998654 589999999864322 123345442 2344579999999999988776
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|++||+|.++|.+++.. . ....+++.+++.++.||+.||+|
T Consensus 81 ~~l~~e~~~~~l~~~l~~-----------~---------------------------~~~~l~~~~~~~~~~~i~~al~~ 122 (287)
T cd07838 81 LTLVFEHVDQDLATYLSK-----------C---------------------------PKPGLPPETIKDLMRQLLRGVDF 122 (287)
T ss_pred eEEEehhcccCHHHHHHH-----------c---------------------------cCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999877665554421 0 01246788999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+.+|+|+||||+||+++.++ ++||+|||++..+.......
T Consensus 123 LH~~~i~h~~l~~~nili~~~~--~~~l~dfg~~~~~~~~~~~~------------------------------------ 164 (287)
T cd07838 123 LHSHRIVHRDLKPQNILVTSDG--QVKIADFGLARIYSFEMALT------------------------------------ 164 (287)
T ss_pred HHHCCeeeccCChhhEEEccCC--CEEEeccCcceeccCCcccc------------------------------------
Confidence 9999999999999999997664 59999999998764332110
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc--------------------
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK-------------------- 759 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~-------------------- 759 (934)
...|+..|+|||++.+..++.++|||||||++|+|++| .+||....... ..+.....
T Consensus 165 ~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T cd07838 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR-RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPS 243 (287)
T ss_pred cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC-CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccc
Confidence 13478899999999998999999999999999999996 77775432211 11111000
Q ss_pred --cc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 --DL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 --~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.. .....++++.++|.+||+.||.+||++.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 244 YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00 001224678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=323.64 Aligned_cols=247 Identities=24% Similarity=0.400 Sum_probs=186.9
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|.+.+.||+|+||.||++. ..+|+.||||++.+... +...+|+. ++..++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHH-HHHHcCCCcccceeeeeeeccccc
Confidence 456789999999999999999985 45789999999865321 23445654 78889999999999988643
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+..|++++++.++|.+++. ...+++..++.++.||+.
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~-----------------------------------------~~~l~~~~~~~i~~qi~~ 131 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVK-----------------------------------------CQKLTDDHVQFLIYQILR 131 (345)
T ss_pred ccccEEEEehhcccCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 3578999977665544431 223577888999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+||+++.++ .+||+|||+++.......
T Consensus 132 aL~~LH~~~ivH~dlkp~NIll~~~~--~~kl~dfg~~~~~~~~~~---------------------------------- 175 (345)
T cd07877 132 GLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMT---------------------------------- 175 (345)
T ss_pred HHHHHHHCCeeecCCChHHEEEcCCC--CEEEeccccccccccccc----------------------------------
Confidence 99999999999999999999997665 499999999875432110
Q ss_pred ceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhh-----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKD----------------- 757 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~----------------- 757 (934)
...||..|+|||.+.+ ..++.++|||||||++|+|++| .+||..... .. ..+...
T Consensus 176 ----~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T cd07877 176 ----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 250 (345)
T ss_pred ----ccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence 1357889999999876 4678999999999999999996 666643211 11 111000
Q ss_pred ------cccc-------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 758 ------RKDL-------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 758 ------~~~~-------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.... .....++++++||.+||+.||.+||++.+++.||||..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 0000 01124578999999999999999999999999999964
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=316.35 Aligned_cols=262 Identities=24% Similarity=0.338 Sum_probs=188.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQ 539 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~ 539 (934)
.+|.+.+.||+|+||.||++... ....||+|.+..... ....+|+. ++..+ +||||+++++++.+.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEME-LMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHH-HHHhccCCCCeeeEEEEEccC
Confidence 56788899999999999997432 245799999875432 23455665 55555 799999999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+..|++|||+ .+|+|.+++........ .............+++.+++.++.||+.||
T Consensus 91 ~~~~lv~e~~----------~~g~L~~~i~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL 147 (314)
T cd05099 91 GPLYVIVEYA----------AKGNLREFLRARRPPGP-------------DYTFDITKVPEEQLSFKDLVSCAYQVARGM 147 (314)
T ss_pred CceEEEEecC----------CCCcHHHHHHhcCCCcc-------------cccccccCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999955 44555555533211000 000000001124578889999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++ .+||+|||+++...........
T Consensus 148 ~~lH~~gi~H~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~-------------------------------- 193 (314)
T cd05099 148 EYLESRRCIHRDLAARNVLVTEDN--VMKIADFGLARGVHDIDYYKKT-------------------------------- 193 (314)
T ss_pred HHHHHCCeeeccccceeEEEcCCC--cEEEcccccccccccccccccc--------------------------------
Confidence 999999999999999999997665 4899999999876432211000
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-cccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK-DLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~-~~~~~~~~~e~~dLI~~~ 777 (934)
....++..|||||++.+..++.++|||||||++|+|++++.+||..... .....+.... ...+...+.++++||.+|
T Consensus 194 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 272 (314)
T cd05099 194 -SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMREC 272 (314)
T ss_pred -ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 0023556899999999888999999999999999999976788865432 2223222222 222344567899999999
Q ss_pred ccCCCCCCcCHHHHHc
Q 002343 778 LDPNPDLRPKAQNVLN 793 (934)
Q Consensus 778 L~~DP~~RPTa~evL~ 793 (934)
|+.||++|||+.++++
T Consensus 273 l~~~p~~Rps~~~ll~ 288 (314)
T cd05099 273 WHAVPTQRPTFKQLVE 288 (314)
T ss_pred cCCCcccCcCHHHHHH
Confidence 9999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=308.73 Aligned_cols=248 Identities=25% Similarity=0.360 Sum_probs=185.3
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-c---CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-E---GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~---g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
..|.+.+.||+|+||.||++... + +..||+|.+..... ....+|+. +++.++||||+++++++.+++..|+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEAS-IMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEecCCccEE
Confidence 45778899999999999998543 2 34799999865432 23445554 7788899999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||+ +|+|.+++... ...+++.++..++.|++.||+|||+
T Consensus 83 v~e~~~----------~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (267)
T cd05066 83 VTEYME----------NGSLDAFLRKH----------------------------DGQFTVIQLVGMLRGIASGMKYLSD 124 (267)
T ss_pred EEEcCC----------CCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999554 44454444321 1235677889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++|+||||||+|||++.++ .++|+|||+++.+.......... ....
T Consensus 125 ~~i~h~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~--------------------------------~~~~ 170 (267)
T cd05066 125 MGYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEAAYTT--------------------------------RGGK 170 (267)
T ss_pred CCEeehhhchhcEEECCCC--eEEeCCCCcccccccccceeeec--------------------------------CCCc
Confidence 9999999999999996654 59999999998765432211000 0123
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||++.+..++.++|||||||++||+++.+..||.... ......+... ........++++.+++.+||+.+|
T Consensus 171 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 250 (267)
T cd05066 171 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDR 250 (267)
T ss_pred cceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence 46789999999988999999999999999998874577775432 2222222222 112223456789999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
.+||++.++++
T Consensus 251 ~~Rp~~~~i~~ 261 (267)
T cd05066 251 NERPKFEQIVS 261 (267)
T ss_pred hhCCCHHHHHH
Confidence 99999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=316.04 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=182.7
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCc--EEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGR--SVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~--~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLV 545 (934)
.|.+.+.||+|+||+||++.. .++. .+|+|++..... ....+|+. ++..+ +||||+++++++.+++..|+|
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~-~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE-VLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHH-HHHHhcCCCCcceEEEEECCCCCceEE
Confidence 467788999999999999854 3454 468887754322 23445666 44555 899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.++++........ +. ..........+++.+++.++.||+.||+|||++
T Consensus 87 ~e~~~----------~~~L~~~l~~~~~~~~~---------~~----~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 143 (303)
T cd05088 87 IEYAP----------HGNLLDFLRKSRVLETD---------PA----FAIANSTASTLSSQQLLHFAADVARGMDYLSQK 143 (303)
T ss_pred EEeCC----------CCcHHHHHHhccccccc---------cc----ccccccccCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99654 44444444322110000 00 000000123578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++....... . ....+
T Consensus 144 gi~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~----~--------------------------------~~~~~ 185 (303)
T cd05088 144 QFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVK----K--------------------------------TMGRL 185 (303)
T ss_pred CccccccchheEEecCCC--cEEeCccccCcccchhhh----c--------------------------------ccCCC
Confidence 999999999999997655 489999999863211000 0 00234
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
+..|+|||++.+..++.++|||||||++|||+|++.+||.... ......+... ....+...++++.+||.+||+.+|+
T Consensus 186 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 186 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred cccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 6789999999888899999999999999999984567775432 2222222222 1112334568899999999999999
Q ss_pred CCcCHHHHHcC
Q 002343 784 LRPKAQNVLNH 794 (934)
Q Consensus 784 ~RPTa~evL~H 794 (934)
+||++++++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999876
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=333.67 Aligned_cols=244 Identities=28% Similarity=0.368 Sum_probs=191.2
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
....|.+...+|.|+|+.|-++ ...+++..|||++.+. .....+|+..++..-+||||+++++++.++.+.|+|||++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 4566777888999999999775 5567899999999766 2334556655677789999999999999999999999965
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.+ |-+.+.+. ..+....++..|+.+|+.|+.|||++||||
T Consensus 399 ~g----------~ell~ri~------------------------------~~~~~~~e~~~w~~~lv~Av~~LH~~gvvh 438 (612)
T KOG0603|consen 399 DG----------GELLRRIR------------------------------SKPEFCSEASQWAAELVSAVDYLHEQGVVH 438 (612)
T ss_pred cc----------cHHHHHHH------------------------------hcchhHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 54 32222211 112222566789999999999999999999
Q ss_pred cCCCCCeEEEe-cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 630 RDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 630 RDLKP~NILl~-~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|||||+|||+. .++ +++|+|||.++.+..+. .+ .+=|..
T Consensus 439 RDLkp~NIL~~~~~g--~lrltyFG~a~~~~~~~--~t------------------------------------p~~t~~ 478 (612)
T KOG0603|consen 439 RDLKPGNILLDGSAG--HLRLTYFGFWSELERSC--DT------------------------------------PALTLQ 478 (612)
T ss_pred cCCChhheeecCCCC--cEEEEEechhhhCchhh--cc------------------------------------cchhhc
Confidence 99999999994 554 48999999999876541 00 235788
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
|.|||++....||.+|||||||++||+||+| ..||...... ..+.. -....+....+.+++|||++||+.||.+||+
T Consensus 479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G-~tp~~~~P~~-~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~ 556 (612)
T KOG0603|consen 479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTG-RTLFAAHPAG-IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLG 556 (612)
T ss_pred ccChhhhccCCCCcchhhHHHHHHHHHHHhC-CCccccCCch-HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcC
Confidence 9999999999999999999999999999996 6676544333 22222 1223334667899999999999999999999
Q ss_pred HHHHHcCCCC
Q 002343 788 AQNVLNHPFF 797 (934)
Q Consensus 788 a~evL~HPff 797 (934)
+++++.||||
T Consensus 557 ~~~i~~h~w~ 566 (612)
T KOG0603|consen 557 ADEIGAHPWF 566 (612)
T ss_pred hhhhccCcch
Confidence 9999999999
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=311.94 Aligned_cols=266 Identities=28% Similarity=0.418 Sum_probs=194.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLV 545 (934)
.|.+.+.||+|+||.||++.. .+|+.||+|++.+.. .....+|.. ++..++ ||||+++++++.+++..|+|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~-~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKE-VLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHH-HHHhcccCCCchhHHHHhcCCceEEEE
Confidence 477888999999999999855 478999999986532 122344444 667777 99999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|. +++|.+++.. ...+++.+++.++.|++.||+|||++
T Consensus 81 ~e~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~i~~ql~~~l~~Lh~~ 121 (280)
T cd05581 81 LEYAP----------NGELLQYIRK-----------------------------YGSLDEKCTRFYAAEILLALEYLHSK 121 (280)
T ss_pred EcCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99663 3444443321 23567889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|++|+||||+||+++.++. ++|+|||++..+.............+.. ...............|
T Consensus 122 ~~~H~dl~~~ni~i~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 184 (280)
T cd05581 122 GIIHRDLKPENILLDKDMH--IKITDFGTAKVLDPNSSPESNKGDATNI---------------DSQIEKNRRRFASFVG 184 (280)
T ss_pred CeeecCCCHHHeEECCCCC--EEecCCccccccCCccccccCCCCCccc---------------cccccccccccccccC
Confidence 9999999999999976664 8999999998765433211100000000 0000000001112468
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+..|+|||++....++.++|||||||+++++++| ..||..... .............+...++.+.+||.+||+.||.+
T Consensus 185 ~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTG-KPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred CccccCHHHhCCCCCChhhhHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhh
Confidence 8999999999888899999999999999999995 777765432 22222222233344556789999999999999999
Q ss_pred CcCH----HHHHcCCCC
Q 002343 785 RPKA----QNVLNHPFF 797 (934)
Q Consensus 785 RPTa----~evL~HPff 797 (934)
||++ +++++||||
T Consensus 264 R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 264 RLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCcccCHHHHhcCCCC
Confidence 9999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=323.98 Aligned_cols=287 Identities=21% Similarity=0.293 Sum_probs=192.0
Q ss_pred ceEEEeeeecccCcEEEEEEE------EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~------~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~ 541 (934)
++|.+.+.||+|+||+||++. ..+++.||||++..... ....+|+..+.+..+|||||++++++.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 468889999999999999974 24578999999865332 3456777744444489999999998765 456
Q ss_pred EEEEEecccC-ChhhhHHhhcCC--------------------HHHHHhhhhccchhH----HHHH---Hhhcccccchh
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGS--------------------FEEQLNAKEQDSNLL----NEVR---IRLLPVMENTK 593 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~Gs--------------------L~~~L~~~~~~~~~~----~~~~---~~~~~~~~~~~ 593 (934)
+|++||||++ +|.+++....+. +.+.+.......... .... ...........
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 8999998874 666666443221 111111000000000 0000 00000000000
Q ss_pred hhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcc
Q 002343 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673 (934)
Q Consensus 594 ~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~ 673 (934)
.........+++.++..++.||+.||+|||+++|+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~------ 238 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYVRK------ 238 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCcchhhc------
Confidence 11112234578899999999999999999999999999999999997655 5999999999876432211100
Q ss_pred hhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HH
Q 002343 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RD 751 (934)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~ 751 (934)
....++..|+|||++.+..++.++|||||||++|+|++++..||..... ..
T Consensus 239 ---------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 291 (343)
T cd05103 239 ---------------------------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 291 (343)
T ss_pred ---------------------------CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH
Confidence 0123567899999999889999999999999999999866788754321 11
Q ss_pred HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 752 ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 752 ~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
...+... ....+...++++.+++.+||+.||++|||+.++++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 292 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2222221 122223346789999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=307.82 Aligned_cols=264 Identities=26% Similarity=0.407 Sum_probs=197.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeec-----CChhHHHHHHHHHHHhCCCCceeEEEEEEec--------
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESD-------- 538 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~-----~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-------- 538 (934)
..|.-..+||+|.||.|++|.. .+|+.||+|++.- .....+++|+. ++..+.|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreik-iL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHH-HHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3344456899999999999854 5688899987532 23357899997 8889999999999988764
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
...+|+||.+|+.+|.-++.- ....++..++.+++.+++.|
T Consensus 96 r~t~ylVf~~cehDLaGlLsn---------------------------------------~~vr~sls~Ikk~Mk~Lm~G 136 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSN---------------------------------------RKVRFSLSEIKKVMKGLMNG 136 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcC---------------------------------------ccccccHHHHHHHHHHHHHH
Confidence 335999999999877666511 02345678899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|.|+|...|+|||+||+|+||+.++. +||+|||+++.+.........
T Consensus 137 L~~iHr~kilHRDmKaaNvLIt~dgi--lklADFGlar~fs~~~n~~kp------------------------------- 183 (376)
T KOG0669|consen 137 LYYIHRNKILHRDMKAANVLITKDGI--LKLADFGLARAFSTSKNVVKP------------------------------- 183 (376)
T ss_pred HHHHHHhhHHhhcccHhhEEEcCCce--EEeeccccccceecccccCCC-------------------------------
Confidence 99999999999999999999977764 899999999877654322211
Q ss_pred eeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhc-------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR------------------- 758 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~------------------- 758 (934)
.+|..+-|..|.+||.+.+. .|+++.|||..||||.||.|+.....++........+...
T Consensus 184 rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~ 263 (376)
T KOG0669|consen 184 RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQ 263 (376)
T ss_pred CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHH
Confidence 13345679999999999875 5899999999999999999964333344333333222110
Q ss_pred ----cccc------------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhhhh
Q 002343 759 ----KDLF------------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRD 809 (934)
Q Consensus 759 ----~~~~------------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl~~ 809 (934)
+++. +--..+++.||+.+||..||.+|++++++|+|.|||......+-+++
T Consensus 264 sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqanl~~ 330 (376)
T KOG0669|consen 264 SIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQANLQD 330 (376)
T ss_pred hccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhhHHH
Confidence 0000 00112589999999999999999999999999999987665444443
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=311.42 Aligned_cols=248 Identities=25% Similarity=0.373 Sum_probs=181.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-----ecCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEec--CCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-----~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~ 542 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++...... ...+|++ +++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIE-ILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHH-HHHhCCCCCeeEEEEEEccCCCCce
Confidence 3577789999999999999743 35889999998654332 3455665 7788999999999998754 4578
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+||| |+++|+|.+++... ...+++..++.++.|++.||+||
T Consensus 83 ~lv~e----------~~~~~~L~~~l~~~----------------------------~~~l~~~~~~~~~~~l~~aL~~L 124 (284)
T cd05081 83 RLVME----------YLPYGSLRDYLQKH----------------------------RERLDHRKLLLYASQICKGMEYL 124 (284)
T ss_pred EEEEE----------ecCCCCHHHHHHhc----------------------------CcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 45555665554321 12357788899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.+........... .
T Consensus 125 H~~~i~H~dlkp~nili~~~~--~~~l~dfg~~~~~~~~~~~~~~~~--------------------------------~ 170 (284)
T cd05081 125 GSKRYVHRDLATRNILVESEN--RVKIGDFGLTKVLPQDKEYYKVRE--------------------------------P 170 (284)
T ss_pred HHCCceeccCCHhhEEECCCC--eEEECCCcccccccCCCcceeecC--------------------------------C
Confidence 999999999999999997665 489999999987654322111000 0
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh----------------HHHHHHhhccc-ccccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE----------------RDANIVKDRKD-LFLVE 765 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~----------------~~~~i~~~~~~-~~~~~ 765 (934)
..++..|+|||++.+..++.++|||||||++|||++|..++...... .....+..... .....
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (284)
T cd05081 171 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPG 250 (284)
T ss_pred CCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCC
Confidence 23455799999999889999999999999999999974432221110 00111111111 11234
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+.++.+||.+||..+|++|||+.++++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 251 CPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 4678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=310.18 Aligned_cols=246 Identities=29% Similarity=0.434 Sum_probs=186.1
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yLVm 546 (934)
|.+.+.||.|+||.||++... +|+.||+|++.... .....+|+. +++.++||||+++++++.+. +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIK-LLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHH-HHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 456788999999999998654 58999999997653 123455665 77888999999999999988 8999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||++++|.+++... ...+++.+++.++.||+.||+|||++|
T Consensus 80 e~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~i~~~i~~al~~LH~~~ 120 (287)
T cd07840 80 EYMDHDLTGLLDSP---------------------------------------EVKFTESQIKCYMKQLLEGLQYLHSNG 120 (287)
T ss_pred ccccccHHHHHhcc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 98776555444110 124677889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
++|+||||+|||++.++ .+||+|||++.......... .+...++
T Consensus 121 ~~h~dl~p~nil~~~~~--~~~l~d~g~~~~~~~~~~~~----------------------------------~~~~~~~ 164 (287)
T cd07840 121 ILHRDIKGSNILINNDG--VLKLADFGLARPYTKRNSAD----------------------------------YTNRVIT 164 (287)
T ss_pred ceeccCcHHHeEEcCCC--CEEEccccceeeccCCCccc----------------------------------ccccccc
Confidence 99999999999997665 49999999998765432100 0113468
Q ss_pred Cccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcc-----------c------------
Q 002343 707 SGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRK-----------D------------ 760 (934)
Q Consensus 707 ~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~-----------~------------ 760 (934)
..|+|||.+.+ ..++.++|||||||++|||++| .+||...... .. .+..... .
T Consensus 165 ~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T cd07840 165 LWYRPPELLLGATRYGPEVDMWSVGCILAELFLG-KPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKP 243 (287)
T ss_pred cccCCceeeEccccCChHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcccccc
Confidence 88999998765 4578999999999999999997 6676543221 11 1110000 0
Q ss_pred ------ccccC-CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ------LFLVE-HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ------~~~~~-~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
..... .++++.++|.+||+.||.+||++.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 244 YKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred chhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00011 26788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=308.72 Aligned_cols=244 Identities=24% Similarity=0.347 Sum_probs=175.2
Q ss_pred eeecccCcEEEEEEEEec---CcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGNYE---GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~---g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
++||+|+||+||++.... ...||+|.+...... ...+|+. +++.++||||+++++.+.+.+..|+|||||.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~-~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~- 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQ-PYRELNHPNVLQCLGQCIESIPYLLVLEFCP- 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHH-HHHhCCCCCcceEEEEECCCCceEEEEEeCC-
Confidence 369999999999985544 357899987644322 2345554 6778899999999999999999999999554
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++...... .....++..++.++.||+.||+|||+++|+|||
T Consensus 79 ---------~g~L~~~l~~~~~~------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d 125 (269)
T cd05042 79 ---------LGDLKNYLRSNRGM------------------------VAQMAQKDVLQRMACEVASGLLWLHQADFIHSD 125 (269)
T ss_pred ---------CCcHHHHHHhcccc------------------------ccccccHHHHHHHHHHHHHHHHHHHhcCEeccc
Confidence 44555554322110 011234667889999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++........... ....++..|+|
T Consensus 126 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~---------------------------------~~~~~~~~y~a 170 (269)
T cd05042 126 LALRNCQLTADL--SVKIGDYGLALEQYPEDYYITK---------------------------------DCHAVPLRWLA 170 (269)
T ss_pred ccHhheEecCCC--cEEEeccccccccccchheecc---------------------------------CCCCCcccccC
Confidence 999999997665 4899999998754332111100 01346778999
Q ss_pred chhccc-------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc-----cccccCCCHHHHHHHHHc
Q 002343 712 PEQLLQ-------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK-----DLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 712 PE~l~~-------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~-----~~~~~~~~~e~~dLI~~~ 777 (934)
||++.. ..++.++|||||||++|||++++.+||....... ........ +......++++.+++..|
T Consensus 171 PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (269)
T cd05042 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFC 250 (269)
T ss_pred HHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHH
Confidence 999753 3568899999999999999997788887653322 12222111 111223457788999999
Q ss_pred ccCCCCCCcCHHHHHc
Q 002343 778 LDPNPDLRPKAQNVLN 793 (934)
Q Consensus 778 L~~DP~~RPTa~evL~ 793 (934)
+ .||++|||+++|++
T Consensus 251 ~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 251 W-LDPETRPTAEEVHE 265 (269)
T ss_pred h-cCcccccCHHHHHH
Confidence 8 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=309.73 Aligned_cols=255 Identities=21% Similarity=0.253 Sum_probs=189.0
Q ss_pred cceEEEeeeecccCcEEEEEEEEec-----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~-----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~ 541 (934)
+++|.+.+.||+|+||+||++.... +..||+|++..... ....+|+. +++.++||||+++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC-LLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEecCCCC
Confidence 4568889999999999999986655 68899999864432 23445554 7788899999999998766 578
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.++++|++. +|+|.+++....... ......+++.+++.++.||+.||+|
T Consensus 84 ~~~~~~~~~----------~~~L~~~l~~~~~~~---------------------~~~~~~l~~~~~~~i~~~i~~~l~~ 132 (280)
T cd05043 84 PFVLYPYMN----------WGNLKLFLQQCRLGE---------------------ANNPQALSTQQLVHMAIQIACGMSY 132 (280)
T ss_pred CEEEEEcCC----------CCcHHHHHHhccccc---------------------cccccCCCHHHHHHHHHHHHHHHHH
Confidence 999999554 444444443211000 0012457888999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|+||||||+|||++.++ .+||+|||+++.+......... .
T Consensus 133 LH~~~i~H~di~p~nil~~~~~--~~kl~d~g~~~~~~~~~~~~~~---------------------------------~ 177 (280)
T cd05043 133 LHKRGVIHKDIAARNCVIDEEL--QVKITDNALSRDLFPMDYHCLG---------------------------------D 177 (280)
T ss_pred HHHCCEeecccCHhhEEEcCCC--cEEECCCCCcccccCCceEEeC---------------------------------C
Confidence 9999999999999999997654 5999999999876543221110 0
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhccc-ccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKD-LFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~-~~~~~~~~e~~dLI~~~L~ 779 (934)
...++..|+|||++.+..++.++|||||||++||+++.+.+||...... ....+..... ......++++.+++.+||+
T Consensus 178 ~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 257 (280)
T cd05043 178 NENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWA 257 (280)
T ss_pred CCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence 1236778999999998889999999999999999999557888654322 2222222211 1223346789999999999
Q ss_pred CCCCCCcCHHHHHc
Q 002343 780 PNPDLRPKAQNVLN 793 (934)
Q Consensus 780 ~DP~~RPTa~evL~ 793 (934)
.||++|||+.++++
T Consensus 258 ~~p~~Rps~~~~~~ 271 (280)
T cd05043 258 LDPEERPSFSQLVQ 271 (280)
T ss_pred CChhhCCCHHHHHH
Confidence 99999999999984
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=313.70 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=183.0
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cC--cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EG--RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g--~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||.||++... ++ ..+|+|.+..... +...+|+..+.+..+||||+++++++.+.+..|++|
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 4777889999999999998543 33 3579998864222 234556664434448999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||++ +|+|.+++......... .. ..........+++.+++.++.||+.||+|||++|
T Consensus 83 e~~~----------~~~L~~~l~~~~~~~~~------------~~-~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 83 EYAP----------YGNLLDFLRKSRVLETD------------PA-FAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred EecC----------CCcHHHHHHhccccccc------------cc-cccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9554 45555554321110000 00 0000001235788999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||++........ .. ....+
T Consensus 140 ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~----~~--------------------------------~~~~~ 181 (297)
T cd05089 140 FIHRDLAARNVLVGENL--ASKIADFGLSRGEEVYVK----KT--------------------------------MGRLP 181 (297)
T ss_pred cccCcCCcceEEECCCC--eEEECCcCCCccccceec----cC--------------------------------CCCcC
Confidence 99999999999997654 589999999864321100 00 02235
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
..|+|||++.+..++.++|||||||++|||++.+.+||..... ......... ....+...++++.+||.+||+.||.+
T Consensus 182 ~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred ccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 5799999999889999999999999999999845677755432 222222222 12223345689999999999999999
Q ss_pred CcCHHHHHcC
Q 002343 785 RPKAQNVLNH 794 (934)
Q Consensus 785 RPTa~evL~H 794 (934)
||+++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999754
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=316.92 Aligned_cols=245 Identities=26% Similarity=0.383 Sum_probs=188.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|...+.||+|+||+||++.. .+++.||+|.+..... ....+|+. +++.++|||++++++++.+.+..|+|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHH-HHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 4466678899999999999854 4688999999864211 23345655 77888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+++.+++... ...+++.++..++.|++.||.|||++
T Consensus 94 ~e~~~~~l~~~~~~~---------------------------------------~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 94 MEYCLGSASDLLEVH---------------------------------------KKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred EEccCCCHHHHHHHc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998887766654321 12356778899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+|+||||||+|||++.++ .+||+|||++....... ...|
T Consensus 135 ~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~~~~~---------------------------------------~~~~ 173 (308)
T cd06634 135 NMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPAN---------------------------------------XFVG 173 (308)
T ss_pred CcccCCCCHHhEEECCCC--cEEECCcccceeecCcc---------------------------------------cccC
Confidence 999999999999997655 49999999987653211 1347
Q ss_pred CCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHH-HHHHhhccc-ccccCCCHHHHHHHHHccc
Q 002343 706 SSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERD-ANIVKDRKD-LFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 706 T~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~-~~i~~~~~~-~~~~~~~~e~~dLI~~~L~ 779 (934)
++.|+|||++. ...++.++|||||||++|+|++| ..||... .... ..+...... ......+.++.+||.+||+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 252 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 252 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcC-CCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhh
Confidence 88999999985 34678899999999999999997 5555432 2221 222222211 1223456789999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~ 799 (934)
.+|++||+++++++|||+..
T Consensus 253 ~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 253 KIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred CCcccCCCHHHHhhCccccc
Confidence 99999999999999999965
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=303.24 Aligned_cols=241 Identities=27% Similarity=0.374 Sum_probs=184.0
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChh
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
+.||+|+||.||++....++.||+|.+...... ...+|+. +++.++||||+++++++.+.+..|+|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~----- 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAE-ILKQYDHPNIVKLIGVCVQKQPIYIVMELV----- 74 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCeEEEEEEEecCCCeEEEEEcC-----
Confidence 369999999999987666999999988654332 3345554 788899999999999999999999999955
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKP 634 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP 634 (934)
.+++|.+++... ...++...++.++.|++.||+|||+++|+||||||
T Consensus 75 -----~~~~l~~~l~~~----------------------------~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p 121 (251)
T cd05041 75 -----PGGSLLTFLRKK----------------------------KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAA 121 (251)
T ss_pred -----CCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCc
Confidence 444555444321 12356778889999999999999999999999999
Q ss_pred CeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchh
Q 002343 635 QNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714 (934)
Q Consensus 635 ~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~ 714 (934)
+|||++.++ .+||+|||+++........... ....++..|+|||.
T Consensus 122 ~nili~~~~--~~~l~d~g~~~~~~~~~~~~~~---------------------------------~~~~~~~~y~~PE~ 166 (251)
T cd05041 122 RNCLVGENN--VLKISDFGMSREEEGGIYTVSD---------------------------------GLKQIPIKWTAPEA 166 (251)
T ss_pred ceEEEcCCC--cEEEeeccccccccCCcceecc---------------------------------ccCcceeccCChHh
Confidence 999997665 4999999999865432111000 00224567999999
Q ss_pred cccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc-cccccCCCHHHHHHHHHcccCCCCCCcCHHHHH
Q 002343 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 715 l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL 792 (934)
+.++.++.++|||||||++|+|++++..||....... ...+.... ...+...+.++.+++.+||+.+|.+|||+.|++
T Consensus 167 ~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell 246 (251)
T cd05041 167 LNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIY 246 (251)
T ss_pred hccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 9988999999999999999999997788886543322 22222221 122334567999999999999999999999998
Q ss_pred c
Q 002343 793 N 793 (934)
Q Consensus 793 ~ 793 (934)
+
T Consensus 247 ~ 247 (251)
T cd05041 247 N 247 (251)
T ss_pred H
Confidence 6
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=314.19 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=188.7
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC------
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ------ 539 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~------ 539 (934)
-+.|.+.+.||+|+||.||++.. .+++.||||++..... ....+|++ +++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIK-ILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHH-HHHhcCCCCccchhhheecccccccc
Confidence 46788999999999999999854 4689999999854321 23456766 77888999999999987543
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..+|+||||+..+|.+.+.. ....+++.+++.++.||++
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~---------------------------------------~~~~~~~~~~~~i~~~l~~ 126 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLEN---------------------------------------PSVKLTESQIKCYMLQLLE 126 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhc---------------------------------------cccCCCHHHHHHHHHHHHH
Confidence 35799999877655444311 0124678889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++.............. ...
T Consensus 127 al~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~------------------------~~~ 180 (311)
T cd07866 127 GINYLHENHILHRDIKAANILIDNQG--ILKIADFGLARPYDGPPPNPKGGGG------------------------GGT 180 (311)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCCC--CEEECcCccchhccCCCcccccCCc------------------------ccc
Confidence 99999999999999999999997665 4899999999876543321111000 000
Q ss_pred ceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcc--------------c
Q 002343 698 LFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRK--------------D 760 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~--------------~ 760 (934)
...+...|++.|+|||++.+. .++.++|||||||++|||++| .+||....... . .+..... .
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T cd07866 181 RKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR-RPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPG 259 (311)
T ss_pred cccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccc
Confidence 011234688999999998764 478999999999999999996 67775432211 1 1110000 0
Q ss_pred ---------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ---------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ---------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.......+++.+||.+||+.||.+|||+.+++.||||
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 260 CEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 0001233678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=309.71 Aligned_cols=257 Identities=28% Similarity=0.429 Sum_probs=197.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC--hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
...+.|...+.||+|++|.||++... +++.||+|++.... .+...+|+. +++.++|+||+++++++...+..|+++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEIL-IMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHH-HHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 34566888889999999999998554 68899999997654 334556665 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|+ +++|.+++... ...+++.++..++.|++.||+|||+.|
T Consensus 95 e~~~----------~~~L~~~l~~~----------------------------~~~l~~~~~~~i~~~i~~~L~~lH~~g 136 (286)
T cd06614 95 EYMD----------GGSLTDIITQN----------------------------FVRMNEPQIAYVCREVLQGLEYLHSQN 136 (286)
T ss_pred eccC----------CCcHHHHHHHh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9666 33444443321 124677888999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+|+||||+||+++.++. ++|+|||++.......... ....|+
T Consensus 137 i~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~ 179 (286)
T cd06614 137 VIHRDIKSDNILLSKDGS--VKLADFGFAAQLTKEKSKR-----------------------------------NSVVGT 179 (286)
T ss_pred eeeCCCChhhEEEcCCCC--EEECccchhhhhccchhhh-----------------------------------ccccCC
Confidence 999999999999976654 8999999987654321100 013478
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcccc-c-ccCCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKDL-F-LVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~~-~-~~~~~~e~~dLI~~~L~~DP 782 (934)
..|+|||++.+..++.++|||||||++|+|++| ..||...... . ..+....... . ....+.++.+||.+||+.+|
T Consensus 180 ~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 258 (286)
T cd06614 180 PYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG-EPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDP 258 (286)
T ss_pred cccCCHhHhcCCCCCCccccHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccCh
Confidence 899999999988899999999999999999996 6777654322 1 1222211111 1 11246789999999999999
Q ss_pred CCCcCHHHHHcCCCCCCccch
Q 002343 783 DLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~~~ 803 (934)
.+||++.+++.||||....++
T Consensus 259 ~~Rpt~~~il~~~~~~~~~~~ 279 (286)
T cd06614 259 EKRPSAEELLQHPFLKKACPK 279 (286)
T ss_pred hhCcCHHHHhhChHhhccCch
Confidence 999999999999999764443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=316.77 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=184.7
Q ss_pred EEEeeeecccCcEEEEEEEEe-c--CcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-E--GRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD----QDFV 542 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~--g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~ 542 (934)
|.+.+.||+|+||.||++... . +..||||++.... .....+|+..+....+||||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 677889999999999998543 4 7799999986432 23456677644344479999999987543 2468
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+++|+++++|.+.+.. ..++++..++.++.||+.||+||
T Consensus 82 ~~~~e~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~~~~qi~~aL~~L 121 (332)
T cd07857 82 YLYEELMEADLHQIIRS----------------------------------------GQPLTDAHFQSFIYQILCGLKYI 121 (332)
T ss_pred EEEEecccCCHHHHHhc----------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999877666554421 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+|+.+.......... ...
T Consensus 122 H~~givH~dlkp~Nili~~~~--~~kl~Dfg~a~~~~~~~~~~~~~-------------------------------~~~ 168 (332)
T cd07857 122 HSANVLHRDLKPGNLLVNADC--ELKICDFGLARGFSENPGENAGF-------------------------------MTE 168 (332)
T ss_pred HhCCcccCCCCHHHeEEcCCC--CEEeCcCCCceeccccccccccc-------------------------------ccC
Confidence 999999999999999997665 49999999998765432211000 011
Q ss_pred CCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HH-----------------------h
Q 002343 703 GYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IV-----------------------K 756 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~-----------------------~ 756 (934)
..||..|+|||++.+ ..++.++|||||||++|+|++| .+||...... ... ++ .
T Consensus 169 ~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
T cd07857 169 YVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR-KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR 247 (332)
T ss_pred cccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH
Confidence 468999999998866 4689999999999999999985 6777543211 000 00 0
Q ss_pred h---cc-c---ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 757 D---RK-D---LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 757 ~---~~-~---~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
. .. . ......+.++.+|+.+||+.||++|||+.+++.||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 248 SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 0 00 0 0112235789999999999999999999999999999543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=326.74 Aligned_cols=289 Identities=22% Similarity=0.332 Sum_probs=193.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCC-CCceeEEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQ-HPNIVRWYGVESD 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~ 538 (934)
.-.+.|.+.+.||+|+||.||++... .++.||||++..... +...+|+. ++..+. |||||++++++..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~-~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELK-IMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHH-HHHhcCCCCCeEEEEEEEcc
Confidence 34456778899999999999997532 346899999975432 23455665 566665 9999999999999
Q ss_pred CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccc-hhHHHH-----------------------------------
Q 002343 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDS-NLLNEV----------------------------------- 581 (934)
Q Consensus 539 ~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~-~~~~~~----------------------------------- 581 (934)
.+..|+|||||.+ +|.+++.........+........ ......
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 9999999997763 566655433221111110000000 000000
Q ss_pred -------HH--------------hhcccccc-hhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEE
Q 002343 582 -------RI--------------RLLPVMEN-TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639 (934)
Q Consensus 582 -------~~--------------~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl 639 (934)
+. ........ ......-....+++..++.++.||+.||+|||+.+|+||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 00 00000000 000000112356788899999999999999999999999999999999
Q ss_pred ecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCC
Q 002343 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR 719 (934)
Q Consensus 640 ~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~ 719 (934)
+.++ .+||+|||+++.+......... ....|+..|+|||++.+..
T Consensus 273 ~~~~--~~kL~DfGla~~~~~~~~~~~~---------------------------------~~~~~~~~y~aPE~~~~~~ 317 (401)
T cd05107 273 CEGK--LVKICDFGLARDIMRDSNYISK---------------------------------GSTFLPLKWMAPESIFNNL 317 (401)
T ss_pred eCCC--EEEEEecCcceecccccccccC---------------------------------CCcCCCCceeChHHhcCCC
Confidence 7654 5999999999865432211100 0134788999999999888
Q ss_pred CcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc-cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 720 QTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 720 ~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
++.++|||||||++|||++++.+||....... ...+.... ...+...+.++.+|+.+||+.+|.+||++.+|++.
T Consensus 318 ~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 318 YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999996677876532222 22222221 22233456899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=316.77 Aligned_cols=248 Identities=24% Similarity=0.384 Sum_probs=188.3
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEec-CCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD-QDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~ 542 (934)
.++++|.+.+.||+|+||.||++. ..+++.||||++.+.. .....+|+. ++..++||||+++++++.. .+..
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELK-LLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHH-HHHhcCCCCeeeEeeeEecCCCcE
Confidence 467789999999999999999984 4579999999885422 133455665 7788899999999999865 5689
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|++||+|+++|.+++. ...+++..+..++.||+.||+||
T Consensus 86 ~lv~e~~~~~L~~~~~-----------------------------------------~~~~~~~~~~~~~~ql~~aL~~L 124 (328)
T cd07856 86 YFVTELLGTDLHRLLT-----------------------------------------SRPLEKQFIQYFLYQILRGLKYV 124 (328)
T ss_pred EEEeehhccCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999987665544331 23356677888999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++ .+||+|||+++....... .
T Consensus 125 H~~~iiH~dl~p~Nili~~~~--~~~l~dfg~~~~~~~~~~--------------------------------------~ 164 (328)
T cd07856 125 HSAGVVHRDLKPSNILINENC--DLKICDFGLARIQDPQMT--------------------------------------G 164 (328)
T ss_pred HhCCcccCCCCHHHEeECCCC--CEEeCccccccccCCCcC--------------------------------------C
Confidence 999999999999999996654 499999999875432110 1
Q ss_pred CCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH------------------------HHh
Q 002343 703 GYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN------------------------IVK 756 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~------------------------i~~ 756 (934)
..|+..|+|||.+.+ ..++.++|||||||++|+|++| .+||...... ... ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd07856 165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ 243 (328)
T ss_pred CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence 347889999999866 5689999999999999999996 6677432211 000 000
Q ss_pred hc---ccc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 757 DR---KDL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 757 ~~---~~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. ... .....++++.++|.+||+.+|++|||+++++.||||...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence 00 000 012345789999999999999999999999999999543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=306.11 Aligned_cols=248 Identities=24% Similarity=0.343 Sum_probs=184.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cC---cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EG---RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g---~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
..|...+.||+|+||.||++... ++ ..||||.+..... +....|+. +++.++||||+++++++.+.+..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEAS-IMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHH-HHhcCCCCCeeEEEEEEccCCCcEE
Confidence 35667889999999999998654 33 3799999865432 23345554 7788999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||++. +|+|.+++... ...+++.++..++.|++.||+|||+
T Consensus 84 v~e~~~----------~~~L~~~~~~~----------------------------~~~~~~~~~~~~~~~l~~al~~lH~ 125 (268)
T cd05063 84 ITEYME----------NGALDKYLRDH----------------------------DGEFSSYQLVGMLRGIAAGMKYLSD 125 (268)
T ss_pred EEEcCC----------CCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999554 44555444321 2335777889999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.||+||||||+|||++.++ .+||+|||++............. ....
T Consensus 126 ~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~--------------------------------~~~~ 171 (268)
T cd05063 126 MNYVHRDLAARNILVNSNL--ECKVSDFGLSRVLEDDPEGTYTT--------------------------------SGGK 171 (268)
T ss_pred CCeeccccchhhEEEcCCC--cEEECCCccceecccccccceec--------------------------------cCCC
Confidence 9999999999999997654 59999999998765322111000 0022
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||++.+..++.++|||||||++||+++.+.+||.... ......+... ........+.++.+++.+||+.||
T Consensus 172 ~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p 251 (268)
T cd05063 172 IPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDR 251 (268)
T ss_pred cCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 45679999999988899999999999999999984566775432 2222222222 222233456789999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
++||++.++++
T Consensus 252 ~~Rp~~~~i~~ 262 (268)
T cd05063 252 ARRPRFVDIVN 262 (268)
T ss_pred ccCcCHHHHHH
Confidence 99999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=315.18 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=188.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHH-HhCCCCceeEEEEEEecCC----eEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLI-ASDQHPNIVRWYGVESDQD----FVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll-~~l~HpNIV~l~g~~~~~~----~~y 543 (934)
+.|++...+.+.||+|.||.||+ +.+.|+.||||++.......+++|-+... -.++|+||+.+++.-..++ .+|
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwr-G~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWR-GRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred HhhhheeEEEEEecCccccceee-ccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 78899999999999999999998 78999999999998887777888765332 2569999999999865543 699
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||.+ |.++|+|.+||.. ..++.+..++++..+|+||+|||
T Consensus 286 LvTd----------YHe~GSL~DyL~r------------------------------~tv~~~~ml~LalS~AsGLaHLH 325 (513)
T KOG2052|consen 286 LVTD----------YHEHGSLYDYLNR------------------------------NTVTTEGMLKLALSIASGLAHLH 325 (513)
T ss_pred Eeee----------cccCCcHHHHHhh------------------------------ccCCHHHHHHHHHHHhhhHHHHH
Confidence 9999 8899999999864 34566778999999999999999
Q ss_pred HC--------CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 624 EI--------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 624 s~--------gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
.. .|.|||||..|||+.+++. +.|+|+|||.....+........
T Consensus 326 ~eI~GTqgKPaIAHRDlKSKNILVKkn~~--C~IADLGLAv~h~~~t~~idi~~-------------------------- 377 (513)
T KOG2052|consen 326 MEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSDTDTIDIPP-------------------------- 377 (513)
T ss_pred HHHhcCCCCchhhccccccccEEEccCCc--EEEeeceeeEEecccCCcccCCC--------------------------
Confidence 53 4999999999999977765 78999999988766543221111
Q ss_pred ccceeecCCCCCccccchhcccCC------CcccccccchhhhhHHhhcC---------CCCCCCCch------hHHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGR------QTRAIDLFSLGCILFFCITG---------GKHPYGESF------ERDANI 754 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~------~t~ksDIWSLGvILyeLltG---------g~~Pf~~~~------~~~~~i 754 (934)
...+||-.|||||++...- .-..+||||||.|+||++.. .++||.+.. +....+
T Consensus 378 -----N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkV 452 (513)
T KOG2052|consen 378 -----NPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKV 452 (513)
T ss_pred -----CCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcc
Confidence 1268999999999996532 13479999999999998753 246775432 222211
Q ss_pred Hh--hcccccccC-C-C---HHHHHHHHHcccCCCCCCcCHHHHH
Q 002343 755 VK--DRKDLFLVE-H-I---PEAVDLFTRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 755 ~~--~~~~~~~~~-~-~---~e~~dLI~~~L~~DP~~RPTa~evL 792 (934)
+- ...+..+.. . . ..+..|++.||..+|..|.||-.+.
T Consensus 453 VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 453 VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 11 111111111 1 1 2456789999999999999987664
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=320.71 Aligned_cols=250 Identities=28% Similarity=0.415 Sum_probs=189.8
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD-----FV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-----~~ 542 (934)
+|.+.+.||.|+||+||++... +++.||||++..... ....+|+. .++.++||||+++++++.+.+ .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIK-LLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHH-HHHhcCCcchhhhhhhhcccCcccccce
Confidence 3677899999999999998654 589999999875431 23455655 778889999999999988875 79
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|++||++.++|.+++. . ...+++..++.++.||+.||+||
T Consensus 80 ~lv~e~~~~~l~~~l~-----------~-----------------------------~~~l~~~~~~~i~~~l~~~l~~L 119 (330)
T cd07834 80 YIVTELMETDLHKVIK-----------S-----------------------------PQPLTDDHIQYFLYQILRGLKYL 119 (330)
T ss_pred EEEecchhhhHHHHHh-----------C-----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999977665544431 1 22467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .++|+|||++............ .+.
T Consensus 120 H~~gi~H~dlkp~nili~~~~--~~~L~dfg~~~~~~~~~~~~~~--------------------------------~~~ 165 (330)
T cd07834 120 HSANVIHRDLKPSNILVNSNC--DLKICDFGLARGVDPDEDEKGF--------------------------------LTE 165 (330)
T ss_pred HhCCeecCCCCHHHEEEcCCC--CEEEcccCceEeeccccccccc--------------------------------ccc
Confidence 999999999999999997665 5999999999876553211000 011
Q ss_pred CCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-----------------------
Q 002343 703 GYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD----------------------- 757 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~----------------------- 757 (934)
..||..|+|||++.+. .++.++|||||||++|+|++| .+||..... .....+..
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T cd07834 166 YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR-KPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLK 244 (330)
T ss_pred cccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcC-CCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHh
Confidence 3578899999999887 789999999999999999996 667654321 11110000
Q ss_pred -ccc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 758 -RKD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 758 -~~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
... ......++++.+||.+||+.||.+||+++++++||||..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 245 SLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred hcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 000 001224578899999999999999999999999999954
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=308.51 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=184.6
Q ss_pred eEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||.||++. ..+++.||||.+..... ....+|+. +++.++||||+++++++.+++..|++|
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEID-LLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHH-HHHHccCCchhhhhheeEeCCeEEEEE
Confidence 35667899999999999985 46799999998764321 23345555 778889999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|++. +++|.+++..... ....+++.+++.++.||+.||+|||++|
T Consensus 82 e~~~----------~~~L~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 82 ELAD----------AGDLSRMIKHFKK-------------------------QKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred EecC----------CCCHHHHHHHhhc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9655 3444444321100 1234688899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+|+||||+||+++.++ .++|+|||++..+....... ....|+
T Consensus 127 i~H~dl~p~nili~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~ 169 (267)
T cd08229 127 VMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAA-----------------------------------HSLVGT 169 (267)
T ss_pred eecCCCCHHHEEEcCCC--CEEECcchhhhccccCCccc-----------------------------------ccccCC
Confidence 99999999999997665 49999999987654322110 013588
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH---H-HHhhcc-cccccCCCHHHHHHHHHcccCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---N-IVKDRK-DLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~---~-i~~~~~-~~~~~~~~~e~~dLI~~~L~~D 781 (934)
..|+|||++.+..++.++|||||||++|+|++| ..||........ . +..... .......++++.+||.+||+.|
T Consensus 170 ~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 248 (267)
T cd08229 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL-QSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD 248 (267)
T ss_pred cCccCHHHhcCCCccchhhHHHHHHHHHHHHhC-CCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCC
Confidence 999999999988899999999999999999997 455543221111 1 111111 1122335678999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++|||+.+|++
T Consensus 249 p~~Rpt~~~i~~ 260 (267)
T cd08229 249 PEKRPDITYVYD 260 (267)
T ss_pred cccCCCHHHHHH
Confidence 999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=298.88 Aligned_cols=261 Identities=25% Similarity=0.339 Sum_probs=193.0
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~----- 539 (934)
..-+++|.+.+.||+|+|+-||++ +..+++.+|+|++.-.. .+.+++|+. ..+..+||||++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid-~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREID-NHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHH-HHHhhCCcchHHHHHHHHHhhccCc
Confidence 345688999999999999999997 67789999999986543 356778886 77889999999999876443
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
.+.||+++ |...|+|.+.+..... +..-+++.+++.|+.+|++||
T Consensus 96 ~~~yll~P----------yy~~Gsl~d~i~~~k~-------------------------kg~~~sE~~iL~if~gic~gL 140 (302)
T KOG2345|consen 96 HEAYLLLP----------YYKRGSLLDEIERLKI-------------------------KGNFVSEAQILWIFLGICRGL 140 (302)
T ss_pred eeEEEEee----------hhccccHHHHHHHHhh-------------------------cCCccCHHHHHHHHHHHHHHH
Confidence 35999999 6667777766643221 133578999999999999999
Q ss_pred HHHHHCC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 620 SHLHEIG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 620 ~yLHs~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
++||+.. .+||||||.|||++.++ .++|.|||.+....-.......... ...+..
T Consensus 141 ~~lH~~~~~yAH~DiKP~NILls~~~--~~vl~D~GS~~~a~i~i~~~~~a~~------------lQe~a~--------- 197 (302)
T KOG2345|consen 141 EALHEKEPPYAHRDIKPANILLSDSG--LPVLMDLGSATQAPIQIEGSRQALR------------LQEWAE--------- 197 (302)
T ss_pred HHHhccCCcccccCCCcceeEecCCC--ceEEEeccCccccceEeechHHHHH------------HHHHHH---------
Confidence 9999998 99999999999997654 4899999998765432211111000 000111
Q ss_pred ceeecCCCCCccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHH---HHhhccccc--ccCCCHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN---IVKDRKDLF--LVEHIPE 769 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~---i~~~~~~~~--~~~~~~e 769 (934)
...|..|+|||.+.- ...+.++|||||||+||.|+.| ..||....++... .+......+ ....+..
T Consensus 198 -----e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~-~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~ 271 (302)
T KOG2345|consen 198 -----ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFG-ESPFERIYQQGGSLALAVQNAQISIPNSSRYSEA 271 (302)
T ss_pred -----HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHc-CCcchHHhhcCCeEEEeeeccccccCCCCCccHH
Confidence 235889999999864 3458999999999999999996 7788654442111 011111111 1125678
Q ss_pred HHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 770 AVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+.+||+.||+.||.+||++.+++.+
T Consensus 272 l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 272 LHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHHHhcCCcccCCCHHHHHHH
Confidence 9999999999999999999999865
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=299.19 Aligned_cols=247 Identities=33% Similarity=0.490 Sum_probs=191.3
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yLVm 546 (934)
|...+.||+|++|.||++... +++.||+|++.... .+...+|+. +++.++||||+++++.+.+. +..++++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIR-ILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHH-HHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 566789999999999998554 68999999987654 233445554 78889999999999999988 8999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|++. +++|.+++.. ...+++.++..++.|++.||+|||+.+
T Consensus 81 e~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (260)
T cd06606 81 EYVS----------GGSLSSLLKK-----------------------------FGKLPEPVIRKYTRQILEGLAYLHSNG 121 (260)
T ss_pred EecC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9663 3344443321 124677889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
++|+||+|+||+++.++ .++|+|||.+........... .....++
T Consensus 122 ~~h~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~~---------------------------------~~~~~~~ 166 (260)
T cd06606 122 IVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIETGEG---------------------------------TGSVRGT 166 (260)
T ss_pred ccccCCCHHHEEEcCCC--CEEEcccccEEeccccccccc---------------------------------ccCCCCC
Confidence 99999999999997755 489999999987665432100 0114588
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHh--hcccccccCCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVK--DRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~--~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
..|+|||.+.+...+.++|||||||++|+|++| ..||...... ...... ......+...+.++.++|.+||+.||
T Consensus 167 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p 245 (260)
T cd06606 167 PYWMAPEVIRGEEYGRAADIWSLGCTVIEMATG-KPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDP 245 (260)
T ss_pred ccccCHhhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCCh
Confidence 899999999888899999999999999999996 6777654311 111111 11122233446799999999999999
Q ss_pred CCCcCHHHHHcCCCC
Q 002343 783 DLRPKAQNVLNHPFF 797 (934)
Q Consensus 783 ~~RPTa~evL~HPff 797 (934)
++||++.++++||||
T Consensus 246 ~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 246 KKRPTADELLQHPFL 260 (260)
T ss_pred hhCCCHHHHhhCCCC
Confidence 999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=300.14 Aligned_cols=245 Identities=30% Similarity=0.494 Sum_probs=191.7
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|++|.||++.. .+++.||+|.+..... +...+|++ ++..++||||+++++++.+.+..|++||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEID-LLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHH-HHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 66788999999999999854 4688999999875542 23345554 77888999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+. +++|.+++.. ...+++..+..++.|++.||.|||++||+
T Consensus 81 ~~----------~~~L~~~~~~-----------------------------~~~l~~~~~~~~~~~i~~~l~~lH~~~i~ 121 (254)
T cd06627 81 AE----------NGSLRQIIKK-----------------------------FGPFPESLVAVYVYQVLQGLAYLHEQGVI 121 (254)
T ss_pred CC----------CCcHHHHHHh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 55 3444443321 23467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .++|+|||++.......... ....|+..
T Consensus 122 H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 164 (254)
T cd06627 122 HRDIKAANILTTKDG--VVKLADFGVATKLNDVSKDD-----------------------------------ASVVGTPY 164 (254)
T ss_pred cCCCCHHHEEECCCC--CEEEeccccceecCCCcccc-----------------------------------cccccchh
Confidence 999999999997654 48999999998765432210 01357889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||.+.+..++.++||||||+++|+|++| .+||...... ............+...++++.++|.+||..+|++||
T Consensus 165 y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 243 (254)
T cd06627 165 WMAPEVIEMSGASTASDIWSLGCTVIELLTG-NPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRP 243 (254)
T ss_pred hcCHhhhcCCCCCcchhHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCc
Confidence 9999999888889999999999999999996 5676543222 122222333333445568999999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
|+.+++.||||
T Consensus 244 ~~~~~l~~~~~ 254 (254)
T cd06627 244 TAKQLLKHPWI 254 (254)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=310.80 Aligned_cols=266 Identities=25% Similarity=0.361 Sum_probs=188.1
Q ss_pred EEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
|.+.+.||+|+||+||++... ....||+|.+..... ....+|+. +++.++||||+++++.+..++..|+
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFN-LLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHH-HHhhCCCCCEeeEEEEEecCCCcEE
Confidence 556789999999999997542 235799998865432 23456665 7788999999999999999999999
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhh-hHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD-IELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+||||. ++|.+++ .......... . ..-...... ...-....+++..++.++.|++.||+||
T Consensus 81 v~e~~~~~~L~~~l-----------~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L 143 (290)
T cd05045 81 IVEYAKYGSLRSFL-----------RESRKVGPSY----L--GSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL 143 (290)
T ss_pred EEEecCCCCHHHHH-----------HhcCCccccc----c--ccccccccccccCccccccCHHHHHHHHHHHHHHHHHH
Confidence 999766 3454444 2211000000 0 000000000 0000124578899999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++ .+||+|||+++.+......... ..
T Consensus 144 H~~~ivH~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~---------------------------------~~ 188 (290)
T cd05045 144 AEMKLVHRDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVKR---------------------------------SK 188 (290)
T ss_pred HHCCeehhhhhhheEEEcCCC--cEEeccccccccccCccchhcc---------------------------------cC
Confidence 999999999999999997655 5999999999866433221110 01
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..++..|+|||++.+..++.++|||||||++|||++++..||.... ....+..... ....+...+.++.+++.+||+.
T Consensus 189 ~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 268 (290)
T cd05045 189 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQ 268 (290)
T ss_pred CCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccC
Confidence 2456789999999888899999999999999999995678886543 3333333322 1222344568999999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
||++||++.++++
T Consensus 269 ~P~~Rp~~~~i~~ 281 (290)
T cd05045 269 EPDKRPTFADISK 281 (290)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=321.53 Aligned_cols=256 Identities=28% Similarity=0.407 Sum_probs=189.5
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhC-CCCceeEEEEEEec--CC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASD-QHPNIVRWYGVESD--QD 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~--~~ 540 (934)
.+.+.|.+.+.||+|+||.||++.. .+|+.||||++.+.. .....+|+. +++.+ +||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIM-FLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHH-HHHHhcCCCCccceeeeeccCCCc
Confidence 4566788889999999999999854 468899999885432 123456665 67777 99999999998865 34
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|+|||+|.++|.+++. ...+++..++.++.||+.||+
T Consensus 83 ~~~lv~e~~~~~L~~~~~-----------------------------------------~~~~~~~~~~~i~~qi~~~L~ 121 (337)
T cd07852 83 DIYLVFEYMETDLHAVIR-----------------------------------------ANILEDVHKRYIMYQLLKALK 121 (337)
T ss_pred eEEEEecccccCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 789999988776655441 113456677889999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++.+.......... ..
T Consensus 122 ~LH~~~i~H~dl~p~nill~~~~--~~kl~d~g~~~~~~~~~~~~~~~------------------------------~~ 169 (337)
T cd07852 122 YIHSGNVIHRDLKPSNILLNSDC--RVKLADFGLARSLSELEENPENP------------------------------VL 169 (337)
T ss_pred HHHHCCeecCCCCHHHEEEcCCC--cEEEeeccchhccccccccccCc------------------------------ch
Confidence 99999999999999999997665 49999999998765433211000 01
Q ss_pred ecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh--------------------
Q 002343 701 TVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD-------------------- 757 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~-------------------- 757 (934)
....||..|+|||++.+ ..++.++|||||||++|+|++| .+||....... ..+...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07852 170 TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG-KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATM 248 (337)
T ss_pred hcccccccccCceeeeccccccccchHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHh
Confidence 11458999999998865 4578999999999999999996 66765322111 000000
Q ss_pred ------cc----cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 ------RK----DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 ------~~----~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. .......+.++.+||.+||+.||++|||+.++++||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 249 LDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 00 00112246789999999999999999999999999999654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=302.82 Aligned_cols=242 Identities=29% Similarity=0.419 Sum_probs=187.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||.|+||.||++. ..|+.||||.+..... +...+|+. +++.++|+||+++++++.+.+..|+|||+|.
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGD-YRGQKVAVKCLKDDSTAAQAFLAEAS-VMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEE-ecCcEEEEEEeccchhHHHHHHHHHH-HHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 456778899999999999865 4589999999976543 34455665 7888899999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+++|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 84 ----------~~~L~~~~~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 126 (256)
T cd05039 84 ----------KGSLVDYLRSRG---------------------------RAVITLAQQLGFALDVCEGMEYLEEKNFVHR 126 (256)
T ss_pred ----------CCcHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccch
Confidence 344444433210 1246788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||+++.++ .+||+|||+++....... ...++..|+
T Consensus 127 di~p~Nili~~~~--~~~l~d~g~~~~~~~~~~--------------------------------------~~~~~~~~~ 166 (256)
T cd05039 127 DLAARNVLVSEDL--VAKVSDFGLAKEASQGQD--------------------------------------SGKLPVKWT 166 (256)
T ss_pred hcccceEEEeCCC--CEEEcccccccccccccc--------------------------------------cCCCccccc
Confidence 9999999997655 489999999987632211 023456799
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++....++.++|||||||++|++++.+..||....... ...+... ....+...++++.++|.+||..+|++||++
T Consensus 167 ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 246 (256)
T cd05039 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTF 246 (256)
T ss_pred CchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCH
Confidence 99999988899999999999999999985577876553332 2222221 222234456899999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.++++
T Consensus 247 ~~l~~ 251 (256)
T cd05039 247 KQLRE 251 (256)
T ss_pred HHHHH
Confidence 99985
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=303.55 Aligned_cols=247 Identities=24% Similarity=0.381 Sum_probs=186.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||.||++... +|+.||+|.+.... .+...+|+. +++.++|+||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~-~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEID-LLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHH-HHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 35788899999999999998554 79999999885321 223456665 77888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+ +|+|.+++..... ....+++.+++.++.||+.||+|||+.
T Consensus 81 ~e~~~----------~~~L~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~ 125 (267)
T cd08224 81 LELAD----------AGDLSRMIKHFKK-------------------------QKRLIPERTIWKYFVQLCSALEHMHSK 125 (267)
T ss_pred EecCC----------CCCHHHHHHHhcc-------------------------cCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 99655 4444444322100 023467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+||+++.++. ++|+|||+++.+....... ....|
T Consensus 126 ~i~h~dl~p~nil~~~~~~--~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~ 168 (267)
T cd08224 126 RIMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAA-----------------------------------HSLVG 168 (267)
T ss_pred CEecCCcChhhEEECCCCc--EEEeccceeeeccCCCccc-----------------------------------ceecC
Confidence 9999999999999976654 8999999987654321110 01358
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH---HHHH-Hhhcccccc-cCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER---DANI-VKDRKDLFL-VEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~~i-~~~~~~~~~-~~~~~e~~dLI~~~L~~ 780 (934)
++.|+|||.+.+..++.++|||||||++|+|++| .+||...... .... ........+ ...+.++.++|.+||..
T Consensus 169 ~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 247 (267)
T cd08224 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL-QSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINP 247 (267)
T ss_pred CccccCHHHhccCCCCchhcHHHHHHHHHHHHHC-CCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCC
Confidence 8899999999988899999999999999999997 5565432211 1111 111111112 24567899999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
+|++|||+.+|++
T Consensus 248 ~p~~Rp~~~~il~ 260 (267)
T cd08224 248 DPEKRPDISYVLQ 260 (267)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=312.05 Aligned_cols=253 Identities=17% Similarity=0.207 Sum_probs=177.5
Q ss_pred eecceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCChhH-----H------HHHHH--HHHHhCCCCceeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHHDV-----A------LKEIQ--NLIASDQHPNIVRW 532 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~~~-----~------~~Ei~--~ll~~l~HpNIV~l 532 (934)
..++.|.+.+.||+|+||+||++.... +..+|+|......... . ..++. ..+..+.|+||+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 456789999999999999999986543 4567777543221110 0 01111 12346789999999
Q ss_pred EEEEecCC----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHH
Q 002343 533 YGVESDQD----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (934)
Q Consensus 533 ~g~~~~~~----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 608 (934)
++++.... +.+++||++..++.+++.. ....++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~ 128 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLVENTKEIFKR----------------------------------------IKCKNKKLI 128 (294)
T ss_pred EEeeeEecCCceEEEEEEehhccCHHHHHHh----------------------------------------hccCCHHHH
Confidence 99766543 5678888666554433310 112356778
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhh
Q 002343 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688 (934)
Q Consensus 609 ~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (934)
+.++.|++.||+|||+++|+||||||+|||++.++ .++|+|||+|+.+............
T Consensus 129 ~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~--~~~l~DFGla~~~~~~~~~~~~~~~------------------ 188 (294)
T PHA02882 129 KNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN--RGYIIDYGIASHFIIHGKHIEYSKE------------------ 188 (294)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--cEEEEEcCCceeeccCCcccccccc------------------
Confidence 89999999999999999999999999999996554 4899999999877543221110000
Q ss_pred hccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHH-----HHhh--cc
Q 002343 689 CECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDAN-----IVKD--RK 759 (934)
Q Consensus 689 ~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~-----i~~~--~~ 759 (934)
......||+.|+|||++.+..++.++|||||||++|||++| .+||..... .... .... ..
T Consensus 189 ----------~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g-~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (294)
T PHA02882 189 ----------QKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI-KLPWKGFGHNGNLIHAAKCDFIKRLHEG 257 (294)
T ss_pred ----------cccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCccccchHHHHHhHHHHHHHhhhh
Confidence 00114699999999999999999999999999999999996 788864411 1110 1111 11
Q ss_pred cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 760 DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 760 ~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.......++++.+++..|+..+|++||+++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 258 KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1223345678999999999999999999999875
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=364.72 Aligned_cols=233 Identities=24% Similarity=0.332 Sum_probs=170.9
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
+...+.||+|+||+||++.. .+|+.||||++..... ...+|++ .++.++|||||+++|++.+++..|+|||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~-~l~~l~HpnIv~~~~~~~~~~~~~lv~E------ 763 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-IPSSEIA-DMGKLQHPNIVKLIGLCRSEKGAYLIHE------ 763 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-ccHHHHH-HHhhCCCCCcceEEEEEEcCCCCEEEEe------
Confidence 34456899999999999865 6789999999864332 2234444 6788899999999999999999999999
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH---HCCCccc
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH---EIGLIHR 630 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH---s~gIVHR 630 (934)
|+++|+|.++++ .+++.++.+++.||+.||+||| +.+|+||
T Consensus 764 ----y~~~g~L~~~l~--------------------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~ 807 (968)
T PLN00113 764 ----YIEGKNLSEVLR--------------------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807 (968)
T ss_pred ----CCCCCcHHHHHh--------------------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecC
Confidence 455566665542 1356778899999999999999 6699999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.+.. +++. ||.+.....+. ...||+.||
T Consensus 808 dlkp~Nil~~~~~~--~~~~-~~~~~~~~~~~---------------------------------------~~~~t~~y~ 845 (968)
T PLN00113 808 NLSPEKIIIDGKDE--PHLR-LSLPGLLCTDT---------------------------------------KCFISSAYV 845 (968)
T ss_pred CCCHHhEEECCCCc--eEEE-eccccccccCC---------------------------------------Ccccccccc
Confidence 99999999965544 5554 66544321110 135889999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH---HHHHHhh----------cccc------cccCCCHHHH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER---DANIVKD----------RKDL------FLVEHIPEAV 771 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~~i~~~----------~~~~------~~~~~~~e~~ 771 (934)
|||++.+..++.++|||||||++|||+|| ++||...... ....... ..+. ...+...++.
T Consensus 846 aPE~~~~~~~~~~sDv~S~Gvvl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (968)
T PLN00113 846 APETRETKDITEKSDIYGFGLILIELLTG-KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM 924 (968)
T ss_pred CcccccCCCCCcccchhhHHHHHHHHHhC-CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHH
Confidence 99999999999999999999999999996 6666432111 0000000 0000 0011123577
Q ss_pred HHHHHcccCCCCCCcCHHHHHcC
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+++.+||+.||++|||+.|+++.
T Consensus 925 ~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 925 NLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHHHhhCcCCchhCcCHHHHHHH
Confidence 89999999999999999999863
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=303.89 Aligned_cols=248 Identities=28% Similarity=0.384 Sum_probs=186.5
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC----h----hHHHHHHHHHHHhCCCCceeEEEEEEecC--CeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----H----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~----~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~ 542 (934)
.|.+.+.||+|+||.||++.. .+++.||+|.+.... . ....+|+. +++.++||||+++++++.+. +.+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~-~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQ-LLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHH-HHHHcCCCCcceEEEEEEcCCCCEE
Confidence 477889999999999999854 568999999875321 1 12344554 78889999999999998764 568
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+++||++. +++|.+++.. ...+++..++.++.||+.||.||
T Consensus 82 ~~v~e~~~----------~~~L~~~~~~-----------------------------~~~l~~~~~~~~~~~i~~al~~L 122 (264)
T cd06653 82 SIFVEYMP----------GGSIKDQLKA-----------------------------YGALTENVTRRYTRQILQGVSYL 122 (264)
T ss_pred EEEEEeCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999665 3334333321 23356778889999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+||+++.++ .++|+|||+++.+......... .+.
T Consensus 123 H~~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~~~~~~~~--------------------------------~~~ 168 (264)
T cd06653 123 HSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRIQTICMSGTG--------------------------------IKS 168 (264)
T ss_pred HhCCEecCCCCHHHEEEcCCC--CEEECccccccccccccccCcc--------------------------------ccc
Confidence 999999999999999997655 4899999999875432110000 011
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh-cccccccCCCHHHHHHHHHccc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD-RKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~-~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
..|+..|+|||++.+..++.++|||||||++|+|++| .+||.+..... ..+... .....+...++++.++|.+||+
T Consensus 169 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~ 247 (264)
T cd06653 169 VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTE-KPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV 247 (264)
T ss_pred cCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhC-CCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc
Confidence 4588999999999988899999999999999999996 77886543222 111111 1223345567899999999999
Q ss_pred CCCCCCcCHHHHHcCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff 797 (934)
+|..||++.+++.|||.
T Consensus 248 -~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 248 -EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred -CcccCccHHHHhcCCCC
Confidence 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=297.39 Aligned_cols=243 Identities=30% Similarity=0.501 Sum_probs=189.0
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
|...+.||+|++|.||++... +++.||+|++..... ....+|+. +++.++||||+++++++..++..|+++|+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQ-ILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHH-HHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 556789999999999998654 688999999876542 34455655 7788899999999999999999999999666
Q ss_pred -CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 551 -~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
++|.+++ ... ...+++..+..++.|++.||+|||++|++|
T Consensus 81 ~~~L~~~~-----------~~~----------------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 81 GGSLKDLL-----------KST----------------------------NQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred CCcHHHHH-----------hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 3444433 211 134678889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||+|+||+++.++ .++|+|||++........ . . ...|+..|
T Consensus 122 ~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~~--~--~--------------------------------~~~~~~~~ 163 (253)
T cd05122 122 RDIKAANILLTSDG--EVKLIDFGLSAQLSDTKA--R--N--------------------------------TMVGTPYW 163 (253)
T ss_pred CCCCHHHEEEccCC--eEEEeecccccccccccc--c--c--------------------------------ceecCCcc
Confidence 99999999997654 499999999987654321 0 0 13588899
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcccccccC--CCHHHHHHHHHcccCCCCCC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRKDLFLVE--HIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~~~~~~~--~~~e~~dLI~~~L~~DP~~R 785 (934)
+|||.+.+..++.++|||||||++|+|++| .+||... ..... ............. .+.++.++|.+||+.||++|
T Consensus 164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 242 (253)
T cd05122 164 MAPEVINGKPYDYKADIWSLGITAIELAEG-KPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKR 242 (253)
T ss_pred cCHHHHcCCCCCccccHHHHHHHHHHHHhC-CCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhC
Confidence 999999988899999999999999999996 5676544 22222 2221111111112 26789999999999999999
Q ss_pred cCHHHHHcCCC
Q 002343 786 PKAQNVLNHPF 796 (934)
Q Consensus 786 PTa~evL~HPf 796 (934)
||+.++++|||
T Consensus 243 ~t~~~~l~~~~ 253 (253)
T cd05122 243 PTAEQLLKHPF 253 (253)
T ss_pred CCHHHHhcCCC
Confidence 99999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=337.44 Aligned_cols=271 Identities=19% Similarity=0.199 Sum_probs=169.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-c----CcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEE------EecCCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-E----GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV------ESDQDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~----g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~------~~~~~~ 541 (934)
+.|.+.+.||+|+||+||++... + +..||||++..........+. .+....+.+++.++.. ...+..
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc
Confidence 56888999999999999998553 4 689999998644322221111 1122223333322221 245678
Q ss_pred EEEEEecccC-ChhhhHHhhcC--CHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSG--SFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~G--sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.||||||+.+ +|.+++....- .+.+++... .. .+..........+..++.||+.|
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~--------------------~~--~l~~~~~r~~~~i~~i~~qll~a 267 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGK--------------------VQ--DLPKGLERENKIIQTIMRQILFA 267 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccc--------------------hh--hccccchhhHHHHHHHHHHHHHH
Confidence 9999997663 45555432110 011111100 00 00001112235677899999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||+++||||||||+|||++.+. ..+||+|||+|+.+........
T Consensus 268 L~yLH~~gIiHRDLKP~NILl~~~~-~~~KL~DFGlA~~l~~~~~~~~-------------------------------- 314 (566)
T PLN03225 268 LDGLHSTGIVHRDVKPQNIIFSEGS-GSFKIIDLGAAADLRVGINYIP-------------------------------- 314 (566)
T ss_pred HHHHHHCCEEeCcCCHHHEEEeCCC-CcEEEEeCCCccccccccccCC--------------------------------
Confidence 9999999999999999999997532 3599999999987654322111
Q ss_pred eeecCCCCCccccchhcccC----------------------CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHh
Q 002343 699 FFTVGYGSSGWQAPEQLLQG----------------------RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK 756 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~----------------------~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~ 756 (934)
...+||+.|||||.+... .++.++|||||||+||||+++ ..++..........+.
T Consensus 315 --~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~-~~~~~~~~~~~~~~l~ 391 (566)
T PLN03225 315 --KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFP-NLRSDSNLIQFNRQLK 391 (566)
T ss_pred --cccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhC-cCCCchHHHHHHHHHH
Confidence 125689999999976432 234567999999999999985 4444433222111111
Q ss_pred hc--------c---cccc----------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 757 DR--------K---DLFL----------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 757 ~~--------~---~~~~----------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
.. . .... .....+..|||.+||+.||++|||+.++|+||||......
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 392 RNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred hcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 10 0 0000 0112345689999999999999999999999999776543
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=317.88 Aligned_cols=252 Identities=22% Similarity=0.269 Sum_probs=178.4
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
+.+|.|+++.|+. +..+++.||||++.... .+...+|+. +++.++||||+++++++.+.+..|++||||+
T Consensus 8 ~~~~~~~~v~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~--- 82 (314)
T cd08216 8 KCFEDLMIVHLAK-HKPTNTLVAVKKINLDSCSKEDLKLLQQEII-TSRQLQHPNILPYVTSFIVDSELYVVSPLMA--- 82 (314)
T ss_pred HhhcCCceEEEEE-ecCCCCEEEEEEEeccccchhHHHHHHHHHH-HHHhcCCcchhhhhheeecCCeEEEEEeccC---
Confidence 3445555555554 34479999999986542 124455665 7788899999999999999999999999665
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
+|+|.+++... ....+++..+..++.|++.||+|||+++|+|||||
T Consensus 83 -------~~~l~~~l~~~---------------------------~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk 128 (314)
T cd08216 83 -------YGSCEDLLKTH---------------------------FPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVK 128 (314)
T ss_pred -------CCCHHHHHHHh---------------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 33444433221 02346778889999999999999999999999999
Q ss_pred CCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 634 P~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
|+|||++.++. +||+|||.+..+........... .......++..|+|||
T Consensus 129 ~~Nili~~~~~--~kl~d~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~y~aPE 178 (314)
T cd08216 129 ASHILLSGDGK--VVLSGLRYSVSMIKHGKRQRVVH----------------------------DFPKSSVKNLPWLSPE 178 (314)
T ss_pred cceEEEecCCc--eEEecCccceeeccccccccccc----------------------------cccccccccccccCHH
Confidence 99999976654 89999999886643221100000 0011245788999999
Q ss_pred hcccC--CCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcc------------------------------
Q 002343 714 QLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRK------------------------------ 759 (934)
Q Consensus 714 ~l~~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~------------------------------ 759 (934)
++.+. .++.++|||||||++|||++| ..||........ .......
T Consensus 179 ~~~~~~~~~~~~~Diws~G~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (314)
T cd08216 179 VLQQNLQGYNEKSDIYSVGITACELANG-HVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRD 257 (314)
T ss_pred HhcCCCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhh
Confidence 98763 578999999999999999995 677764322211 1111000
Q ss_pred ---cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 ---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 ---~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.......+.++.+||.+||+.||++|||++++|+||||...
T Consensus 258 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 258 SVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred hhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00000112578899999999999999999999999999543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=317.31 Aligned_cols=264 Identities=22% Similarity=0.326 Sum_probs=190.0
Q ss_pred cceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEec
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESD 538 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~ 538 (934)
..+|.+.+.||+|+||.||++... .+..||+|.+..... ....+|++ ++..+ +||||+++++++.+
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEME-MMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHH-HHHhhcCCCCeeeeeEEEcc
Confidence 456889999999999999997432 124799998864332 23456665 55666 89999999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
++..|++|||+. +|+|.+++........ .............++..+++.++.||+.|
T Consensus 90 ~~~~~lv~e~~~----------~g~L~~~l~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~~~qi~~a 146 (334)
T cd05100 90 DGPLYVLVEYAS----------KGNLREYLRARRPPGM-------------DYSFDTCKLPEEQLTFKDLVSCAYQVARG 146 (334)
T ss_pred CCceEEEEecCC----------CCcHHHHHHhcCCccc-------------ccccccccCccccCCHHHHHHHHHHHHHH
Confidence 999999999654 4444444432210000 00000000012346778899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 147 l~~LH~~givH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~------------------------------- 193 (334)
T cd05100 147 MEYLASQKCIHRDLAARNVLVTEDN--VMKIADFGLARDVHNIDYYKKT------------------------------- 193 (334)
T ss_pred HHHHHHCCeeccccccceEEEcCCC--cEEECCcccceecccccccccc-------------------------------
Confidence 9999999999999999999997665 4899999999876432211100
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~ 776 (934)
....++..|+|||++.+..++.++|||||||++|||++++.+||.... ......+... ....+...+.++.+||.+
T Consensus 194 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 271 (334)
T cd05100 194 --TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRE 271 (334)
T ss_pred --cCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 012356789999999999999999999999999999996677876543 3333333222 222334456799999999
Q ss_pred cccCCCCCCcCHHHHHcC
Q 002343 777 LLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~H 794 (934)
||+.+|++||++.+++++
T Consensus 272 cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 272 CWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HcccChhhCcCHHHHHHH
Confidence 999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=310.15 Aligned_cols=244 Identities=28% Similarity=0.463 Sum_probs=186.8
Q ss_pred EEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 476 VFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.+.||.|++|.||++.. .+++.||+|++..... ....+|++ +++.++||||+++++++.+++..|+|||||
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIK-LLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHH-HHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 4467899999999999854 4688999999865432 23455655 677889999999999999999999999988
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.++|.+.+... ...+++.++..++.||+.||+|||+++|+|
T Consensus 81 ~~~l~~~l~~~---------------------------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (283)
T cd05118 81 DTDLYKLIKDR---------------------------------------QRGLPESLIKSYLYQLLQGLAFCHSHGILH 121 (283)
T ss_pred CCCHHHHHHhh---------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 77665544210 134577889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
+||||+||+++.++ .+||+|||.+..+....... ....++..|
T Consensus 122 ~dl~p~nili~~~~--~~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~~~~ 164 (283)
T cd05118 122 RDLKPENLLINTEG--VLKLADFGLARSFGSPVRPY-----------------------------------THYVVTRWY 164 (283)
T ss_pred cCcCHHHEEECCCC--cEEEeeeeeeEecCCCcccc-----------------------------------cCccCcccc
Confidence 99999999997655 49999999998765432100 013478899
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcc-------------------------c-
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRK-------------------------D- 760 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~-------------------------~- 760 (934)
+|||.+.+. .++.++|||||||++|+|++| ++||...... . ..+..... .
T Consensus 165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd05118 165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSR-RPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGM 243 (283)
T ss_pred cCcHHHhcCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcccccc
Confidence 999999876 689999999999999999997 6777543211 1 11100000 0
Q ss_pred ---ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 761 ---LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 761 ---~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
......+.++++||.+||+.||.+||++.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 244 PLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0011245689999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=345.04 Aligned_cols=272 Identities=24% Similarity=0.280 Sum_probs=187.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+++..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~-ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAK-IAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHH-HHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 4578889999999999999854 4689999999865321 23455655 78889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+ +|+|.+++......... ..-.....+...++.++.||+.||+|||++
T Consensus 81 MEY~e----------GGSL~~lL~s~~~~~~l------------------~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~ 132 (932)
T PRK13184 81 MPYIE----------GYTLKSLLKSVWQKESL------------------SKELAEKTSVGAFLSIFHKICATIEYVHSK 132 (932)
T ss_pred EEcCC----------CCCHHHHHHHhhhcccc------------------chhhhcccCHHHHHHHHHHHHHHHHHHHHC
Confidence 99655 44444444321100000 000123456678899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+|+.................. .+ ..........+|
T Consensus 133 GIIHRDLKPeNILLd~dg~--vKLiDFGLAk~i~~~~~~~~~l~~~~~~---------------s~--~s~~t~~g~~vG 193 (932)
T PRK13184 133 GVLHRDLKPDNILLGLFGE--VVILDWGAAIFKKLEEEDLLDIDVDERN---------------IC--YSSMTIPGKIVG 193 (932)
T ss_pred CccccCCchheEEEcCCCC--EEEEecCcceeccccccccccccccccc---------------cc--ccccccCCCCCC
Confidence 9999999999999977665 8999999998763221110000000000 00 000000112469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHh---hccc-ccccCCCHHHHHHHHHcccCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK---DRKD-LFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~---~~~~-~~~~~~~~e~~dLI~~~L~~D 781 (934)
|+.|||||++.+..++.++|||||||++|||+|| .+||............ .... ......++.+.+++.+||+.|
T Consensus 194 T~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG-~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~D 272 (932)
T PRK13184 194 TPDYMAPERLLGVPASESTDIYALGVILYQMLTL-SFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVD 272 (932)
T ss_pred CCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHC-CCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCC
Confidence 9999999999999999999999999999999996 6677543222111111 0001 111245678999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||+..+.+.
T Consensus 273 P~kR~ss~eeLl 284 (932)
T PRK13184 273 PAERYSSVQELK 284 (932)
T ss_pred hhhCcCHHHHHH
Confidence 999987655443
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=313.81 Aligned_cols=254 Identities=24% Similarity=0.295 Sum_probs=192.6
Q ss_pred eecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecC--ChhHHHHHHHHHHHhCCC-Cc----eeEEEEEEecCCe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQH-PN----IVRWYGVESDQDF 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~--~~~~~~~Ei~~ll~~l~H-pN----IV~l~g~~~~~~~ 541 (934)
.+.++|.+.+.+|+|.||.|..+ +...+..||||+++.. ..+.+.-|++.+.+...+ || +|.+.++|.-.++
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 45778999999999999999886 4445899999998643 235667777744443333 22 8888999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|||+|+++.++.|++..+ +..++|..+++.|++|++.+++|
T Consensus 166 iCivfellG~S~~dFlk~N--------------------------------------~y~~fpi~~ir~m~~QL~~sv~f 207 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKEN--------------------------------------NYIPFPIDHIRHMGYQLLESVAF 207 (415)
T ss_pred eEEEEeccChhHHHHhccC--------------------------------------CccccchHHHHHHHHHHHHHHHH
Confidence 9999998777766655211 13467889999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecC---------C---------CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHH
Q 002343 622 LHEIGLIHRDLKPQNVLISKD---------K---------SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSIL 683 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d---------~---------~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (934)
||+.+++|-||||+|||+.+. . +..+||+|||.|+.-.+..+
T Consensus 208 Lh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs-------------------- 267 (415)
T KOG0671|consen 208 LHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHS-------------------- 267 (415)
T ss_pred HHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcc--------------------
Confidence 999999999999999998531 1 23589999999987655432
Q ss_pred hhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH--------
Q 002343 684 LKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV-------- 755 (934)
Q Consensus 684 ~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~-------- 755 (934)
..+.|..|.|||++++-.++.++||||+||||+|+.||...++.....+....+
T Consensus 268 ------------------~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P 329 (415)
T KOG0671|consen 268 ------------------TIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIP 329 (415)
T ss_pred ------------------eeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCc
Confidence 156799999999999999999999999999999999986666554322211100
Q ss_pred ----hhc--------cccccc-----------------------C---CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 756 ----KDR--------KDLFLV-----------------------E---HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 756 ----~~~--------~~~~~~-----------------------~---~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
... ..+.++ . ...++.|||++||..||.+|+|+.|+|.||||
T Consensus 330 ~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF 409 (415)
T KOG0671|consen 330 SRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFF 409 (415)
T ss_pred HHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHh
Confidence 000 000000 0 01367899999999999999999999999999
Q ss_pred CC
Q 002343 798 WT 799 (934)
Q Consensus 798 ~~ 799 (934)
..
T Consensus 410 ~~ 411 (415)
T KOG0671|consen 410 AR 411 (415)
T ss_pred hc
Confidence 64
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=309.23 Aligned_cols=266 Identities=22% Similarity=0.275 Sum_probs=188.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||.||++... ++..||+|++..... ....+|+. +++.++||||+++++++.+++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~-~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA-LMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHH-HHHhcCCCchheEEEEEcCCCcc
Confidence 34777889999999999997542 467899999875433 23444555 78889999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhh-HhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI-ELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
|++||+|.+ +|.+++............. ...... .......+++.+++.++.||+.||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~ 144 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSH-------------------STSSARKCGLNPLPLSCTEQLCIAKQVAAGMA 144 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccc-------------------cccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 999996663 4555443211100000000 000000 0011234788899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+++++||||||+|||++.++ .++|+|||+++.+.........
T Consensus 145 ~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~--------------------------------- 189 (288)
T cd05050 145 YLSERKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKAS--------------------------------- 189 (288)
T ss_pred HHHhCCeecccccHhheEecCCC--ceEECccccceecccCcccccc---------------------------------
Confidence 99999999999999999997665 4899999998865433211100
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhccc-ccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKD-LFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~-~~~~~~~~e~~dLI~~~L 778 (934)
....++..|+|||++.+..++.++|||||||++|||++.+..||. .........+..... ..+...+.++.+||.+||
T Consensus 190 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 269 (288)
T cd05050 190 ENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCW 269 (288)
T ss_pred CCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 002346679999999988999999999999999999985566664 333333333322222 123345689999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
+.||.+|||+.|+++
T Consensus 270 ~~~p~~Rpt~~el~~ 284 (288)
T cd05050 270 SKLPSDRPSFASINR 284 (288)
T ss_pred ccCcccCCCHHHHHH
Confidence 999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=306.15 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=188.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|...+.||+|+||+||++... ..+.||+|.+.....+ ...+|+. +++.++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELD-MFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHH-HHHhcCCcceeeeEEEECCCCcc
Confidence 34667889999999999998543 3568999988654332 3455655 77888999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||+|+ +|+|.+++....... ...+...+++.++..++.||+.||+||
T Consensus 84 ~lv~e~~~----------~~~L~~~i~~~~~~~--------------------~~~~~~~l~~~~~~~~~~~l~~~l~~L 133 (275)
T cd05046 84 YMILEYTD----------LGDLKQFLRATKSKD--------------------EKLKPPPLSTKQKVALCTQIALGMDHL 133 (275)
T ss_pred eEEEEecC----------CCcHHHHHHhccccc--------------------ccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 99999765 334444433211000 000123578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++|+||||||+|||++.++. ++|+|||+++.......... ..
T Consensus 134 H~~~i~H~dlkp~Nili~~~~~--~~l~~~~~~~~~~~~~~~~~----------------------------------~~ 177 (275)
T cd05046 134 SNARFVHRDLAARNCLVSSQRE--VKVSLLSLSKDVYNSEYYKL----------------------------------RN 177 (275)
T ss_pred hhcCcccCcCccceEEEeCCCc--EEEcccccccccCccccccc----------------------------------CC
Confidence 9999999999999999977654 89999999875432211100 01
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc--cccccCCCHHHHHHHHHccc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK--DLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~--~~~~~~~~~e~~dLI~~~L~ 779 (934)
..++..|+|||.+.+..++.++|||||||++|++++++.+||....... ........ .......+..+.+++.+||+
T Consensus 178 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 257 (275)
T cd05046 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWA 257 (275)
T ss_pred ceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcC
Confidence 3467789999999888889999999999999999997788886543322 22222111 11223456789999999999
Q ss_pred CCCCCCcCHHHHHcC
Q 002343 780 PNPDLRPKAQNVLNH 794 (934)
Q Consensus 780 ~DP~~RPTa~evL~H 794 (934)
.||.+||++.+++++
T Consensus 258 ~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 258 VNPKDRPSFSELVSA 272 (275)
T ss_pred CCcccCCCHHHHHHH
Confidence 999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=299.14 Aligned_cols=249 Identities=27% Similarity=0.440 Sum_probs=192.3
Q ss_pred EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|+||.||++.. .+++.||+|++..... ....+|++ +++.++|||++++++.+.+.+..++|+|+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVK-ILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHH-HHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 66788999999999999854 4689999999875432 23445554 77888999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|++ ++|.+++.... .....+++.++..++.|++.||+|||++|++
T Consensus 81 ~~~----------~~L~~~l~~~~-------------------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~ 125 (258)
T cd08215 81 ADG----------GDLSQKIKKQK-------------------------KEGKPFPEEQILDWFVQLCLALKYLHSRKIL 125 (258)
T ss_pred cCC----------CcHHHHHHHhh-------------------------ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 653 34444332210 0124578889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||+|+||+++.++ .++|+|||++......... .....|++.
T Consensus 126 H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~~~~-----------------------------------~~~~~~~~~ 168 (258)
T cd08215 126 HRDIKPQNIFLTSNG--LVKLGDFGISKVLSSTVDL-----------------------------------AKTVVGTPY 168 (258)
T ss_pred cccCChHHeEEcCCC--cEEECCccceeecccCcce-----------------------------------ecceeeeec
Confidence 999999999997655 4899999999765443210 011358899
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||.+.+..++.++||||+|+++|+|++| .+||.... ..... .........+...+.++.+++.+||..+|++||
T Consensus 169 y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 247 (258)
T cd08215 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTL-KHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERP 247 (258)
T ss_pred ccChhHhccCCCCccccHHHHHHHHHHHHcC-CCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 9999999988899999999999999999996 67775542 22222 222222222334567999999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
|+.++|+||||
T Consensus 248 ~~~~ll~~~~~ 258 (258)
T cd08215 248 SIAQILQSPFI 258 (258)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=303.23 Aligned_cols=247 Identities=29% Similarity=0.424 Sum_probs=196.4
Q ss_pred eeecccCcEEEEEE-EEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCCh
Q 002343 479 KEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSL 553 (934)
Q Consensus 479 ~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL 553 (934)
.+||.|+||+|++- +...|+..|||++..... ...++|....++.-+.||||++||.+..++..||.||+++.+|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~Sl 149 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISL 149 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhH
Confidence 47999999999985 667799999999975433 3556777778889999999999999999999999999988876
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDL 632 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~gIVHRDL 632 (934)
+-+. + ++. -.+...+|+..+-.|..-++.||.||-+ .+|||||+
T Consensus 150 DklY-k-------~vy---------------------------~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDv 194 (361)
T KOG1006|consen 150 DKLY-K-------RVY---------------------------SVQKSRIPENILGHITVATVDALDYLKEELKIIHRDV 194 (361)
T ss_pred HHHH-H-------HHH---------------------------HHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccC
Confidence 5442 2 111 1124567888888999999999999985 68999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
||+|||++..| .+||||||+|..+..... .|..+|...||||
T Consensus 195 KPSNILldr~G--~vKLCDFGIcGqLv~SiA------------------------------------kT~daGCrpYmAP 236 (361)
T KOG1006|consen 195 KPSNILLDRHG--DVKLCDFGICGQLVDSIA------------------------------------KTVDAGCRPYMAP 236 (361)
T ss_pred ChhheEEecCC--CEeeecccchHhHHHHHH------------------------------------hhhccCCccccCh
Confidence 99999996555 499999999987654321 1225689999999
Q ss_pred hhccc--CCCcccccccchhhhhHHhhcCCCCCCCCc---hhHHHHHHhhcccccc-----cCCCHHHHHHHHHcccCCC
Q 002343 713 EQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKDRKDLFL-----VEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 713 E~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~---~~~~~~i~~~~~~~~~-----~~~~~e~~dLI~~~L~~DP 782 (934)
|.+.. ..|+-++||||||++|||++|| ..||... +++...++...++... .+.+..++.+|..||.+|-
T Consensus 237 ERi~p~~~gyDiRSDvWSLGITL~EvAtG-~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~ 315 (361)
T KOG1006|consen 237 ERIDPSDKGYDIRSDVWSLGITLYEVATG-NFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDR 315 (361)
T ss_pred hccCCccCCcchhhhhhhhcceEeeeecC-CCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhccc
Confidence 99963 3589999999999999999996 7787653 3444455554443321 2356789999999999999
Q ss_pred CCCcCHHHHHcCCCCCC
Q 002343 783 DLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~ 799 (934)
..||...+++++||+..
T Consensus 316 ~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 316 SDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ccCcchhhhhcCchhhh
Confidence 99999999999999854
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=302.05 Aligned_cols=241 Identities=25% Similarity=0.372 Sum_probs=183.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.|.+.+.||+|+||.||.+ ..+++.||+|.+...... ...+|+. ++..++||||+++++++..+ ..|++||||.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~-~~~~~~~~iK~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~- 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQG-EYTGQKVAVKNIKCDVTAQAFLEETA-VMTKLHHKNLVRLLGVILHN-GLYIVMELMS- 81 (254)
T ss_pred HHceeeeeeccCCCCceEec-ccCCCceEEEeecCcchHHHHHHHHH-HHHhCCCCCcCeEEEEEcCC-CcEEEEECCC-
Confidence 45778899999999999985 468889999998654333 3455555 77889999999999998765 4799999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.+++... ....+++..++.++.|++.||+|||+.|++|||
T Consensus 82 ---------~~~L~~~l~~~---------------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~d 125 (254)
T cd05083 82 ---------KGNLVNFLRTR---------------------------GRALVSVIQLLQFSLDVAEGMEYLESKKLVHRD 125 (254)
T ss_pred ---------CCCHHHHHHhc---------------------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 34444443321 012357778899999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+|||++.++ .+||+|||+++....... ....+..|+|
T Consensus 126 l~p~nili~~~~--~~kl~Dfg~~~~~~~~~~--------------------------------------~~~~~~~y~~ 165 (254)
T cd05083 126 LAARNILVSEDG--VAKVSDFGLARVGSMGVD--------------------------------------NSKLPVKWTA 165 (254)
T ss_pred cCcceEEEcCCC--cEEECCCccceeccccCC--------------------------------------CCCCCceecC
Confidence 999999997655 499999999875432110 0124567999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||.+.+..++.++|||||||++|+|++++.+||...... ....+... ........++++.+++.+||+.+|++||+++
T Consensus 166 pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 245 (254)
T cd05083 166 PEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFH 245 (254)
T ss_pred HHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999998899999999999999999998668888654322 22222221 2222334567899999999999999999999
Q ss_pred HHHc
Q 002343 790 NVLN 793 (934)
Q Consensus 790 evL~ 793 (934)
+++.
T Consensus 246 ~l~~ 249 (254)
T cd05083 246 KLRE 249 (254)
T ss_pred HHHH
Confidence 9875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=310.44 Aligned_cols=244 Identities=26% Similarity=0.430 Sum_probs=186.7
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChh
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
..||+|+||.||++.. .+|+.||||++..... ....+|+. +++.++||||+++++.+...+..|+|||||.+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~--- 101 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVMEFLEG--- 101 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHH-HHHhcCCcchhheeeEEEeCCEEEEEEecCCC---
Confidence 5799999999999854 5789999998753322 23455665 77889999999999999999999999996654
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKP 634 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP 634 (934)
++|.+++. ...+++..+..++.|++.||+|||++||+||||||
T Consensus 102 -------~~L~~~~~------------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p 144 (292)
T cd06657 102 -------GALTDIVT------------------------------HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKS 144 (292)
T ss_pred -------CcHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 33333221 22356778899999999999999999999999999
Q ss_pred CeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchh
Q 002343 635 QNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714 (934)
Q Consensus 635 ~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~ 714 (934)
+||+++.++ +++|+|||++..+....... ....|++.|+|||.
T Consensus 145 ~Nilv~~~~--~~~l~dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~~pE~ 187 (292)
T cd06657 145 DSILLTHDG--RVKLSDFGFCAQVSKEVPRR-----------------------------------KSLVGTPYWMAPEL 187 (292)
T ss_pred HHEEECCCC--CEEEcccccceecccccccc-----------------------------------cccccCccccCHHH
Confidence 999997665 48999999987654321100 01358899999999
Q ss_pred cccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhccc-c--cccCCCHHHHHHHHHcccCCCCCCcCHHH
Q 002343 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKD-L--FLVEHIPEAVDLFTRLLDPNPDLRPKAQN 790 (934)
Q Consensus 715 l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~-~--~~~~~~~e~~dLI~~~L~~DP~~RPTa~e 790 (934)
+.+..++.++||||+||++|+|++| .+||... .......+..... . .....++++.+++.+||+.||.+||++.+
T Consensus 188 ~~~~~~~~~~Dv~slGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ 266 (292)
T cd06657 188 ISRLPYGPEVDIWSLGIMVIEMVDG-EPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 266 (292)
T ss_pred hcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHH
Confidence 9888899999999999999999996 5666433 2222222221111 1 12234678999999999999999999999
Q ss_pred HHcCCCCCCcc
Q 002343 791 VLNHPFFWTAD 801 (934)
Q Consensus 791 vL~HPff~~~~ 801 (934)
+++||||....
T Consensus 267 ll~~~~~~~~~ 277 (292)
T cd06657 267 LLKHPFLAKAG 277 (292)
T ss_pred HhcChHHhccC
Confidence 99999995543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.52 Aligned_cols=245 Identities=29% Similarity=0.491 Sum_probs=183.8
Q ss_pred EEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|++|+||++... +++.||||++..... ....+|+. .+..++ ||||+++++++.+++..|+|||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVK-SLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHH-HHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 456788999999999998654 578999999865432 23345665 455566 99999999999999999999998
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++.. . ....+++.+++.++.|++.||.|||++||+
T Consensus 80 ~~~~l~~~~~~-----------~---------------------------~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 121 (283)
T cd07830 80 MEGNLYQLMKD-----------R---------------------------KGKPFSESVIRSIIYQILQGLAHIHKHGFF 121 (283)
T ss_pred CCCCHHHHHHh-----------c---------------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 76665554421 0 012467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||||+||+++.++ .++|+|||+++........ +...|+..
T Consensus 122 H~dl~~~ni~i~~~~--~~~l~d~~~~~~~~~~~~~------------------------------------~~~~~~~~ 163 (283)
T cd07830 122 HRDLKPENLLVSGPE--VVKIADFGLAREIRSRPPY------------------------------------TDYVSTRW 163 (283)
T ss_pred cCCCChhhEEEcCCC--CEEEeecccceeccCCCCc------------------------------------CCCCCccc
Confidence 999999999997654 4999999999865432211 01357889
Q ss_pred cccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhh------------------c-------c-
Q 002343 709 WQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKD------------------R-------K- 759 (934)
Q Consensus 709 Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~------------------~-------~- 759 (934)
|+|||++.+ ..++.++|||||||++|+|++| .+||..... .. ..+... . .
T Consensus 164 ~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd07830 164 YRAPEILLRSTSYSSPVDIWALGCIMAELYTL-RPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAP 242 (283)
T ss_pred ccCceeeecCcCcCCccchhhHHHHHHHHHhC-CCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccc
Confidence 999998854 4578999999999999999997 566643221 11 111000 0 0
Q ss_pred ---cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 ---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 ---~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
........+++.+||.+||+.||++|||+.|++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 243 TSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00011224789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=304.37 Aligned_cols=244 Identities=25% Similarity=0.322 Sum_probs=174.8
Q ss_pred eeecccCcEEEEEEEEe---cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.||+|+||.||++... .+..+|+|.+..... ....+|+. +++.++||||+++++++.+....|+|||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-- 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQ-PYRSLQHSNLLQCLGQCTEVTPYLLVMEFC-- 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHH-HHHhCCCCCEeeEEEEEcCCCCcEEEEECC--
Confidence 36999999999998543 346799998865432 13344554 788899999999999999999999999955
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
.+|+|.+++...... .....++..++.++.|++.||+|||+++|+|||
T Consensus 78 --------~~g~L~~~l~~~~~~------------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d 125 (269)
T cd05087 78 --------PLGDLKGYLRSCRKA------------------------ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSD 125 (269)
T ss_pred --------CCCcHHHHHHHhhhc------------------------ccccccHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence 445555555432110 012235567788999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||+++.++ .+||+|||+++........... ....|+..|+|
T Consensus 126 lkp~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~---------------------------------~~~~~~~~y~a 170 (269)
T cd05087 126 LALRNCLLTADL--TVKIGDYGLSHNKYKEDYYVTP---------------------------------DQLWVPLRWIA 170 (269)
T ss_pred cCcceEEEcCCC--cEEECCccccccccCcceeecC---------------------------------CCcCCcccccC
Confidence 999999997654 5999999998754322111000 11357889999
Q ss_pred chhcccC-------CCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhc-c----cccccCCCHHHHHHHHHc
Q 002343 712 PEQLLQG-------RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDR-K----DLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 712 PE~l~~~-------~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~-~----~~~~~~~~~e~~dLI~~~ 777 (934)
||++.+. .++.++|||||||++|||++.|.+||........ ...... . +......++++.+++.+|
T Consensus 171 PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 250 (269)
T cd05087 171 PELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFC 250 (269)
T ss_pred HhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHH
Confidence 9998642 3578999999999999999745778865433222 111111 1 111123457889999999
Q ss_pred ccCCCCCCcCHHHHHc
Q 002343 778 LDPNPDLRPKAQNVLN 793 (934)
Q Consensus 778 L~~DP~~RPTa~evL~ 793 (934)
+ .+|++|||+++|+.
T Consensus 251 ~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 251 W-LQPEQRPSAEEVHL 265 (269)
T ss_pred h-cCcccCCCHHHHHH
Confidence 8 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=302.73 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=184.5
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cC---cEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EG---RSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g---~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.|.+.+.||+|+||+||++... ++ ..||||.+.....+ ....|+. +++.++||||+++++++.+++..|+|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS-IMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHH-HHHhCCCcCcceEEEEECCCCceEEE
Confidence 3677899999999999998553 33 36999998754322 3344554 77889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||+. +|+|.+++... ...+++.+++.++.|++.||+|||++
T Consensus 84 ~e~~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~~l~~al~~lH~~ 125 (269)
T cd05065 84 TEFME----------NGALDSFLRQN----------------------------DGQFTVIQLVGMLRGIAAGMKYLSEM 125 (269)
T ss_pred EecCC----------CCcHHHHHhhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99554 44454444321 12356788899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|++||||||+|||++.++ .+||+|||+++.+............ ....+
T Consensus 126 g~~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~------------------------------~~~~~ 173 (269)
T cd05065 126 NYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSS------------------------------LGGKI 173 (269)
T ss_pred CEeecccChheEEEcCCC--cEEECCCccccccccCccccccccc------------------------------cCCCc
Confidence 999999999999996544 5999999998866443221110000 00123
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
+..|+|||++.+..++.++|||||||++||+++.+.+||.... ......+... ....+...+.++.+++.+||+.+|.
T Consensus 174 ~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 253 (269)
T cd05065 174 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRN 253 (269)
T ss_pred ceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChh
Confidence 4679999999999999999999999999999874577775433 2222222221 2222345567899999999999999
Q ss_pred CCcCHHHHHc
Q 002343 784 LRPKAQNVLN 793 (934)
Q Consensus 784 ~RPTa~evL~ 793 (934)
+||++.++++
T Consensus 254 ~Rp~~~~i~~ 263 (269)
T cd05065 254 ARPKFGQIVS 263 (269)
T ss_pred hCcCHHHHHH
Confidence 9999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=307.37 Aligned_cols=251 Identities=26% Similarity=0.370 Sum_probs=187.7
Q ss_pred EEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~ 542 (934)
|.+.+.||+|+||+||++.. .+++.||||.+.+... +...+|++ ++..+ +||||+++++.+..+...
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~-~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQ-VLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHH-HHHhccCCcchhhhheeeecCCEE
Confidence 56778999999999998743 3578999999864321 22345655 55555 799999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||. +|+|.+++.. ...+++..++.++.|++.||+||
T Consensus 81 ~lv~e~~~----------~~~L~~~~~~-----------------------------~~~~~~~~~~~~~~ql~~~l~~l 121 (288)
T cd05583 81 HLILDYVN----------GGELFTHLYQ-----------------------------REHFTESEVRVYIAEIVLALDHL 121 (288)
T ss_pred EEEEecCC----------CCcHHHHHhh-----------------------------cCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999554 4455444421 23356778889999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+.+++||||||+||+++.++ .++|+|||+++.+........ ..
T Consensus 122 H~~~~~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~----------------------------------~~ 165 (288)
T cd05583 122 HQLGIIYRDIKLENILLDSEG--HVVLTDFGLSKEFLAEEEERA----------------------------------YS 165 (288)
T ss_pred HHCCeeccCCCHHHeEECCCC--CEEEEECcccccccccccccc----------------------------------cc
Confidence 999999999999999997655 489999999877544321110 01
Q ss_pred CCCCCccccchhcccCC--CcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccccccCCCHHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGR--QTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~~~~~~~~e~~dLI~ 775 (934)
..|+..|+|||.+.+.. .+.++||||||+++|+|++| ..||.... ..............+....+++.++|.
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 244 (288)
T cd05583 166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG-ASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQ 244 (288)
T ss_pred ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhC-CCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHH
Confidence 35889999999987665 68899999999999999996 66764321 111111112222233445688999999
Q ss_pred HcccCCCCCCcC---HHHHHcCCCCCCccc
Q 002343 776 RLLDPNPDLRPK---AQNVLNHPFFWTADT 802 (934)
Q Consensus 776 ~~L~~DP~~RPT---a~evL~HPff~~~~~ 802 (934)
+||+.||++||| +.++|+||||...++
T Consensus 245 ~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 245 KLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred HHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 999999999998 567799999977665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=308.80 Aligned_cols=257 Identities=24% Similarity=0.303 Sum_probs=184.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-----------------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-----------------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVR 531 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-----------------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~ 531 (934)
++|.+.+.||+|+||+||++... ++..||+|++..... ....+|+. +++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK-IMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCcce
Confidence 45888899999999999986322 244799999865432 23456665 778889999999
Q ss_pred EEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHH
Q 002343 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611 (934)
Q Consensus 532 l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 611 (934)
+++++.+++..|++||+|. +|+|.+++........ ........+++.++..+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~----------~~~L~~~l~~~~~~~~------------------~~~~~~~~~~~~~~~~~ 135 (296)
T cd05095 84 LLAVCITSDPLCMITEYME----------NGDLNQFLSRHEPQEA------------------AEKADVVTISYSTLIFM 135 (296)
T ss_pred EEEEEecCCccEEEEEeCC----------CCcHHHHHHhcCcccc------------------cccccccccCHHHHHHH
Confidence 9999999999999999654 3444444432111000 00011234678889999
Q ss_pred HHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 612 ~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
+.||+.||+|||++||+||||||+|||++.++ .++|+|||+++.+.........
T Consensus 136 ~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~~------------------------ 189 (296)
T cd05095 136 ATQIASGMKYLSSLNFVHRDLATRNCLVGKNY--TIKIADFGMSRNLYSGDYYRIQ------------------------ 189 (296)
T ss_pred HHHHHHHHHHHHHCCeecccCChheEEEcCCC--CEEeccCcccccccCCcceecc------------------------
Confidence 99999999999999999999999999997655 4899999999876433211000
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcC-CCCCCCCchh-HHHHHH----hh----cccc
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG-GKHPYGESFE-RDANIV----KD----RKDL 761 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltG-g~~Pf~~~~~-~~~~i~----~~----~~~~ 761 (934)
....++..|+|||+..++.++.++|||||||++|||+++ +..||..... ...... .. ....
T Consensus 190 ---------~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (296)
T cd05095 190 ---------GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLP 260 (296)
T ss_pred ---------CcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCC
Confidence 012356789999999888999999999999999999984 4677754322 111111 00 0111
Q ss_pred cccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 762 FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 762 ~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.+...++.+.+|+.+||+.||++||++.+|++
T Consensus 261 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 261 KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 12334578999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=299.54 Aligned_cols=243 Identities=26% Similarity=0.389 Sum_probs=186.5
Q ss_pred EeeeecccCcEEEEEEEEec-----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 477 FNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~-----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.+.||.|+||.||++.... +..||+|.+..... .....|+. ++..++||||+++++++.+.+..|++||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREAR-IMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHH-HHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 46789999999999985543 48899999975543 23445555 6677799999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|. +++|.+++.... ...+++.++..++.|++.||+|||+.+|
T Consensus 82 ~~~----------~~~l~~~~~~~~---------------------------~~~~~~~~~~~~~~ql~~~l~~lh~~~~ 124 (258)
T smart00219 82 YME----------GGDLLDYLRKNR---------------------------PKELSLSDLLSFALQIARGMEYLESKNF 124 (258)
T ss_pred ccC----------CCCHHHHHHhhh---------------------------hccCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 664 344444443210 1116788999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+||+++.++ .++|+|||+++........... ...+++
T Consensus 125 ~h~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~----------------------------------~~~~~~ 168 (258)
T smart00219 125 IHRDLAARNCLVGENL--VVKISDFGLSRDLYDDDYYKKK----------------------------------GGKLPI 168 (258)
T ss_pred eecccccceEEEccCC--eEEEcccCCceecccccccccc----------------------------------cCCCcc
Confidence 9999999999997665 5999999999876544221110 023678
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||.+.+..++.++|||||||++|+|++++.+||...... ....+ .......+...+.++.+++.+||..||++|
T Consensus 169 ~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 248 (258)
T smart00219 169 RWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDR 248 (258)
T ss_pred cccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhC
Confidence 9999999988889999999999999999999778888653322 22222 222222334457899999999999999999
Q ss_pred cCHHHHHc
Q 002343 786 PKAQNVLN 793 (934)
Q Consensus 786 PTa~evL~ 793 (934)
||+.++++
T Consensus 249 pt~~~ll~ 256 (258)
T smart00219 249 PTFSELVE 256 (258)
T ss_pred cCHHHHHh
Confidence 99999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=303.51 Aligned_cols=242 Identities=23% Similarity=0.343 Sum_probs=173.5
Q ss_pred eecccCcEEEEEEEEecC---cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 480 EIAKGSNGTVVLEGNYEG---RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~~g---~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
+||+|+||+||++...++ ..+++|.+..... +...+|+ .+++.++||||+++++.+.+....|+|||||.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~-~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-- 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQG-DPYRILQHPNILQCLGQCVEAIPYLLVFEYCE-- 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHH-HHHhccCCcchhheEEEecCCCccEEEEecCC--
Confidence 699999999999865544 3566777654322 2344554 37788899999999999999999999999554
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
+|+|.++++..... ....+...++.++.||+.||+|||+++|+||||
T Consensus 79 --------~~~L~~~l~~~~~~-------------------------~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di 125 (268)
T cd05086 79 --------LGDLKSYLSQEQWH-------------------------RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL 125 (268)
T ss_pred --------CCcHHHHHHhhhcc-------------------------cccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 45555555432100 122455678899999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
||+|||++.++ .+||+|||++......... .. ....+|+..|+||
T Consensus 126 kp~nil~~~~~--~~~l~Dfg~~~~~~~~~~~-~~--------------------------------~~~~~~~~~y~aP 170 (268)
T cd05086 126 ALRNCFLTSDL--TVKVGDYGIGPSRYKEDYI-ET--------------------------------EDDKCVPLRWLAP 170 (268)
T ss_pred ccceEEEcCCc--cEEecccccccccCcchhh-hc--------------------------------ccCCcCcccccCc
Confidence 99999996655 4999999998643221110 00 0114588999999
Q ss_pred hhccc-------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc-----cccccCCCHHHHHHHHHcc
Q 002343 713 EQLLQ-------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK-----DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 713 E~l~~-------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~-----~~~~~~~~~e~~dLI~~~L 778 (934)
|++.. ..++.++|||||||++|||++++.+||....... ..+..... +.......+.+.+++..||
T Consensus 171 E~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~ 250 (268)
T cd05086 171 ELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW 250 (268)
T ss_pred hhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh
Confidence 99853 2457899999999999999998888886543321 12222211 1112234678899999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
.+|++||++++|++
T Consensus 251 -~~P~~Rp~~~~i~~ 264 (268)
T cd05086 251 -LSPEKRATAEEVHR 264 (268)
T ss_pred -hCcccCCCHHHHHH
Confidence 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=299.99 Aligned_cols=242 Identities=24% Similarity=0.307 Sum_probs=181.6
Q ss_pred eeecccCcEEEEEEEEec--C--cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGNYE--G--RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~--g--~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.||+|++|+||++...+ + ..||||.+..... +...+|+. +++.++||||+++++.+.+ ...++|||+|.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAA-IMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHH-HHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999985533 3 3699999976544 23445555 7788999999999999988 89999999654
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++.... ...+++..+..++.|++.||+|||++||+||
T Consensus 79 ----------~~~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 121 (257)
T cd05040 79 ----------LGSLLDRLRKDA---------------------------LGHFLISTLCDYAVQIANGMRYLESKRFIHR 121 (257)
T ss_pred ----------CCcHHHHHHhcc---------------------------cccCcHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 444444443210 0245778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++.+.......... ....++..|+
T Consensus 122 di~p~nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~--------------------------------~~~~~~~~y~ 167 (257)
T cd05040 122 DLAARNILLASDD--KVKIGDFGLMRALPQNEDHYVME--------------------------------EHLKVPFAWC 167 (257)
T ss_pred ccCcccEEEecCC--EEEeccccccccccccccceecc--------------------------------cCCCCCceec
Confidence 9999999997765 59999999998775432211110 0134788999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHh-hccc-ccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVK-DRKD-LFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~-~~~~-~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
|||++.+..++.++|||||||++|+|++.|..||.... .+....+. .... ..+...+.++.+++.+||+.+|++||+
T Consensus 168 ~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 247 (257)
T cd05040 168 APESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPT 247 (257)
T ss_pred CHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC
Confidence 99999988999999999999999999985577875432 22222222 1111 122334678999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.++++
T Consensus 248 ~~~~~~ 253 (257)
T cd05040 248 FAALRE 253 (257)
T ss_pred HHHHHH
Confidence 999975
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=304.31 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=184.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||.||++...+ ...||||....... +...+|+. +++.++||||+++++++.+ +..|+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAY-IMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHH-HHHhCCCCchhceeEEEcC-CCcEE
Confidence 457788999999999999985443 34799998865432 23444554 7888899999999999876 45789
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|. +|+|.+++... ...+++..++.++.|++.||+|||+
T Consensus 84 v~e~~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~l~~~l~~lH~ 125 (270)
T cd05056 84 VMELAP----------LGELRSYLQVN----------------------------KYSLDLASLILYSYQLSTALAYLES 125 (270)
T ss_pred EEEcCC----------CCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999654 44454444321 1235778899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.|++||||||+|||++.++ .+||+|||+++.+........ +...
T Consensus 126 ~~~~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~~~~~~~----------------------------------~~~~ 169 (270)
T cd05056 126 KRFVHRDIAARNVLVSSPD--CVKLGDFGLSRYLEDESYYKA----------------------------------SKGK 169 (270)
T ss_pred CCeeccccChheEEEecCC--CeEEccCceeeecccccceec----------------------------------CCCC
Confidence 9999999999999997655 499999999987654321110 0123
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhh-cccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||.+....++.++|||||||++||+++.+.+||....... ...+.. .....+...++++.++|.+||..+|
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 249 (270)
T cd05056 170 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 249 (270)
T ss_pred ccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence 56789999999888899999999999999999974577886543322 222222 2223344567899999999999999
Q ss_pred CCCcCHHHHHcC
Q 002343 783 DLRPKAQNVLNH 794 (934)
Q Consensus 783 ~~RPTa~evL~H 794 (934)
.+|||+.+++.+
T Consensus 250 ~~Rpt~~~~~~~ 261 (270)
T cd05056 250 SKRPRFTELKAQ 261 (270)
T ss_pred hhCcCHHHHHHH
Confidence 999999998863
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=305.83 Aligned_cols=244 Identities=30% Similarity=0.482 Sum_probs=187.0
Q ss_pred EEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 476 VFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
...+.||+|++|.||++... +++.||+|.+.... .+....|+. +++.++||||+++++++.+.+..|+|||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREIS-LLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHH-HHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 45678999999999998654 58999999987542 123455655 777889999999999999999999999988
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.++|.+++... ...+++.+++.++.|++.||+|||++||+|
T Consensus 81 ~~~l~~~i~~~---------------------------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (282)
T cd07829 81 DMDLKKYLDKR---------------------------------------PGPLSPNLIKSIMYQLLRGLAYCHSHRILH 121 (282)
T ss_pred CcCHHHHHHhh---------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 77766655211 124577889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||+|+||+++.++ .+||+|||+++......... ....++..|
T Consensus 122 ~~l~~~ni~~~~~~--~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~~~~~~ 164 (282)
T cd07829 122 RDLKPQNILINRDG--VLKLADFGLARAFGIPLRTY-----------------------------------THEVVTLWY 164 (282)
T ss_pred CCCChheEEEcCCC--CEEEecCCcccccCCCcccc-----------------------------------CccccCcCc
Confidence 99999999997655 48999999998764322110 013467789
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhh--------------c---c----------
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKD--------------R---K---------- 759 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~--------------~---~---------- 759 (934)
+|||.+.+. .++.++|||||||++||+++| .+||...... .. .+... . .
T Consensus 165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (282)
T cd07829 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITG-KPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKD 243 (282)
T ss_pred CChHHhcCCcCCCccccHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccc
Confidence 999999776 789999999999999999997 7777543211 11 11000 0 0
Q ss_pred -cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 760 -DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 760 -~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
....+..+.++.++|.+||+.||++||++.++++||||
T Consensus 244 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 00011235689999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.24 Aligned_cols=247 Identities=26% Similarity=0.421 Sum_probs=192.1
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
|.+.+.||+|+||+||++. ..+++.+|+|.+..... ....+|+. +++.++||||+++++++.+....|+|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~v~e- 79 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIR-ILASVNHPNIISYKEAFLDGNKLCIVME- 79 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHH-HHHhCCCCCchhhhhhhccCCEEEEEeh-
Confidence 6678899999999999974 45788999999865321 23345554 7788899999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+.++++|.+++..... ....+++..+..++.|++.||+|||+.|++
T Consensus 80 ---------~~~~~~L~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~l~~al~~lh~~~i~ 125 (256)
T cd08530 80 ---------YAPFGDLSKAISKRKK-------------------------KRKLIPEQEIWRIFIQLLRGLQALHEQKIL 125 (256)
T ss_pred ---------hcCCCCHHHHHHHHHh-------------------------hcCCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 4555566555533110 124567888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||+++.++ .+||+|||+++........ ...|+..
T Consensus 126 h~~l~~~ni~~~~~~--~~kl~d~g~~~~~~~~~~~-------------------------------------~~~~~~~ 166 (256)
T cd08530 126 HRDLKSANILLVAND--LVKIGDLGISKVLKKNMAK-------------------------------------TQIGTPH 166 (256)
T ss_pred cCCCCcceEEEecCC--cEEEeeccchhhhccCCcc-------------------------------------cccCCcc
Confidence 999999999997655 4899999999876543110 1347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||.+.+..++.++|+||||+++|+|++| .+||....... . .+..............+++++|.+||+.+|++||
T Consensus 167 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (256)
T cd08530 167 YMAPEVWKGRPYSYKSDIWSLGCLLYEMATF-APPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRP 245 (256)
T ss_pred ccCHHHHCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCC
Confidence 9999999998899999999999999999996 67876543322 1 2222222222334567899999999999999999
Q ss_pred CHHHHHcCCCC
Q 002343 787 KAQNVLNHPFF 797 (934)
Q Consensus 787 Ta~evL~HPff 797 (934)
++.++++||++
T Consensus 246 ~~~~~l~~p~~ 256 (256)
T cd08530 246 NCDKILASPAV 256 (256)
T ss_pred CHHHHhcCCCC
Confidence 99999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=302.25 Aligned_cols=228 Identities=25% Similarity=0.284 Sum_probs=174.4
Q ss_pred cCcEEEEEE-EEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhHHhhcC
Q 002343 484 GSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSG 562 (934)
Q Consensus 484 GsfGtVy~~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~G 562 (934)
|.+|+||++ +..+++.||+|++.+... ..+|.. .+....||||+++++++.+.+..|+|||||. +|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~----------~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--YSRERL-TIIPHCVPNMVCLHKYIVSEDSVFLVLQHAE----------GG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--hhhHHH-HHHhcCCCceeehhhheecCCeEEEEEecCC----------CC
Confidence 899999998 446789999999975432 223333 3344569999999999999999999999554 45
Q ss_pred CHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecC
Q 002343 563 SFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642 (934)
Q Consensus 563 sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d 642 (934)
+|.+++.. ..++++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 71 ~L~~~l~~-----------------------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~ 121 (237)
T cd05576 71 KLWSHISK-----------------------------FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR 121 (237)
T ss_pred CHHHHHHH-----------------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC
Confidence 55544422 2346788899999999999999999999999999999999766
Q ss_pred CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcc
Q 002343 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR 722 (934)
Q Consensus 643 ~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ 722 (934)
+. ++++|||++..+..... ...++..|+|||.+.+..++.
T Consensus 122 ~~--~~l~df~~~~~~~~~~~--------------------------------------~~~~~~~y~aPE~~~~~~~~~ 161 (237)
T cd05576 122 GH--IQLTYFSRWSEVEDSCD--------------------------------------GEAVENMYCAPEVGGISEETE 161 (237)
T ss_pred CC--EEEecccchhccccccc--------------------------------------cCCcCccccCCcccCCCCCCc
Confidence 54 89999998865533110 024677899999998888999
Q ss_pred cccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH-----HHHHcCCCC
Q 002343 723 AIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA-----QNVLNHPFF 797 (934)
Q Consensus 723 ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa-----~evL~HPff 797 (934)
++||||+||++|||++| ..|+....... ........+...++++++||.+||+.||++||++ +++++||||
T Consensus 162 ~~DvwslG~il~el~~g-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 162 ACDWWSLGAILFELLTG-KTLVECHPSGI---NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred hhhHHHHHHHHHHHHHC-cchhhcCchhc---ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 99999999999999997 55544321110 0001111223456789999999999999999996 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=308.54 Aligned_cols=258 Identities=24% Similarity=0.310 Sum_probs=184.3
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-------------c--CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-------------E--GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWY 533 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-------------~--g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~ 533 (934)
++|.+.+.||+|+||.||++... + ...||||.+..... +...+|++ +++.++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~-~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIK-IMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHH-HHHhCCCCCcCeEE
Confidence 45788899999999999986432 1 23599999865432 23445665 78889999999999
Q ss_pred EEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 534 g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
+++...+..|+|||||. +++|.+++........ . . .......+++.+++.++.
T Consensus 84 ~~~~~~~~~~lv~e~~~----------~~~L~~~l~~~~~~~~-~--------------~--~~~~~~~~~~~~~~~i~~ 136 (295)
T cd05097 84 GVCVSDDPLCMITEYME----------NGDLNQFLSQREIEST-F--------------T--HANNIPSVSIANLLYMAV 136 (295)
T ss_pred EEEcCCCccEEEEecCC----------CCcHHHHHHhcccccc-c--------------c--ccccCCcccHHHHHHHHH
Confidence 99999999999999655 4444444432110000 0 0 000012357788999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
|++.||+|||+++|+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 137 ~i~~al~~lH~~~i~H~dlkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~~~-------------------------- 188 (295)
T cd05097 137 QIASGMKYLASLNFVHRDLATRNCLVGNHY--TIKIADFGMSRNLYSGDYYRIQ-------------------------- 188 (295)
T ss_pred HHHHHHHHHHhcCeeccccChhhEEEcCCC--cEEecccccccccccCcceecc--------------------------
Confidence 999999999999999999999999997654 4999999999865432211000
Q ss_pred ccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcC-CCCCCCCchhHH-HH-HHh---h--c--ccccc
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG-GKHPYGESFERD-AN-IVK---D--R--KDLFL 763 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltG-g~~Pf~~~~~~~-~~-i~~---~--~--~~~~~ 763 (934)
....++..|+|||++.++.++.++|||||||++|+|+++ +..||....... .. ... . . .....
T Consensus 189 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (295)
T cd05097 189 -------GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQT 261 (295)
T ss_pred -------CcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCC
Confidence 012457789999999988999999999999999999984 456776532221 11 111 0 0 01112
Q ss_pred cCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 764 VEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 764 ~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
...++.+.+||.+||+.||++||++++|++
T Consensus 262 ~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 262 PLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 234678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=303.92 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=185.2
Q ss_pred eEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC--------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~--------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+|.+.+.||+|+||+||++... .+..+++|.+.... ...+.+|+. +++.++||||+++++++.+....|+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQ-LLSKLDHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHH-HHHhCCCCcHHHHHHHHhcCCceEE
Confidence 3677889999999999997543 34556666554211 112345554 7788999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ ++|.+++.... .....+++.+++.++.|++.||+|||+
T Consensus 80 v~e~~~~----------~~l~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (260)
T cd08222 80 ITEYCEG----------RDLDCKLEELK-------------------------HTGKTLSENQVCEWFIQLLLGVHYMHQ 124 (260)
T ss_pred EEEeCCC----------CCHHHHHHHHh-------------------------hcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 9996653 34443332110 012456888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+|+||||+||+++.+ .+||+|||+++.+....... ....
T Consensus 125 ~~i~h~~l~~~nili~~~---~~~l~d~g~~~~~~~~~~~~-----------------------------------~~~~ 166 (260)
T cd08222 125 RRILHRDLKAKNIFLKNN---LLKIGDFGVSRLLMGSCDLA-----------------------------------TTFT 166 (260)
T ss_pred cCccccCCChhheEeecC---CEeecccCceeecCCCcccc-----------------------------------cCCC
Confidence 999999999999999642 38999999997764322110 0134
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
|++.|+|||.+.+..++.++|+||||+++|+|++| .+||..... .. ..+........+...+.++.++|.+||..||
T Consensus 167 ~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 245 (260)
T cd08222 167 GTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCL-AHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDP 245 (260)
T ss_pred CCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCCh
Confidence 78899999999888889999999999999999996 566654322 11 1222222222333456799999999999999
Q ss_pred CCCcCHHHHHcCCCC
Q 002343 783 DLRPKAQNVLNHPFF 797 (934)
Q Consensus 783 ~~RPTa~evL~HPff 797 (934)
++||++.++++||||
T Consensus 246 ~~Rp~~~~il~~~~~ 260 (260)
T cd08222 246 SLRPSAAEILRNPFI 260 (260)
T ss_pred hhCcCHHHHhhCCCC
Confidence 999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=299.39 Aligned_cols=238 Identities=31% Similarity=0.434 Sum_probs=186.0
Q ss_pred ecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc-CC
Q 002343 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (934)
Q Consensus 481 IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~-~s 552 (934)
||.|+||.||.+.. .+++.||+|++.+... +....|+. +++.++||||+++++.+.+++..|+|||+|. ++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERN-ILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHH-HHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 69999999999854 3589999999875432 23445554 7888999999999999999999999999763 34
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
|.+++ .. ...+++.++..++.|++.||.|||+.+++|+||
T Consensus 80 L~~~l-----------~~-----------------------------~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l 119 (250)
T cd05123 80 LFSHL-----------SK-----------------------------EGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119 (250)
T ss_pred HHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 44433 21 224678889999999999999999999999999
Q ss_pred CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 633 KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 633 KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
||+||+++.++ .++|+|||++.......... ....|+..|+||
T Consensus 120 ~p~ni~~~~~~--~~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~P 162 (250)
T cd05123 120 KPENILLDADG--HIKLTDFGLAKELSSEGSRT-----------------------------------NTFCGTPEYLAP 162 (250)
T ss_pred CcceEEEcCCC--cEEEeecCcceecccCCCcc-----------------------------------cCCcCCccccCh
Confidence 99999997665 48999999998764432110 014578899999
Q ss_pred hhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH---
Q 002343 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA--- 788 (934)
Q Consensus 713 E~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa--- 788 (934)
|.+.+...+.++|+|||||++|++++| ..||..... .....+.......+...+.++.++|.+||..||++||++
T Consensus 163 e~~~~~~~~~~~D~~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~ 241 (250)
T cd05123 163 EVLLGKGYGKAVDWWSLGVLLYEMLTG-KPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGA 241 (250)
T ss_pred HHhCCCCCCchhhHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccH
Confidence 999888889999999999999999996 677754432 222222222222334446789999999999999999999
Q ss_pred HHHHcCCCC
Q 002343 789 QNVLNHPFF 797 (934)
Q Consensus 789 ~evL~HPff 797 (934)
+++++||||
T Consensus 242 ~~l~~~~~f 250 (250)
T cd05123 242 EEIKAHPFF 250 (250)
T ss_pred HHHHhCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=303.13 Aligned_cols=246 Identities=25% Similarity=0.298 Sum_probs=185.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCc----EEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGR----SVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~----~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..|.+.+.||+|+||+||++... +|+ .||+|.+..... ....+|+. +++.++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAY-VMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEec-CceE
Confidence 45778899999999999998543 333 699998875543 23345555 7788899999999999987 7899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||+|. +|+|.+++... ...+++..++.++.||+.||+|||
T Consensus 85 ~v~e~~~----------~g~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T cd05057 85 LITQLMP----------LGCLLDYVRNH----------------------------KDNIGSQYLLNWCVQIAKGMSYLE 126 (279)
T ss_pred EEEecCC----------CCcHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 45555544321 223678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++|+||||||+|||++.++ .+||+|||+++.+.......... ..
T Consensus 127 ~~~i~H~di~p~nil~~~~~--~~kL~dfg~~~~~~~~~~~~~~~---------------------------------~~ 171 (279)
T cd05057 127 EKRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLDVDEKEYHAE---------------------------------GG 171 (279)
T ss_pred hCCEEecccCcceEEEcCCC--eEEECCCcccccccCcccceecC---------------------------------CC
Confidence 99999999999999997655 49999999998765432211100 02
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.++..|+|||.+....++.++|||||||++||+++.+.+||.... ......+... ....+...+.++.+++.+||..|
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 251 (279)
T cd05057 172 KVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMID 251 (279)
T ss_pred cccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 246789999999888899999999999999999984577776543 3333333222 22223345678999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||++.++++
T Consensus 252 p~~Rp~~~~l~~ 263 (279)
T cd05057 252 AESRPTFKELIN 263 (279)
T ss_pred hhhCCCHHHHHH
Confidence 999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=303.96 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=177.7
Q ss_pred eeecccCcEEEEEEEEec-Cc--EEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGNYE-GR--SVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~-g~--~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.||+|+||.||++...+ +. .+|+|.+..... +...+|+. ++..+ +||||+++++++...+..|+|||||.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE-VLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHH-HHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 368999999999986543 43 578998864322 23455666 44555 89999999999999999999999654
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++......... +. ..........+++.+++.++.|++.||+|||++||+||
T Consensus 80 ----------~~~L~~~i~~~~~~~~~---------~~----~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~ 136 (270)
T cd05047 80 ----------HGNLLDFLRKSRVLETD---------PA----FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 136 (270)
T ss_pred ----------CCcHHHHHHhccccccc---------cc----cccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 44444444322110000 00 00000012357888999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+++....... . .....+..|+
T Consensus 137 dikp~nili~~~~--~~kl~dfgl~~~~~~~~~----~--------------------------------~~~~~~~~y~ 178 (270)
T cd05047 137 DLAARNILVGENY--VAKIADFGLSRGQEVYVK----K--------------------------------TMGRLPVRWM 178 (270)
T ss_pred ccccceEEEcCCC--eEEECCCCCccccchhhh----c--------------------------------cCCCCccccC
Confidence 9999999996554 599999999863221000 0 0022466799
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|||++++.+||.... ......+... ....+...+.++.+|+.+||+.||.+|||+
T Consensus 179 apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 258 (270)
T cd05047 179 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF 258 (270)
T ss_pred ChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence 99999888899999999999999999985577775432 2222222221 112233456789999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.++++
T Consensus 259 ~~il~ 263 (270)
T cd05047 259 AQILV 263 (270)
T ss_pred HHHHH
Confidence 99975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=311.33 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=200.0
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHh-CCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIAS-DQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~-l~HpNIV~l~g~~~~~~~~yL 544 (934)
..|.+..+||+|+||+|.++. ..+.+.+|||++++.-. +-.+.|-. +++. .+-|.+++++.+|+.-+.+|+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKr-vLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKR-VLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhh-heecCCCCchHHHHHHHhhhhhheee
Confidence 457788999999999999984 45578899999876521 11223333 4443 467899999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||. +|+|--++++ -+.+.++.+..++.+|+-||-+||+
T Consensus 428 VMEyvn----------GGDLMyhiQQ-----------------------------~GkFKEp~AvFYAaEiaigLFFLh~ 468 (683)
T KOG0696|consen 428 VMEYVN----------GGDLMYHIQQ-----------------------------VGKFKEPVAVFYAAEIAIGLFFLHS 468 (683)
T ss_pred EEEEec----------CchhhhHHHH-----------------------------hcccCCchhhhhhHHHHHHhhhhhc
Confidence 999555 4444333322 2445677888999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||.||||.+|||++.+++ +||+|||+++.---+.. ...+.|
T Consensus 469 kgIiYRDLKLDNvmLd~eGH--iKi~DFGmcKEni~~~~-----------------------------------TTkTFC 511 (683)
T KOG0696|consen 469 KGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIFDGV-----------------------------------TTKTFC 511 (683)
T ss_pred CCeeeeeccccceEeccCCc--eEeeecccccccccCCc-----------------------------------ceeeec
Confidence 99999999999999977765 99999999985332211 112379
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|||.|+|||++...+|+.++|+||+||+||||+.| ++||... .+.....+......++...+.|+.+++...|.+.|.
T Consensus 512 GTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaG-QpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~ 590 (683)
T KOG0696|consen 512 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPG 590 (683)
T ss_pred CCCcccccceEEecccccchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999996 7777554 444555566666677888899999999999999999
Q ss_pred CCcCH-----HHHHcCCCCCCccch
Q 002343 784 LRPKA-----QNVLNHPFFWTADTR 803 (934)
Q Consensus 784 ~RPTa-----~evL~HPff~~~~~~ 803 (934)
+|..+ .+|-.||||+..++.
T Consensus 591 kRLGcg~~ge~di~~H~FFR~iDWe 615 (683)
T KOG0696|consen 591 KRLGCGPEGERDIREHPFFRRIDWE 615 (683)
T ss_pred cccCCCCccccchhhCcchhhccHH
Confidence 99654 579999999888774
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=302.23 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=184.1
Q ss_pred eeecccCcEEEEEEEEec-------CcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 479 KEIAKGSNGTVVLEGNYE-------GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~-------g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.||+|+||.||++...+ ++.||||.+.+.. .....+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAH-LMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHH-HHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 368999999999975432 3689999886543 223445555 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
++++|+|.+++....... .....+++.+++.++.||+.||+|||+.+|
T Consensus 80 ----------~~~~~~L~~~l~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 127 (269)
T cd05044 80 ----------LMEGGDLLSYLRDARVER----------------------FGPPLLTLKELLDICLDVAKGCVYLEQMHF 127 (269)
T ss_pred ----------ccCCCcHHHHHHHhhhcc----------------------cCCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 555566666654321100 012346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCC---CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 628 IHRDLKPQNVLISKDK---SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 628 VHRDLKP~NILl~~d~---~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||||||+|||++.++ ...++|+|||+++.+......... ....
T Consensus 128 ~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------------------------------~~~~ 174 (269)
T cd05044 128 IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKE---------------------------------GEGL 174 (269)
T ss_pred ccCCCChheEEEecCCCCCCcceEECCcccccccccccccccC---------------------------------cccC
Confidence 9999999999997654 236999999999866432211100 0123
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhh-cccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
++..|+|||++.++.++.++|||||||++|+|++.+..||....... ...+.. .........+.++.+||.+||+.+|
T Consensus 175 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 254 (269)
T cd05044 175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDP 254 (269)
T ss_pred CCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCc
Confidence 57789999999999999999999999999999985577876533222 222221 1222233456789999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
.+||+++++++
T Consensus 255 ~~Rp~~~~i~~ 265 (269)
T cd05044 255 SERPTFDRIQE 265 (269)
T ss_pred ccCCCHHHHHH
Confidence 99999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=302.50 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=183.5
Q ss_pred EEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-----
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD----- 540 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~----- 540 (934)
|.+.+.||+|+||+||++... +++.||||++..... +...+|++ +++.++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAA-CMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHH-HHhcCCCCCcceEEEEEccCCCCCcc
Confidence 345678999999999998542 468999999865422 23456665 788899999999999876532
Q ss_pred -eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 -~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..++++|++ .+|+|..++....... +...++...++.++.||+.||
T Consensus 80 ~~~~~~~~~~----------~~~~l~~~~~~~~~~~-----------------------~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 80 PIPMVILPFM----------KHGDLHTFLLMSRIGE-----------------------EPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred cceEEEEecC----------CCCcHHHHHHHhcccC-----------------------CCCCCCHHHHHHHHHHHHHHH
Confidence 347888844 4455544442110000 012357788999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.+. .+||+|||+++.+.........
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~--~~kl~dfg~~~~~~~~~~~~~~-------------------------------- 172 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENM--TVCVADFGLSKKIYSGDYYRQG-------------------------------- 172 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCC--CEEECcccccccccCCcceecC--------------------------------
Confidence 999999999999999999996554 4899999999876433211100
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
....+++.|++||.+.+..++.++|||||||++|+|++++.+||....... .. +............+.++.+++.+|
T Consensus 173 -~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 251 (273)
T cd05074 173 -CASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQC 251 (273)
T ss_pred -CCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 012356789999999988899999999999999999997788886543322 22 222222222344568999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.+|++||++.+++++
T Consensus 252 l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 252 WSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred cCCChhhCcCHHHHHHH
Confidence 99999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=307.00 Aligned_cols=247 Identities=24% Similarity=0.293 Sum_probs=183.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCc----EEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGR----SVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~----~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..|...+.||+|+||.||++.. .+|+ .||+|.+...... ...+|+. +++.++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL-IMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCcccEEEEEcCC-Cce
Confidence 3466778999999999999854 3444 5799988654432 2344554 77888999999999998764 467
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+++|++ ++|+|.+++... ...+++..++.++.||+.||+|||
T Consensus 85 ~v~e~~----------~~g~l~~~~~~~----------------------------~~~~~~~~~~~~~~qi~~~L~~LH 126 (303)
T cd05110 85 LVTQLM----------PHGCLLDYVHEH----------------------------KDNIGSQLLLNWCVQIAKGMMYLE 126 (303)
T ss_pred eeehhc----------CCCCHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHh
Confidence 899944 455555544321 123567788999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++|+||||||+|||++.++ .+||+|||+++.+......... ...
T Consensus 127 ~~~ivH~dikp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~---------------------------------~~~ 171 (303)
T cd05110 127 ERRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNA---------------------------------DGG 171 (303)
T ss_pred hcCeeccccccceeeecCCC--ceEEccccccccccCccccccc---------------------------------CCC
Confidence 99999999999999997655 4899999999876543221110 012
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccc-ccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKD-LFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~-~~~~~~~~e~~dLI~~~L~~D 781 (934)
.++..|+|||++.+..++.++|||||||++|||++.+..||.... ......+..... ..+...+..+.+++.+||..+
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~ 251 (303)
T cd05110 172 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMID 251 (303)
T ss_pred ccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 367789999999988999999999999999999985567775543 333333332222 122334678999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++||++.++++.
T Consensus 252 p~~Rp~~~~l~~~ 264 (303)
T cd05110 252 ADSRPKFKELAAE 264 (303)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999874
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=325.02 Aligned_cols=250 Identities=27% Similarity=0.387 Sum_probs=197.2
Q ss_pred ceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESD-----QDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-----~~~~yL 544 (934)
..|.+.++||+|.+|.||++ +..+|+.+|||++..... +....|...++...+|||++.+||++.- ++.+||
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 45777899999999999997 667899999998865543 3344444456677799999999999864 578999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||.+ +.-|++.-- +...+.|+.+..|++.++.||.|||
T Consensus 99 VMEfC~gGSVTDLVKn~--------------------------------------~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNT--------------------------------------KGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred EeeccCCccHHHHHhhh--------------------------------------cccchhhHHHHHHHHHHHHHHHHHh
Confidence 9999985 666766210 1234567889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
.+.++|||||-.|||++.++. |||+|||.+..+...... . .+.
T Consensus 141 ~nkviHRDikG~NiLLT~e~~--VKLvDFGvSaQldsT~gr---R--------------------------------nT~ 183 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDSTVGR---R--------------------------------NTF 183 (953)
T ss_pred hcceeeecccCceEEEeccCc--EEEeeeeeeeeeeccccc---c--------------------------------cCc
Confidence 999999999999999988775 999999999887653221 1 126
Q ss_pred CCCCccccchhcccC-----CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhc-cccc---ccCCCHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQG-----RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR-KDLF---LVEHIPEAVDLF 774 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~-----~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~-~~~~---~~~~~~e~~dLI 774 (934)
+|||.|||||++... .|+..+|+||||++..||.-| .||+.+.....+-+...+ ++.- +...+.++.|+|
T Consensus 184 iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG-~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFI 262 (953)
T KOG0587|consen 184 IGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEG-APPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFI 262 (953)
T ss_pred CCCcccccceeeecccCCCCCcccccchhhccceeehhcCC-CCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHH
Confidence 799999999999753 468899999999999999995 888877654433322222 2211 233467899999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCC
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
..||.+|-.+||+..++|+|||+.
T Consensus 263 s~cL~Kd~e~RP~~~~ll~hpFi~ 286 (953)
T KOG0587|consen 263 STCLVKDYEQRPSTEELLKHPFIT 286 (953)
T ss_pred HHHHhhccccCcchhhhccCCccc
Confidence 999999999999999999999997
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=308.84 Aligned_cols=238 Identities=26% Similarity=0.363 Sum_probs=176.2
Q ss_pred EeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHH--HHHHHHHHhCCCCceeEEEEEEecCC----eEEEEEeccc
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVAL--KEIQNLIASDQHPNIVRWYGVESDQD----FVYLSLERCT 550 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~--~Ei~~ll~~l~HpNIV~l~g~~~~~~----~~yLVmE~c~ 550 (934)
+.++||+|.||.||+| ..+++.||||++...+.+... ++|-.+ -.+.|+||+++++..+... .++||+|
T Consensus 214 l~eli~~Grfg~V~Ka-qL~~~~VAVKifp~~~kqs~~~Ek~Iy~l-p~m~h~nIl~Fi~~ekr~t~~~~eywLVt~--- 288 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKA-QLDNRLVAVKIFPEQEKQSFQNEKNIYSL-PGMKHENILQFIGAEKRGTADRMEYWLVTE--- 288 (534)
T ss_pred hHHHhhcCccceeehh-hccCceeEEEecCHHHHHHHHhHHHHHhc-cCccchhHHHhhchhccCCccccceeEEee---
Confidence 3568999999999995 455699999999765554433 333322 2678999999999988766 8999999
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-----
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI----- 625 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~----- 625 (934)
|.++|+|.+||.. +.+++....+|+..+++||+|||+.
T Consensus 289 -------fh~kGsL~dyL~~------------------------------ntisw~~~cria~SmarGLa~LHee~p~~d 331 (534)
T KOG3653|consen 289 -------FHPKGSLCDYLKA------------------------------NTISWNSLCRIAESMARGLAHLHEELPRGD 331 (534)
T ss_pred -------eccCCcHHHHHHh------------------------------ccccHHHHHHHHHHHHHHHHHhcccCCcCC
Confidence 8888999888853 4467888999999999999999963
Q ss_pred ----CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 626 ----GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 626 ----gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
.|+|||||.+||||..|.+ +.|+|||||..+..+.......
T Consensus 332 ~~Kp~IaHRDlkSkNVLvK~DlT--ccIaDFGLAl~~~p~~~~~d~~--------------------------------- 376 (534)
T KOG3653|consen 332 HHKPPIAHRDLKSKNVLVKNDLT--CCIADFGLALRLEPGKPQGDTH--------------------------------- 376 (534)
T ss_pred CCCCccccccccccceEEccCCc--EEeeccceeEEecCCCCCcchh---------------------------------
Confidence 5999999999999977654 8999999999988654322110
Q ss_pred cCCCCCccccchhcccCC------CcccccccchhhhhHHhhcCCC-------CCCCCchh----------HHH-HHHhh
Q 002343 702 VGYGSSGWQAPEQLLQGR------QTRAIDLFSLGCILFFCITGGK-------HPYGESFE----------RDA-NIVKD 757 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~------~t~ksDIWSLGvILyeLltGg~-------~Pf~~~~~----------~~~-~i~~~ 757 (934)
..+||.+|||||++.+.. .-.+.||||+|.|||||++... ++|.-.++ +.. ..+..
T Consensus 377 ~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~k 456 (534)
T KOG3653|consen 377 GQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRK 456 (534)
T ss_pred hhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhh
Confidence 157999999999997632 2257999999999999998521 22221111 111 22222
Q ss_pred -cccccccC-----CCHHHHHHHHHcccCCCCCCcCHHHH
Q 002343 758 -RKDLFLVE-----HIPEAVDLFTRLLDPNPDLRPKAQNV 791 (934)
Q Consensus 758 -~~~~~~~~-----~~~e~~dLI~~~L~~DP~~RPTa~ev 791 (934)
..+.++.. ...-+++.+..||..||+.|.||.-+
T Consensus 457 K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 457 KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 22222211 12467899999999999999998765
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=300.90 Aligned_cols=246 Identities=27% Similarity=0.362 Sum_probs=181.7
Q ss_pred eEEEeeeecccCcEEEEEEEE-----ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-----~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~ 542 (934)
.|.+.+.||+|+||+||++.. .+++.||||.+..... +...+|+. +++.+.||||+++++++.. ..+.
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~-~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIE-ILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHH-HHHhCCCCChheEEeeeecCCCCce
Confidence 455678999999999999853 2478999999975543 23455655 7788899999999999887 6689
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|++||+|. +|+|.+++... ...+++..+..++.|++.||+||
T Consensus 84 ~lv~e~~~----------~~~l~~~l~~~----------------------------~~~~~~~~~~~~~~~l~~aL~~l 125 (284)
T cd05038 84 RLIMEYLP----------SGSLRDYLQRH----------------------------RDQINLKRLLLFSSQICKGMDYL 125 (284)
T ss_pred EEEEecCC----------CCCHHHHHHhC----------------------------ccccCHHHHHHHHHHHHHHHHHH
Confidence 99999664 34444444321 12357788899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .++|+|||++.............. .
T Consensus 126 H~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~--------------------------------~ 171 (284)
T cd05038 126 GSQRYIHRDLAARNILVESED--LVKISDFGLAKVLPEDKDYYYVKE--------------------------------P 171 (284)
T ss_pred HhCCeecCCCCHHhEEEcCCC--CEEEcccccccccccCCcceeccC--------------------------------C
Confidence 999999999999999997664 599999999987763322111000 0
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH----------------HHHHHhhccc-ccccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER----------------DANIVKDRKD-LFLVE 765 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~----------------~~~i~~~~~~-~~~~~ 765 (934)
..++..|+|||.+.+..++.++|||||||++|||++|.. |+...... ....+..... ..+..
T Consensus 172 ~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (284)
T cd05038 172 GESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD-PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPS 250 (284)
T ss_pred CCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC-CcccccchhccccccccccccHHHHHHHHHcCCcCCCCcc
Confidence 235567999999998899999999999999999999754 44322111 1112221111 11223
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
...++.+|+.+||+.+|++|||+.++++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 251 CPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 4578999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=316.45 Aligned_cols=283 Identities=25% Similarity=0.359 Sum_probs=205.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEec-CcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..|+.++.||-|+||+|.++...+ ...+|+|.+.+... -...+.+..+|+..+.+-||+||-.|+|.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 468888999999999999986554 56899999876532 123455566889999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
| |+++|++-..|-+ .+-++++.++.++.++.+|+++.|..|
T Consensus 709 d----------YIPGGDmMSLLIr-----------------------------mgIFeE~LARFYIAEltcAiesVHkmG 749 (1034)
T KOG0608|consen 709 D----------YIPGGDMMSLLIR-----------------------------MGIFEEDLARFYIAELTCAIESVHKMG 749 (1034)
T ss_pred e----------ccCCccHHHHHHH-----------------------------hccCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9 7777777665532 344677788899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCC------CCcchhhHHHHHHHhhhhhhcccc------c
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA------TGMDLQLVYLVSILLKLVICECVF------Q 694 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~ 694 (934)
+|||||||+||||+.||+ +||.|||||.-+.-.....-... ..+.....|. ....|.-+. .
T Consensus 750 FIHRDiKPDNILIDrdGH--IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~-----d~~~~lkvL~~ra~~~ 822 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWA-----DISKCLKVLERRAMRQ 822 (1034)
T ss_pred ceecccCccceEEccCCc--eeeeeccccccceeccccccccCCCccccccCCCchhhc-----cccccchHHHHHHHhh
Confidence 999999999999988876 99999999986653322111110 0111100000 000000000 0
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc--hhHHHHHHhhccccc---ccCCCHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES--FERDANIVKDRKDLF---LVEHIPE 769 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~--~~~~~~i~~~~~~~~---~~~~~~e 769 (934)
.........+||+.|+|||++....|+..||+||.|||||||+.| ++||... .+.+..++.|...+. ..+.++|
T Consensus 823 h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g-~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e 901 (1034)
T KOG0608|consen 823 HQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG-QPPFLADTPGETQYKVINWRNFLHIPYQGNLSKE 901 (1034)
T ss_pred hhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC-CCCccCCCCCcceeeeeehhhccccccccccCHH
Confidence 111122336899999999999999999999999999999999996 7777543 233445555655443 3456789
Q ss_pred HHHHHHHcccCCCCCCc---CHHHHHcCCCCCCccch
Q 002343 770 AVDLFTRLLDPNPDLRP---KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~RP---Ta~evL~HPff~~~~~~ 803 (934)
+.+||.++++ +++.|. .+++|..||||+..+..
T Consensus 902 ~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgIDfs 937 (1034)
T KOG0608|consen 902 ALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGIDFS 937 (1034)
T ss_pred HHHHHHHHhc-ChhhhhcccchhhhhcCccccccchH
Confidence 9999998765 688886 47889999999887653
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=337.12 Aligned_cols=144 Identities=31% Similarity=0.410 Sum_probs=115.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++... +++.||||++.+... ....+|+ .++..++||||+++++++...+++|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~-~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAER-DALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHH-HHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 45788899999999999998554 689999999875421 2233444 477888999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++..++.|+.||+.||+|||++
T Consensus 83 mEy~~----------g~~L~~li~~-----------------------------~~~l~~~~~~~i~~qil~aL~yLH~~ 123 (669)
T cd05610 83 MEYLI----------GGDVKSLLHI-----------------------------YGYFDEEMAVKYISEVALALDYLHRH 123 (669)
T ss_pred EeCCC----------CCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99654 3444444321 12356778899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccc
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l 658 (934)
+||||||||+||||+.++ .+||+|||+++..
T Consensus 124 gIiHrDLKP~NILl~~~g--~vkL~DFGls~~~ 154 (669)
T cd05610 124 GIIHRDLKPDNMLISNEG--HIKLTDFGLSKVT 154 (669)
T ss_pred CEEeCCccHHHEEEcCCC--CEEEEeCCCCccc
Confidence 999999999999997665 4999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=297.34 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=183.5
Q ss_pred EEEeeeecccCcEEEEEEEEec--CcEEEEEEeecCC---------h----hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYE--GRSVAVKRLVKTH---------H----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~--g~~VAVK~l~~~~---------~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
|.+.+.||+|+||+||++.... ++.||||.+.... . .....|+..+.+..+||||+++++++.++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5567889999999999986544 7899999875321 1 12345665455668999999999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+..|++|||+.+ ++|.+++.... .....+++..++.++.|++.||
T Consensus 82 ~~~~lv~e~~~~----------~~l~~~l~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~l 126 (269)
T cd08528 82 DRLYIVMDLIEG----------APLGEHFNSLK-------------------------EKKQRFTEERIWNIFVQMVLAL 126 (269)
T ss_pred CeEEEEEecCCC----------CcHHHHHHHHH-------------------------hccCCCCHHHHHHHHHHHHHHH
Confidence 999999996653 34433332100 0123467888999999999999
Q ss_pred HHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 620 SHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 620 ~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
.|||+ .+|+||||||+|||++.++ .+||+|||++........ .
T Consensus 127 ~~lh~~~~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~-~--------------------------------- 170 (269)
T cd08528 127 RYLHKEKRIVHRDLTPNNIMLGEDD--KVTITDFGLAKQKQPESK-L--------------------------------- 170 (269)
T ss_pred HHhccCCceeecCCCHHHEEECCCC--cEEEecccceeecccccc-c---------------------------------
Confidence 99996 7899999999999997665 489999999986543220 0
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccc-cccCCCHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDL-FLVEHIPEAVDLFT 775 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~-~~~~~~~e~~dLI~ 775 (934)
+...|+..|+|||++.+..++.++|||||||++|+|++| .+||..... .....+... ... .....++++.++|.
T Consensus 171 --~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 247 (269)
T cd08528 171 --TSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL-QPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVIT 247 (269)
T ss_pred --ccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC-CCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHH
Confidence 114588999999999988899999999999999999997 667754332 222222211 111 11234689999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||++||++.|+..+
T Consensus 248 ~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 248 SCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHCCCCCccCCCHHHHHHH
Confidence 9999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=315.20 Aligned_cols=271 Identities=21% Similarity=0.275 Sum_probs=177.9
Q ss_pred cceEEEeeeecccCcEEEEEEEE-----------------ecCcEEEEEEeecCCh---hH--------------HHHHH
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-----------------YEGRSVAVKRLVKTHH---DV--------------ALKEI 517 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-----------------~~g~~VAVK~l~~~~~---~~--------------~~~Ei 517 (934)
.+.|.+.++||+|+||+||++.. ..++.||||++..... +. ...|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45688899999999999998732 3457899999864321 11 12233
Q ss_pred HHHHHhCCCCc-----eeEEEEEEec--------CCeEEEEEecccC-ChhhhHHhhcC----CHHHHHhhhhccchhHH
Q 002343 518 QNLIASDQHPN-----IVRWYGVESD--------QDFVYLSLERCTC-SLNDLIYVLSG----SFEEQLNAKEQDSNLLN 579 (934)
Q Consensus 518 ~~ll~~l~HpN-----IV~l~g~~~~--------~~~~yLVmE~c~~-sL~dli~~~~G----sL~~~L~~~~~~~~~~~ 579 (934)
. ++..++|.| +++++++|.. .+..||||||+.+ +|.+++....+ .+.+++....
T Consensus 224 ~-~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~------- 295 (507)
T PLN03224 224 Y-MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGK------- 295 (507)
T ss_pred H-HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCC-------
Confidence 3 344455544 4677777653 3568999996653 55555443222 2222221100
Q ss_pred HHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
..........+++..++.++.|++.||+|||+++|+||||||+|||++.++ .+||+|||+++.+.
T Consensus 296 -------------~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~ 360 (507)
T PLN03224 296 -------------KIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMC 360 (507)
T ss_pred -------------chhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccc
Confidence 000111234467788999999999999999999999999999999997665 49999999997654
Q ss_pred CCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCC--------------------
Q 002343 660 GDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR-------------------- 719 (934)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~-------------------- 719 (934)
....... ....+|+.|+|||++....
T Consensus 361 ~~~~~~~----------------------------------~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~ 406 (507)
T PLN03224 361 TGINFNP----------------------------------LYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWL 406 (507)
T ss_pred cCCccCc----------------------------------cccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHh
Confidence 3211100 0134689999999986432
Q ss_pred C--cccccccchhhhhHHhhcCCCCCCCCch--hHHH----HH------Hhhcccc--cccCCCHHHHHHHHHcccCCC-
Q 002343 720 Q--TRAIDLFSLGCILFFCITGGKHPYGESF--ERDA----NI------VKDRKDL--FLVEHIPEAVDLFTRLLDPNP- 782 (934)
Q Consensus 720 ~--t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~----~i------~~~~~~~--~~~~~~~e~~dLI~~~L~~DP- 782 (934)
| ..+.||||+||++|+|+++...|+.... .... +. ....... .....+++++||+.+||..+|
T Consensus 407 yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~ 486 (507)
T PLN03224 407 YGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQ 486 (507)
T ss_pred cCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCC
Confidence 1 2347999999999999998666765321 1110 00 0111111 123456789999999999866
Q ss_pred --CCCcCHHHHHcCCCCCC
Q 002343 783 --DLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 783 --~~RPTa~evL~HPff~~ 799 (934)
.+|+|++|+|+||||..
T Consensus 487 ~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 487 ANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred CcccCCCHHHHhCCCCcCC
Confidence 68999999999999953
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=310.09 Aligned_cols=243 Identities=24% Similarity=0.385 Sum_probs=186.3
Q ss_pred eEEEeeeecccCcEEEEEEEEe---cC--cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNY---EG--RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~---~g--~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.....+.||.|-||.||.+... .| -.||||..+.... +.++.|. .+|+..+|||||+++|+|.+ ...||
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa-~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEA-SIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHH-HHHHhCCCcchhheeeeeec-cceeE
Confidence 3455678999999999996322 23 3599998876432 3344554 48999999999999999976 57999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|. .|.|..||..+ ...++...+..++.||+.||+|||+
T Consensus 468 vmEL~~----------~GELr~yLq~n----------------------------k~sL~l~tL~ly~~Qi~talaYLeS 509 (974)
T KOG4257|consen 468 VMELAP----------LGELREYLQQN----------------------------KDSLPLRTLTLYCYQICTALAYLES 509 (974)
T ss_pred EEeccc----------chhHHHHHHhc----------------------------cccchHHHHHHHHHHHHHHHHHHHh
Confidence 999765 34455555432 2345667788999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
.++|||||..+|||+... -|+||+||||++.+..+...... . +.
T Consensus 510 krfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~~yYkaS-~---------------------------------~k 553 (974)
T KOG4257|consen 510 KRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDDAYYKAS-R---------------------------------GK 553 (974)
T ss_pred hchhhhhhhhhheeecCc--ceeeecccchhhhccccchhhcc-c---------------------------------cc
Confidence 999999999999999654 37999999999998776543221 1 12
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
=...|||||.+.-+++|.++|||-|||+|||++.-|..||......+ ..+-++.....++.+++.+..|+.+||..||
T Consensus 554 LPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP 633 (974)
T KOG4257|consen 554 LPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEP 633 (974)
T ss_pred cceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCc
Confidence 34579999999999999999999999999999998888876543322 2233333334456677889999999999999
Q ss_pred CCCcCHHHHH
Q 002343 783 DLRPKAQNVL 792 (934)
Q Consensus 783 ~~RPTa~evL 792 (934)
.+||++.++.
T Consensus 634 ~kRPrftei~ 643 (974)
T KOG4257|consen 634 SKRPRFTEIK 643 (974)
T ss_pred ccCCcHHHHH
Confidence 9999987763
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-33 Score=318.62 Aligned_cols=196 Identities=34% Similarity=0.575 Sum_probs=162.9
Q ss_pred EEEeeeecccCcEEEEEEE-EecCcEEEEEEeecC----ChhHHHHHHHHHHHhCCCCceeEEEEEEecCC------eEE
Q 002343 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------FVY 543 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~------~~y 543 (934)
+...+.||+|+||.||+++ ..+|+.||||.+.+. ..+...+||+ +++.++|||||+++++.++.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eie-ilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIE-ILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHH-HHHHcCchhhhhhcccCCccccCcccccce
Confidence 3445789999999999986 567999999998763 2367788997 888899999999999987654 578
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.| |+|...|++.+ +..|+|+.+++.++.+++.||.|||
T Consensus 94 lvmEyC~g----------GsL~~~L~~PE--------------------------N~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 94 LVMEYCSG----------GSLRKVLNSPE--------------------------NAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred EEEeecCC----------CcHHHHhcCcc--------------------------cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99998875 45555443221 2578999999999999999999999
Q ss_pred HCCCcccCCCCCeEEEe--cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 624 EIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~--~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
++|||||||||.||++- .++...-||+|||.||.++++... +
T Consensus 138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~------------------------------------~ 181 (732)
T KOG4250|consen 138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLF------------------------------------T 181 (732)
T ss_pred HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCee------------------------------------e
Confidence 99999999999999985 345566899999999998876532 2
Q ss_pred cCCCCCccccchhcc-cCCCcccccccchhhhhHHhhcCCCCCC
Q 002343 702 VGYGSSGWQAPEQLL-QGRQTRAIDLFSLGCILFFCITGGKHPY 744 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~-~~~~t~ksDIWSLGvILyeLltGg~~Pf 744 (934)
..+||+.|.|||++. ++.|+..+|.|||||++|+++|| ..||
T Consensus 182 S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG-~lPF 224 (732)
T KOG4250|consen 182 SLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATG-ELPF 224 (732)
T ss_pred eecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhcc-CCCC
Confidence 378999999999998 47889999999999999999997 5555
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=291.04 Aligned_cols=132 Identities=29% Similarity=0.391 Sum_probs=108.0
Q ss_pred cceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCC----C---CceeEEEEEEec---
Q 002343 472 GKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQ----H---PNIVRWYGVESD--- 538 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~----H---pNIV~l~g~~~~--- 538 (934)
+.+|.+.++||-|.|+|||++ +....+.||+|+.+..+. +.++.||..|...-. | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 378899999999999999998 667789999999875543 678889884433221 3 469999999875
Q ss_pred -CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 -QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 -~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+.++|||+|+.+.+|..+|.. ...+|+|...+++|++||+.
T Consensus 157 NG~HVCMVfEvLGdnLLklI~~--------------------------------------s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 157 NGQHVCMVFEVLGDNLLKLIKY--------------------------------------SNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred CCcEEEEEehhhhhHHHHHHHH--------------------------------------hCCCCCcHHHHHHHHHHHHH
Confidence 558999999888877776632 12578999999999999999
Q ss_pred HHHHHHH-CCCcccCCCCCeEEEec
Q 002343 618 GLSHLHE-IGLIHRDLKPQNVLISK 641 (934)
Q Consensus 618 gL~yLHs-~gIVHRDLKP~NILl~~ 641 (934)
||.|||. .||||-||||+|||+..
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeeec
Confidence 9999996 58999999999999853
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=297.37 Aligned_cols=262 Identities=26% Similarity=0.377 Sum_probs=200.7
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEee--cCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLV--KTHH--------DVALKEIQNLIASDQHPNIVRWYGVES 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~--~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~ 537 (934)
..+.++|.+...||+|+|+.||++ +....+.||||+-. +... ..+.+|-. +.+.++||.||++|+++.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyr-IHKeLDHpRIVKlYDyfs 537 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYR-IHKELDHPRIVKLYDYFS 537 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHh-hhhccCcceeeeeeeeee
Confidence 456677888899999999999998 67789999999753 2211 23455554 788999999999999987
Q ss_pred -cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 538 -DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 538 -~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
|.+.+|-|+|||+|+-.|+. |.. ..-+++.+++.|+.||+
T Consensus 538 lDtdsFCTVLEYceGNDLDFY----------LKQ-----------------------------hklmSEKEARSIiMQiV 578 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFY----------LKQ-----------------------------HKLMSEKEARSIIMQIV 578 (775)
T ss_pred eccccceeeeeecCCCchhHH----------HHh-----------------------------hhhhhHHHHHHHHHHHH
Confidence 45679999999998644442 111 22346788999999999
Q ss_pred HHHHHHHHC--CCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 617 SGLSHLHEI--GLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 617 ~gL~yLHs~--gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
.||.||.+. .|||-||||.|||+.... ...+||.||||++.+..+......
T Consensus 579 nAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------------------------- 632 (775)
T KOG1151|consen 579 NALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------------------------- 632 (775)
T ss_pred HHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc--------------------------
Confidence 999999976 599999999999996432 235899999999998876543211
Q ss_pred ccccceeecCCCCCccccchhcccC----CCcccccccchhhhhHHhhcCCCCCCCCchhHHH-----HHHhhccccccc
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQG----RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----NIVKDRKDLFLV 764 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~----~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----~i~~~~~~~~~~ 764 (934)
|-.....+.||..|.+||.+.-+ +.+.++||||.|||+|.++.| +.||+....... .|++.....+++
T Consensus 633 --GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYG-rKPFGhnqsQQdILqeNTIlkAtEVqFP~ 709 (775)
T KOG1151|consen 633 --GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYG-RKPFGHNQSQQDILQENTILKATEVQFPP 709 (775)
T ss_pred --ceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhcc-CCCCCCchhHHHHHhhhchhcceeccCCC
Confidence 11122337899999999998644 358899999999999999996 678887654322 233333333332
Q ss_pred --CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 765 --EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 765 --~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
-.++++++||++||++.-++|....++..||+|..
T Consensus 710 KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 710 KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 35689999999999999999999999999999954
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-32 Score=287.53 Aligned_cols=247 Identities=29% Similarity=0.444 Sum_probs=189.7
Q ss_pred eecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
.+..+|.-.+.+|.|.- .|..+ +...+++||+|++.... ...+.+|.. ++..++|+||++++.++.-..
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~-l~~~v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELK-LMKCVNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhh-hhhhhcccceeeeeeccCccccHH
Confidence 45567888888999998 55554 56679999999886542 356788886 888999999999999987654
Q ss_pred ---eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 541 ---~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+|+|||++..+|.+.+.+. +.-..+..|+.|++.
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~e------------------------------------------lDH~tis~i~yq~~~ 129 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILME------------------------------------------LDHETISYILYQMLC 129 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHHh------------------------------------------cchHHHHHHHHHHHH
Confidence 58999999988888777532 123467899999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
|++|||+.||+||||||+||++..+. .+||.|||+|+.-..+.
T Consensus 130 ~ik~lhs~~IihRdLkPsnivv~~~~--~lKi~dfg~ar~e~~~~----------------------------------- 172 (369)
T KOG0665|consen 130 GIKHLHSAGIIHRDLKPSNIVVNSDC--TLKILDFGLARTEDTDF----------------------------------- 172 (369)
T ss_pred HHHHHHhcceeecccCcccceecchh--heeeccchhhcccCccc-----------------------------------
Confidence 99999999999999999999996654 59999999998654431
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-----------------------HH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----------------------NI 754 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----------------------~i 754 (934)
.+|..+.|..|.|||++.+..|...+||||+||++.||++|.-.+-|...-.+. +.
T Consensus 173 -~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 173 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred -ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 123367899999999999999999999999999999999985444333211110 11
Q ss_pred Hhhcc--------cccc-----------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 755 VKDRK--------DLFL-----------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 755 ~~~~~--------~~~~-----------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
....+ ..++ .-.+..++||+.+||..||++|.+++++|+||||+
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11100 0011 01134689999999999999999999999999995
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-32 Score=300.65 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=197.7
Q ss_pred EEEeeeecccCcEEEEEEEEec-CcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+...++||-|.||.||.+.+.. .-.||||.++.... +++++|.. +|+.+.|||+|+++|+|..+..+|||+|
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAA-vMKeikHpNLVqLLGVCT~EpPFYIiTE---- 343 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTHEPPFYIITE---- 343 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHH-HHHhhcCccHHHHhhhhccCCCeEEEEe----
Confidence 4456789999999999865443 56899999976654 45667765 8899999999999999999999999999
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
||.+|+|.+||++.. ..-++.-.++.++.||.+|++||..+++||||
T Consensus 344 ------fM~yGNLLdYLRecn---------------------------r~ev~avvLlyMAtQIsSaMeYLEkknFIHRD 390 (1157)
T KOG4278|consen 344 ------FMCYGNLLDYLRECN---------------------------RSEVPAVVLLYMATQISSAMEYLEKKNFIHRD 390 (1157)
T ss_pred ------cccCccHHHHHHHhc---------------------------hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 888888888887532 12234556789999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|..+|+|+..+ ..|||+||||++.+..+......... =...|.|
T Consensus 391 LAARNCLVgEn--hiVKvADFGLsRlMtgDTYTAHAGAK----------------------------------FPIKWTA 434 (1157)
T KOG4278|consen 391 LAARNCLVGEN--HIVKVADFGLSRLMTGDTYTAHAGAK----------------------------------FPIKWTA 434 (1157)
T ss_pred hhhhhcccccc--ceEEeeccchhhhhcCCceecccCcc----------------------------------CcccccC
Confidence 99999999654 35999999999998876543221110 1347999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccc-cccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDL-FLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~-~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
||.+....++.|+|||+|||+|||+.|-|..||.... .+...++...... .+..+++.+.+|+..||++.|.+||++.
T Consensus 435 PEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFa 514 (1157)
T KOG4278|consen 435 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFA 514 (1157)
T ss_pred cccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHH
Confidence 9999999999999999999999999999999997654 3344444444433 3456778999999999999999999998
Q ss_pred HHHc
Q 002343 790 NVLN 793 (934)
Q Consensus 790 evL~ 793 (934)
|+-+
T Consensus 515 eiHq 518 (1157)
T KOG4278|consen 515 EIHQ 518 (1157)
T ss_pred HHHH
Confidence 8743
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-32 Score=305.20 Aligned_cols=247 Identities=23% Similarity=0.305 Sum_probs=190.6
Q ss_pred EEEeeeecccCcEEEEEEEEe--cCc--EEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGNY--EGR--SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~--~g~--~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..+.++||+|+||.|+.+.+. .|+ .||||.+.... .+.+++|.. .|..++|||+|||||+..+ ....|||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas-~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREAS-HMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHH-HHHhccCcceeEEeeeecc-chhhHHh
Confidence 445678999999999986543 243 69999986543 356677776 7788999999999999988 7789999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|.+ |+|.+.|+.. ....+....+..++.|||.||.||.+++
T Consensus 190 ELapl----------GSLldrLrka---------------------------~~~~llv~~Lcdya~QiA~aM~YLeskr 232 (1039)
T KOG0199|consen 190 ELAPL----------GSLLDRLRKA---------------------------KKAILLVSRLCDYAMQIAKAMQYLESKR 232 (1039)
T ss_pred hhccc----------chHHHHHhhc---------------------------cccceeHHHHHHHHHHHHHHHHHHhhhh
Confidence 97764 4555554431 1233456678899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
+|||||..+|||+.... .+|||||||.+.+........-... ..-.
T Consensus 233 lvHRDLAARNlllaspr--tVKI~DFGLmRaLg~ned~Yvm~p~--------------------------------rkvP 278 (1039)
T KOG0199|consen 233 LVHRDLAARNLLLASPR--TVKICDFGLMRALGENEDMYVMAPQ--------------------------------RKVP 278 (1039)
T ss_pred hhhhhhhhhhheecccc--eeeeecccceeccCCCCcceEecCC--------------------------------CcCc
Confidence 99999999999996643 5999999999998876543321111 1124
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccc-cCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFL-VEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~-~~~~~e~~dLI~~~L~~DP~~ 784 (934)
..|+|||.+....++.++|||+|||++|||+|+|.-||-.. -......+.....+.. ..++.++.+++..||..+|++
T Consensus 279 fAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paD 358 (1039)
T KOG0199|consen 279 FAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPAD 358 (1039)
T ss_pred ccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccc
Confidence 57999999999999999999999999999999999998654 3333444444444443 345668899999999999999
Q ss_pred CcCHHHHHcC
Q 002343 785 RPKAQNVLNH 794 (934)
Q Consensus 785 RPTa~evL~H 794 (934)
|||+..|.+.
T Consensus 359 RptFsair~~ 368 (1039)
T KOG0199|consen 359 RPTFSAIRED 368 (1039)
T ss_pred cccHHHHHHh
Confidence 9999998654
|
|
| >PF06479 Ribonuc_2-5A: Ribonuclease 2-5A; InterPro: IPR010513 The proteins listed below share a common architecture with a protein kinase homology domain (see PDOC00100 from PROSITEDOC) followed by an ~135-residue globular kinase-extension nuclease (KEN) domain made of eight helices []: - Mammalian 2-5A-dependent RNase or RNase L (EC 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-33 Score=264.34 Aligned_cols=129 Identities=53% Similarity=0.986 Sum_probs=115.1
Q ss_pred chhhhhhhhcccchhccccchHHHHHHHHhhhhHhcCCcchhhhhHHHHhhhhhhccCCCCCHHHHHHHHHhccCCCccC
Q 002343 802 TRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFREL 881 (934)
Q Consensus 802 ~~~~fl~~~sd~~e~~~~~~~~~l~~~le~~~~~~~~~~w~~~~~~~~~~~l~~~r~y~~~~v~dllr~irnk~~h~~el 881 (934)
+++.|++++||++|.+.+...+.++.+||..+..+++++|.+++|+.++++|+++|+|++++|+||||+||||+|||+|+
T Consensus 1 krl~Fl~dvSDr~E~~~~~~~s~~l~~Le~~~~~v~~~~W~~~ld~~l~~~l~~~R~Y~~~sv~DLLR~IRNk~~Hy~el 80 (129)
T PF06479_consen 1 KRLSFLQDVSDRIEKESRDPPSPLLQELESNAEDVLGGDWDKKLDPELLDDLGKYRKYDGDSVRDLLRAIRNKKHHYQEL 80 (129)
T ss_dssp HHHHHHHHHHHHCSSS-TTTTSHHHHHHHHCCCCCTTS-CGGCSBHHHHHCCTTTSS--TT-HHHHHHHHHHHHHTCCCS
T ss_pred ChhHHHHHhhhHhhhcccccchHHHHHHHhcCCCCCCccHhHHhCHHHHHHHHhccCCCccCHHHHHHHHHcchHhHHHC
Confidence 47899999999999999988889999999988888899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCCCCccccccccccCCchHHHHHHHHHhhccCcccccccccc
Q 002343 882 PQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTN 931 (934)
Q Consensus 882 ~~~~~~~lg~~p~~~~~yf~~~fP~ll~~~y~~~~~~~~~~~~f~~y~~~ 931 (934)
|+++|+.+|++|+||++||++|||+||+|||++++ +|++|+.|.+||..
T Consensus 81 ~~~~k~~lg~~p~gf~~YF~~rFP~Ll~~~Y~~~~-~~~~e~~F~~y~~~ 129 (129)
T PF06479_consen 81 PEEVKEILGSLPDGFLNYFTSRFPNLLIHVYNFVR-NCKNEPHFKKYFNP 129 (129)
T ss_dssp -HHHHHHC-STTHHHHHHHHTT-TTHHHHHHHHHH-HCTTSCCCHHHH--
T ss_pred CHHHHHHhCCCchHHHHHHHHHCcHHHHHHHHHHH-hcCccHHHHhhccC
Confidence 99999999999999999999999999999999997 99999999999963
|
1.26.-), an interferon- induced enzyme implicated in both the molecular mechanisms of interferon action and the fundamental control of RNA stability. 2-5A-dependent RNase is a unique enzyme in that it requires 2-5A, unusual oligoadenylates with 2',5'-phosphodiester linkages. RNase L is catalytically active only after binding to an unusual activator molecule containing a 5'-phosphorylated 2', 5'-linked oligoadenylate (2-5A), in the N-terminal half. RNase L consists of three domains, namely the N-terminal ankyrin repeat domain (see PDOC50088 from PROSITEDOC), the protein kinase homology domain, and the C-terminal KEN domain [, , ]. - Eukaryotic Ire1/Ern1, an ancient transmembrane sensor of endoplasmic reticulum (ER) stress with dual protein kinase and ribonuclease activities. In response to ER stress Ire1/Ern1 catalyzes the splicing of target mRNAs in a spliceosome-independent manner. Ire1/Ern1 is a type 1 transmembrane receptor consisting of an N-terminal ER luminal domain, a transmembrane segment and a cytoplasmic region. The cytoplasmic region encompasses a protein kinase domain followed by a C-terminal KEN domain [, ]. The dimerisation of the kinase domain activates the ribonuclease function of the KEN domain [].; GO: 0016891 endoribonuclease activity, producing 5'-phosphomonoesters, 0006397 mRNA processing; PDB: 3SDJ_D 3FBV_L 3LJ2_A 3SDM_A 3LJ0_A 2RIO_A 3LJ1_A 3P23_A. |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=308.90 Aligned_cols=243 Identities=25% Similarity=0.320 Sum_probs=191.8
Q ss_pred EeeeecccCcEEEEEEEEe-cC----cEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 477 FNKEIAKGSNGTVVLEGNY-EG----RSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~-~g----~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..++||.|+||+||++... +| -+||||++...... ..+-|....|++++|||++|++|++.... +-||++
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq- 777 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ- 777 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH-
Confidence 3578999999999998653 23 47999998754432 23334445889999999999999998776 778888
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+++.|.|.++++.. +..+-...++.+..||++||.|||++++|
T Consensus 778 ---------~mP~G~LlDyvr~h----------------------------r~~igsq~lLnw~~QIAkgM~YLe~qrlV 820 (1177)
T KOG1025|consen 778 ---------LMPLGCLLDYVREH----------------------------RDNIGSQDLLNWCYQIAKGMKYLEEQRLV 820 (1177)
T ss_pred ---------hcccchHHHHHHHh----------------------------hccccHHHHHHHHHHHHHHHHHHHhcchh
Confidence 77778888777643 23345567899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||..+|||+..-. .+||.|||+|+.+..+........ +.-.+.
T Consensus 821 HrdLaaRNVLVksP~--hvkitdfgla~ll~~d~~ey~~~~---------------------------------gK~pik 865 (1177)
T KOG1025|consen 821 HRDLAARNVLVKSPN--HVKITDFGLAKLLAPDEKEYSAPG---------------------------------GKVPIK 865 (1177)
T ss_pred hhhhhhhheeecCCC--eEEEEecchhhccCcccccccccc---------------------------------cccCcH
Confidence 999999999997554 499999999999988765443222 122457
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccccc-ccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~-~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|||=|.+....||.++|||||||++||++|-|..||.... +.....++....+. ++-.+-++.-++.+||..|++.||
T Consensus 866 wmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp 945 (1177)
T KOG1025|consen 866 WMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRP 945 (1177)
T ss_pred HHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCc
Confidence 9999999999999999999999999999998888876644 44555555544444 334556899999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
+++++..
T Consensus 946 ~fkel~~ 952 (1177)
T KOG1025|consen 946 TFKELAE 952 (1177)
T ss_pred cHHHHHH
Confidence 9988753
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-32 Score=299.75 Aligned_cols=255 Identities=23% Similarity=0.328 Sum_probs=192.2
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC--hhHHHHHHHHHHHhCC------CCceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQ------HPNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~------HpNIV~l~g~~~~~ 539 (934)
+.+..+|.+....|+|-|++|+.| ....|..||||++.... +...++|++ +++.++ --|+++|+-.|...
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~Ele-iLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELE-ILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHH-HHHHhhccCchhhhHHHHHHHHhhhc
Confidence 445577999999999999999998 44568899999997654 245678887 445442 35799999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+++|||+|-+..+|.+++...+ +.-||....++.++.|+..||
T Consensus 507 nHLClVFE~LslNLRevLKKyG-------------------------------------~nvGL~ikaVRsYaqQLflAL 549 (752)
T KOG0670|consen 507 NHLCLVFEPLSLNLREVLKKYG-------------------------------------RNVGLHIKAVRSYAQQLFLAL 549 (752)
T ss_pred ceeEEEehhhhchHHHHHHHhC-------------------------------------cccceeehHHHHHHHHHHHHH
Confidence 9999999977777666653211 134566778999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
.+|-..||+|.||||+|||++.... .+||||||.|-........ .
T Consensus 550 klLK~c~vlHaDIKPDNiLVNE~k~-iLKLCDfGSA~~~~eneit------------P---------------------- 594 (752)
T KOG0670|consen 550 KLLKKCGVLHADIKPDNILVNESKN-ILKLCDFGSASFASENEIT------------P---------------------- 594 (752)
T ss_pred HHHHhcCeeecccCccceEeccCcc-eeeeccCcccccccccccc------------H----------------------
Confidence 9999999999999999999987655 6999999998766543211 1
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH---hh-------------------
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV---KD------------------- 757 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~---~~------------------- 757 (934)
..-+..|.|||++.+-.|+...|+||.||+||||.||.-.+-|.......... ++
T Consensus 595 ---YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~ 671 (752)
T KOG0670|consen 595 ---YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQ 671 (752)
T ss_pred ---HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhccc
Confidence 12356799999999999999999999999999999974444333222211100 00
Q ss_pred -----------------------ccc---c---------cccC---CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 758 -----------------------RKD---L---------FLVE---HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 758 -----------------------~~~---~---------~~~~---~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
..+ + .+.+ ...++++|+.+||..||++|.|..++|+||||..
T Consensus 672 d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 672 DLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred ccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 000 0 0000 0136789999999999999999999999999953
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-32 Score=301.27 Aligned_cols=248 Identities=26% Similarity=0.388 Sum_probs=194.1
Q ss_pred EeeeecccCcEEEEEEEEecCc-EEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~-~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
....||-|+||.|-+......+ .+|+|.+++.+. +....| .++|..++.|.||++|-.|.++.++|+.||-|
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sE-r~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaC 502 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSE-RNIMMECRSDFIVRLYRTFRDSKYVYMLMEAC 502 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhH-HHHHHhcCchHHHHHHHHhccchhhhhhHHhh
Confidence 3457999999999886544433 589998876543 223333 45777788999999999999999999999987
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
-| |.+-..|+. .+.+.+...+.++..++.|++|||++|||.
T Consensus 503 lG----------GElWTiLrd-----------------------------Rg~Fdd~tarF~~acv~EAfeYLH~k~iIY 543 (732)
T KOG0614|consen 503 LG----------GELWTILRD-----------------------------RGSFDDYTARFYVACVLEAFEYLHRKGIIY 543 (732)
T ss_pred cC----------chhhhhhhh-----------------------------cCCcccchhhhhHHHHHHHHHHHHhcCcee
Confidence 64 333333322 234455667889999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|.|++.+|- +||.|||+|+.+..+....+ +||||.|
T Consensus 544 RDLKPENllLd~~Gy--~KLVDFGFAKki~~g~KTwT------------------------------------FcGTpEY 585 (732)
T KOG0614|consen 544 RDLKPENLLLDNRGY--LKLVDFGFAKKIGSGRKTWT------------------------------------FCGTPEY 585 (732)
T ss_pred ccCChhheeeccCCc--eEEeehhhHHHhccCCceee------------------------------------ecCCccc
Confidence 999999999977664 89999999999877654322 7899999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHH-Hhhccc-ccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANI-VKDRKD-LFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i-~~~~~~-~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
.|||++.+...+.++|.||||+++|||++| .|||..... ...+. ++.... .++......+.+||+++...+|.+|.
T Consensus 586 VAPEIILnKGHD~avDyWaLGIli~ELL~G-~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL 664 (732)
T KOG0614|consen 586 VAPEIILNKGHDRAVDYWALGILIYELLTG-SPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL 664 (732)
T ss_pred ccchhhhccCcchhhHHHHHHHHHHHHHcC-CCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence 999999999999999999999999999996 778865433 33333 333222 23344557899999999999999997
Q ss_pred C-----HHHHHcCCCCCCccch
Q 002343 787 K-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 787 T-----a~evL~HPff~~~~~~ 803 (934)
. +.++-+|.||-+.++.
T Consensus 665 G~~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 665 GYQKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred ccccCChHHHHhhhhhhcCChh
Confidence 5 8899999999887764
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=279.42 Aligned_cols=256 Identities=22% Similarity=0.314 Sum_probs=198.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--h---HHHH-HHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--D---VALK-EIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~---~~~~-Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..|.+.++||+|+|++|.++.. .+.+.+|+|++++.-. + .+.. |-.-.-...+||.+|-++.+|+.+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 4577889999999999998754 5678999999876421 1 1222 222233456899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
.| |+++|+|--++. +...+|++.++.+...|+.||.|||++
T Consensus 330 ie----------yv~ggdlmfhmq-----------------------------rqrklpeeharfys~ei~lal~flh~r 370 (593)
T KOG0695|consen 330 IE----------YVNGGDLMFHMQ-----------------------------RQRKLPEEHARFYSAEICLALNFLHER 370 (593)
T ss_pred EE----------EecCcceeeehh-----------------------------hhhcCcHHHhhhhhHHHHHHHHHHhhc
Confidence 99 666666543332 246789999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||.||||.+|+|++.++. +||.|+|+++.--.+... ..+.||
T Consensus 371 giiyrdlkldnvlldaegh--ikltdygmcke~l~~gd~-----------------------------------tstfcg 413 (593)
T KOG0695|consen 371 GIIYRDLKLDNVLLDAEGH--IKLTDYGMCKEGLGPGDT-----------------------------------TSTFCG 413 (593)
T ss_pred CeeeeeccccceEEccCCc--eeecccchhhcCCCCCcc-----------------------------------cccccC
Confidence 9999999999999977765 999999999864332211 123799
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC--------ch-hHHHHHHhhcccccccCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE--------SF-ERDANIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~--------~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
||.|+|||++.+..|+..+|+|+|||+|+||+.| +.||.- +. +-..+++..+....+...+..+..+++.
T Consensus 414 tpnyiapeilrgeeygfsvdwwalgvlmfemmag-rspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkg 492 (593)
T KOG0695|consen 414 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG-RSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKG 492 (593)
T ss_pred CCcccchhhhcccccCceehHHHHHHHHHHHHcC-CCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHH
Confidence 9999999999999999999999999999999996 667641 11 1123444444444445556778899999
Q ss_pred cccCCCCCCc------CHHHHHcCCCCCCccchhh
Q 002343 777 LLDPNPDLRP------KAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 777 ~L~~DP~~RP------Ta~evL~HPff~~~~~~~~ 805 (934)
.|++||++|. ...++..||||+..++.+-
T Consensus 493 flnkdp~erlgc~~~~g~~dik~h~ffr~idwd~l 527 (593)
T KOG0695|consen 493 FLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLL 527 (593)
T ss_pred hhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHH
Confidence 9999999995 3688999999988887643
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=312.37 Aligned_cols=260 Identities=26% Similarity=0.376 Sum_probs=195.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
+...+.+.||+|.||.|+++... ....||||.++.... +....|+..+.....|||||.++|++..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 33455669999999999997432 145799999875543 345677776777778999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhh--CCCCHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA--NGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~i~~i~~qIa~g 618 (934)
.+++|+| |...|+|.++|+.+...... ...+ .... ..++..+++.++.|||.|
T Consensus 376 ~~~~v~E----------y~~~G~L~~~Lr~~r~~~~~-----------~~~~----~~~~~~~~L~~~dLlsfa~QIa~G 430 (609)
T KOG0200|consen 376 PLYVIVE----------YAEHGDLLEFLRKKRVTESI-----------DGSG----VFPNERDALTTKDLLSFAYQIANG 430 (609)
T ss_pred ceEEEEE----------eccCCcHHHHHHhccccccc-----------cccC----CCccccCCcCHHHHHHHHHHHHHH
Confidence 9999999 45556777777654300000 0000 0001 237888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
++||++.++|||||..+|||++.+. .+||+|||+|+............
T Consensus 431 Me~L~~~~~vHRDLAaRNVLi~~~~--~~kIaDFGlar~~~~~~~y~~~~------------------------------ 478 (609)
T KOG0200|consen 431 MEYLASVPCVHRDLAARNVLITKNK--VIKIADFGLARDHYNKDYYRTKS------------------------------ 478 (609)
T ss_pred HHHHhhCCccchhhhhhhEEecCCC--EEEEccccceeccCCCCceEecC------------------------------
Confidence 9999999999999999999997664 59999999999765544332111
Q ss_pred eeecCCC--CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc--hhHHHHHHhhccc-ccccCCCHHHHHH
Q 002343 699 FFTVGYG--SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES--FERDANIVKDRKD-LFLVEHIPEAVDL 773 (934)
Q Consensus 699 ~~t~~~G--T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~--~~~~~~i~~~~~~-~~~~~~~~e~~dL 773 (934)
..| ...|||||.+....|+.++|||||||+|||++|.|..||... .......++.... ..+....+++.++
T Consensus 479 ----~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~i 554 (609)
T KOG0200|consen 479 ----SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDL 554 (609)
T ss_pred ----CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 112 235999999999999999999999999999999999999873 2333444444444 3444557899999
Q ss_pred HHHcccCCCCCCcCHHHHHc
Q 002343 774 FTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~ 793 (934)
++.||+.+|++||+..++.+
T Consensus 555 M~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 555 MKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHhCCCcccCCCHHHHHH
Confidence 99999999999999999874
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=269.91 Aligned_cols=234 Identities=36% Similarity=0.555 Sum_probs=181.5
Q ss_pred CcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhHHh
Q 002343 485 SNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYV 559 (934)
Q Consensus 485 sfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~ 559 (934)
+||.||++... +|+.||+|++..... +...+|++ .++.++|+||+++++++......++++|++.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~-~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~-------- 71 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREIS-ILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDG-------- 71 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHH-HHHhCCCCcHHHHHhheeeCCEEEEEEeCCCC--------
Confidence 58999998665 489999999875442 34455655 67778999999999999999999999996554
Q ss_pred hcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEE
Q 002343 560 LSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639 (934)
Q Consensus 560 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl 639 (934)
++|.+++.. ...++...+..++.+++.||.|||+.+|+|+||+|+||++
T Consensus 72 --~~L~~~~~~-----------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~ 120 (244)
T smart00220 72 --GDLFDLLKK-----------------------------RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL 120 (244)
T ss_pred --CCHHHHHHh-----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE
Confidence 344443321 1125677889999999999999999999999999999999
Q ss_pred ecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCC
Q 002343 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR 719 (934)
Q Consensus 640 ~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~ 719 (934)
+.++ .++|+|||++......... ....|+..|+|||.+.+..
T Consensus 121 ~~~~--~~~l~d~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~pE~~~~~~ 162 (244)
T smart00220 121 DEDG--HVKLADFGLARQLDPGGLL------------------------------------TTFVGTPEYMAPEVLLGKG 162 (244)
T ss_pred CCCC--cEEEccccceeeecccccc------------------------------------ccccCCcCCCCHHHHccCC
Confidence 7665 4999999999876543210 0145788999999999888
Q ss_pred CcccccccchhhhhHHhhcCCCCCCCC--chhHHHHHHhhcccccccC---CCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 720 QTRAIDLFSLGCILFFCITGGKHPYGE--SFERDANIVKDRKDLFLVE---HIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 720 ~t~ksDIWSLGvILyeLltGg~~Pf~~--~~~~~~~i~~~~~~~~~~~---~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
++.++||||||+++|++++| ..||.. ................... ...++.+++.+||..+|++||++.++++|
T Consensus 163 ~~~~~Di~slG~~l~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 163 YGKAVDVWSLGVILYELLTG-KPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCchhhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 99999999999999999996 567754 2233333333222222222 56789999999999999999999999999
Q ss_pred CCC
Q 002343 795 PFF 797 (934)
Q Consensus 795 Pff 797 (934)
|||
T Consensus 242 ~~~ 244 (244)
T smart00220 242 PFF 244 (244)
T ss_pred CCC
Confidence 997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=269.17 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=191.1
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEEecc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD--FVYLSLERC 549 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--~~yLVmE~c 549 (934)
+.|.+.+.+|+|-|+.|+-+. ..+.+.++||.++........+|+..+.....|||||+++++..+.. ...||+|
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE-- 115 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE-- 115 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh--
Confidence 457778899999999999874 45678999999988777888999986655566999999999988754 5678999
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
++.+.++... ...++.-+++.++.+++.||.|+|++||+|
T Consensus 116 --------~v~n~Dfk~l--------------------------------y~tl~d~dIryY~~elLkALdyCHS~GImH 155 (338)
T KOG0668|consen 116 --------YVNNTDFKQL--------------------------------YPTLTDYDIRYYIYELLKALDYCHSMGIMH 155 (338)
T ss_pred --------hhccccHHHH--------------------------------hhhhchhhHHHHHHHHHHHHhHHHhcCccc
Confidence 5555444332 122455678999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
||+||.|++|+.... .++|+|.|||.+..++..... .+.+..|
T Consensus 156 RDVKPhNvmIdh~~r-kLrlIDWGLAEFYHp~~eYnV------------------------------------RVASRyf 198 (338)
T KOG0668|consen 156 RDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNV------------------------------------RVASRYF 198 (338)
T ss_pred ccCCcceeeechhhc-eeeeeecchHhhcCCCceeee------------------------------------eeehhhc
Confidence 999999999976544 589999999998877554321 3567789
Q ss_pred ccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCc--hhHHHHHHh---------------------------hcc
Q 002343 710 QAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGES--FERDANIVK---------------------------DRK 759 (934)
Q Consensus 710 ~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~--~~~~~~i~~---------------------------~~~ 759 (934)
.-||.+..- .|+.+-|+|||||++..|+....|+|... .++...+.+ ...
T Consensus 199 KGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~ 278 (338)
T KOG0668|consen 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHS 278 (338)
T ss_pred CCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccc
Confidence 999999764 57999999999999999999777776432 232222211 000
Q ss_pred cc----ccc-----CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 760 DL----FLV-----EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 760 ~~----~~~-----~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.. +.. -.++|+.||+.++|..|-.+|+||.|++.||||..
T Consensus 279 rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 279 RKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred cccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 00 000 02489999999999999999999999999999943
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=279.35 Aligned_cols=243 Identities=24% Similarity=0.387 Sum_probs=178.4
Q ss_pred eeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eEEEEE
Q 002343 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVYLSL 546 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-----~~yLVm 546 (934)
.+.||.|+||.||-. +-.+|+.||.|++..-.. ...++|++ ++...+|.|++..++..+-.. .+|+++
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~k-mLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIK-MLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHH-HHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 457999999999976 456799999999865432 45788887 778899999999988766543 356666
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|++..+|...| ...+.++.+.++-+++||++||+|||+.+
T Consensus 137 ELmQSDLHKII----------------------------------------VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ 176 (449)
T KOG0664|consen 137 ELMQSDLHKII----------------------------------------VSPQALTPDHVKVFVYQILRGLKYLHTAN 176 (449)
T ss_pred HHHHhhhhhee----------------------------------------ccCCCCCcchhhhhHHHHHhhhHHHhhcc
Confidence 64443333322 12456778889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|.||||||.|+|+ +.++.+||||||+|+..+.+.... +|..+-|
T Consensus 177 ILHRDIKPGNLLV--NSNCvLKICDFGLARvee~d~~~h----------------------------------MTqEVVT 220 (449)
T KOG0664|consen 177 ILHRDIKPGNLLV--NSNCILKICDFGLARTWDQRDRLN----------------------------------MTHEVVT 220 (449)
T ss_pred hhhccCCCccEEe--ccCceEEecccccccccchhhhhh----------------------------------hHHHHHH
Confidence 9999999999999 555679999999999766543211 1113457
Q ss_pred CccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCC-CchhHHHH------------------------HHhhccc
Q 002343 707 SGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDAN------------------------IVKDRKD 760 (934)
Q Consensus 707 ~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~------------------------i~~~~~~ 760 (934)
..|.|||++.+. .|+.++||||.|||+.|++.. +.-|. ...-++.. ++.....
T Consensus 221 QYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgR-rILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k 299 (449)
T KOG0664|consen 221 QYYRAPELLMGARRYTGAVDIWSVGCIFAELLQR-KILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR 299 (449)
T ss_pred HHhccHHHhhcchhhcCccceehhhHHHHHHHhh-hhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC
Confidence 789999999985 589999999999999999974 44442 21111111 1111110
Q ss_pred cc----------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 761 LF----------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 761 ~~----------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
.. +.....++.+++.+||..||++|.+.++.+.|++.-
T Consensus 300 ~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 300 APDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred CCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 00 011234788999999999999999999999999873
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=270.37 Aligned_cols=254 Identities=22% Similarity=0.277 Sum_probs=192.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEec-CCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESD-QDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~ 541 (934)
.++.....+-+|.||.||.+... +.+.|-||.++....+ ..+.| ..++....|||+..+.+++.. .++
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~e-s~lly~~sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQE-SMLLYGASHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHH-HHHHhcCcCCCccceeEEEeeccCc
Confidence 45777788999999999997332 3456777877544332 22333 346677789999999998754 567
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.++++. ++.-|+|..||...+.+... ..+.++..++..++.|++.|++|
T Consensus 363 P~V~y~----------~~~~gNLK~FL~~Cr~~~~~---------------------~aqtvtt~qlV~masQla~am~h 411 (563)
T KOG1024|consen 363 PFVLYP----------ATGVGNLKSFLQICRGDDPS---------------------YAQTVTTIQLVLMASQLAMAMEH 411 (563)
T ss_pred ceEEEe----------ccCcchHHHHHHHhccCCCc---------------------cccchhHHHHHHHHHHHHHHHHH
Confidence 778888 67778888888643321110 12345667889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++|||.||..+|++| |..+++||+|=.+++.+-+.....-...
T Consensus 412 lh~~~ViHkDiAaRNCvI--dd~LqVkltDsaLSRDLFP~DYhcLGDn-------------------------------- 457 (563)
T KOG1024|consen 412 LHNHGVIHKDIAARNCVI--DDQLQVKLTDSALSRDLFPGDYHCLGDN-------------------------------- 457 (563)
T ss_pred HHhcCcccchhhhhccee--hhheeEEeccchhccccCcccccccCCC--------------------------------
Confidence 999999999999999999 5568899999999998766544322111
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhcc-cccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRK-DLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~~-~~~~~~~~~e~~dLI~~~L~ 779 (934)
..-...||+||.+.+..|+.++|||||||+||||+|-|+.||.+....+ ...++... -..+.++++|+..++..||.
T Consensus 458 -EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWa 536 (563)
T KOG1024|consen 458 -ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWA 536 (563)
T ss_pred -CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHh
Confidence 1134579999999999999999999999999999999999998754333 33444444 34566778899999999999
Q ss_pred CCCCCCcCHHHHHc
Q 002343 780 PNPDLRPKAQNVLN 793 (934)
Q Consensus 780 ~DP~~RPTa~evL~ 793 (934)
.+|++||+.+|+..
T Consensus 537 llpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 537 LLPEERPSFSQLVI 550 (563)
T ss_pred cCcccCCCHHHHHH
Confidence 99999999999863
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-30 Score=281.50 Aligned_cols=292 Identities=26% Similarity=0.315 Sum_probs=194.1
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
...+.+.|...++||+|+|++||++... ..+.||+|.+..... .....|+..+-....+.||+.+.+++..++.+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 3566778889999999999999997332 568999999976544 56778888676777899999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
.+||||.+ .....+++ ..++..+++.+++.++.||+|+
T Consensus 111 ~ivlp~~~----------H~~f~~l~--------------------------------~~l~~~~i~~Yl~~ll~Al~~~ 148 (418)
T KOG1167|consen 111 AIVLPYFE----------HDRFRDLY--------------------------------RSLSLAEIRWYLRNLLKALAHL 148 (418)
T ss_pred EEEecccC----------ccCHHHHH--------------------------------hcCCHHHHHHHHHHHHHHhhhh
Confidence 99999544 44443332 2245678899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCC------CCcchhhHHHHHHHh-hhhhhccc--c
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA------TGMDLQLVYLVSILL-KLVICECV--F 693 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~--~ 693 (934)
|.+|||||||||+|+|.+..-. .-.|.|||||...+.......... +.+.....-..+... ......+. -
T Consensus 149 h~~GIvHRDiKpsNFL~n~~t~-rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 149 HKNGIVHRDIKPSNFLYNRRTQ-RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hccCccccCCCccccccccccC-CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 9999999999999999975432 467999999985332211000000 000000000000000 00000000 0
Q ss_pred ccccceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-----HHHHHH-----------h
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-----RDANIV-----------K 756 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----~~~~i~-----------~ 756 (934)
...........||+||.|||++... ..+.++||||.|||+.-++++..|+|....+ ..+.+. .
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 1111122345799999999999764 4699999999999999999964444432111 111000 0
Q ss_pred hc------cc-------------c-----c-----------c-cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 757 DR------KD-------------L-----F-----------L-VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 757 ~~------~~-------------~-----~-----------~-~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+. .. . . . ...+..+.||+.+||..||.+|.||++.|+||||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 00 0 0 0 0012378899999999999999999999999999754
Q ss_pred cc
Q 002343 801 DT 802 (934)
Q Consensus 801 ~~ 802 (934)
+.
T Consensus 388 ~~ 389 (418)
T KOG1167|consen 388 DR 389 (418)
T ss_pred hh
Confidence 43
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=253.72 Aligned_cols=205 Identities=28% Similarity=0.418 Sum_probs=161.4
Q ss_pred eeeecccCcEEEEEE-EEecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
...||+|++|.|-+- +.++|+..|||++...- ....++|+...++...+|.+|++||...+...+||.||.+..+
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tS 130 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTS 130 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhh
Confidence 568999999988653 66889999999986442 2355677777788889999999999999999999999987776
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRD 631 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-gIVHRD 631 (934)
|.-+-.. -+.+....|+..+-+|+..++.||.|||++ .|||||
T Consensus 131 ldkfy~~------------------------------------v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRD 174 (282)
T KOG0984|consen 131 LDKFYRK------------------------------------VLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRD 174 (282)
T ss_pred HHHHHHH------------------------------------HHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhcc
Confidence 6544210 011245578999999999999999999975 899999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
+||+||||+.+|. +||||||+|-.+.+.... |...|...|||
T Consensus 175 vKPsNiLIn~~Gq--VKiCDFGIsG~L~dSiAk------------------------------------t~daGCkpYma 216 (282)
T KOG0984|consen 175 VKPSNILINYDGQ--VKICDFGISGYLVDSIAK------------------------------------TMDAGCKPYMA 216 (282)
T ss_pred CCcceEEEccCCc--EEEcccccceeehhhhHH------------------------------------HHhcCCCccCC
Confidence 9999999987775 999999999877653221 11358889999
Q ss_pred chhcc----cCCCcccccccchhhhhHHhhcCCCCCCCC---chhHHHHHHhh
Q 002343 712 PEQLL----QGRQTRAIDLFSLGCILFFCITGGKHPYGE---SFERDANIVKD 757 (934)
Q Consensus 712 PE~l~----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~---~~~~~~~i~~~ 757 (934)
||.+. +..|+-++||||||+.+.||+++ ++||.. .+++..+++..
T Consensus 217 PEri~~e~n~~gY~vksDvWSLGItmiElA~l-r~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 217 PERINPELNQKGYSVKSDVWSLGITMIEMAIL-RFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhcCcccCcccceeehhhhhhhhhhhhhhhc-cccccccCCHHHHHHHHhcC
Confidence 99885 34789999999999999999996 777754 34444444443
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=293.32 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=195.2
Q ss_pred ecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
-...|.+...+|.|+||.||++ +...++..|||+++-... ....+||- +++.++|||||.|+|.+...+.+|++|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~-~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIG-MLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcccccccccee-eeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 3456778889999999999998 456799999999875432 23445654 778899999999999999999999999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||++ +|.|. |.-. .++++.++..+++..+.||+|||++
T Consensus 92 EycgggslQdi-y~~T---------------------------------------gplselqiayvcRetl~gl~ylhs~ 131 (829)
T KOG0576|consen 92 EYCGGGSLQDI-YHVT---------------------------------------GPLSELQIAYVCRETLQGLKYLHSQ 131 (829)
T ss_pred EecCCCcccce-eeec---------------------------------------ccchhHHHHHHHhhhhccchhhhcC
Confidence 99996 56554 3322 3455668889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|-+|||||-.|||++..++ +|++|||.+..+...... .....|
T Consensus 132 gk~hRdiKGanilltd~gD--vklaDfgvsaqitati~K-----------------------------------rksfiG 174 (829)
T KOG0576|consen 132 GKIHRDIKGANILLTDEGD--VKLADFGVSAQITATIAK-----------------------------------RKSFIG 174 (829)
T ss_pred CcccccccccceeecccCc--eeecccCchhhhhhhhhh-----------------------------------hhcccC
Confidence 9999999999999988877 899999998765432111 112679
Q ss_pred CCccccchhc---ccCCCcccccccchhhhhHHhhcCCCCC-CCCchhHHHHHHhhccccc-----ccCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQL---LQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKDLF-----LVEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l---~~~~~t~ksDIWSLGvILyeLltGg~~P-f~~~~~~~~~i~~~~~~~~-----~~~~~~e~~dLI~~ 776 (934)
|+.|||||+. +.+.|...+|||++|+...|+.-- ++| |.-...+....+....... ....++.+.+|++.
T Consensus 175 tpywmapEvaaverkggynqlcdiwa~gitAiel~eL-qpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~ 253 (829)
T KOG0576|consen 175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGEL-QPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKG 253 (829)
T ss_pred CccccchhHHHHHhcccccccccccccccchhhhhhc-CCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHH
Confidence 9999999987 456799999999999999998775 444 4433344433332221111 12245788999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+|.++|++||+++.+|+|||....
T Consensus 254 altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 254 ALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HhcCCCccCCChhhheeceeeccc
Confidence 999999999999999999998665
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=272.80 Aligned_cols=195 Identities=27% Similarity=0.427 Sum_probs=156.1
Q ss_pred eecce--EEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hH---------HHHHHHHHHHhCC---CCceeEE
Q 002343 470 RIGKL--VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DV---------ALKEIQNLIASDQ---HPNIVRW 532 (934)
Q Consensus 470 ~i~~~--~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~---------~~~Ei~~ll~~l~---HpNIV~l 532 (934)
...+. |...+.+|.|+||.|+++.. .+...|+||.+.+... +. .-.||+ +|+.++ |+||+++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIq-Ila~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQ-ILATLNKHSHENILKL 634 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHH-HHHHhhhcCccchhhh
Confidence 34444 78889999999999999844 4567899999877542 11 235777 667776 9999999
Q ss_pred EEEEecCCeEEEEEecccC--ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHH
Q 002343 533 YGVESDQDFVYLSLERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (934)
Q Consensus 533 ~g~~~~~~~~yLVmE~c~~--sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 610 (934)
+++|++++++||+||.-.. +|.|+|.. ...+.+.+.+-
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~----------------------------------------kp~m~E~eAk~ 674 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEF----------------------------------------KPRMDEPEAKL 674 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhc----------------------------------------cCccchHHHHH
Confidence 9999999999999996543 34444321 34567888999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhc
Q 002343 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICE 690 (934)
Q Consensus 611 i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (934)
|++||+.|++|||++||||||||-+||.++ ++.++||+|||.|.....+.
T Consensus 675 IFkQV~agi~hlh~~~ivhrdikdenvivd--~~g~~klidfgsaa~~ksgp---------------------------- 724 (772)
T KOG1152|consen 675 IFKQVVAGIKHLHDQGIVHRDIKDENVIVD--SNGFVKLIDFGSAAYTKSGP---------------------------- 724 (772)
T ss_pred HHHHHHhccccccccCceecccccccEEEe--cCCeEEEeeccchhhhcCCC----------------------------
Confidence 999999999999999999999999999995 44579999999887544321
Q ss_pred cccccccceeecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCC
Q 002343 691 CVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYG 745 (934)
Q Consensus 691 ~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~ 745 (934)
+...+||.+|.|||++.+.+| +..-|||++|++||-++.. ..||.
T Consensus 725 ---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk-enpyy 770 (772)
T KOG1152|consen 725 ---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK-ENPYY 770 (772)
T ss_pred ---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec-cCCCc
Confidence 334789999999999999998 7889999999999999984 55654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=307.26 Aligned_cols=230 Identities=16% Similarity=0.180 Sum_probs=142.6
Q ss_pred CC-CceeEEEEEE-------ecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhH
Q 002343 525 QH-PNIVRWYGVE-------SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (934)
Q Consensus 525 ~H-pNIV~l~g~~-------~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (934)
.| +||+++++++ .....++.+||+++++|.+++...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~------------------------------------ 73 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP------------------------------------ 73 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc------------------------------------
Confidence 45 5777788876 233467888887666666555210
Q ss_pred hhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhh
Q 002343 597 LWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQL 676 (934)
Q Consensus 597 ~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~ 676 (934)
...+++.+++.+++||+.||+|||++|||||||||+||||+..+. +|++|||++.....+.... ....+...
T Consensus 74 ---~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~--~k~~d~~~~~~~~~~~~~~---~ki~DfG~ 145 (793)
T PLN00181 74 ---DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNH--VSFIESASCSDSGSDEDAT---TKSREIGS 145 (793)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCc--EEEeeccccCcccccccCc---cccccccc
Confidence 234678889999999999999999999999999999999965332 4555554443321110000 00000000
Q ss_pred HHHHH----HHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH
Q 002343 677 VYLVS----ILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA 752 (934)
Q Consensus 677 ~~~~~----~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~ 752 (934)
..... .........+.... .......+||+.|||||++.+..|+.++|||||||+||||++| .+|+........
T Consensus 146 a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~-~~~~~~~~~~~~ 223 (793)
T PLN00181 146 SRREEILSERRIEKLEEVKKQPF-PMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP-VSSREEKSRTMS 223 (793)
T ss_pred ccccccccccchhhhhccccCCC-cccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC-CCchhhHHHHHH
Confidence 00000 00000000000000 0011224699999999999999999999999999999999995 666553322211
Q ss_pred HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 753 NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 753 ~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.+.....+.......+++.+++.+||++||.+||++.|+++||||...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 224 SLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred HHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 111111111112235678899999999999999999999999999764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=232.25 Aligned_cols=207 Identities=38% Similarity=0.660 Sum_probs=170.1
Q ss_pred ecccCcEEEEEEEEec-CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc-CChh
Q 002343 481 IAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLN 554 (934)
Q Consensus 481 IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~-~sL~ 554 (934)
||+|++|.||++.... ++.+++|++..... +...+|++ .++.+.|++|+++++++......+++||++. ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~-~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIE-ILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHH-HHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999986544 89999999976654 45666765 7788899999999999999999999999766 3444
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKP 634 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP 634 (934)
+++ ... ...++..++..++.+++++|+|||+.|++|+||+|
T Consensus 80 ~~~-----------~~~----------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~ 120 (215)
T cd00180 80 DLL-----------KEN----------------------------EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120 (215)
T ss_pred HHH-----------Hhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 443 211 02356778899999999999999999999999999
Q ss_pred CeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccch
Q 002343 635 QNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713 (934)
Q Consensus 635 ~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE 713 (934)
.||+++. ++ .++|+|||.+.......... ....+...|++||
T Consensus 121 ~ni~~~~~~~--~~~l~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~pe 163 (215)
T cd00180 121 ENILLDSDNG--KVKLADFGLSKLLTSDKSLL-----------------------------------KTIVGTPAYMAPE 163 (215)
T ss_pred hhEEEeCCCC--cEEEecCCceEEccCCcchh-----------------------------------hcccCCCCccChh
Confidence 9999976 44 48999999998765432100 0134778899999
Q ss_pred hcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHH
Q 002343 714 QLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 714 ~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL 792 (934)
.+... .++.+.|+|++|++++++ .++.+++.+|++.||++||++.+++
T Consensus 164 ~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~ 212 (215)
T cd00180 164 VLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEIL 212 (215)
T ss_pred HhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHh
Confidence 99887 788999999999999998 6789999999999999999999999
Q ss_pred cCC
Q 002343 793 NHP 795 (934)
Q Consensus 793 ~HP 795 (934)
+|+
T Consensus 213 ~~~ 215 (215)
T cd00180 213 EHL 215 (215)
T ss_pred hCC
Confidence 885
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=236.97 Aligned_cols=238 Identities=22% Similarity=0.359 Sum_probs=175.6
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEE-EEecCCeEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYG-VESDQDFVYLS 545 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g-~~~~~~~~yLV 545 (934)
.+.+.|.+++.||+|.||.+.++.+ ...+.+++|-+.+... ....+|+.--+....|.|||.-|+ .|+..++..++
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3456688899999999999999844 5678899998876543 455677654444567999999876 47888899999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
+|+|+ .|+|.+-+. ..|+-+...++++.|+++|+.|+|++
T Consensus 101 qE~aP----------~gdL~snv~------------------------------~~GigE~~~K~v~~ql~SAi~fMHsk 140 (378)
T KOG1345|consen 101 QEFAP----------RGDLRSNVE------------------------------AAGIGEANTKKVFAQLLSAIEFMHSK 140 (378)
T ss_pred eccCc----------cchhhhhcC------------------------------cccccHHHHHHHHHHHHHHHHHhhcc
Confidence 99554 455543221 35666777889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
++||||||.+||||-...-.++||||||+.+......... --
T Consensus 141 nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~--------------------------------------~~ 182 (378)
T KOG1345|consen 141 NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL--------------------------------------EY 182 (378)
T ss_pred chhhcccccceEEEecCCccEEEeeecccccccCceehhh--------------------------------------hh
Confidence 9999999999999976555589999999987654322111 12
Q ss_pred CCccccchhccc---CC--CcccccccchhhhhHHhhcCCCCCCCCchh---HHHHHHhhcc---cc---cccCCCHHHH
Q 002343 706 SSGWQAPEQLLQ---GR--QTRAIDLFSLGCILFFCITGGKHPYGESFE---RDANIVKDRK---DL---FLVEHIPEAV 771 (934)
Q Consensus 706 T~~Y~APE~l~~---~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~~---~~~~i~~~~~---~~---~~~~~~~e~~ 771 (934)
+..|.|||.+.. ++ ..+..|||.||+++|+++|| .+||..... ...+..++.. .. .....++.+.
T Consensus 183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG-~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~ 261 (378)
T KOG1345|consen 183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTG-KFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKAL 261 (378)
T ss_pred hcccCCcHHHhhccccceEecccccchheeeeeeeeecC-CCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHH
Confidence 456999998753 33 37889999999999999996 788864321 2223333221 11 2234578899
Q ss_pred HHHHHcccCCCCCCc
Q 002343 772 DLFTRLLDPNPDLRP 786 (934)
Q Consensus 772 dLI~~~L~~DP~~RP 786 (934)
.+.++-|.+++++|-
T Consensus 262 r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 262 RLFKKSLTPRFKDRC 276 (378)
T ss_pred HHHHHhcCCcccccc
Confidence 999999999999993
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-25 Score=222.84 Aligned_cols=147 Identities=21% Similarity=0.190 Sum_probs=113.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHH
Q 002343 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680 (934)
Q Consensus 601 ~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~ 680 (934)
.++++.+++.++.||+.||+|||+++ ||+|||++.++ .+|+ ||+++......
T Consensus 12 ~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~--~~~~--fG~~~~~~~~~------------------ 63 (176)
T smart00750 12 RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG--LLKL--DGSVAFKTPEQ------------------ 63 (176)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc--ceee--ccceEeecccc------------------
Confidence 45789999999999999999999998 99999996655 4777 99987654311
Q ss_pred HHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHH-HHHhh
Q 002343 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDA-NIVKD 757 (934)
Q Consensus 681 ~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~-~i~~~ 757 (934)
..||+.|||||++.+..++.++|||||||++|||++| .+||..... ... .+...
T Consensus 64 ----------------------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~p~~~~~~~~~~~~~~~~~ 120 (176)
T smart00750 64 ----------------------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDY-ELPYNEERELSAILEILLNG 120 (176)
T ss_pred ----------------------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhC-CCCccccchhcHHHHHHHHH
Confidence 2488999999999999999999999999999999996 567654321 111 12211
Q ss_pred ccccc------ccCCCH--HHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 758 RKDLF------LVEHIP--EAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 758 ~~~~~------~~~~~~--e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
..... ...... ++.++|.+||..||.+||++.++++|+|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 121 MPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 11110 111112 689999999999999999999999999863
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=219.81 Aligned_cols=193 Identities=34% Similarity=0.575 Sum_probs=152.4
Q ss_pred EEeeeecccCcEEEEEEEEec-CcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 476 VFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
.+.+.||.|++|+||++.... ++.+|+|.+.... .+...+|+. .+..++|+|++++++++...+..++++|++.
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIR-ILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHH-HHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 456789999999999986654 8999999997653 234455655 6677899999999999999999999999666
Q ss_pred C-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCC-CCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 551 C-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANG-HPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 551 ~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
+ +|.+++ .. ... +++..+..++.+++.+|.|||+++++
T Consensus 81 ~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 120 (225)
T smart00221 81 GGDLFDYL-----------RK-----------------------------KGGKLSEEEARFYLRQILEALEYLHSLGIV 120 (225)
T ss_pred CCCHHHHH-----------Hh-----------------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5 444443 21 111 56778899999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
|+||+|.||+++.++ .++|+|||++.......... .....++..
T Consensus 121 h~di~~~ni~v~~~~--~~~l~d~g~~~~~~~~~~~~----------------------------------~~~~~~~~~ 164 (225)
T smart00221 121 HRDLKPENILLGMDG--LVKLADFGLARFIHRDLAAL----------------------------------LKTVKGTPF 164 (225)
T ss_pred cCCCCHHHEEEcCCC--CEEEeeCceeeEecCccccc----------------------------------ccceeccCC
Confidence 999999999997654 59999999998765432000 001357888
Q ss_pred cccchhc-ccCCCcccccccchhhhhHHhhcCCCCCCCC
Q 002343 709 WQAPEQL-LQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746 (934)
Q Consensus 709 Y~APE~l-~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~ 746 (934)
|++||.+ ....++.++||||||+++++|++| +.||..
T Consensus 165 ~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g-~~pf~~ 202 (225)
T smart00221 165 YLAPEVLLGGKGYGEAVDIWSLGVILYELLWG-PEPFSG 202 (225)
T ss_pred cCCHhHhcCCCCCCchhhHHHHHHHHHHHHHC-CCCccc
Confidence 9999998 666778899999999999999995 777754
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=204.72 Aligned_cols=255 Identities=31% Similarity=0.457 Sum_probs=183.8
Q ss_pred EEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCC-ceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHP-NIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~Hp-NIV~l~g~~~~~~~~yLVmE 547 (934)
|.+.+.||.|+||.||++... ..+|+|.+..... ....+|+. +++.+.|+ ||+++++.+......++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQ-ILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHH-HHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 566788999999999997555 8899999865432 23455655 77778877 79999999988888999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|.+ +++.+++..... ...++......++.|++.++.|+|+.++
T Consensus 79 ~~~~----------~~l~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~l~~~H~~~~ 122 (384)
T COG0515 79 YVDG----------GSLEDLLKKIGR--------------------------KGPLSESEALFILAQILSALEYLHSKGI 122 (384)
T ss_pred cCCC----------CcHHHHHHhccc--------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 6664 333322211000 0245677889999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++..+. .++++|||+++.+.......... .......||.
T Consensus 123 ~hrd~kp~nil~~~~~~-~~~l~dfg~~~~~~~~~~~~~~~-----------------------------~~~~~~~~t~ 172 (384)
T COG0515 123 IHRDIKPENILLDRDGR-VVKLIDFGLAKLLPDPGSTSSIP-----------------------------ALPSTSVGTP 172 (384)
T ss_pred eccCCCHHHeeecCCCC-eEEEeccCcceecCCCCcccccc-----------------------------cccccccccc
Confidence 99999999999976542 48999999998655433221100 0112257999
Q ss_pred ccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccc--c-ccCCC------HHH
Q 002343 708 GWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDL--F-LVEHI------PEA 770 (934)
Q Consensus 708 ~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~--~-~~~~~------~e~ 770 (934)
.|+|||.+.+ ..+....|+||+|++++++++| ..||.... ......+...... . ..... ..+
T Consensus 173 ~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (384)
T COG0515 173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG-LPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAA 251 (384)
T ss_pred ccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHH
Confidence 9999999987 5789999999999999999996 55565443 2222222222211 1 11111 478
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.+++.+|+..+|..|.++.+...++|...
T Consensus 252 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 280 (384)
T COG0515 252 SDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280 (384)
T ss_pred HHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence 89999999999999999999998866543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-23 Score=235.22 Aligned_cols=238 Identities=26% Similarity=0.376 Sum_probs=185.0
Q ss_pred eecccCcEEEEEE----EEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEEeccc
Q 002343 480 EIAKGSNGTVVLE----GNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 480 ~IG~GsfGtVy~~----~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
.+|+|+||.|++. +...|..+|+|++.+... ....+.+..+++..+ ||.+|+++-.++.+..+|++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld--- 77 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD--- 77 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhh---
Confidence 3799999999975 445577899998865432 112222233555555 9999999999999999999999
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+..+|.+...+.. ...+.+.....+...++.|++++|+.+|+||
T Consensus 78 -------~~rgg~lft~l~~-----------------------------~~~f~~~~~~~~~aelaLald~lh~l~iiyr 121 (612)
T KOG0603|consen 78 -------FLRGGDLFTRLSK-----------------------------EVMFDELDVAFYLAELALALDHLHKLGIAYR 121 (612)
T ss_pred -------hcccchhhhcccc-----------------------------CCchHHHHHHHHHHHHHHHHhhcchhHHHHh
Confidence 6666666554432 1223455677888899999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
|+|++||+++.+|. +|+.|||+++..-.... .|||..||
T Consensus 122 d~k~enilld~~Gh--i~~tdfglske~v~~~~---------------------------------------~cgt~eym 160 (612)
T KOG0603|consen 122 DYKLENVLLLLEGH--IKLTDFGLSKEAVKEKI---------------------------------------ACGTYEYR 160 (612)
T ss_pred cccccceeecccCc--cccCCchhhhHhHhhhh---------------------------------------cccchhhh
Confidence 99999999977775 89999999987654321 36999999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC---
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK--- 787 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT--- 787 (934)
|||++. ....++|.||||++++||+|| ..||.. .....+.......+.+.+.++++++..|+..+|.+|..
T Consensus 161 ApEI~~--gh~~a~D~ws~gvl~felltg-~~pf~~---~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~ 234 (612)
T KOG0603|consen 161 APEIIN--GHLSAADWWSFGVLAFELLTG-TLPFGG---DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGP 234 (612)
T ss_pred hhHhhh--ccCCcccchhhhhhHHHHhhC-CCCCch---HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCc
Confidence 999998 678899999999999999996 666666 33344444445556677889999999999999999965
Q ss_pred --HHHHHcCCCCCCccch
Q 002343 788 --AQNVLNHPFFWTADTR 803 (934)
Q Consensus 788 --a~evL~HPff~~~~~~ 803 (934)
+.|+++|+||+..++.
T Consensus 235 ~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 235 DGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred chhHHHhccchheeeeHh
Confidence 4799999999887765
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7e-23 Score=244.76 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=174.0
Q ss_pred EeeeecccCcEEEEEEEE-ecCcEEEEEEee----cCChhHH----HHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 477 FNKEIAKGSNGTVVLEGN-YEGRSVAVKRLV----KTHHDVA----LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~----~~~~~~~----~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
....+|.|++|.|+.... ......+.|... ....+.. ..++-.+-..+.|||++.......+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 466899999997766533 233444444332 2211111 1111124456799999888877777666666699
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||+.+|..++.. ...+...++..+++|++.||+|||+.||
T Consensus 402 ~~~~Dlf~~~~~----------------------------------------~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 402 YCPYDLFSLVMS----------------------------------------NGKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred cccHHHHHHHhc----------------------------------------ccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 998755544411 1134456778999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
.||||||+|+|+..++ .+||+|||.+..+.-....... .....+|+.
T Consensus 442 ahrdlK~enll~~~~g--~lki~Dfg~~~vf~~~~e~~~~-------------------------------~~~g~~gS~ 488 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENG--ILKIIDFGAASVFRYPWEKNIH-------------------------------ESSGIVGSD 488 (601)
T ss_pred eeccCccccEEEecCC--ceEEeecCcceeeccCcchhhh-------------------------------hhcCcccCC
Confidence 9999999999998776 4999999999876544322111 112267999
Q ss_pred ccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHH-----HHHhh-----cccccccCCCHHHHHHHHH
Q 002343 708 GWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDA-----NIVKD-----RKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 708 ~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----~i~~~-----~~~~~~~~~~~e~~dLI~~ 776 (934)
.|+|||++.+..| ...+||||.|++++.|.+| +.||.-....+. +...+ .+.........+.+.+|.+
T Consensus 489 pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~-~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 567 (601)
T KOG0590|consen 489 PYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG-RFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYR 567 (601)
T ss_pred cCcCcccccccccCcchhhhhhccceEEEEecC-CCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHH
Confidence 9999999999999 5679999999999999997 777743322111 00000 0111111234578899999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||+.||.+|.|+++|++.+||+..+.
T Consensus 568 ~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 568 MLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred HccCChhheecHHHHhhChHhhhcce
Confidence 99999999999999999999976543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=217.74 Aligned_cols=139 Identities=21% Similarity=0.175 Sum_probs=104.2
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe--cCcEEEEEEeecCC--------hhHHHHHHHHHHHhCCCCceeE-EEEEEe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY--EGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVR-WYGVES 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~--~g~~VAVK~l~~~~--------~~~~~~Ei~~ll~~l~HpNIV~-l~g~~~ 537 (934)
+.+...|.+.+.||+|+||+||++... +++.||||++.... .....+|+. +++.++|+|||. +++.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~-iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIR-ALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHH-HHHhccCCCCCcEEEEc--
Confidence 456677999999999999999998553 57888999875321 123456665 888999999984 5542
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+..|||||||.+. +|.. +.. . . ...++.|++.
T Consensus 91 --~~~~LVmE~~~G~----------~L~~-~~~------------------------------~--~---~~~~~~~i~~ 122 (365)
T PRK09188 91 --GKDGLVRGWTEGV----------PLHL-ARP------------------------------H--G---DPAWFRSAHR 122 (365)
T ss_pred --CCcEEEEEccCCC----------CHHH-hCc------------------------------c--c---hHHHHHHHHH
Confidence 4589999977653 2211 000 0 0 1357789999
Q ss_pred HHHHHHHCCCcccCC-CCCeEEEecCCCceEEEeeccccccccC
Q 002343 618 GLSHLHEIGLIHRDL-KPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 618 gL~yLHs~gIVHRDL-KP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
||+|||++||+|||| ||+|||++.++ .+||+|||+|+.+..
T Consensus 123 aL~~lH~~gIiHrDL~KP~NILv~~~~--~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 123 ALRDLHRAGITHNDLAKPQNWLMGPDG--EAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHHHHCCCeeCCCCCcceEEEcCCC--CEEEEECccceeccc
Confidence 999999999999999 99999996555 499999999998754
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=206.34 Aligned_cols=252 Identities=22% Similarity=0.250 Sum_probs=174.8
Q ss_pred eEEEeeeecccCcEEEEEEEEec--CcEEEEEEeecCCh---hHHHHHHHHHHHhCC----CCceeEEEEEE-ecCCeEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYE--GRSVAVKRLVKTHH---DVALKEIQNLIASDQ----HPNIVRWYGVE-SDQDFVY 543 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~--g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~----HpNIV~l~g~~-~~~~~~y 543 (934)
.|.+.+.||+|+||.||++.... ...+|+|....... .....|.. ++..+. -+++.++++.. ....+.|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~-vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQ-VLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHH-HHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 79999999999999999986544 35899998765322 13344444 333333 36899999998 5888999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||++++.+|.++..... .+.++...+..|+.|++.+|++||
T Consensus 98 iVM~l~G~sL~dl~~~~~--------------------------------------~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 98 IVMSLLGPSLEDLRKRNP--------------------------------------PGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred EEEeccCccHHHHHHhCC--------------------------------------CCCcCHhHHHHHHHHHHHHHHHHH
Confidence 999999999988763211 234677789999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCC-C--ceEEEeeccccc--cccCCCccc-ccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 624 EIGLIHRDLKPQNVLISKDK-S--FCAKLSDMGISK--RLQGDMSCL-TQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~-~--~~vKLsDFGlAk--~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
+.|+|||||||+|+++.... . ..+.|.|||+|+ ......... ......
T Consensus 140 ~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~-------------------------- 193 (322)
T KOG1164|consen 140 SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQ-------------------------- 193 (322)
T ss_pred hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCC--------------------------
Confidence 99999999999999997543 1 368999999999 432222110 000000
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcccc----cccCCCHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKDL----FLVEHIPEAV 771 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~~----~~~~~~~e~~ 771 (934)
.....||..|+++.+..+...+.+.|+||++.++.+++.| ..||..... ............ .......++.
T Consensus 194 --~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g-~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (322)
T KOG1164|consen 194 --KGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKG-SLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFA 270 (322)
T ss_pred --ccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcC-CCCCccccccchHHHHHHHhhhhccccccCCChHHHH
Confidence 0114599999999999999999999999999999999996 577743221 111111111111 1112234566
Q ss_pred HHHHHcccCCCCCCcCHHHHHc
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~ 793 (934)
++...+-..+...+|....+..
T Consensus 271 ~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 271 KILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHHHHhhccCCcCCCCHHHHHH
Confidence 6666666667777777666554
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-21 Score=194.43 Aligned_cols=209 Identities=22% Similarity=0.262 Sum_probs=160.1
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-hhHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLV 545 (934)
..++..|.+.+.||.|+||.+|.+ ....|..||||.-.... ......|-. +-..++ ...|.++..+..+.++-.+|
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEsk-vY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESK-VYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHH-HHHHhccCCCCchhhhhccccccceee
Confidence 467788999999999999999998 56789999999865432 233344433 333333 46777788888889999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+.+.+|+|++.+.. ..++...++.++-|++.-++|+|.+
T Consensus 90 MdLLGPsLEdLfnfC~---------------------------------------R~ftmkTvLMLaDQml~RiEyvH~r 130 (341)
T KOG1163|consen 90 MDLLGPSLEDLFNFCS---------------------------------------RRFTMKTVLMLADQMLSRIEYVHLR 130 (341)
T ss_pred eeccCccHHHHHHHHh---------------------------------------hhhhHHhHHHHHHHHHHHHHHHHhh
Confidence 9999999999885432 2345567889999999999999999
Q ss_pred CCcccCCCCCeEEEecCCC-ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 626 GLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~-~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+.|||||||+|.|..-+.. -.+.++|||||+...+......-.... -+...
T Consensus 131 ~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre----------------------------~r~lt 182 (341)
T KOG1163|consen 131 NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYRE----------------------------DRNLT 182 (341)
T ss_pred ccccccCCccceeeccccccceEEEEeccchhhhccccccccCcccc----------------------------CCccc
Confidence 9999999999999964432 247899999999887644322111100 01256
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~ 746 (934)
||..|.+--...+...+.+-|+=|+|.+|.++.-| ..||..
T Consensus 183 GTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG-~LPWQg 223 (341)
T KOG1163|consen 183 GTARYASINAHLGIEQSRRDDMESVGYVLMYFNRG-SLPWQG 223 (341)
T ss_pred eeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecC-CCcccc
Confidence 99999998888888889999999999999988875 778765
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=203.89 Aligned_cols=206 Identities=21% Similarity=0.281 Sum_probs=140.5
Q ss_pred CCCCceeEEEEEEec---------------------------CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccch
Q 002343 524 DQHPNIVRWYGVESD---------------------------QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN 576 (934)
Q Consensus 524 l~HpNIV~l~g~~~~---------------------------~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~ 576 (934)
-.|||||++.++|.+ ...+|+||..+.++|.+++....
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~--------------- 337 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH--------------- 337 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---------------
Confidence 369999999998765 12589999999988888774321
Q ss_pred hHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEe--cCCCceEEEeeccc
Q 002343 577 LLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGI 654 (934)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~--~d~~~~vKLsDFGl 654 (934)
.+.....-++.|+++|+.|||.+||.|||+|.+||||. +|+--.+.|+|||+
T Consensus 338 --------------------------~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC 391 (598)
T KOG4158|consen 338 --------------------------RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGC 391 (598)
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccce
Confidence 12234557888999999999999999999999999995 34444678999998
Q ss_pred cccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCC------Ccccccccc
Q 002343 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR------QTRAIDLFS 728 (934)
Q Consensus 655 Ak~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~------~t~ksDIWS 728 (934)
|---....-.....+- . -...|...-||||+....+ --.++|.|+
T Consensus 392 cLAd~~hGlqlpy~S~---------------------~--------Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA 442 (598)
T KOG4158|consen 392 CLADDNHGLQLPYESD---------------------E--------VDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWA 442 (598)
T ss_pred eeeccccccccccccc---------------------c--------ccCCCcceecchhhhhcCCCCceeeccchhhhhh
Confidence 7432221111110000 0 0134778899999986432 135899999
Q ss_pred hhhhhHHhhcCCCCCCCCc--hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHH---HHHcCCCCCCc
Q 002343 729 LGCILFFCITGGKHPYGES--FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ---NVLNHPFFWTA 800 (934)
Q Consensus 729 LGvILyeLltGg~~Pf~~~--~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~---evL~HPff~~~ 800 (934)
.|.+.||+++...|+|+.. .-.........-+..+....+.+++|+..+|+.||++|+++. .++ |-++|..
T Consensus 443 ~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl-~LsLw~~ 518 (598)
T KOG4158|consen 443 AGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL-NLSLWRM 518 (598)
T ss_pred hhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH-HHHHhcC
Confidence 9999999998655555421 111222233333444556678999999999999999998853 444 3444543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-20 Score=193.93 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=164.4
Q ss_pred eeecceEEEeeeecccCcEEEEEE-EEecCcEEEEEEeecCC-hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..+|-.|.++++||+|+||.++.+ ...++++||||.-.... ..+...|.....-....++|...|-+...+.+-.|||
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 478889999999999999999997 56889999999654332 2333344442222336799999999988899999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+.+.+|+|++... ...++...+..++.|++.-++|+|++.
T Consensus 104 dLLGPSLEDLFD~C---------------------------------------gR~FSvKTV~miA~Qmi~rie~vH~k~ 144 (449)
T KOG1165|consen 104 DLLGPSLEDLFDLC---------------------------------------GRRFSVKTVAMIAKQMITRIEYVHEKD 144 (449)
T ss_pred hhhCcCHHHHHHHh---------------------------------------cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence 99999999987432 345677889999999999999999999
Q ss_pred CcccCCCCCeEEEecCC---CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 627 LIHRDLKPQNVLISKDK---SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~---~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
.|.|||||+|.||..-+ .-.+.|+|||+|+...+........-.. ....
T Consensus 145 LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE----------------------------~KSL 196 (449)
T KOG1165|consen 145 LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYRE----------------------------HKSL 196 (449)
T ss_pred eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccc----------------------------cccc
Confidence 99999999999996422 1258999999999887654332211100 0114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~ 746 (934)
.||..||+--.-.+...+.+-|+=|||-++++.|-| ..||..
T Consensus 197 sGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRG-sLPWQG 238 (449)
T KOG1165|consen 197 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG-SLPWQG 238 (449)
T ss_pred ccceeeeEeeccccchhhhhhhHHHhhhhhhhhccC-CCcccc
Confidence 599999999988999999999999999999999986 777743
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-20 Score=220.23 Aligned_cols=166 Identities=29% Similarity=0.363 Sum_probs=126.5
Q ss_pred HHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 616 a~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
+.+++|||+-||||||+||+|.||+.-|. +|+.|||+++......... .... +..+...+.
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGh--iKlTDfgLsk~GLms~atn---l~eg-----~I~k~t~Ef--------- 213 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGH--IKLTDFGLSKKGLMSLATN---LKEG-----HIEKDTHEF--------- 213 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeeccc--ccccchhhhhhhhhhccch---hhhc-----chHHHHHHh---------
Confidence 78999999999999999999999987665 8999999998754322110 0000 011111111
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccccc---ccCCCHHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF---LVEHIPEAVD 772 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~---~~~~~~e~~d 772 (934)
.-..+||||.|+|||++....|++.+|+|++|+|+||.+-|..++|++..+.....+....... .....+|+++
T Consensus 214 ---~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~d 290 (1205)
T KOG0606|consen 214 ---QDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQD 290 (1205)
T ss_pred ---hhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHH
Confidence 1122589999999999999999999999999999999999988888887777654443332222 2344689999
Q ss_pred HHHHcccCCCCCC---cCHHHHHcCCCCCCccch
Q 002343 773 LFTRLLDPNPDLR---PKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 773 LI~~~L~~DP~~R---PTa~evL~HPff~~~~~~ 803 (934)
+|.++|+.+|..| +.+-++.+|+||...++.
T Consensus 291 li~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 291 LIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred HHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 9999999999999 467789999999888876
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-20 Score=223.38 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=173.0
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+...+.||.+.|=+|.++...+|. |+||++.+... .+.++|++ ...++|||++.+.-+...+...|||=
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik--~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK--FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH--HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 4666789999999999998888887 99999977653 34455655 56678999999988877777778887
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
+|...+|.|-+. ..-| +..-+.+.|+.|++.||.-+|..|
T Consensus 101 qyvkhnLyDRlS-----TRPF-----------------------------------L~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 101 QYVKHNLYDRLS-----TRPF-----------------------------------LVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred HHHhhhhhhhhc-----cchH-----------------------------------HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 766555555441 1111 233466789999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+|+|||.+||||+.=+ + +.|+||.--|..--.. .+..++ ..|+.+..--
T Consensus 141 VcHGDIKsENILiTSWN-W-~~LtDFAsFKPtYLPe---------------------------DNPadf-~fFFDTSrRR 190 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWN-W-LYLTDFASFKPTYLPE---------------------------DNPADF-TFFFDTSRRR 190 (1431)
T ss_pred ccccccccceEEEeeec-h-hhhhcccccCCccCCC---------------------------CCcccc-eEEEecCCce
Confidence 99999999999997533 3 6899997554321100 001112 2334444445
Q ss_pred CccccchhcccC-----------CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcc--cccc--cCCCHHHH
Q 002343 707 SGWQAPEQLLQG-----------RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK--DLFL--VEHIPEAV 771 (934)
Q Consensus 707 ~~Y~APE~l~~~-----------~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~--~~~~--~~~~~e~~ 771 (934)
..|+|||.+... ..+++-||||+||+++||++-|.|+|.-..-- ....+.. .... .-.....+
T Consensus 191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~--aYr~~~~~~~e~~Le~Ied~~~R 268 (1431)
T KOG1240|consen 191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL--AYRSGNADDPEQLLEKIEDVSLR 268 (1431)
T ss_pred eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--hHhccCccCHHHHHHhCcCccHH
Confidence 579999988642 15789999999999999999989998642111 1111100 0000 01124689
Q ss_pred HHHHHcccCCCCCCcCHHHHHcC
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+||..|++.||.+|.+|++.|+.
T Consensus 269 nlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 269 NLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHHccCchhccCHHHHHHh
Confidence 99999999999999999999986
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.9e-19 Score=182.71 Aligned_cols=137 Identities=18% Similarity=0.081 Sum_probs=96.6
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCCh---h--------------------------HHHHHHHHHHHhCCCCc
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---D--------------------------VALKEIQNLIASDQHPN 528 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~--------------------------~~~~Ei~~ll~~l~HpN 528 (934)
...||+|+||+||++...+|+.||||++..... . ...+|++ .+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMR-NLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHH-HHHHHHHCC
Confidence 457999999999999766899999999865321 0 1123554 455555555
Q ss_pred eeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHH
Q 002343 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (934)
Q Consensus 529 IV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 608 (934)
+......... ..+||||||+++....... ...+++..++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~---------------------------------------~~~~~~~~~~ 119 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRL---------------------------------------KDAPLSESKA 119 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhh---------------------------------------hcCCCCHHHH
Confidence 5332222222 2389999888642111100 1234677889
Q ss_pred HHHHHHHHHHHHHH-HHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 609 LKVTRDIVSGLSHL-HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 609 ~~i~~qIa~gL~yL-Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
+.++.|++.+|+|| |+.||+||||||+|||++. + .++|+|||+|....
T Consensus 120 ~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~--~v~LiDFG~a~~~~ 168 (190)
T cd05147 120 RELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-G--KLYIIDVSQSVEHD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-C--cEEEEEccccccCC
Confidence 99999999999999 6999999999999999973 3 48999999997543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.6e-19 Score=184.45 Aligned_cols=136 Identities=14% Similarity=0.099 Sum_probs=103.7
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hH----------HHHHHHHHHHhCCCCceeEEEEEEe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DV----------ALKEIQNLIASDQHPNIVRWYGVES 537 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~----------~~~Ei~~ll~~l~HpNIV~l~g~~~ 537 (934)
.+.++|...+.||.|+||.||+... +++.+|||.+..... +. ..+|++ .+..+.||+|....+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~-~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIV-QTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHH-HHHHHHHCCCCcceEeee
Confidence 4567899999999999999999655 677899999964432 11 234443 567779999999998866
Q ss_pred cC--------CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHH
Q 002343 538 DQ--------DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (934)
Q Consensus 538 ~~--------~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 608 (934)
.. +..+|+||||+| +|.++.. +++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------------------------------------------~~~--- 138 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE--------------------------------------------ISE--- 138 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh--------------------------------------------ccH---
Confidence 43 358999998876 4433310 011
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccc
Q 002343 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (934)
Q Consensus 609 ~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l 658 (934)
..+.+++.+|..||+.||+||||||+||+++.++ ++|+|||.++..
T Consensus 139 -~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g---i~liDfg~~~~~ 184 (232)
T PRK10359 139 -DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG---LRIIDLSGKRCT 184 (232)
T ss_pred -HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC---EEEEECCCcccc
Confidence 2355899999999999999999999999997765 899999988654
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-18 Score=177.44 Aligned_cols=138 Identities=20% Similarity=0.153 Sum_probs=100.7
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCChh-----------------------------HHHHHHHHHHHhCCCCc
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----------------------------VALKEIQNLIASDQHPN 528 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-----------------------------~~~~Ei~~ll~~l~HpN 528 (934)
...||+|++|.||++...+|+.||||++...... ...+|.. .+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFR-NLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHH-HHHHHHhCC
Confidence 4579999999999997668999999998754210 0123444 566677888
Q ss_pred eeEEEEEEecCCeEEEEEecccCC-hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHH
Q 002343 529 IVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607 (934)
Q Consensus 529 IV~l~g~~~~~~~~yLVmE~c~~s-L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 607 (934)
|.....+.... .|||||||++. +.... + ....++..+
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~----------l------------------------------~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPR----------L------------------------------KDVPLEEEE 118 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhh----------h------------------------------hhccCCHHH
Confidence 75444433332 48999988764 11110 0 122345677
Q ss_pred HHHHHHHHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccCC
Q 002343 608 LLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661 (934)
Q Consensus 608 i~~i~~qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~ 661 (934)
+..++.|++.+|.+||+ .||+||||||+|||++ ++ .++|+|||+|+.+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~--~~~liDFG~a~~~~~~ 170 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG--KPYIIDVSQAVELDHP 170 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC--CEEEEEcccceecCCC
Confidence 88999999999999999 9999999999999997 44 4899999999887653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=175.43 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=96.1
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecC---ChhHHHHHHHHHHHhC-----CCCceeEEEEEEecCC---eEE-EE
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT---HHDVALKEIQNLIASD-----QHPNIVRWYGVESDQD---FVY-LS 545 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~---~~~~~~~Ei~~ll~~l-----~HpNIV~l~g~~~~~~---~~y-LV 545 (934)
.+.||+|+||.||. +..++.. +||++... ..+...+|+. ++..+ .||||+++||+++++. .++ +|
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~-~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELK-YYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHH-HHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 45899999999996 4444444 79988654 2345677877 55555 6899999999999873 444 78
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH-HHHHH
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL-SHLHE 624 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL-~yLHs 624 (934)
||||+ ..+|+|.+++.+ ..+++. ..++.|++.++ +|||+
T Consensus 84 ~e~~G--------~~~~tL~~~l~~------------------------------~~~~e~--~~~~~~~L~~l~~yLh~ 123 (210)
T PRK10345 84 ADFDG--------KPSITLTEFAEQ------------------------------CRYEED--VAQLRQLLKKLKRYLLD 123 (210)
T ss_pred ecCCC--------CcchhHHHHHHc------------------------------ccccHh--HHHHHHHHHHHHHHHHH
Confidence 99754 112334333321 112333 35678888888 99999
Q ss_pred CCCcccCCCCCeEEEecC--CCceEEEeeccccccc
Q 002343 625 IGLIHRDLKPQNVLISKD--KSFCAKLSDMGISKRL 658 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d--~~~~vKLsDFGlAk~l 658 (934)
++||||||||+|||++.. +...++|+||+.++.+
T Consensus 124 ~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 124 NRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred CCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 999999999999999743 3346999995544443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-17 Score=170.27 Aligned_cols=193 Identities=18% Similarity=0.136 Sum_probs=129.4
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCCh--h-----HHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEEecc
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--D-----VALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~-----~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
...|++|+||+|+++.. .++.++.+.+..... . .+.+|++ +++.+ +|++|++++++ +..|++|||+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~-iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREAL-ALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHH-HHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 56899999999998665 788888887754332 1 3456776 55666 56889999886 4479999965
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.| .+|.+.+. . ....++.|++.+|+++|++||||
T Consensus 81 ~G----------~~L~~~~~-----------------------------------~-~~~~~~~qi~~~L~~lH~~GIvH 114 (218)
T PRK12274 81 AG----------AAMYQRPP-----------------------------------R-GDLAYFRAARRLLQQLHRCGVAH 114 (218)
T ss_pred cC----------ccHHhhhh-----------------------------------h-hhHHHHHHHHHHHHHHHHCcCcc
Confidence 54 33322110 0 01346789999999999999999
Q ss_pred cCC-CCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHH-HHHHhhhhhhccccccccceeecCCCCC
Q 002343 630 RDL-KPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYL-VSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 630 RDL-KP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
||| ||+|||++.++. ++|+|||+|.......... .++ ....... . . ++ ...++
T Consensus 115 rDL~kp~NILv~~~g~--i~LIDFG~A~~~~~~~~~~-----------r~L~~rDl~~l------l---k-~~--~~y~~ 169 (218)
T PRK12274 115 NDLAKEANWLVQEDGS--PAVIDFQLAVRGNPRARWM-----------RLLAREDLRHL------L---K-HK--RMYCP 169 (218)
T ss_pred CCCCCcceEEEcCCCC--EEEEECCCceecCCcchHH-----------HHHHHHHHHHH------H---H-HH--HhcCC
Confidence 999 799999976664 8999999998544321100 000 0000000 0 0 00 23678
Q ss_pred ccccchhcccC-CCc-ccccccchhhhhHHhhcCCCCCCCCc
Q 002343 708 GWQAPEQLLQG-RQT-RAIDLFSLGCILFFCITGGKHPYGES 747 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t-~ksDIWSLGvILyeLltGg~~Pf~~~ 747 (934)
.|++|+.-.-- ..+ .+.++++-|+-+|.++|++-+.|++.
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 170 AALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred CCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 89999865322 223 56788899999999999877777653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=180.89 Aligned_cols=235 Identities=25% Similarity=0.265 Sum_probs=137.7
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh-----HHHHHHHHHHHhCC----------CCceeEEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQ----------HPNIVRWYGVES 537 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~----------HpNIV~l~g~~~ 537 (934)
.++..+.||.|+++.||.+.. .+|+.+|||.+.-.... ..++|......... |-.++--++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456678999999999999844 56999999988643321 12222221111111 212222222211
Q ss_pred ---------cC---C-----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhh
Q 002343 538 ---------DQ---D-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600 (934)
Q Consensus 538 ---------~~---~-----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (934)
.. . ..+++|+...++|.+++.. |.......
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~--------l~~~~~~~------------------------- 139 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEA--------LFSRAQTH------------------------- 139 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHH--------HHHHTTTS-------------------------
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHH--------Hhhccccc-------------------------
Confidence 11 1 2477888888888777632 22111110
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHH
Q 002343 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680 (934)
Q Consensus 601 ~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~ 680 (934)
.++.....+.+..|+++.+++||+.||||+||||+|+|++.+|. ++|+||+...........
T Consensus 140 ~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~--v~Lg~F~~~~r~g~~~~~---------------- 201 (288)
T PF14531_consen 140 SPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGG--VFLGDFSSLVRAGTRYRC---------------- 201 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS---EEE--GGGEEETTEEEEG----------------
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCC--EEEcChHHHeecCceeec----------------
Confidence 00112234567799999999999999999999999999988775 899999876653321110
Q ss_pred HHHhhhhhhccccccccceeecCCCCCccccchhcccC--------CCcccccccchhhhhHHhhcCCCCCCCCchhHHH
Q 002343 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG--------RQTRAIDLFSLGCILFFCITGGKHPYGESFERDA 752 (934)
Q Consensus 681 ~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~--------~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~ 752 (934)
...+..|.+||..... .+|.+.|.|+||+++|.+.++ ..||+.......
T Consensus 202 ----------------------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~-~lPf~~~~~~~~ 258 (288)
T PF14531_consen 202 ----------------------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG-RLPFGLSSPEAD 258 (288)
T ss_dssp ----------------------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS-S-STCCCGGGST
T ss_pred ----------------------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc-cCCCCCCCcccc
Confidence 1245679999987542 468999999999999999996 788875432211
Q ss_pred HHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 753 NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 753 ~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.... ... ..+.++.+++||..||++||.+|
T Consensus 259 ~~~~-f~~--C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 259 PEWD-FSR--CRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SGGG-GTT--SS---HHHHHHHHHHT-SSGGGS
T ss_pred cccc-chh--cCCcCHHHHHHHHHHccCCcccC
Confidence 1100 001 11445678999999999999988
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-17 Score=172.77 Aligned_cols=235 Identities=20% Similarity=0.291 Sum_probs=168.9
Q ss_pred EeeeecccCcEEEEEEEEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
+..+|.+...|..|+ +.++|..+++|++.-... ...+.|+---++...||||+.++|.|.....+.++..
T Consensus 194 l~tkl~e~hsgelwr-grwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq----- 267 (448)
T KOG0195|consen 194 LITKLAESHSGELWR-GRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ----- 267 (448)
T ss_pred hhhhhccCCCccccc-ccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee-----
Confidence 345688888999998 677888888888753322 1223333335667789999999999999999999999
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC--Cccc
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHR 630 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g--IVHR 630 (934)
||+.|+|...|++.... -....+..+++.+|++|++|||+.. |---
T Consensus 268 -----~mp~gslynvlhe~t~v---------------------------vvd~sqav~faldiargmaflhslep~ipr~ 315 (448)
T KOG0195|consen 268 -----YMPFGSLYNVLHEQTSV---------------------------VVDHSQAVRFALDIARGMAFLHSLEPMIPRF 315 (448)
T ss_pred -----eccchHHHHHHhcCccE---------------------------EEecchHHHHHHHHHhhHHHHhhcchhhhhh
Confidence 88889999888753211 1234578899999999999999874 4444
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
-|....++|+++-..++-.+|--++-.- . | ..-.|.||
T Consensus 316 ~lns~hvmidedltarismad~kfsfqe-----------~-------------------------g------r~y~pawm 353 (448)
T KOG0195|consen 316 YLNSKHVMIDEDLTARISMADTKFSFQE-----------V-------------------------G------RAYSPAWM 353 (448)
T ss_pred hcccceEEecchhhhheecccceeeeec-----------c-------------------------c------cccCcccC
Confidence 6888899996554322223332222110 0 0 12367899
Q ss_pred cchhcccCCC---cccccccchhhhhHHhhcCCCCCCCCchhHH--HHH-HhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 711 APEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHPYGESFERD--ANI-VKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 711 APE~l~~~~~---t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i-~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+||.+...+- -.++|+|||.+++||+.| +..||.+..... +.+ +.......++..++.+..|+.-|++.||.+
T Consensus 354 spealqrkped~n~raadmwsfaillwel~t-revpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgk 432 (448)
T KOG0195|consen 354 SPEALQRKPEDLNIRAADMWSFAILLWELNT-REVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGK 432 (448)
T ss_pred CHHHHhcCchhcchhhhhHHHHHHHHHHhhc-cccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCc
Confidence 9999987654 358999999999999999 588988754332 222 233344556777889999999999999999
Q ss_pred CcCHHHHH
Q 002343 785 RPKAQNVL 792 (934)
Q Consensus 785 RPTa~evL 792 (934)
||.++.+.
T Consensus 433 rpkfdmiv 440 (448)
T KOG0195|consen 433 RPKFDMIV 440 (448)
T ss_pred CCCcceeh
Confidence 99987654
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-17 Score=187.43 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=160.1
Q ss_pred EeeeecccCcEEEEEEEEec----CcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEE------EEEe-----c
Q 002343 477 FNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWY------GVES-----D 538 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~------g~~~-----~ 538 (934)
+.+..+..++|.+....... ...++.|+..... .....+++..+.....|++.+..= .... .
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~ 327 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGK 327 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccc
Confidence 34456666666665432222 2344445443322 123455555444444555544332 0111 1
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..++||.|++|.. ++|.+||..+.. ....+...++.++.|++.|
T Consensus 328 ~~~lyI~Mn~c~~----------~tledWl~rr~~--------------------------~e~~s~s~~~~~~~q~~~~ 371 (516)
T KOG1033|consen 328 KVYLYIQMNLCEK----------ETLEDWLRRRRT--------------------------GEERSLSLMLDIFKQIAPA 371 (516)
T ss_pred ccchhhhhhhhhh----------hhHHHHhhCCCc--------------------------ccccchhHHHHHHHhhccc
Confidence 3368999998873 344455532211 1123456788999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
++| ++.+|||+||.||....+. .+||.|||+............. ..
T Consensus 372 ~~y---k~~ihrdlkp~nif~~~d~--q~kIgDFgl~ts~~~~~~~~~~-----------------------------~a 417 (516)
T KOG1033|consen 372 VEY---KGLIHRDLKPSNIFFSDDD--QLKIGDFGLVTSQDKDETVAPA-----------------------------AA 417 (516)
T ss_pred hhh---ccchhhhccccccccccch--hhhhhhhhheeecccCCcccch-----------------------------hh
Confidence 999 9999999999999997766 4899999998876654411000 00
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccc---cCCCHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL---VEHIPEAVDLFT 775 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~---~~~~~e~~dLI~ 775 (934)
-.|..+||..||+||++.+..|+.++||||||+||+|++. +|....++....-..+....+ ....|+..+|+.
T Consensus 418 ~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~----~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~ 493 (516)
T KOG1033|consen 418 SHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI----QFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQ 493 (516)
T ss_pred hhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH----HhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHH
Confidence 1233679999999999999999999999999999999987 455544444332222222222 223467889999
Q ss_pred HcccCCCCCCcCHHHHHcCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff 797 (934)
+||.+.|.+||++.+.--|+|.
T Consensus 494 ~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 494 QLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred HhcCCCcccCchHHHHhhhhhc
Confidence 9999999999988888888764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4e-16 Score=190.48 Aligned_cols=199 Identities=23% Similarity=0.262 Sum_probs=147.3
Q ss_pred cCceeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhH--HHHHHHHHHHhCC---CCceeEEEEEEecCC
Q 002343 466 VDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV--ALKEIQNLIASDQ---HPNIVRWYGVESDQD 540 (934)
Q Consensus 466 ~~~~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~--~~~Ei~~ll~~l~---HpNIV~l~g~~~~~~ 540 (934)
.+-..-+..|.+.++||+|+||+||.|...+|+.||+|+=+....-+ .-.+ ++.+++ -+-|+.+..++.-.+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q---~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQ---VMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHH---HHHhhchhhhcchHHHHHHHccCC
Confidence 33355667899999999999999999987779999999865543211 0111 122222 244555666666677
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.-+||+| |.+.|+|.+.++. ...+++..+..+..|++.-++
T Consensus 768 ~S~lv~e----------y~~~Gtlld~~N~-----------------------------~~~m~e~lv~~~~~qml~ive 808 (974)
T KOG1166|consen 768 ASVLVSE----------YSPYGTLLDLINT-----------------------------NKVMDEYLVMFFSCQMLRIVE 808 (974)
T ss_pred cceeeee----------ccccccHHHhhcc-----------------------------CCCCCchhhhHHHHHHHHHHH
Confidence 8899999 5555555555431 234567778899999999999
Q ss_pred HHHHCCCcccCCCCCeEEEec-----CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 621 HLHEIGLIHRDLKPQNVLISK-----DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~-----d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
+||..+|||+||||+|.||.. .+...++|+|||.|-.+..-..
T Consensus 809 ~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~-------------------------------- 856 (974)
T KOG1166|consen 809 HLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPD-------------------------------- 856 (974)
T ss_pred HHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCC--------------------------------
Confidence 999999999999999999952 2234589999998865432111
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcC
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 739 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltG 739 (934)
| -.+...++|-++-.+|+..++.++..+|.|.|..+++-||.|
T Consensus 857 ~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 857 G-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred C-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 1 013336789999999999999999999999999999999997
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=9e-16 Score=176.47 Aligned_cols=197 Identities=25% Similarity=0.332 Sum_probs=142.9
Q ss_pred HhCCCCceeEEEEEEecCCeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhh
Q 002343 522 ASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600 (934)
Q Consensus 522 ~~l~HpNIV~l~g~~~~~~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (934)
+.+.|.|+.+++|.+.++...++|.+||. |+|.|.++...
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--------------------------------------- 42 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--------------------------------------- 42 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc---------------------------------------
Confidence 46789999999999999999999999998 57777775311
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHH
Q 002343 601 NGHPSAQLLKVTRDIVSGLSHLHEIGL-IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYL 679 (934)
Q Consensus 601 ~~l~~~~i~~i~~qIa~gL~yLHs~gI-VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~ 679 (934)
..+++--...++++|+.||+|||+..| .|+-|++.|+++ |..+.+||+|||+...............
T Consensus 43 ~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv--d~~w~lklt~~Gl~~~~~~~~~~~~~~~---------- 110 (484)
T KOG1023|consen 43 IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV--DSRWVLKLTDFGLNSLLEETAEPEAHHP---------- 110 (484)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee--eeeEEEEechhhhcccccccccccccch----------
Confidence 122334456889999999999998776 999999999999 6667899999999877643100000000
Q ss_pred HHHHhhhhhhccccccccceeecCCCCCccccchhcccCC-------CcccccccchhhhhHHhhcCCCCCCCCchh---
Q 002343 680 VSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR-------QTRAIDLFSLGCILFFCITGGKHPYGESFE--- 749 (934)
Q Consensus 680 ~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~-------~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--- 749 (934)
..-..-|.|||.+.... .+.+.||||||++++|+++ +..||.....
T Consensus 111 -----------------------~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~-r~~~~~~~~~~~~ 166 (484)
T KOG1023|consen 111 -----------------------IRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF-RSGPFDLRNLVED 166 (484)
T ss_pred -----------------------hHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh-ccCccccccccCC
Confidence 01234699999997641 3678999999999999999 5778865221
Q ss_pred --HHHHHHhh-ccccccc------CCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 750 --RDANIVKD-RKDLFLV------EHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 750 --~~~~i~~~-~~~~~~~------~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
+....++. ....+.+ +..++...++..||..+|.+||+++++-.
T Consensus 167 ~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 167 PDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred hHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 12222222 2211111 33457889999999999999999998753
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-15 Score=161.65 Aligned_cols=141 Identities=21% Similarity=0.154 Sum_probs=99.2
Q ss_pred cceEEEeeeecccCcEEEEEEE--EecCcEEEEEEeecCCh---------------------------hHHHHHHHHHHH
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG--NYEGRSVAVKRLVKTHH---------------------------DVALKEIQNLIA 522 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~--~~~g~~VAVK~l~~~~~---------------------------~~~~~Ei~~ll~ 522 (934)
|..|.+.+.||+|+||.||++. ..+|+.||||++..... ....+|+. ++.
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~L~ 105 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR-NLQ 105 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH-HHH
Confidence 4457778899999999999986 57899999999864321 01234555 444
Q ss_pred hCCC--CceeEEEEEEecCCeEEEEEecccCC-hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhh
Q 002343 523 SDQH--PNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599 (934)
Q Consensus 523 ~l~H--pNIV~l~g~~~~~~~~yLVmE~c~~s-L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (934)
.+.+ ..+.++++. ...|||||++++. |.... ..
T Consensus 106 ~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~-~~--------------------------------------- 141 (237)
T smart00090 106 RLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR-LK--------------------------------------- 141 (237)
T ss_pred HHHhcCCCCCeeeEe----cCceEEEEEecCCcccccc-cc---------------------------------------
Confidence 4443 334455543 2348999988763 32221 00
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCeEEEecCCCceEEEeeccccccccC
Q 002343 600 ANGHPSAQLLKVTRDIVSGLSHLHEIG-LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 600 ~~~l~~~~i~~i~~qIa~gL~yLHs~g-IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
...+...++..++.||+.+|++||++| |+||||||+|||++ ++ .++|+|||+|.....
T Consensus 142 ~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~--~i~LiDFg~a~~~~~ 200 (237)
T smart00090 142 DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DG--KVVIIDVSQSVELDH 200 (237)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CC--CEEEEEChhhhccCC
Confidence 112234456789999999999999999 99999999999997 43 489999999986544
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-16 Score=190.66 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=179.9
Q ss_pred EEEeeeecccCcEEEEEEEE--ecCcEEEEEEeecCC-h----hHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEE
Q 002343 475 VVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTH-H----DVALKEIQNLIASDQ-HPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~--~~g~~VAVK~l~~~~-~----~~~~~Ei~~ll~~l~-HpNIV~l~g~~~~~~~~yLVm 546 (934)
|.+.+.||+|+|+.|-.... .....+|+|.+.... . +....|.. +...+. |+|++++++...+.++.++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~-~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETD-IQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccc-ccccccccccccccCCccCCCccccccc
Confidence 44566799999999987644 334567888775443 1 11222333 444444 999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH-HC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-EI 625 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH-s~ 625 (934)
|+..+ |++.+.+... ...+.+......++.|+..|+.|+| +.
T Consensus 101 ~~s~g----------~~~f~~i~~~---------------------------~~~~~~~~~~~~~~~ql~s~l~~~H~~~ 143 (601)
T KOG0590|consen 101 SYSDG----------GSLFSKISHP---------------------------DSTGTSSSSASRYLPQLNSGLSYLHPEN 143 (601)
T ss_pred Ccccc----------cccccccccC---------------------------CccCCCCcchhhhhhhhccCccccCccc
Confidence 96443 3333222000 0113455667789999999999999 99
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccC-CCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG-DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++.||||||+|.+++..+. ..|++|||+|..+.. ....... ...+
T Consensus 144 ~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~~~~g~~~~~---------------------------------~~~~ 189 (601)
T KOG0590|consen 144 GVTHRDIKPSNSLLDESGS-ALKIADFGLATAYRNKNGAERSL---------------------------------KDRC 189 (601)
T ss_pred ccccCCCCCccchhccCCC-cccCCCchhhccccccCCcceee---------------------------------eccc
Confidence 9999999999999976662 589999999987765 2221111 1146
Q ss_pred C-CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHH---HHHhhc---ccccccCCCHHHHHHHHH
Q 002343 705 G-SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVKDR---KDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 705 G-T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~---~i~~~~---~~~~~~~~~~e~~dLI~~ 776 (934)
| ++.|+|||...+..| .+..|+||+|+++.-+++| ..|+........ ...... ....+......+.+++.+
T Consensus 190 g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k 268 (601)
T KOG0590|consen 190 GSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG-ELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHK 268 (601)
T ss_pred CCCCCCCCcccccchhhcCCCcccccccccccccccC-CCCccccccccccceeecccccccccCccccCChhhhhcccc
Confidence 8 999999999988544 7889999999999999996 556544322221 111111 123344556789999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~ 799 (934)
++..+|..|.+.+++-.+||+..
T Consensus 269 ~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 269 ILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccCCchhccccccccccccccc
Confidence 99999999999999999999977
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=151.94 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=98.5
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.||+|++|.||++.. .|..|+||+...... ....+|+. ++..+.|+||.....++.+.+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREAR-IMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHH-HHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 4799999999999754 788999998653221 12334554 6677788888877777777788899999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|++| ++|.+++... .. ....++.+++.+|.+||+.++
T Consensus 80 ~~~G----------~~L~~~~~~~--------------------------------~~-~~~~i~~~i~~~l~~lH~~~i 116 (211)
T PRK14879 80 YIEG----------EPLKDLINSN--------------------------------GM-EELELSREIGRLVGKLHSAGI 116 (211)
T ss_pred EeCC----------cCHHHHHHhc--------------------------------cH-HHHHHHHHHHHHHHHHHhCCc
Confidence 6654 3333332210 11 567889999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
+|||++|+|||++ ++ .++|+|||+++.
T Consensus 117 ~H~Dl~p~Nil~~-~~--~~~liDf~~a~~ 143 (211)
T PRK14879 117 IHGDLTTSNMILS-GG--KIYLIDFGLAEF 143 (211)
T ss_pred ccCCCCcccEEEE-CC--CEEEEECCcccC
Confidence 9999999999997 33 489999999875
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.8e-15 Score=152.73 Aligned_cols=135 Identities=17% Similarity=0.121 Sum_probs=96.4
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-------------------------hHHHHHHHHHHHhCCCC-
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-------------------------DVALKEIQNLIASDQHP- 527 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-------------------------~~~~~Ei~~ll~~l~Hp- 527 (934)
.|.+.+.||+|+||.||++...+|+.||||++..... ....+|+. ++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFA-ALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHH-HHHHHHHcC
Confidence 3666789999999999998777899999998754320 01234444 44555666
Q ss_pred -ceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHH
Q 002343 528 -NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (934)
Q Consensus 528 -NIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 606 (934)
.+.+.++. ...++|||+|++ ++|..... ..
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g----------~~L~~~~~-----------------------------------~~ 125 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDG----------VELYRVRV-----------------------------------LE 125 (198)
T ss_pred CCCCceeec----CCceEEEEEeCC----------cchhhccc-----------------------------------cc
Confidence 44555542 345899997765 22221100 01
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccC
Q 002343 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 607 ~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
....++.+++.++.++|+.||+||||||+||+++.++ .++|+|||+|..+..
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~--~~~liDfg~~~~~~~ 177 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE--KIYIIDWPQMVSTDH 177 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC--cEEEEECCccccCCC
Confidence 2457888999999999999999999999999997655 489999999976654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-14 Score=172.58 Aligned_cols=134 Identities=19% Similarity=0.292 Sum_probs=98.9
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC-h----------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-H----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-~----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
.|...+.||+|+||+||++. ..++.+++|+..... . +...+|+. ++..++|+||+..+.++.+....
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~-~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGE-YLGRDAVIKERVPKGYRHPELDERLRTERTRAEAR-LLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEe-ecCccceeEEEecccccchhHHHHHHHHHHHHHHH-HHHhhcccCCCeeEEEEEeCCCC
Confidence 34556889999999999954 445555555432211 0 12334554 77888999999888888777788
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
++|||||+ +++|.+++. ....++.|++.+|.||
T Consensus 412 ~lv~E~~~----------g~~L~~~l~-------------------------------------~~~~~~~~i~~~L~~l 444 (535)
T PRK09605 412 TIVMEYIG----------GKDLKDVLE-------------------------------------GNPELVRKVGEIVAKL 444 (535)
T ss_pred EEEEEecC----------CCcHHHHHH-------------------------------------HHHHHHHHHHHHHHHH
Confidence 99999554 445544332 1356889999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
|+.||+||||||+|||++ ++ .++|+|||+|+...
T Consensus 445 H~~giiHrDlkp~NILl~-~~--~~~liDFGla~~~~ 478 (535)
T PRK09605 445 HKAGIVHGDLTTSNFIVR-DD--RLYLIDFGLGKYSD 478 (535)
T ss_pred HhCCCccCCCChHHEEEE-CC--cEEEEeCcccccCC
Confidence 999999999999999993 33 48999999998753
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-14 Score=148.38 Aligned_cols=128 Identities=21% Similarity=0.319 Sum_probs=92.1
Q ss_pred eecccCcEEEEEEEEecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.||+|+||+||++. .+|+.|++|+...... ....+|+. ++..+.|+++.....++.+.+..++|||+
T Consensus 1 ~ig~G~~~~vy~~~-~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGD-FLGLKAVIKERVPKSYRHPELDERIRRERTRNEAR-LLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEee-cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHH-HHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 48999999999975 6789999998653211 12234554 66667777655444444556677999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|++ ++|.+++... . ..++.|++.+|.+||+.|++
T Consensus 79 ~~g----------~~l~~~~~~~-----------------------------------~-~~~~~~i~~~l~~lH~~gi~ 112 (199)
T TIGR03724 79 IEG----------KPLKDVIEEG-----------------------------------N-DELLREIGRLVGKLHKAGIV 112 (199)
T ss_pred ECC----------ccHHHHHhhc-----------------------------------H-HHHHHHHHHHHHHHHHCCee
Confidence 653 3443332110 0 06788999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l 658 (934)
|||+||+|||++ ++ .++++|||+++..
T Consensus 113 H~Dl~~~Nil~~-~~--~~~liDfg~a~~~ 139 (199)
T TIGR03724 113 HGDLTTSNIIVR-DD--KLYLIDFGLGKYS 139 (199)
T ss_pred cCCCCcceEEEE-CC--cEEEEECCCCcCC
Confidence 999999999997 43 4899999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=4e-14 Score=145.45 Aligned_cols=136 Identities=19% Similarity=0.158 Sum_probs=90.0
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCChh-----HH----------------------HHHHHHHHHhCC-CCce
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----VA----------------------LKEIQNLIASDQ-HPNI 529 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-----~~----------------------~~Ei~~ll~~l~-HpNI 529 (934)
.+.||+|+||+||++...+|+.||||++...... .. ..|...+..... +-.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999987668999999998653211 00 122222222111 1234
Q ss_pred eEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHH
Q 002343 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (934)
Q Consensus 530 V~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 609 (934)
.+.+++ ...++|||++++.-... ..+.+.. . ..++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~-----~~l~~~~----------------------------------~-~~~~~ 117 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPA-----PRLKDVR----------------------------------L-LEDPE 117 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccC-----hhhhhhh----------------------------------h-cccHH
Confidence 555543 23589999777521000 0111100 0 03567
Q ss_pred HHHHHHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccC
Q 002343 610 KVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 610 ~i~~qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
.++.+++.++.++|. ++|+||||||+||+++ ++ .++|+|||.|.....
T Consensus 118 ~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~--~~~liDfg~a~~~~~ 166 (187)
T cd05119 118 ELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG--KVYIIDVPQAVEIDH 166 (187)
T ss_pred HHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC--cEEEEECcccccccC
Confidence 899999999999999 9999999999999997 44 489999999976554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-14 Score=163.86 Aligned_cols=255 Identities=25% Similarity=0.276 Sum_probs=184.1
Q ss_pred ceEEEeeeecc--cCcEEEEEEEE---ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAK--GSNGTVVLEGN---YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~--GsfGtVy~~~~---~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+...+.+|. |.+|.||.+.. .++..+|+|+=.... .....+|+........|+|.|+.+..++..+.+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34556778999 99999999744 568899999732211 123455665455566799999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH----H
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS----G 618 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~----g 618 (934)
|+-+|+|..+|..+.... ..-+|...++.++.+... |
T Consensus 194 fiqtE~~~~sl~~~~~~~---------------------------------------~~~~p~~~l~~~~~~~~~~~~~a 234 (524)
T KOG0601|consen 194 FIQTELCGESLQSYCHTP---------------------------------------CNFLPDNLLWNSLRDWLSRDVTA 234 (524)
T ss_pred eeeeccccchhHHhhhcc---------------------------------------cccCCchhhhhHHhhhhhccccc
Confidence 999999997777766321 122466677888888888 9
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|.++|+.+|+|-|+||.||++..+. ..+++.|||+...+....-.......
T Consensus 235 l~~~hs~~~~~~~~kp~~i~~~~~~-~s~~~~df~~v~~i~~~~~~~~~~~~---------------------------- 285 (524)
T KOG0601|consen 235 LSHLHSNNIVHDDLKPANIFTTSDW-TSCKLTDFGLVSKISDGNFSSVFKVS---------------------------- 285 (524)
T ss_pred ccccCCCcccccccchhheeccccc-ceeecCCcceeEEccCCccccceeee----------------------------
Confidence 9999999999999999999998774 35899999999888765422111100
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhh-cccccccCCCHHHHHHHHHc
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD-RKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~-~~~~~~~~~~~e~~dLI~~~ 777 (934)
....|...|++||++. +.++.+.||||+|.++.+..++-.+|-......-..+-.. .+..+....+.+....+..|
T Consensus 286 --~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~ 362 (524)
T KOG0601|consen 286 --KRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQM 362 (524)
T ss_pred --ecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHh
Confidence 0024677899999875 4789999999999999999997555543311111111111 11112222344666699999
Q ss_pred ccCCCCCCcCHHHHHcCCCCC
Q 002343 778 LDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~ 798 (934)
++.+|..|++++.+++|+++.
T Consensus 363 ~d~~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 363 LDEDPRLRLTAQILTALNVIH 383 (524)
T ss_pred cCcchhhhhHHHHHhcccccc
Confidence 999999999999999999985
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.4e-13 Score=144.74 Aligned_cols=132 Identities=17% Similarity=0.217 Sum_probs=91.0
Q ss_pred eeec-ccCcEEEEEEEEecCcEEEEEEeecCC----------------hhHHHHHHHHHHHhCCCCce--eEEEEEEecC
Q 002343 479 KEIA-KGSNGTVVLEGNYEGRSVAVKRLVKTH----------------HDVALKEIQNLIASDQHPNI--VRWYGVESDQ 539 (934)
Q Consensus 479 ~~IG-~GsfGtVy~~~~~~g~~VAVK~l~~~~----------------~~~~~~Ei~~ll~~l~HpNI--V~l~g~~~~~ 539 (934)
..|| .|+.|+||+... .+..+|||++.... .....+|+. ++..+.|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~-ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFR-LLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHH-HHHHHHhCCCCCceeEeeeeee
Confidence 4677 788888887543 47889999885321 123455665 7777787774 7777764432
Q ss_pred -Ce---EEEEEecccC--ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 540 -DF---VYLSLERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 540 -~~---~yLVmE~c~~--sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
.. .++|||++++ +|.+++ . ...++.. .+.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l-----------~------------------------------~~~l~~~----~~~ 149 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALL-----------Q------------------------------EAPLSEE----QWQ 149 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHH-----------h------------------------------cCCCCHH----HHH
Confidence 22 3599997764 343332 1 1112222 356
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
||+.+|.+||++||+||||||+|||++.++ .++|+|||.++...
T Consensus 150 ~i~~~l~~lH~~GI~HrDlkp~NILv~~~~--~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQLIARFHDAGVYHADLNAHNILLDPDG--KFWLIDFDRGELRT 193 (239)
T ss_pred HHHHHHHHHHHCCCCCCCCCchhEEEcCCC--CEEEEECCCcccCC
Confidence 899999999999999999999999997665 48999999987643
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-12 Score=125.22 Aligned_cols=132 Identities=17% Similarity=0.226 Sum_probs=98.9
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCC--CceeEEEEEEecCCeEEEEEecccCChh
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQH--PNIVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
.+.||+|.++.||++... +..++||....... ....+|+. ++..+.| .++++++++....+..|++||++.+.
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~~~~~~~e~~-~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~-- 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREKGADREREVA-ILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE-- 78 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCchhHHHHHHH-HHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe--
Confidence 467999999999997654 47899999865543 33455555 5555555 68999999988888999999976542
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccC
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI---GLIHRD 631 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~---gIVHRD 631 (934)
.+..+ +......++.+++.+|++||.. +++|+|
T Consensus 79 --------~~~~~------------------------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~D 114 (155)
T cd05120 79 --------TLDEV------------------------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGD 114 (155)
T ss_pred --------ecccC------------------------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecC
Confidence 11100 1233457788999999999985 699999
Q ss_pred CCCCeEEEecCCCceEEEeecccccccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
|||+|||++.++ .++++|||+++...
T Consensus 115 l~~~Nil~~~~~--~~~l~Df~~~~~~~ 140 (155)
T cd05120 115 LHPGNILVDDGK--ILGIIDWEYAGYGP 140 (155)
T ss_pred CCcceEEEECCc--EEEEEecccccCCC
Confidence 999999997643 58999999987543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.1e-12 Score=145.77 Aligned_cols=245 Identities=24% Similarity=0.205 Sum_probs=173.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE--ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~--~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..|.....||.|.|+.|+.... .++..+|+|.+.+... ...+.|+........|.++++++..+......||-
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP 344 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence 3456677899999999998643 3577899998865432 23456665455566799999999999888889999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
.|||.+...++-.. + ...+.+...+++..|++.++.++|+.
T Consensus 345 ~e~~~~~s~~l~~~--------~-------------------------------~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSV--------T-------------------------------SQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhhhcCcchhhhhH--------H-------------------------------HHhcCcchhhhhHHHHHhccccccch
Confidence 99887633222110 0 11234556788999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
.++|+|+||+||++..++ +..++.|||+++.+.-..... .-+
T Consensus 386 ~~~~~d~~psni~i~~~~-~~~~~~~~~~~t~~~~~~~~~-------------------------------------~~~ 427 (524)
T KOG0601|consen 386 LFVHLDVKPSNILISNDG-FFSKLGDFGCWTRLAFSSGVF-------------------------------------HHI 427 (524)
T ss_pred hhhcccccccceeeccch-hhhhccccccccccceecccc-------------------------------------ccc
Confidence 999999999999998765 457999999987532211000 112
Q ss_pred CCcc-ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGW-QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y-~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+..| .+++......+..++|++|||.-+.+.+++.. +.........+........+.. ..++..+.+.|+..++..
T Consensus 428 ~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~--ls~~~~~~~~i~~~~~p~~~~~-~~~~q~~~kv~~~~~~~~ 504 (524)
T KOG0601|consen 428 DRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP--LSESGVQSLTIRSGDTPNLPGL-KLQLQVLLKVMINPDRKR 504 (524)
T ss_pred ccccccchhhccccccccccccccccccccccccCcc--cCcccccceeeecccccCCCch-HHhhhhhhhhhcCCcccc
Confidence 3334 35666666778999999999999999999643 3333333333333333332222 268889999999999999
Q ss_pred CcCHHHHHcCCCC
Q 002343 785 RPKAQNVLNHPFF 797 (934)
Q Consensus 785 RPTa~evL~HPff 797 (934)
||.+.++..|+=|
T Consensus 505 ~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 505 RPSAVELSLHSEF 517 (524)
T ss_pred chhhhhhcccchh
Confidence 9999999988755
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.5e-11 Score=137.42 Aligned_cols=138 Identities=25% Similarity=0.237 Sum_probs=88.3
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCChhHH-----------------------------HH--------------
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-----------------------------LK-------------- 515 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~-----------------------------~~-------------- 515 (934)
+.||.|++|.||+|...+|+.||||+....-.+.. .+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 56999999999999989999999999864321111 01
Q ss_pred HHHH---HHHhCCCCceeEEEEEEe-cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhccccc
Q 002343 516 EIQN---LIASDQHPNIVRWYGVES-DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590 (934)
Q Consensus 516 Ei~~---ll~~l~HpNIV~l~g~~~-~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~ 590 (934)
|..+ +.....|.+-|.+-.++. .....+||||||+| +|.++....
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~------------------------------ 252 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD------------------------------ 252 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH------------------------------
Confidence 1111 112223333333333332 23457999998765 444433110
Q ss_pred chhhhHhhhhCCCCHHHHHHHHHHHHH-HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccC
Q 002343 591 NTKDIELWKANGHPSAQLLKVTRDIVS-GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 591 ~~~~~~~~~~~~l~~~~i~~i~~qIa~-gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
..+. ....++.+++. .+..+|..|++|+|+||.||++..++. ++++|||++..+..
T Consensus 253 ---------~~~~---~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~--i~liDfG~~~~l~~ 309 (437)
T TIGR01982 253 ---------EAGL---DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGK--IIALDFGIVGRLSE 309 (437)
T ss_pred ---------hcCC---CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCc--EEEEeCCCeeECCH
Confidence 0011 12345555555 477899999999999999999976654 89999999988764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.9e-11 Score=130.68 Aligned_cols=206 Identities=23% Similarity=0.273 Sum_probs=138.5
Q ss_pred hCCCCceeEEEEEEecCC-----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHh
Q 002343 523 SDQHPNIVRWYGVESDQD-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (934)
Q Consensus 523 ~l~HpNIV~l~g~~~~~~-----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (934)
.+.|.|||+++.++.+.. ...++.| ||..|++.++|++....
T Consensus 123 qlvHsnlvkfH~yw~d~K~~e~~rviFite----------ymssgs~~~fLkrt~~~----------------------- 169 (458)
T KOG1266|consen 123 QLVHSNLVKFHKYWTDKKYEEKPRVIFITE----------YMSSGSLKQFLKRTKKN----------------------- 169 (458)
T ss_pred HHHHHHHHHHHHhhcccccccccceEEEEe----------cccchhHHHHHHHHHHh-----------------------
Confidence 456999999999987754 4788899 89999999999754221
Q ss_pred hhhCCCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchh
Q 002343 598 WKANGHPSAQLLKVTRDIVSGLSHLHEI--GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQ 675 (934)
Q Consensus 598 ~~~~~l~~~~i~~i~~qIa~gL~yLHs~--gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~ 675 (934)
...++.....+++-||++||.|||+. .|+|.++.-+-|++..++- +|| |.+..-. .......+
T Consensus 170 --~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngL--Iki---g~~ap~s---~h~s~~~~----- 234 (458)
T KOG1266|consen 170 --QKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGL--IKI---GSVAPDS---THPSVNST----- 234 (458)
T ss_pred --hhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCce--EEe---cccCccc---cchhhhhh-----
Confidence 22345566789999999999999976 5999999999999975542 454 3322110 00000000
Q ss_pred hHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHH
Q 002343 676 LVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDAN 753 (934)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~ 753 (934)
+..+ .....|-++|.|||.-.....+.++|||+||....+|..+.-.|-.... ....+
T Consensus 235 ------~~~E--------------k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ 294 (458)
T KOG1266|consen 235 ------REAE--------------KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEEN 294 (458)
T ss_pred ------hHhh--------------hhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhh
Confidence 0000 0012467899999987777778899999999999999887444332211 11111
Q ss_pred HHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 754 IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 754 i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+..- .+.. ..+.-+++|.+||+..|..||+|.+++-||.....
T Consensus 295 ia~~---i~~l-en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 295 IANV---IIGL-ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred hhhh---eeec-cCccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence 1110 0111 11234679999999999999999999999987554
|
|
| >smart00580 PUG domain in protein kinases, N-glycanases and other nuclear proteins | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.3e-12 Score=103.89 Aligned_cols=53 Identities=51% Similarity=0.835 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHhccCCCccC--hHHHHHHhCCCCccccccccccCCchHHH-HHHH
Q 002343 862 DNVRDLLRVIRNKSNHFREL--PQDIQELLGSHPEGFYNYFSCRFPKLLIE-VYNV 914 (934)
Q Consensus 862 ~~v~dllr~irnk~~h~~el--~~~~~~~lg~~p~~~~~yf~~~fP~ll~~-~y~~ 914 (934)
++++||||+|||+.+||+|+ ++.+|+.+|++|+|+..||..+||+|+++ +|..
T Consensus 1 ~sv~dLLr~irNi~~hp~e~k~n~~~~~~l~~~pg~~~~l~~~gFp~l~~~~~y~l 56 (58)
T smart00580 1 ESVRDLLRALRNILHHPREEKGNPAIKERLGDVPGGFELYFTVGFPRLLISEVYTL 56 (58)
T ss_pred CcHHHHHHHHHHHhhCcchhhcCHHHHHHhcCCCcHHHHHHHcCCCcccccceeee
Confidence 47899999999999999999 99999999999999999999999999998 7654
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-11 Score=146.76 Aligned_cols=282 Identities=23% Similarity=0.236 Sum_probs=177.6
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecC------ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+.+.+-+-+|+++.+..+. ...|...++|..... ..+....+ .++.-.-+||-+++..-.+......+|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~-s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSK-SNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCc-cCccccCCCCceecccCCCCCCCCcchh
Confidence 334556688899999998752 223444444433211 11111111 1122234567788776666677889999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
++ +..+|+|...|+.. .+...+-.+.....+..+++|||+.
T Consensus 883 ~~----------~~~~~~~~Skl~~~-----------------------------~~~saepaRs~i~~~vqs~e~L~s~ 923 (1205)
T KOG0606|consen 883 GH----------YLNGGDLPSKLHNS-----------------------------GCLSAEPARSPILERVQSLESLHSS 923 (1205)
T ss_pred hH----------HhccCCchhhhhcC-----------------------------CCcccccccchhHHHHhhhhccccc
Confidence 99 66667777666532 1223334456667788999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCccccc---CCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ---NATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
.++|||+||.|+|+..++. .+++|||.......-...... ...+.... +.....+ ..........-..
T Consensus 924 ~r~h~~~~p~~~l~~~~gh--~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~---~~~~~~~----~~l~~~~~~~~~~ 994 (1205)
T KOG0606|consen 924 LRKHRDLKPDSLLIAYDGH--RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRR---LSRSERR----PQLSADEARRKHA 994 (1205)
T ss_pred hhhcccccccchhhcccCC--cccCccccccccccccCcCCcccccccCcccc---ccccccc----cccccchhhcccc
Confidence 9999999999999977765 789999955433211000000 00000000 0000000 0000000011223
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcc--cccccCCCHHHHHHHHHcc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRK--DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~--~~~~~~~~~e~~dLI~~~L 778 (934)
..||+.|.|||.+.+.....++|+|++|++++|.++| .+||.... ++.. ++..... ...+...++++++++.++|
T Consensus 995 ~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g-~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen 995 VVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG-IPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLL 1073 (1205)
T ss_pred ccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC-CCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhh
Confidence 5799999999999999999999999999999999996 77776543 3333 2322221 2223455789999999999
Q ss_pred cCCCCCCcCHH---HHHcCCCCCCccchh
Q 002343 779 DPNPDLRPKAQ---NVLNHPFFWTADTRL 804 (934)
Q Consensus 779 ~~DP~~RPTa~---evL~HPff~~~~~~~ 804 (934)
..+|.+|..+. ++-.||||...++..
T Consensus 1074 ~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1074 TEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred ccCchhccCcccccccccCCccCCCCccc
Confidence 99999998877 999999998877654
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-10 Score=133.22 Aligned_cols=142 Identities=23% Similarity=0.225 Sum_probs=85.5
Q ss_pred eeecccCcEEEEEEEEec-CcEEEEEEeecCChhH-----------------------------H--------H------
Q 002343 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----------------------------A--------L------ 514 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~~~-----------------------------~--------~------ 514 (934)
+.||.|++|.||+|...+ |+.||||++.+.-.+. . .
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999998877 9999999986442100 0 1
Q ss_pred HHHHH---HHHhCCCCceeEEEEEEec-CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccc
Q 002343 515 KEIQN---LIASDQHPNIVRWYGVESD-QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589 (934)
Q Consensus 515 ~Ei~~---ll~~l~HpNIV~l~g~~~~-~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~ 589 (934)
+|..+ +.....+.+.|.+-.++.+ ....+||||||.| .+.++.. +.....+.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~---------l~~~g~d~-------------- 261 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAA---------LRAAGTDM-------------- 261 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHH---------HHhcCCCH--------------
Confidence 11111 1122234444554444433 4457899997775 3433211 11000000
Q ss_pred cchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCC
Q 002343 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGD 661 (934)
Q Consensus 590 ~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~ 661 (934)
..+.+..+..++.|+. ..|++|+|+||.||+++.++ ...+++.|||++..+...
T Consensus 262 -----------~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 262 -----------KLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -----------HHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 0011223344455544 58999999999999998765 125899999999887653
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.4e-09 Score=106.79 Aligned_cols=126 Identities=16% Similarity=0.049 Sum_probs=83.9
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCc-eeEEEEEEecCCeEEEEEecccCChh
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPN-IVRWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpN-IV~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
.+.|+.|.++.||+.. ..++.|++|....... ....+|.. .+..+.+.+ +.+++.+.. ...++|||++++
T Consensus 3 ~~~l~~G~~~~vy~~~-~~~~~~~lK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G--- 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVE-VANKKYVVRIPGNGTELLINRENEAE-NSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG--- 75 (170)
T ss_pred eeecCCcccCceEEEE-ECCeEEEEEeCCCCcccccCHHHHHH-HHHHHHHhCCCCceEEEeC--CCCeEEEEecCC---
Confidence 3578999999999865 4588999998755431 22345554 333333333 445665543 235799996665
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC-----cc
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL-----IH 629 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI-----VH 629 (934)
.++... ......++.+++.+|+.||+.++ +|
T Consensus 76 -------~~l~~~-------------------------------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~H 111 (170)
T cd05151 76 -------SELLTE-------------------------------------DFSDPENLEKIAKLLKKLHSSPLPDLVPCH 111 (170)
T ss_pred -------Cccccc-------------------------------------cccCHHHHHHHHHHHHHHhCCCCCCceeec
Confidence 222110 00012456789999999999885 99
Q ss_pred cCCCCCeEEEecCCCceEEEeecccccc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
+|++|.||+++ ++ .++++|||.+..
T Consensus 112 gD~~~~Nil~~-~~--~~~liDf~~a~~ 136 (170)
T cd05151 112 NDLLPGNFLLD-DG--RLWLIDWEYAGM 136 (170)
T ss_pred CCCCcCcEEEE-CC--eEEEEecccccC
Confidence 99999999997 33 489999999875
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-08 Score=106.32 Aligned_cols=135 Identities=19% Similarity=0.111 Sum_probs=89.4
Q ss_pred eeecccCcEEEEEEEEe-------cCcEEEEEEeecCC-------------------------hh----HHHHHHHHHHH
Q 002343 479 KEIAKGSNGTVVLEGNY-------EGRSVAVKRLVKTH-------------------------HD----VALKEIQNLIA 522 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~-------~g~~VAVK~l~~~~-------------------------~~----~~~~Ei~~ll~ 522 (934)
..||.|--+.||.+... .+..+|||+..-.. .. -+.+|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999998443 35799999764210 00 12366664443
Q ss_pred hCC-CCceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhC
Q 002343 523 SDQ-HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKAN 601 (934)
Q Consensus 523 ~l~-HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (934)
.-. .-++.+.+++ ...+||||+++++..-. ..| +..
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~---------~~L------------------------------kd~ 119 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPA---------PKL------------------------------KDA 119 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccc---------hhh------------------------------hcc
Confidence 322 2456666654 45789999776531000 000 011
Q ss_pred CCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 602 GHPSAQLLKVTRDIVSGLSHL-HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 602 ~l~~~~i~~i~~qIa~gL~yL-Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
.++.+++..+..|++.+|..| |+.||||+||++.|||+.. + .+.|+|||.|....
T Consensus 120 ~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~-~--~v~iIDF~qav~~~ 175 (197)
T cd05146 120 KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD-G--KVWFIDVSQSVEPT 175 (197)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC-C--cEEEEECCCceeCC
Confidence 223445667889999999999 8999999999999999964 3 38999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.7e-09 Score=119.95 Aligned_cols=163 Identities=21% Similarity=0.351 Sum_probs=113.8
Q ss_pred EEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHh
Q 002343 493 GNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLN 569 (934)
Q Consensus 493 ~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~ 569 (934)
...++.+|.|........ +.+.+.++ -++.++||||++|++.++.++.+|||+|.|.. |..+|.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k-~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P------------l~~~lk 99 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVK-RLKTLRHPNILSYLDTTEEEGTLYLVTERVRP------------LETVLK 99 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHH-HhhhccCchhhhhhhhhcccCceEEEeecccc------------HHHHHH
Confidence 445678888888765544 23344444 67889999999999999999999999997652 112221
Q ss_pred hhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCeEEEecCCCceEE
Q 002343 570 AKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAK 648 (934)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH-s~gIVHRDLKP~NILl~~d~~~~vK 648 (934)
+ +....+.-.+.||+.||.||| +.+++|++|.-+-|+++..|. -|
T Consensus 100 ~--------------------------------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge--Wk 145 (690)
T KOG1243|consen 100 E--------------------------------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE--WK 145 (690)
T ss_pred H--------------------------------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc--EE
Confidence 1 113456677899999999998 568999999999999988876 79
Q ss_pred EeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccc
Q 002343 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFS 728 (934)
Q Consensus 649 LsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWS 728 (934)
|++|-++......... .. . ..--..|..|+.+.... -..|.|-
T Consensus 146 Lggle~v~~~~~~~~~----~~-----~--------------------------~~~~~s~~~P~~~~~s~--~s~D~~~ 188 (690)
T KOG1243|consen 146 LGGLELVSKASGFNAP----AK-----S--------------------------LYLIESFDDPEEIDPSE--WSIDSWG 188 (690)
T ss_pred EeeeEEEeccccCCcc----cc-----c--------------------------chhhhcccChhhcCccc--cchhhhh
Confidence 9999887654332110 00 0 00011366666543222 4579999
Q ss_pred hhhhhHHhhcC
Q 002343 729 LGCILFFCITG 739 (934)
Q Consensus 729 LGvILyeLltG 739 (934)
|||++++++.|
T Consensus 189 Lg~li~el~ng 199 (690)
T KOG1243|consen 189 LGCLIEELFNG 199 (690)
T ss_pred HHHHHHHHhCc
Confidence 99999999986
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-09 Score=124.54 Aligned_cols=207 Identities=21% Similarity=0.346 Sum_probs=132.2
Q ss_pred HHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccc-cCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 614 DIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLT-QNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 614 qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
+++.||.|+|. .++||+.|.|++|.++..+. .||+-|+.+....+.....- ......+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~--wkl~Gf~f~v~~~~~~~~p~~~yd~~lp------------------ 166 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGD--WKLAGFSFCVNANGPTEYPFSEYDPPLP------------------ 166 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcc--eeeccchhhhccCCCCccccccCCCCCC------------------
Confidence 55699999996 58999999999999977665 79999998876554222110 0000000
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-h----HHHHHHhhcccccccCC
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-E----RDANIVKDRKDLFLVEH 766 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~----~~~~i~~~~~~~~~~~~ 766 (934)
. ...-...|.|||++.+...+.++|+||+||++|.+..||+.-+.... . ...+...........+.
T Consensus 167 -------~--~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~ 237 (700)
T KOG2137|consen 167 -------L--LLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNL 237 (700)
T ss_pred -------h--hhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccC
Confidence 0 01235679999999998889999999999999999977766543221 1 11111111111122445
Q ss_pred CHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc-chhhhhhhhcccchhccccchHHHHHHHHhhhhHhcCCcchhhh
Q 002343 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD-TRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKM 845 (934)
Q Consensus 767 ~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~-~~~~fl~~~sd~~e~~~~~~~~~l~~~le~~~~~~~~~~w~~~~ 845 (934)
.+|+++=+.++|..++..||++.+++..|||.+.. +.+.|+.++..+ +....+..++.|-..-.....+-|..++
T Consensus 238 p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~aLrfLD~l~~k----dn~qKs~Flk~Ls~~ip~fp~rv~~~ki 313 (700)
T KOG2137|consen 238 PSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKALRFLDDLPQK----DNSQKSSFLKGLSKLIPTFPARVLFQKI 313 (700)
T ss_pred cHHHHHHHHHHhcCCcccCcchhhhhcccccCCchhhhhhhccccccc----CcHHHHHHHHHHHHhhccCCHHHHHHhh
Confidence 68999999999999999999999999999997654 344566555432 1122233444443333233334455555
Q ss_pred hHHHHhhh
Q 002343 846 ETKFIENI 853 (934)
Q Consensus 846 ~~~~~~~l 853 (934)
=+.+.+.+
T Consensus 314 LP~L~~el 321 (700)
T KOG2137|consen 314 LPTLVAEL 321 (700)
T ss_pred hhHHHHHh
Confidence 55555544
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-08 Score=111.85 Aligned_cols=224 Identities=19% Similarity=0.188 Sum_probs=149.7
Q ss_pred cEEEEEE-EEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEEEEEecccC--Chhhh
Q 002343 486 NGTVVLE-GNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSLERCTC--SLNDL 556 (934)
Q Consensus 486 fGtVy~~-~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~yLVmE~c~~--sL~dl 556 (934)
-.+.|++ ...+|..|++||+..... ......+....+.+.|+|||++.+++.. +..+++|++|.++ +|.|+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3466777 668899999999943221 1122233346788899999999999874 4469999999875 67777
Q ss_pred HHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCe
Q 002343 557 IYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636 (934)
Q Consensus 557 i~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~N 636 (934)
.+...-.. .. ..........+.|+..++.++.|+..||.++|+.|..-+-|.|.+
T Consensus 369 ~F~~~~~t--------~~-----------------~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~k 423 (655)
T KOG3741|consen 369 YFANPPFT--------KR-----------------TNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKK 423 (655)
T ss_pred HccCCccc--------cc-----------------cccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhH
Confidence 54422110 00 000111224567899999999999999999999999999999999
Q ss_pred EEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcc
Q 002343 637 VLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL 716 (934)
Q Consensus 637 ILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~ 716 (934)
||+ .|+.+++|+-.|+...+..+.. |-+.
T Consensus 424 Ilv--~G~~RIriS~C~i~Dvl~~d~~-------------------------------------------------~~le 452 (655)
T KOG3741|consen 424 ILV--TGKMRIRISGCGIMDVLQEDPT-------------------------------------------------EPLE 452 (655)
T ss_pred eEe--eCcceEEEecccceeeecCCCC-------------------------------------------------cchh
Confidence 999 4555688887777665544320 0011
Q ss_pred cCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 717 QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 717 ~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+ -.+-|.=.||.+++.|.||...-+.........+ .......+.+++++|.-+...++++ -++.+++.|
T Consensus 453 ~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~-----~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 453 S---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHL-----TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred H---HhhhhHHHHHHHHHHHhhcccccccccchHHHHH-----HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 1 2245777899999999998544333222111110 1112234678899999998888886 678888876
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.2e-08 Score=111.92 Aligned_cols=159 Identities=14% Similarity=0.194 Sum_probs=108.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCc--eeecc---c--cccCCCCccccccCCCCceeEEeccccCceeecc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP--IYSSY---Q--ASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLS 119 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~--i~~~~---~--~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp 119 (934)
.++.+++.+-+|.|+++|..||+++|+++.+.. ..+.. . .........+|+- ..+|.||.++...|++. =-
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~-~~~g~l~ald~~tG~~~-W~ 145 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIG-SEKGQVYALNAEDGEVA-WQ 145 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEE-cCCCEEEEEECCCCCCc-cc
Confidence 678899999999999999999999999986541 11100 0 0001111235543 46899999998888763 12
Q ss_pred cCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccc
Q 002343 120 SSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (934)
Q Consensus 120 ~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (934)
+..+.-+.++|.+. ||.||++.-...++.+|++||+++-++....... ... ....|...+
T Consensus 146 ~~~~~~~~ssP~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~-----------~~~-----~~~sP~v~~--- 205 (394)
T PRK11138 146 TKVAGEALSRPVVS-DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSL-----------TLR-----GESAPATAF--- 205 (394)
T ss_pred ccCCCceecCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcc-----------ccc-----CCCCCEEEC---
Confidence 22233356899998 8899999999999999999999999987532100 000 000122111
Q ss_pred ccceEEEEeeeEEEEEecCCCCceEEEEEe
Q 002343 200 IRQLVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 200 ~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
..+|++-.+=.|.++|.++|+++|....
T Consensus 206 --~~v~~~~~~g~v~a~d~~~G~~~W~~~~ 233 (394)
T PRK11138 206 --GGAIVGGDNGRVSAVLMEQGQLIWQQRI 233 (394)
T ss_pred --CEEEEEcCCCEEEEEEccCChhhheecc
Confidence 2688888888899999999999998654
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.7e-07 Score=107.42 Aligned_cols=155 Identities=15% Similarity=0.179 Sum_probs=110.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
-++.++|.+-||.|+++|..||++.|+++.+..+..+ . ...+..+|+- ..||.||.++...|++. --+..+.-+
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~-p---~v~~~~v~v~-~~~g~l~ald~~tG~~~-W~~~~~~~~ 137 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGG-V---GADGGLVFVG-TEKGEVIALDAEDGKEL-WRAKLSSEV 137 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccc-e---EEcCCEEEEE-cCCCEEEEEECCCCcEe-eeeccCcee
Confidence 5778999999999999999999999999987766432 1 1122345554 35799999988788763 122223335
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
..+|.+. |+.+|++.....++.+|++||+++-.+....... . .. ....|...+ ..+|+
T Consensus 138 ~~~p~v~-~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~----~--~~----------~~~sp~~~~-----~~v~~ 195 (377)
T TIGR03300 138 LSPPLVA-NGLVVVRTNDGRLTALDAATGERLWTYSRVTPAL----T--LR----------GSASPVIAD-----GGVLV 195 (377)
T ss_pred ecCCEEE-CCEEEEECCCCeEEEEEcCCCceeeEEccCCCce----e--ec----------CCCCCEEEC-----CEEEE
Confidence 5788886 7889999988999999999999999886532100 0 00 001122212 26788
Q ss_pred EeeeEEEEEecCCCCceEEEEEe
Q 002343 207 MRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 207 ~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
+-.+-.|.++|+++|+++|...+
T Consensus 196 ~~~~g~v~ald~~tG~~~W~~~~ 218 (377)
T TIGR03300 196 GFAGGKLVALDLQTGQPLWEQRV 218 (377)
T ss_pred ECCCCEEEEEEccCCCEeeeecc
Confidence 88888999999999999997543
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.7e-07 Score=105.80 Aligned_cols=165 Identities=18% Similarity=0.230 Sum_probs=111.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
.++.++|.+.||+|+++|..||+++|+...+..+.++ . ......+|+. ..||.||.++...|++. +.+...+.+
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~-p---~v~~~~v~v~-~~~g~l~a~d~~tG~~~W~~~~~~~~~ 178 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP-P---LVANGLVVVR-TNDGRLTALDAATGERLWTYSRVTPAL 178 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC-C---EEECCEEEEE-CCCCeEEEEEcCCCceeeEEccCCCce
Confidence 5778899999999999999999999999987766543 1 1112245554 46899999998887653 333332221
Q ss_pred ---HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 126 ---IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 126 ---v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
...+|++. ||.+|+|.....++.+|++||+++-+........ ..+....-. -.-.|... ..
T Consensus 179 ~~~~~~sp~~~-~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g-----~~~~~~~~~-----~~~~p~~~-----~~ 242 (377)
T TIGR03300 179 TLRGSASPVIA-DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKG-----RTELERLVD-----VDGDPVVD-----GG 242 (377)
T ss_pred eecCCCCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeeccccCCC-----CCchhhhhc-----cCCccEEE-----CC
Confidence 13678876 7899999999999999999999887654322100 000000000 00011111 13
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEEEeeee
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
.||++..+-.|.++|.++|++.|+.....+
T Consensus 243 ~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~ 272 (377)
T TIGR03300 243 QVYAVSYQGRVAALDLRSGRVLWKRDASSY 272 (377)
T ss_pred EEEEEEcCCEEEEEECCCCcEEEeeccCCc
Confidence 789988888999999999999999875443
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.5e-07 Score=96.41 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEec-----CCCceEEEeecccccc
Q 002343 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK-----DKSFCAKLSDMGISKR 657 (934)
Q Consensus 604 ~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~-----d~~~~vKLsDFGlAk~ 657 (934)
+......++.+++..+.-||+.||+|+|+++.|||++. ++...+.|+||+.++.
T Consensus 136 ~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 136 DPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 34556789999999999999999999999999999975 2345789999998864
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.4e-07 Score=96.04 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=51.9
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCC----hhHHHHHHHHHHHhCCC--CceeEEEEEEecC---CeEEEEEecc
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQH--PNIVRWYGVESDQ---DFVYLSLERC 549 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~~---~~~yLVmE~c 549 (934)
+.||.|..+.||+....+|+.+++|...... .....+|.. +++.+.+ .++.+++.+.... +..|+|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~-~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYR-VLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHH-HHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 4689999999999766667899999876432 233455554 4455443 4567777776654 3678999999
Q ss_pred cC-Chhh
Q 002343 550 TC-SLND 555 (934)
Q Consensus 550 ~~-sL~d 555 (934)
++ ++.+
T Consensus 83 ~G~~l~~ 89 (223)
T cd05154 83 DGRVLRD 89 (223)
T ss_pred CCEecCC
Confidence 87 3443
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.7e-07 Score=89.14 Aligned_cols=140 Identities=22% Similarity=0.274 Sum_probs=90.3
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEE-eecCCh----------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKR-LVKTHH----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~-l~~~~~----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
...|-+|+-+.|+. +.+.|+...||. +.+... ....+|.. ++..+.--.|.--.=++.|...-.|+|
T Consensus 12 l~likQGAEArv~~-~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear-~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 12 LELIKQGAEARVPR-GSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEAR-LLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred ceeeeccceeeEee-eccCCceeEEeecccccccchHHHHHHHHHHHHHHHH-HHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 45788999999987 677888877774 333211 12334544 444333222222222344555667889
Q ss_pred ecccC--ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 547 ERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 547 E~c~~--sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|+.++ ++.+++.+.. ......+....++++|-+.+.-||.
T Consensus 90 E~~~g~~~vk~~i~~~~--------------------------------------~~~~~d~~~~~~~~~iG~~igklH~ 131 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTM--------------------------------------EDESEDEGLAELARRIGELIGKLHD 131 (229)
T ss_pred EeccchhHHHHHHHHHc--------------------------------------cCcccchhHHHHHHHHHHHHHHhhh
Confidence 98876 5555553210 0111122336788899999999999
Q ss_pred CCCcccCCCCCeEEEecCCC-ceEEEeecccccc
Q 002343 625 IGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKR 657 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~-~~vKLsDFGlAk~ 657 (934)
.+|||+||..+||++.+++. ..+.++|||++..
T Consensus 132 ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 132 NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99999999999999986653 4468999999853
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.6e-07 Score=89.99 Aligned_cols=125 Identities=20% Similarity=0.351 Sum_probs=80.7
Q ss_pred eecccCcEEEEEEEEecCcEEEEEE-eecCCh----------hHHHHHHHHHHHhCC--CCceeEEEEEEecCCeEEEEE
Q 002343 480 EIAKGSNGTVVLEGNYEGRSVAVKR-LVKTHH----------DVALKEIQNLIASDQ--HPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~~g~~VAVK~-l~~~~~----------~~~~~Ei~~ll~~l~--HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|++|+-+.+|.+ .+-|..+.+|. +.|... +...+|.. ++..+. --|+..+++ .+.+...|+|
T Consensus 3 ~i~~GAEa~i~~~-~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Ear-il~~a~~~GV~~P~v~d--vD~~~~~I~m 78 (204)
T COG3642 3 LIKQGAEAIIYLT-DFLGLPAVVKERIPKRYRHPELDEKLRRERTRREAR-ILAKAREAGVPVPIVYD--VDPDNGLIVM 78 (204)
T ss_pred hhhCCcceeEEee-eccCcceEEEeecCcccCChHHHHHHHHHHHHHHHH-HHHHHHHcCCCCCeEEE--EcCCCCEEEE
Confidence 5789999999985 44566667774 333211 12234443 444332 233344444 4566678999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||.+|. .|.+.+... ...+++.+-.-+.-||..|
T Consensus 79 e~I~G~----------~lkd~l~~~------------------------------------~~~~~r~vG~~vg~lH~~g 112 (204)
T COG3642 79 EYIEGE----------LLKDALEEA------------------------------------RPDLLREVGRLVGKLHKAG 112 (204)
T ss_pred EEeCCh----------hHHHHHHhc------------------------------------chHHHHHHHHHHHHHHhcC
Confidence 966653 233332210 1346667777788999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
|||+||.++||++..++ +.++||||+..
T Consensus 113 ivHGDLTtsNiIl~~~~---i~~IDfGLg~~ 140 (204)
T COG3642 113 IVHGDLTTSNIILSGGR---IYFIDFGLGEF 140 (204)
T ss_pred eecCCCccceEEEeCCc---EEEEECCcccc
Confidence 99999999999996553 78999999975
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1e-06 Score=101.77 Aligned_cols=163 Identities=15% Similarity=0.203 Sum_probs=112.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
.++.++|.+.||.|+++|..||+++|+...+.+++++ ++ - .+..+|+. ..||.||.++...|++. +.+...+.+
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ss-P~--v-~~~~v~v~-~~~g~l~ald~~tG~~~W~~~~~~~~~ 193 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSR-PV--V-SDGLVLVH-TSNGMLQALNESDGAVKWTVNLDVPSL 193 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecC-CE--E-ECCEEEEE-CCCCEEEEEEccCCCEeeeecCCCCcc
Confidence 4567888999999999999999999999987766553 11 1 12235554 45789999999888765 566554443
Q ss_pred ---HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 126 ---IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 126 ---v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
...+|.+. +|.+|+|.-...++.+|++||+.+-......... ..+....-. ....|-..+ .
T Consensus 194 ~~~~~~sP~v~-~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~-----~~~~~~~~~-----~~~sP~v~~-----~ 257 (394)
T PRK11138 194 TLRGESAPATA-FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTG-----ATEIDRLVD-----VDTTPVVVG-----G 257 (394)
T ss_pred cccCCCCCEEE-CCEEEEEcCCCEEEEEEccCChhhheeccccCCC-----ccchhcccc-----cCCCcEEEC-----C
Confidence 24789987 6779999999999999999999887764322100 000000000 001122212 3
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
.||++..+=.+.++|.++|+++|...+.
T Consensus 258 ~vy~~~~~g~l~ald~~tG~~~W~~~~~ 285 (394)
T PRK11138 258 VVYALAYNGNLVALDLRSGQIVWKREYG 285 (394)
T ss_pred EEEEEEcCCeEEEEECCCCCEEEeecCC
Confidence 7888887889999999999999987544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.5e-08 Score=114.34 Aligned_cols=245 Identities=18% Similarity=0.160 Sum_probs=163.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCc-eeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN-IVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpN-IV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.+...+..++|+++++++++-...+....+.+... ....-++ +++.+++||| .+++++-++.++..++++++|.+
T Consensus 242 kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~--l~~rl~~-eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~ 318 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT--LSRRLAI-ELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICST 318 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCChhhheeceeeccc--hhhHHHH-HHHHHccCCCCcccccccCCcccccchhhhhhcC
Confidence 344455678999999999864433344445655433 2222333 4889999999 88999999999999999998876
Q ss_pred C--hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 552 S--LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 552 s--L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. -.+.+... .-.+..-+...+.+.-+++|+|||+.-=+|
T Consensus 319 ~rs~~~~~~~s---------------------------------------e~~~~~~~~~~~~r~et~~l~~l~~~~~~~ 359 (829)
T KOG0576|consen 319 GRSSALEMTVS---------------------------------------EIALEQYQFAYPLRKETRPLAELHSSYKVH 359 (829)
T ss_pred CccccccCChh---------------------------------------hHhhhhhhhhhhhhhhcccccccccccccC
Confidence 4 11111000 000112345567788889999999988899
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|| |||.+... .|..||+....+...... .+..+|+.|
T Consensus 360 ~d----~~l~s~~~---~~~~~~~v~~~L~~~~~~------------------------------------~t~~~~~~~ 396 (829)
T KOG0576|consen 360 RD----NILGSEEE---VKLLDFAVPPQLTRTMKP------------------------------------RTAIGTPEP 396 (829)
T ss_pred cc----cccccccc---cccccccCCcccCccccc------------------------------------ccCCCCCCC
Confidence 99 99987643 689999998877654311 115699999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccccccc----CCC-HHHHHHHHHcccCCCCC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV----EHI-PEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~----~~~-~e~~dLI~~~L~~DP~~ 784 (934)
+|||+...+.+..+.|.||+|+--.++.-| .+|-....... ..+...+..+.. ... .+-.++...|+...|..
T Consensus 397 ~~pev~~~~~~~~~p~~~~~~~~~~~~ap~-~pPr~~P~~~~-~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~ 474 (829)
T KOG0576|consen 397 LAPEVIQENTIDGCPDSGSLAVSAIQMAPG-LPPRSSPPAVL-PMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPT 474 (829)
T ss_pred CCchhhcccccccCCCccCCCcchhhcCCC-CCCCCCCcccc-CCCCCCCCccccchhhhcCcccccCCcccccCCCCCC
Confidence 999999999999999999999876677664 44433211100 000000000000 001 12235788999999999
Q ss_pred CcCHHHHHcCCCCCCccchh
Q 002343 785 RPKAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RPTa~evL~HPff~~~~~~~ 804 (934)
|+...+.+-|.+|.....++
T Consensus 475 pkv~mgacfsKvfngCpl~i 494 (829)
T KOG0576|consen 475 PKVHMGACFSKVFNGCPLRI 494 (829)
T ss_pred CcchhhHHHHHHhccCcccc
Confidence 99999999999997765443
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-06 Score=88.49 Aligned_cols=49 Identities=22% Similarity=0.417 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHH-HHHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 608 LLKVTRDIVSGLSH-LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 608 i~~i~~qIa~gL~y-LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
...++.+++..+.. +|..||||+||.+.|||++.+ .+.|+|||.|....
T Consensus 108 ~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~---~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 108 PKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG---KVYIIDFGQAVDSS 157 (188)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT---CEEE--GTTEEETT
T ss_pred HHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc---eEEEEecCcceecC
Confidence 45677778776655 579999999999999999765 38999999887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3e-06 Score=94.27 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=141.4
Q ss_pred EeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEE------ecC-CeEEEEEecc
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVE------SDQ-DFVYLSLERC 549 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~------~~~-~~~yLVmE~c 549 (934)
....||+|+.+.+|--+...+ .| -|+..+.-.....+....+.+--.||-+-.=+.+- -++ ..+-+.|...
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d-~V-AKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~v 92 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRD-QV-AKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPKV 92 (637)
T ss_pred CCccccCCccceeeecchhhc-hh-heeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecccC
Confidence 456899999999986433332 23 36555443333333333344555666544311111 011 2255677765
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
.+- + ....+++.. .|.+ ...-..++-+++.++.++.+.+-||+.|.+-
T Consensus 93 ~g~--~-------pI~~~y~p~---------tRRq--------------s~P~~~w~fllrvaRnlA~aFA~lH~~Gh~v 140 (637)
T COG4248 93 SGK--E-------PIHMIYSPA---------TRRQ--------------SYPHCAWDFLLRVARNLASAFATLHEHGHVV 140 (637)
T ss_pred CCc--c-------chhhhcCch---------hhcc--------------cCCccccHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 542 0 001111100 0000 1123467889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
+|+.++|+|+++++. +.|.|=..-..-..+.. +.-.+|.+.|
T Consensus 141 GDVn~~~~lVsd~~~--V~LVdsDsfqi~~ng~~------------------------------------~~cpVg~~ef 182 (637)
T COG4248 141 GDVNQNSFLVSDDSK--VVLVDSDSFQINANGTL------------------------------------HLCPVGVSEF 182 (637)
T ss_pred cccCccceeeecCce--EEEEcccceeeccCCce------------------------------------EecccCcccc
Confidence 999999999987765 66665321111011000 0014689999
Q ss_pred ccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchhH-------HHHHHh--------hcccc-cc-----
Q 002343 710 QAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-------DANIVK--------DRKDL-FL----- 763 (934)
Q Consensus 710 ~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-------~~~i~~--------~~~~~-~~----- 763 (934)
.+||.-. +-.-+...|.|.||+++++++.||.|||...... +..|.. ..... ..
T Consensus 183 tPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P 262 (637)
T COG4248 183 TPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIP 262 (637)
T ss_pred CCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCC
Confidence 9999764 2344678999999999999999999999653221 111111 11111 11
Q ss_pred -cCCCHHHHHHHHHcccCC--CCCCcCHHH
Q 002343 764 -VEHIPEAVDLFTRLLDPN--PDLRPKAQN 790 (934)
Q Consensus 764 -~~~~~e~~dLI~~~L~~D--P~~RPTa~e 790 (934)
.-..+.+..|..+|+..- +.-|||++.
T Consensus 263 ~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 263 LSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred hhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 112467888888888643 568999754
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.2e-06 Score=89.91 Aligned_cols=150 Identities=23% Similarity=0.397 Sum_probs=101.3
Q ss_pred CCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHHhcCCeeecCC
Q 002343 57 DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDG 136 (934)
Q Consensus 57 dG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg 136 (934)
+|+|+++|..+|+.+|+..-++.+....-.... .+..+|+. ..++.||..+...|++ .--+++++-+...|... +|
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~l~~~d~~tG~~-~W~~~~~~~~~~~~~~~-~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVP-DGGRVYVA-SGDGNLYALDAKTGKV-LWRFDLPGPISGAPVVD-GG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEE-ETTEEEEE-ETTSEEEEEETTTSEE-EEEEECSSCGGSGEEEE-TT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEE-eCCEEEEE-cCCCEEEEEECCCCCE-EEEeeccccccceeeec-cc
Confidence 799999999999999999865544322100111 12245555 4899999999888876 33333344444668555 78
Q ss_pred ceEeeceeeEEEEEeCCCceEEEEE-ecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEE
Q 002343 137 GVTLGAMKTSVFLVDVKSGRVVDNY-VLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQS 215 (934)
Q Consensus 137 ~~~~G~k~~t~f~vd~~tG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~ 215 (934)
.+|++.....++.+|++||+++... ....... + ... ...+... ...+|++.++..|.+
T Consensus 78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~--~--------~~~------~~~~~~~-----~~~~~~~~~~g~l~~ 136 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA--G--------VRS------SSSPAVD-----GDRLYVGTSSGKLVA 136 (238)
T ss_dssp EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC--S--------TB--------SEEEEE-----TTEEEEEETCSEEEE
T ss_pred ccccccceeeeEecccCCcceeeeecccccccc--c--------ccc------ccCceEe-----cCEEEEEeccCcEEE
Confidence 8898887779999999999999994 4321100 0 000 0001111 137899999999999
Q ss_pred ecCCCCceEEEEEeee
Q 002343 216 TSQDSGEVLWNVAYAD 231 (934)
Q Consensus 216 ~~~~s~~~~WN~t~~~ 231 (934)
+|+++|+++|+.+..+
T Consensus 137 ~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 137 LDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EETTTTEEEEEEESST
T ss_pred EecCCCcEEEEeecCC
Confidence 9999999999998844
|
... |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=83.96 Aligned_cols=55 Identities=25% Similarity=0.440 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCC-CceEEEeecccccccc
Q 002343 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQ 659 (934)
Q Consensus 605 ~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~ 659 (934)
......++.+++..++-||+.||+|+|++|.|||+..++ ...+.++||+.++...
T Consensus 117 ~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 117 PSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred hhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 345678899999999999999999999999999998764 4568999999887643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.5e-05 Score=84.73 Aligned_cols=167 Identities=19% Similarity=0.286 Sum_probs=106.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeec-ccCH-H-
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKL-SSSA-E- 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~kl-p~ti-~- 123 (934)
.+..++|++-+|.|+++|..||+++|++..+.++..+ + ......+|+.+ .|++||.++...|++..- ..+. +
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~---~-~~~~~~v~v~~-~~~~l~~~d~~tG~~~W~~~~~~~~~ 109 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA---P-VVDGGRVYVGT-SDGSLYALDAKTGKVLWSIYLTSSPP 109 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG---E-EEETTEEEEEE-TTSEEEEEETTTSCEEEEEEE-SSCT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce---e-eeccccccccc-ceeeeEecccCCcceeeeeccccccc
Confidence 5788999999999999999999999999976665443 1 11122456665 566999999888866422 1111 1
Q ss_pred -HHHh-cCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccccc
Q 002343 124 -EYIR-RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (934)
Q Consensus 124 -e~v~-~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (934)
.+.. .+|.+. ++.+|++.....++.+|++||+++-.+..........+. .... . .-.+-.. +
T Consensus 110 ~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~-----~~~~---~--~~~~~~~-----~ 173 (238)
T PF13360_consen 110 AGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS-----SFSD---I--NGSPVIS-----D 173 (238)
T ss_dssp CSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE-----EETT---E--EEEEECC-----T
T ss_pred cccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee-----eecc---c--ccceEEE-----C
Confidence 1212 223333 677999999999999999999999998763311000000 0000 0 0000011 1
Q ss_pred ceEEEEeeeEEEEEecCCCCceEEEEEeeeecc
Q 002343 202 QLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKA 234 (934)
Q Consensus 202 ~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~~a 234 (934)
..||+.-.+..+..+|..+|+.+|+.+.....+
T Consensus 174 ~~v~~~~~~g~~~~~d~~tg~~~w~~~~~~~~~ 206 (238)
T PF13360_consen 174 GRVYVSSGDGRVVAVDLATGEKLWSKPISGIYS 206 (238)
T ss_dssp TEEEEECCTSSEEEEETTTTEEEEEECSS-ECE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEecCCCccC
Confidence 278998888866666999999999777555443
|
... |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.1e-05 Score=93.61 Aligned_cols=167 Identities=13% Similarity=0.156 Sum_probs=105.8
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCce------eeccccccCCCCcccccc--------CCCCceeEEeccccCc
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPI------YSSYQASFNSNASEFYLD--------VDEDWELYFHSKRFGK 114 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i------~~~~~~~~~~~~~~~~l~--------~~~d~~ly~~~~~~g~ 114 (934)
+.++|++.||.|+|+|..||+++|++..++.+ .++ . .....-+|+- |..+|.||.++...|+
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ss-P---~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~ 186 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGA-P---TIVKKLVIIGSSGAEFFACGVRGALRAYDVETGK 186 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCC-C---EEECCEEEEeccccccccCCCCcEEEEEECCCCc
Confidence 89999999999999999999999999987763 221 1 1111123332 3568999999988886
Q ss_pred ee-ecccCHHH-------------------HHhcCCeee-cCCceEeecee------------------eEEEEEeCCCc
Q 002343 115 MK-KLSSSAEE-------------------YIRRMPYIS-KDGGVTLGAMK------------------TSVFLVDVKSG 155 (934)
Q Consensus 115 ~~-klp~ti~e-------------------~v~~sP~~s-~Dg~~~~G~k~------------------~t~f~vd~~tG 155 (934)
.. +.++.-++ -|-++|.+. .+|.||+|.-. ++++.+|++||
T Consensus 187 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG 266 (488)
T cd00216 187 LLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTG 266 (488)
T ss_pred eeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCC
Confidence 64 33332111 122356665 47899999743 38999999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 156 RVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
++.=.+..... ..+.-+.. . .+.+.+-...+. .....+|++=.+=.|.++|.++|+++|.....
T Consensus 267 ~~~W~~~~~~~----~~~~~~~~---s---~p~~~~~~~~~g-~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~ 330 (488)
T cd00216 267 KVKWFYQTTPH----DLWDYDGP---N---QPSLADIKPKDG-KPVPAIVHAPKNGFFYVLDRTTGKLISARPEV 330 (488)
T ss_pred CEEEEeeCCCC----CCcccccC---C---CCeEEeccccCC-CeeEEEEEECCCceEEEEECCCCcEeeEeEee
Confidence 99999864321 11110110 0 000000000111 01137888877778999999999999987655
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.5e-05 Score=92.87 Aligned_cols=178 Identities=15% Similarity=0.204 Sum_probs=108.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCc-eeeccccc---cCCCC-ccccccCCCCceeEEeccccCcee-eccc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP-IYSSYQAS---FNSNA-SEFYLDVDEDWELYFHSKRFGKMK-KLSS 120 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~-i~~~~~~~---~~~~~-~~~~l~~~~d~~ly~~~~~~g~~~-klp~ 120 (934)
.++.++|.+-||.|+++|..||+++|++..+.+ ..+..... ..... ..+|+-+ .||.||.++...|+.. +...
T Consensus 60 ~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~-~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 60 VDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGT-FDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred ECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEec-CCCeEEEEECCCCCEeeeecC
Confidence 577788899999999999999999999987554 11110000 00001 2455544 5899999998888764 2221
Q ss_pred CH---HHH-HhcCCeeecCCceEeece---------eeEEEEEeCCCceEEEEEecCCCCC-CCCCCCCCCCccccCCCc
Q 002343 121 SA---EEY-IRRMPYISKDGGVTLGAM---------KTSVFLVDVKSGRVVDNYVLDFSAS-TPGFQSDENKHVVPVDGY 186 (934)
Q Consensus 121 ti---~e~-v~~sP~~s~Dg~~~~G~k---------~~t~f~vd~~tG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 186 (934)
.- ..+ +.++|.+. ||.+|+|+- ...++.+|++||+++=.+......+ ..+.+.... ..|.....
T Consensus 139 ~~~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 216 (488)
T cd00216 139 NDQVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDR-QMWGPGGG 216 (488)
T ss_pred CCCcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCc-ceecCCCC
Confidence 11 111 67899998 799999973 4678999999999999887642211 011111110 01211111
Q ss_pred cccccccCCccccccceEEEEeee----E--------------EEEEecCCCCceEEEEEee
Q 002343 187 EELVESGVGNLKRIRQLVYIMRTD----Y--------------VLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 187 ~~~~~~~~~~~~~~~~~i~i~Rtd----Y--------------~v~~~~~~s~~~~WN~t~~ 230 (934)
...-.|.- +. ...+||++=.+ + .|.++|.++|+++|.....
T Consensus 217 ~vw~~pa~-d~--~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~ 275 (488)
T cd00216 217 TSWASPTY-DP--KTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTT 275 (488)
T ss_pred CccCCeeE-eC--CCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCC
Confidence 11111111 10 01378888433 2 7999999999999986543
|
The alignment model contains an 8-bladed beta-propeller. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=6.8e-05 Score=78.40 Aligned_cols=138 Identities=12% Similarity=0.100 Sum_probs=90.5
Q ss_pred ecccCcEEEEEEEEecCcEEEEEEeec---------CChhHHHHHHHHHHH--hCCCCceeEEE--EEEecC--CeEEEE
Q 002343 481 IAKGSNGTVVLEGNYEGRSVAVKRLVK---------THHDVALKEIQNLIA--SDQHPNIVRWY--GVESDQ--DFVYLS 545 (934)
Q Consensus 481 IG~GsfGtVy~~~~~~g~~VAVK~l~~---------~~~~~~~~Ei~~ll~--~l~HpNIV~l~--g~~~~~--~~~yLV 545 (934)
-|+|+.+.|+. -..+|+.+-+|+-.. -......+|+..|.. ...=| +.+.. +.-... -..+||
T Consensus 26 ~~rgG~SgV~r-~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQC-VERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEE-EEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccceeeeeccCCceEEEEE
Confidence 46788888886 455666788887541 122456778774332 22222 44443 222222 247899
Q ss_pred EecccC--ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 546 mE~c~~--sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|-+++ +|.+++ .+. .....+..+...++.+|+..++-||
T Consensus 104 Te~L~g~~~L~~~l-----------~~~---------------------------~~~~~~~~~k~~il~~va~~ia~LH 145 (216)
T PRK09902 104 TEDMAGFISIADWY-----------AQH---------------------------AVSPYSDEVRQAMLKAVALAFKKMH 145 (216)
T ss_pred EEeCCCCccHHHHH-----------hcC---------------------------CcCCcchHHHHHHHHHHHHHHHHHH
Confidence 997663 444443 110 0122345566789999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccc
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l 658 (934)
+.|+.|+|+-+.|||++.++...++++||--++..
T Consensus 146 ~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 146 SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 99999999999999997666667999999877643
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.6e-05 Score=91.38 Aligned_cols=116 Identities=19% Similarity=0.244 Sum_probs=82.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecccc-----------cc-----------CCCCccccccCCCCce
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQA-----------SF-----------NSNASEFYLDVDEDWE 104 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~-----------~~-----------~~~~~~~~l~~~~d~~ 104 (934)
-++++.++|-+|.|+|+|..||+.+|++..+.++....|. +. .....-+|+.. .||.
T Consensus 193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T-~Dg~ 271 (764)
T TIGR03074 193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPT-SDAR 271 (764)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEec-CCCe
Confidence 4788999999999999999999999999976655321110 00 01112366665 4999
Q ss_pred eEEeccccCceee---------c----ccCH-HH-HHhcCCeeecCCceEeece----------eeEEEEEeCCCceEEE
Q 002343 105 LYFHSKRFGKMKK---------L----SSSA-EE-YIRRMPYISKDGGVTLGAM----------KTSVFLVDVKSGRVVD 159 (934)
Q Consensus 105 ly~~~~~~g~~~k---------l----p~ti-~e-~v~~sP~~s~Dg~~~~G~k----------~~t~f~vd~~tG~~~~ 159 (934)
||.++.+.|+..- | +-.. .. .+.++|.+. ||.||+|.- .-.+..+|++||+++=
T Consensus 272 LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~-~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 272 LIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVA-GTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEE-CCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence 9999988887641 1 1110 11 246888888 788999964 4579999999999999
Q ss_pred EEecC
Q 002343 160 NYVLD 164 (934)
Q Consensus 160 ~~~~~ 164 (934)
.+...
T Consensus 351 ~~~~g 355 (764)
T TIGR03074 351 AWDPG 355 (764)
T ss_pred EEecC
Confidence 88754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.1e-05 Score=81.94 Aligned_cols=132 Identities=17% Similarity=0.129 Sum_probs=86.3
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC-------------------------hhHHHHHHHHHHHhCC-C-
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-------------------------HDVALKEIQNLIASDQ-H- 526 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-------------------------~~~~~~Ei~~ll~~l~-H- 526 (934)
...+.+.||-|--+.||.+....|.++|||.-.-.. ...+.+|+..| ..+. +
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L-~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEAL-QRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHH-HHhhhcC
Confidence 345678999999999999988899999999542110 12356777643 3332 2
Q ss_pred CceeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHH
Q 002343 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (934)
Q Consensus 527 pNIV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 606 (934)
-.|.+-+++ +...+|||+.+|-...-+ .+...
T Consensus 171 ~~VP~P~~~----nRHaVvMe~ieG~eL~~~--------------------------------------------r~~~e 202 (304)
T COG0478 171 VKVPKPIAW----NRHAVVMEYIEGVELYRL--------------------------------------------RLDVE 202 (304)
T ss_pred CCCCCcccc----ccceeeeehcccceeecc--------------------------------------------cCccc
Confidence 245555553 567899997665211000 00112
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccc
Q 002343 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656 (934)
Q Consensus 607 ~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk 656 (934)
....++..|+.-+.-+-..||||+|+.+=|||++.|+. +.++||--+.
T Consensus 203 n~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~--~~vIDwPQ~v 250 (304)
T COG0478 203 NPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD--IVVIDWPQAV 250 (304)
T ss_pred CHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC--EEEEeCcccc
Confidence 23344455555555555899999999999999988876 8999996543
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00017 Score=82.61 Aligned_cols=164 Identities=21% Similarity=0.321 Sum_probs=112.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCC-ceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccC--H
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGR-PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS--A 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~-~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~t--i 122 (934)
....++|++.||.+|++|..+|+.+|+++.+. +.+..- ....+..+|... +||.||.++...|.++ ..... +
T Consensus 110 ~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~---~v~~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~~~~~ 185 (370)
T COG1520 110 SDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASP---PVVGDGTVYVGT-DDGHLYALNADTGTLKWTYETPAPL 185 (370)
T ss_pred eCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecC---cEEcCcEEEEec-CCCeEEEEEccCCcEEEEEecCCcc
Confidence 56779999999999999999999999999876 222220 111122466555 8899999998888773 21111 4
Q ss_pred HHHHhcCCeeecCCceEeece--eeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccc
Q 002343 123 EEYIRRMPYISKDGGVTLGAM--KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg~~~~G~k--~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (934)
...+..+|. ..+|++|+|.. .+..+.+|+.+|..+-+.+-......... . +. | .+..+..- +
T Consensus 186 ~~~~~~~~~-~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~-~-~~----~------~~~~~~v~---v 249 (370)
T COG1520 186 SLSIYGSPA-IASGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAI-S-TT----P------AVDGGPVY---V 249 (370)
T ss_pred ccccccCce-eecceEEEecCCCcceEEEEEccCCcEeeeeeeecccCcccc-c-cc----c------cccCceEE---E
Confidence 555568888 66999999998 67799999999999999543221000000 0 00 1 11111111 1
Q ss_pred cceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 201 RQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 201 ~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
..-+|++..+..+.++|..+|++.|+....
T Consensus 250 ~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 250 DGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred CCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 125688888999999999999999999986
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0002 Score=85.78 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=80.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeec-cccc--c----CCCCccccccCCCCceeEEeccccCcee-ec
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSS-YQAS--F----NSNASEFYLDVDEDWELYFHSKRFGKMK-KL 118 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~-~~~~--~----~~~~~~~~l~~~~d~~ly~~~~~~g~~~-kl 118 (934)
.+++++|++-+|.|+|+|..||+++|++..+.+-... .... . ......+|+.+ -||.||.++...|++. +.
T Consensus 68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t-~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGT-LDARLVALDAKTGKVVWSK 146 (527)
T ss_pred ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEc-CCCEEEEEECCCCCEEeec
Confidence 6789999999999999999999999999865432111 0000 0 00012356544 5889999998888774 11
Q ss_pred cc---CHHHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEecC
Q 002343 119 SS---SAEEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 119 p~---ti~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~~ 164 (934)
.. ....-+.++|.+. ||.||+|.- .-.++.+|++||+++=.+..-
T Consensus 147 ~~~~~~~~~~~tssP~v~-~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVV-KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred ccccccccccccCCcEEE-CCEEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence 11 1112356899998 778999864 457999999999999887653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00023 Score=84.32 Aligned_cols=139 Identities=24% Similarity=0.227 Sum_probs=84.3
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCChh-----------------------------HHHHHHH-----------
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----------------------------VALKEIQ----------- 518 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-----------------------------~~~~Ei~----------- 518 (934)
+.|+.+|-|.||+|...+|+.||||+....-.+ ....|+.
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 569999999999999999999999987643110 0111111
Q ss_pred ------HHHHhCCCCceeEEEEEEe-cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhccccc
Q 002343 519 ------NLIASDQHPNIVRWYGVES-DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590 (934)
Q Consensus 519 ------~ll~~l~HpNIV~l~g~~~-~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~ 590 (934)
.+-+...+..=|++=.++. -...-.|+|||.+| .+.|....
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l------------------------------- 259 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL------------------------------- 259 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH-------------------------------
Confidence 1112223333334434433 24567899998776 34443211
Q ss_pred chhhhHhhhhCCCCHHHHHHHHHHHHHH-HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCC
Q 002343 591 NTKDIELWKANGHPSAQLLKVTRDIVSG-LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661 (934)
Q Consensus 591 ~~~~~~~~~~~~l~~~~i~~i~~qIa~g-L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~ 661 (934)
+..+++.. .++..++.+ +..+-..|++|.|..|.||++..++. +.+.|||+...+.+.
T Consensus 260 --------~~~g~d~k---~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~--i~~lDfGi~g~l~~~ 318 (517)
T COG0661 260 --------KSAGIDRK---ELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGR--IVLLDFGIVGRLDPK 318 (517)
T ss_pred --------HhcCCCHH---HHHHHHHHHHHHHHHhcCccccCCCccceEEecCCc--EEEEcCcceecCCHH
Confidence 12223322 222222221 33334589999999999999987765 789999999877653
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00039 Score=79.74 Aligned_cols=159 Identities=17% Similarity=0.254 Sum_probs=110.9
Q ss_pred CCCCCeEEEEeeCCeEEEEecCCCeeeeEecCCC-ceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHH
Q 002343 45 PPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGR-PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE 123 (934)
Q Consensus 45 ~~~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~-~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~ 123 (934)
.-.++.++|.+.||.|+|+|..+|+++|+..... .-..+.+.... ...+|+.+ .||.||.++.+.|.+ +--++.+
T Consensus 65 ~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~--~G~i~~g~-~~g~~y~ld~~~G~~-~W~~~~~ 140 (370)
T COG1520 65 ADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGS--DGKIYVGS-WDGKLYALDASTGTL-VWSRNVG 140 (370)
T ss_pred EeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEe--CCeEEEec-ccceEEEEECCCCcE-EEEEecC
Confidence 4478899999999999999999999999887654 11111111111 22355554 445899998877776 4444444
Q ss_pred H-HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCC-CCCCCCCCCCCCccccCCCccccccccCCcccccc
Q 002343 124 E-YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFS-ASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (934)
Q Consensus 124 e-~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (934)
. +.-.+|++-.||.+|.++-...++.||+.||+..-++..+.. .. .+|- .|... .
T Consensus 141 ~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~----------~~~~--------~~~~~-----~ 197 (370)
T COG1520 141 GSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSL----------SIYG--------SPAIA-----S 197 (370)
T ss_pred CCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCcccc----------cccc--------Cceee-----c
Confidence 3 566777777899999999778999999999999988776431 11 0111 11111 2
Q ss_pred ceEEEEee--eEEEEEecCCCCceEEEEEee
Q 002343 202 QLVYIMRT--DYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 202 ~~i~i~Rt--dY~v~~~~~~s~~~~WN~t~~ 230 (934)
..+|++=. +..+-.+|+..|...||..+.
T Consensus 198 ~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~ 228 (370)
T COG1520 198 GTVYVGSDGYDGILYALNAEDGTLKWSQKVS 228 (370)
T ss_pred ceEEEecCCCcceEEEEEccCCcEeeeeeee
Confidence 37899876 668999999999999996554
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00013 Score=90.70 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=103.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC---eEEEecCCCceEEEe--eccccccccCCCcccccCCCCcchh
Q 002343 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQ---NVLISKDKSFCAKLS--DMGISKRLQGDMSCLTQNATGMDLQ 675 (934)
Q Consensus 601 ~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~---NILl~~d~~~~vKLs--DFGlAk~l~~~~~~~~~~~~~~~~~ 675 (934)
..++...++.+..++..||+|+|+....|.=+-.+ +-.. ++...+.++ ||+.++.+........
T Consensus 281 ~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~--~~e~~~~~sl~~~~ss~~l~d~~~~~~--------- 349 (1351)
T KOG1035|consen 281 GSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTV--DGEGVVAISLSDFDSSKPLPDNEKSFS--------- 349 (1351)
T ss_pred cccCHHHHHHHHHHHhhhHHHHHHhccceeEEeccccccccc--CccceeecchhhhcccccCCCcccchh---------
Confidence 45677889999999999999999985555444333 2222 222334555 8888877665433222
Q ss_pred hHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCccc--ccccchhhhhHHhhcCCCCCCCCchhHHHH
Q 002343 676 LVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA--IDLFSLGCILFFCITGGKHPYGESFERDAN 753 (934)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~k--sDIWSLGvILyeLltGg~~Pf~~~~~~~~~ 753 (934)
..-+..|.|||......+..+ .|+|.+|.....+..|...+-... ....
T Consensus 350 ---------------------------~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~--~~~~ 400 (1351)
T KOG1035|consen 350 ---------------------------DLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA--VPVS 400 (1351)
T ss_pred ---------------------------hcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc--chhh
Confidence 123456889998887776554 699999999999988644332111 0001
Q ss_pred HHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 754 IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 754 i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.+ ......+..++..+|+.-++++|+++.+++.|||.+....
T Consensus 401 ~l-------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~ 442 (1351)
T KOG1035|consen 401 LL-------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTD 442 (1351)
T ss_pred hh-------ccccchhhhhhhhhhcchhhhhccchhhhhhchhcccccc
Confidence 11 1111126788999999999999999999999999865443
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0011 Score=69.25 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=87.0
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCC-------------------hhHHHHHHHHHH-----HhCCCCceeEEEE
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-------------------HDVALKEIQNLI-----ASDQHPNIVRWYG 534 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-------------------~~~~~~Ei~~ll-----~~l~HpNIV~l~g 534 (934)
..||+|+.=.||. +.+.....||++.... ..+..+|+.... ....+.+|.++||
T Consensus 7 ~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred cccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 4699999999985 4555667888887655 345556665221 2345889999999
Q ss_pred EEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 535 ~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
+.+++.-.-+|+|+....- -...-+|.+++ +..+++. .+...+.
T Consensus 85 ~veT~~G~Glv~e~I~d~d----G~~s~TL~~~l------------------------------~~~~~~~-~~~~~L~- 128 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDAD----GNISPTLEDYL------------------------------KEGGLTE-ELRQALD- 128 (199)
T ss_pred EEecCCceEEEEEEEECCC----CCcCccHHHHH------------------------------HcCCccH-HHHHHHH-
Confidence 9999999999999754210 00011222332 2333443 3333333
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCC--CceEEEee
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDK--SFCAKLSD 651 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~--~~~vKLsD 651 (934)
.-.+||-+++|+.+||+|.||++.... ...+.|+|
T Consensus 129 --~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 129 --EFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred --HHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 445688899999999999999997543 23577787
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0013 Score=69.14 Aligned_cols=44 Identities=27% Similarity=0.491 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 611 i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
+...|+.++.-||+.|++|+|..|.|++++.++ +++.||+..+.
T Consensus 140 ~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~---i~iID~~~k~~ 183 (229)
T PF06176_consen 140 LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG---IRIIDTQGKRM 183 (229)
T ss_pred HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc---EEEEECccccc
Confidence 345677889999999999999999999998654 79999987654
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0008 Score=71.83 Aligned_cols=70 Identities=11% Similarity=0.027 Sum_probs=48.0
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCC--CceeEEEEEEecCCeEEEEEecccCC
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQH--PNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
..||+|..+.||+. .|..+++|....... ....+|.+ .+..+.. -.+.+.+++..+.+..++|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~-~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFD-ASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHH-HHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 46899999999973 355677888765432 33455554 4444332 23567788888888889999999983
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0008 Score=79.58 Aligned_cols=139 Identities=22% Similarity=0.241 Sum_probs=86.6
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCChhH----------------------------------------HHHHH
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV----------------------------------------ALKEI 517 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~----------------------------------------~~~Ei 517 (934)
.+.||.-+.|.|+++...+|+.||||+-...-.+. ..+|-
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 35799999999999999999999999865431100 01111
Q ss_pred H---HHHHhCCCCc------eeEEEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcc
Q 002343 518 Q---NLIASDQHPN------IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587 (934)
Q Consensus 518 ~---~ll~~l~HpN------IV~l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~ 587 (934)
+ ...+...|-+ |.++|-.+ .....|+||||+| .+.|+-++
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i---------------------------- 295 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAI---------------------------- 295 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHH----------------------------
Confidence 1 1233345555 33333322 3457899998887 45444332
Q ss_pred cccchhhhHhhhhCCCCHHHHHHHHHHHHHH-HHHHHHCCCcccCCCCCeEEEecC--CCceEEEeeccccccccC
Q 002343 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSG-LSHLHEIGLIHRDLKPQNVLISKD--KSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g-L~yLHs~gIVHRDLKP~NILl~~d--~~~~vKLsDFGlAk~l~~ 660 (934)
+..+++...+.. .+.++ ++-+-..|++|+|=.|.|||+.++ +...+.+-|||+.+.+..
T Consensus 296 -----------~~~gi~~~~i~~---~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 296 -----------DKRGISPHDILN---KLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred -----------HHcCCCHHHHHH---HHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 133444443333 33322 122235789999999999999853 456799999999987654
|
|
| >PF01011 PQQ: PQQ enzyme repeat family | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0002 Score=54.02 Aligned_cols=34 Identities=41% Similarity=0.683 Sum_probs=31.1
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCCceeec
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSS 83 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~ 83 (934)
.+++.+.||.|+|+|..||+++|+++.++++.++
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~~~ 35 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTGPPVDSS 35 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESSSGGGSC
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCCCCCccC
Confidence 5778899999999999999999999999988764
|
; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A .... |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0022 Score=68.34 Aligned_cols=136 Identities=22% Similarity=0.167 Sum_probs=90.0
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCCh---------------------------hHHHHHHHHHHHhC-CCCcee
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---------------------------DVALKEIQNLIASD-QHPNIV 530 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---------------------------~~~~~Ei~~ll~~l-~HpNIV 530 (934)
-.|..|--+.||+|...++..||||++..... .-+.+|+.+|.+.. .+-.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 36888888999999888899999998853210 01245666554432 234444
Q ss_pred EEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHH
Q 002343 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (934)
Q Consensus 531 ~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 610 (934)
+-+++. .-.||||+.+..-. + ...++.-++...+...
T Consensus 134 ~Pi~~~----~nVLvMEfIg~~g~-----p----------------------------------AP~LkDv~~e~~e~~~ 170 (268)
T COG1718 134 EPIAFR----NNVLVMEFIGDDGL-----P----------------------------------APRLKDVPLELEEAEG 170 (268)
T ss_pred Cceeec----CCeEEEEeccCCCC-----C----------------------------------CCCcccCCcCchhHHH
Confidence 555543 24699996653200 0 0011223333446677
Q ss_pred HHHHHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccC
Q 002343 611 VTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660 (934)
Q Consensus 611 i~~qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~ 660 (934)
+..++++.+.-|-. .++||.||..=|||+. ++ .+.|+|||-|.....
T Consensus 171 ~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~--~p~iID~~QaV~~~h 218 (268)
T COG1718 171 LYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DG--EPYIIDVSQAVTIDH 218 (268)
T ss_pred HHHHHHHHHHHHHHhcCcccccchhhheEEE-CC--eEEEEECccccccCC
Confidence 88888888888876 8999999999999997 33 389999998876653
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0028 Score=68.11 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=43.7
Q ss_pred ecccCc-EEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 481 IAKGSN-GTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 481 IG~Gsf-GtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
|-.|.. ..||+... ++..+.||+..........+|...+...-.+--+.+++++....+..++|||+.+|.
T Consensus 6 ~~~g~~~~~v~~~~~-~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDG-KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcC-CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 334444 67787544 346788888754422334455543222222345667888887777789999988873
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0087 Score=71.89 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCeEEEEe------eCCeEEEEecCCCeeeeEecCCCceee------------c----------------cccc-cCCC-
Q 002343 48 PDVALVAA------LDGTIHLVDTKLGKIRWSFGTGRPIYS------------S----------------YQAS-FNSN- 91 (934)
Q Consensus 48 ~~~~lvst------ldG~~~~v~~~sg~~~W~~~~~~~i~~------------~----------------~~~~-~~~~- 91 (934)
++.++|.+ .+|.|+|+|..||+++|++.+.|+-.. + .+.. ..+.
T Consensus 165 ~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~ 244 (527)
T TIGR03075 165 KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPE 244 (527)
T ss_pred CCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCC
Confidence 45666654 379999999999999999998654211 0 0000 1111
Q ss_pred CccccccCCC----Cc-----------eeEEeccccCcee----ecccCHHHH-HhcCCeee---cCC----ceEeecee
Q 002343 92 ASEFYLDVDE----DW-----------ELYFHSKRFGKMK----KLSSSAEEY-IRRMPYIS---KDG----GVTLGAMK 144 (934)
Q Consensus 92 ~~~~~l~~~~----d~-----------~ly~~~~~~g~~~----klp~ti~e~-v~~sP~~s---~Dg----~~~~G~k~ 144 (934)
..-+|++.++ ++ ||+.++.+.|+++ -+|-.+=++ +.+.|..- .|| +|..+.|.
T Consensus 245 ~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~ 324 (527)
T TIGR03075 245 TNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRN 324 (527)
T ss_pred CCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCC
Confidence 1236777655 44 7888888888885 344433334 22445433 366 67799999
Q ss_pred eEEEEEeCCCceEEEE
Q 002343 145 TSVFLVDVKSGRVVDN 160 (934)
Q Consensus 145 ~t~f~vd~~tG~~~~~ 160 (934)
--+|++|++||+.+..
T Consensus 325 G~~~vlDr~tG~~i~~ 340 (527)
T TIGR03075 325 GFFYVLDRTNGKLLSA 340 (527)
T ss_pred ceEEEEECCCCceecc
Confidence 9999999999999843
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0087 Score=62.38 Aligned_cols=38 Identities=34% Similarity=0.565 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccc
Q 002343 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655 (934)
Q Consensus 611 i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlA 655 (934)
-+.+|.+-|.-+|..||+-+|+|+.|.. ++ ||+|||.+
T Consensus 169 ~~~~~~~dl~~~~k~gI~~~Dv~~~ny~---~G----~lvDfs~~ 206 (207)
T PF13095_consen 169 DIPQMLRDLKILHKLGIVPRDVKPRNYR---GG----KLVDFSSS 206 (207)
T ss_pred HHHHHHHHHHHHHHCCeeeccCcccccc---CC----EEEecccC
Confidence 3457778888999999999999999987 43 79999964
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0041 Score=78.78 Aligned_cols=74 Identities=12% Similarity=0.196 Sum_probs=49.3
Q ss_pred eeeecccCcEEEEEEEEecC---cEEEEEEeecCC----hhHHHHHHHHHHHhCC-CCce--eEEEEEEecC---CeEEE
Q 002343 478 NKEIAKGSNGTVVLEGNYEG---RSVAVKRLVKTH----HDVALKEIQNLIASDQ-HPNI--VRWYGVESDQ---DFVYL 544 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g---~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~-HpNI--V~l~g~~~~~---~~~yL 544 (934)
.+.|+.|.++.+|+.....+ ..+++|+..... .....+|.. +++.+. |++| .+.+++|.+. +..|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~-~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQ-VLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHH-HHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 46789999999998544333 367777754321 134556766 455443 5554 8888888764 46889
Q ss_pred EEecccCC
Q 002343 545 SLERCTCS 552 (934)
Q Consensus 545 VmE~c~~s 552 (934)
|||+|+|.
T Consensus 122 VME~v~G~ 129 (822)
T PLN02876 122 IMEYLEGR 129 (822)
T ss_pred EEEecCCc
Confidence 99999984
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0063 Score=63.86 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=44.8
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCC-hhHHHHHHHHHHHhCC-C-CceeEEEEEEe---cCCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQ-H-PNIVRWYGVES---DQDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l~-H-pNIV~l~g~~~---~~~~~yLVmE~c~~ 551 (934)
.+.|+.|..+.||+....+ +.+++|...... .....+|.. ++..+. | ..+.+++.... .....+++|+++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~~~~~~~~e~~-~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPPDAAERLRREAA-VLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSHHHHHHHHHHHH-HHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCCCCHHHHHHHHH-HHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 3578999999999976666 699999875541 223334433 333221 1 14556666443 34468999999987
Q ss_pred C
Q 002343 552 S 552 (934)
Q Consensus 552 s 552 (934)
.
T Consensus 80 ~ 80 (239)
T PF01636_consen 80 R 80 (239)
T ss_dssp E
T ss_pred c
Confidence 4
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.038 Score=61.55 Aligned_cols=73 Identities=18% Similarity=0.053 Sum_probs=47.8
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecC-ChhHHHHHHHHHHHhCCC--CceeEEEEEEec---CCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQNLIASDQH--PNIVRWYGVESD---QDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~-~~~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~---~~~~yLVmE~c~~ 551 (934)
.+.||.|..+.||.-...++ .+.+|..... .......|...+...-.+ -.+.++++++.+ .+..+||||++++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 46799999999998655555 4666764332 223555666543332232 467777877654 4678999999886
|
|
| >smart00564 PQQ beta-propeller repeat | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0032 Score=45.48 Aligned_cols=29 Identities=31% Similarity=0.631 Sum_probs=26.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG 75 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~ 75 (934)
.++++++++.||.|+++|..+|+++|++.
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~~~ 33 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWTYK 33 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEEcC
Confidence 35689999999999999999999999974
|
Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0036 Score=75.58 Aligned_cols=186 Identities=18% Similarity=0.121 Sum_probs=131.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCC----------ccccccCCCCceeEEeccccCcee
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNA----------SEFYLDVDEDWELYFHSKRFGKMK 116 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~----------~~~~l~~~~d~~ly~~~~~~g~~~ 116 (934)
....+.+.+-++..|+||..||+..|+|++..||++.+++..+.-. .+.+..+.|+|..|.-+.+.++++
T Consensus 106 sdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~~~~~~v~~grt~ytv~m~d~~~~~~~wn~t~~dy~a~~~~~~~~~~~~ 185 (903)
T KOG1027|consen 106 SDGILYSGSKQDIWYLVDPKTGEIDYTFNTAEPIKQLVYLGRTNYTVTMYDKNVRGKTWNTTFGDYSAQYPSGVRGEKMS 185 (903)
T ss_pred CCCeEEecccccceEEecCCccceeEEEecCCcchhheecccceeEEecccCcccCceeeccccchhccCCCccCCceeE
Confidence 6778999999999999999999999999999999888776643321 246788999999999877777776
Q ss_pred ecccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCC-ccccCC----Ccccccc
Q 002343 117 KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENK-HVVPVD----GYEELVE 191 (934)
Q Consensus 117 klp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~ 191 (934)
-.--+--.++-+.+|-|.|= +.+|.+.+-++.++..++.-++.+.+..... .+++..... ..+... .++....
T Consensus 186 ~~~~~~~g~i~t~D~~~g~~-~~~q~~~spvv~~~~~~~~gl~~~~~~~v~~-~t~~~~~~~~~~v~~~~~~~~~~s~~~ 263 (903)
T KOG1027|consen 186 HFHSLGNGYIVTVDSESGEK-LWLQDLLSPVVALYTLFNDGLHSYPFVTVAR-ETYQINALESGTVLLNIAPTKDESPLE 263 (903)
T ss_pred EEeecCCccEEeccCcccce-eeccccCCceEEEEeeccCceeeecceehhH-HHHHHHHhhccccccccCCCcCccccc
Confidence 55555566666778877554 9999999999999999999999987654322 222211111 111100 0111111
Q ss_pred ccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEeeeeccccccc
Q 002343 192 SGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQ 239 (934)
Q Consensus 192 ~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~~a~~~~~ 239 (934)
.+. + .....+|-+-|+.+..++.-++. .||+++..-.+.+..-
T Consensus 264 s~~-~---~~~~~~l~~~~~~~~l~~~~~~v-~~~v~~~~~~~t~~~~ 306 (903)
T KOG1027|consen 264 SSL-D---FQLLPTLYVGDSSTGLYASFSLV-HQNVPLVPRAATLPLL 306 (903)
T ss_pred ccc-c---cccceeeEecCceeeEEeehhhc-ccCceeccCCCCCccc
Confidence 111 1 22355666999999999998887 9999999988877443
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.041 Score=68.54 Aligned_cols=161 Identities=12% Similarity=0.162 Sum_probs=92.2
Q ss_pred CCCeEEEEe----------eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccc-cCCCCceeEEeccccCce
Q 002343 47 EPDVALVAA----------LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYL-DVDEDWELYFHSKRFGKM 115 (934)
Q Consensus 47 ~~~~~lvst----------ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l-~~~~d~~ly~~~~~~g~~ 115 (934)
-+++++|.. -+|.|+|+|..||+++|.|..+.|...... . ....|. -.+.-|.....+.+.|.+
T Consensus 315 ~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~---~--~g~~~~~gg~n~W~~~s~D~~~glv 389 (764)
T TIGR03074 315 AGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPP---A--PGETYTRNTPNSWSVASYDEKLGLV 389 (764)
T ss_pred ECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEecCCCCcccCC---C--CCCEeccCCCCccCceEEcCCCCeE
Confidence 567788763 379999999999999999998866543210 0 111221 223444444444444333
Q ss_pred eecccCHH--HHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcccccccc
Q 002343 116 KKLSSSAE--EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESG 193 (934)
Q Consensus 116 ~klp~ti~--e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (934)
-+|..-+ ++... +|+..--+| .++++.+|++||++.=.|-.-- .-+|+=|..+ .+.+++-.
T Consensus 390 -y~ptGn~~pd~~g~--~r~~~~n~y----~~slvALD~~TGk~~W~~Q~~~----hD~WD~D~~~------~p~L~d~~ 452 (764)
T TIGR03074 390 -YLPMGNQTPDQWGG--DRTPADEKY----SSSLVALDATTGKERWVFQTVH----HDLWDMDVPA------QPSLVDLP 452 (764)
T ss_pred -EEeCCCccccccCC--ccccCcccc----cceEEEEeCCCCceEEEecccC----CccccccccC------CceEEeee
Confidence 3333211 11100 122111233 6889999999999998876521 1233333321 12223221
Q ss_pred CCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 194 VGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 194 ~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
..+. +..++||.+=.+=.+-.+|.++|+..|.+.+.
T Consensus 453 ~~~G-~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e~ 488 (764)
T TIGR03074 453 DADG-TTVPALVAPTKQGQIYVLDRRTGEPIVPVEEV 488 (764)
T ss_pred cCCC-cEeeEEEEECCCCEEEEEECCCCCEEeeceee
Confidence 1111 12247888888888999999999999988765
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.027 Score=59.62 Aligned_cols=152 Identities=17% Similarity=0.189 Sum_probs=109.5
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHHh
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~ 127 (934)
..++++.+--|.+.|||..||+++|.---|.-|-.+-=. -+..+-|-| ..|.||++..+.|.. ---|+|.|=|.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v----vgdfVV~GC-y~g~lYfl~~~tGs~-~w~f~~~~~vk 96 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV----VGDFVVLGC-YSGGLYFLCVKTGSQ-IWNFVILETVK 96 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE----ECCEEEEEE-ccCcEEEEEecchhh-eeeeeehhhhc
Confidence 467888999999999999999999997766555433100 011222333 568899998888865 67789999999
Q ss_pred cCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 128 RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 128 ~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
..|..-.|| .+|.|+..-+.+++|++|=.-++...-.+... .=| -++||. ..||.
T Consensus 97 ~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f-----------~sP------~i~~g~-------~sly~ 152 (354)
T KOG4649|consen 97 VRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTF-----------VSP------VIAPGD-------GSLYA 152 (354)
T ss_pred cceEEcCCCceEEEecCCCcEEEecccccceEEecccCCcee-----------ccc------eecCCC-------ceEEE
Confidence 999887775 78999999999999999999888865444321 101 122222 26899
Q ss_pred EeeeEEEEEecCCCC--ceEEEEEe
Q 002343 207 MRTDYVLQSTSQDSG--EVLWNVAY 229 (934)
Q Consensus 207 ~RtdY~v~~~~~~s~--~~~WN~t~ 229 (934)
.-|-=.|.++.++.+ -+.|-.|.
T Consensus 153 a~t~G~vlavt~~~~~~~~~w~~~~ 177 (354)
T KOG4649|consen 153 AITAGAVLAVTKNPYSSTEFWAATR 177 (354)
T ss_pred EeccceEEEEccCCCCcceehhhhc
Confidence 888888888888776 66665554
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.042 Score=58.49 Aligned_cols=68 Identities=18% Similarity=0.099 Sum_probs=40.0
Q ss_pred eeecccCcEEEEEEEEec--CcEEEEEEeecCChh--HHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGNYE--GRSVAVKRLVKTHHD--VALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~--g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.|..|-...+|+....+ ++.|++|........ ...+|.. ++..+ .+.-..++++.+.. .++||+++|
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~-~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G 76 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELR-IHKLLSKHGLAPKLYATFQN----GLIYEFIPG 76 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHH-HHHHHHhCCCCCeEEEEeCC----cEEEEeeCC
Confidence 567788888999865443 578889976533211 1234554 23322 23334556655432 379999987
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.001 Score=84.41 Aligned_cols=203 Identities=13% Similarity=0.030 Sum_probs=118.5
Q ss_pred HHhCCCCceeEEEEEEec--CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhh
Q 002343 521 IASDQHPNIVRWYGVESD--QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELW 598 (934)
Q Consensus 521 l~~l~HpNIV~l~g~~~~--~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (934)
.+...|+++++.+.-... ....|.++++| ..|.+...+-.....
T Consensus 1283 ~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~----------~~g~~f~iIikg~ee------------------------ 1328 (2724)
T KOG1826|consen 1283 LREAKHYLTEVDPLRIPPSESTEEYIRSLYV----------EFGKLFSIIIKGLEE------------------------ 1328 (2724)
T ss_pred hhhhhceeeecccccCCCCCChHHHHHHHHH----------HHhHHHHHHHhcccc------------------------
Confidence 344579999888775543 33567777744 445554444321111
Q ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcc
Q 002343 599 KANGHPSAQLLKVTRDIVSGLSHLHEI-----GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673 (934)
Q Consensus 599 ~~~~l~~~~i~~i~~qIa~gL~yLHs~-----gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~ 673 (934)
...+...-+.....+.+.+..-+|+. -.+|++||+-|.+|.. +..+|++++|+.+...+....
T Consensus 1329 -~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVt--ny~v~~gk~gLdKIknp~~sf--------- 1396 (2724)
T KOG1826|consen 1329 -SPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVT--NYNVKLGKGGLDKIKNPVLSF--------- 1396 (2724)
T ss_pred -CCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceec--CCcccccccccccccCchHhh---------
Confidence 11122222333344447777777754 2799999999999954 445999999999843332211
Q ss_pred hhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-
Q 002343 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA- 752 (934)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~- 752 (934)
+....+++.|++|++...-.++.++|+|+.|+-+|+.-.| ..+|-...+...
T Consensus 1397 --------------------------~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~-n~~fi~flq~~Lk 1449 (2724)
T KOG1826|consen 1397 --------------------------FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG-NAYFIFFLQPALK 1449 (2724)
T ss_pred --------------------------hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHc
Confidence 1124688899999999988999999999999999987664 444432221111
Q ss_pred HHHhhcccccccCC--CHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 753 NIVKDRKDLFLVEH--IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 753 ~i~~~~~~~~~~~~--~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.++.+.. .+..+. +.++-.+...+|-..-..||.-..++.-+.|
T Consensus 1450 giidn~t-f~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~ 1495 (2724)
T KOG1826|consen 1450 GIIDNHT-FFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHF 1495 (2724)
T ss_pred Ccccccc-cccccccCCCcccHHHHHHHHHHhhhcchhhhhcccccc
Confidence 1111111 111111 1233334444444555567776666666554
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.052 Score=55.21 Aligned_cols=126 Identities=22% Similarity=0.308 Sum_probs=74.6
Q ss_pred EeeeecccCcEEEEEEEEecCcEEEEEEeecCChhH-HHHHHHHHHHhCCCCcee-EEEEEEecCCeEEEEEecccCChh
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIV-RWYGVESDQDFVYLSLERCTCSLN 554 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~-~~~Ei~~ll~~l~HpNIV-~l~g~~~~~~~~yLVmE~c~~sL~ 554 (934)
..+.||+|.+|.||+ +.+.|..||+|+-....... ..+|.+ ++..+.-.++- ++|.+-.+ .+.|||..|
T Consensus 26 v~~~L~KG~~s~Vyl-~~~~~~~~a~Kvrr~ds~r~~l~kEak-iLeil~g~~~~p~vy~yg~~----~i~me~i~G--- 96 (201)
T COG2112 26 VEKELAKGTTSVVYL-GEWRGGEVALKVRRRDSPRRNLEKEAK-ILEILAGEGVTPEVYFYGED----FIRMEYIDG--- 96 (201)
T ss_pred hhhhhhcccccEEEE-eeccCceEEEEEecCCcchhhHHHHHH-HHHHhhhcCCCceEEEechh----hhhhhhhcC---
Confidence 356899999999998 56777799999865554433 344444 55555444432 45554332 345995544
Q ss_pred hhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC-
Q 002343 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK- 633 (934)
Q Consensus 555 dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK- 633 (934)
-.|.++-.. .. ++-+..++..---|-..||-|..|.
T Consensus 97 -------~~L~~~~~~--------------------------------~~----rk~l~~vlE~a~~LD~~GI~H~El~~ 133 (201)
T COG2112 97 -------RPLGKLEIG--------------------------------GD----RKHLLRVLEKAYKLDRLGIEHGELSR 133 (201)
T ss_pred -------cchhhhhhc--------------------------------cc----HHHHHHHHHHHHHHHHhccchhhhcC
Confidence 233221110 01 1222344555334556899999997
Q ss_pred CC-eEEEecCCCceEEEeecccccc
Q 002343 634 PQ-NVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 634 P~-NILl~~d~~~~vKLsDFGlAk~ 657 (934)
|. ||++. ++. +.|+||--|+.
T Consensus 134 ~~k~vlv~-~~~--~~iIDFd~At~ 155 (201)
T COG2112 134 PWKNVLVN-DRD--VYIIDFDSATF 155 (201)
T ss_pred CceeEEec-CCc--EEEEEccchhh
Confidence 44 55553 433 88999998874
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.047 Score=63.08 Aligned_cols=72 Identities=24% Similarity=0.246 Sum_probs=47.4
Q ss_pred eeeecccCcEEEEEEEEecC-cEEEEEEeec------C----ChhHHHHHHHHHHH--hCCCCceeEEEEEEecCCeEEE
Q 002343 478 NKEIAKGSNGTVVLEGNYEG-RSVAVKRLVK------T----HHDVALKEIQNLIA--SDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g-~~VAVK~l~~------~----~~~~~~~Ei~~ll~--~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.||.|.+..||+....+| +.|.||.-.. . ..+....|...+.. ...-.++.+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 35799999999999876666 5899997431 1 11233444433322 2233567888887 4456789
Q ss_pred EEecccC
Q 002343 545 SLERCTC 551 (934)
Q Consensus 545 VmE~c~~ 551 (934)
|||+++.
T Consensus 109 VME~L~~ 115 (401)
T PRK09550 109 VMEDLSD 115 (401)
T ss_pred EEecCCC
Confidence 9999875
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=59.87 Aligned_cols=96 Identities=19% Similarity=0.146 Sum_probs=68.6
Q ss_pred HHHhCCC-CceeEEEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHh
Q 002343 520 LIASDQH-PNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (934)
Q Consensus 520 ll~~l~H-pNIV~l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (934)
++..+.+ +++.+++|+|-+ ++|.|+.+. ++... .+.+.++
T Consensus 12 ll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~----~~~l~~~------------------------------ 53 (188)
T PF12260_consen 12 LLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGI----YRPLSQF------------------------------ 53 (188)
T ss_pred HHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccc----ccccccc------------------------------
Confidence 5555655 699999999943 568886553 22211 1111111
Q ss_pred hhhCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCCCeEEEecCCCceEEEeeccccccc
Q 002343 598 WKANGHPSAQLLKVTRDIVSGLSHLHE---IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658 (934)
Q Consensus 598 ~~~~~l~~~~i~~i~~qIa~gL~yLHs---~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l 658 (934)
...++..+.+|+.+++..+++|++ ..+.-+|++|+|+-++.+++ +|+.|...+...
T Consensus 54 ---~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~--lk~iDld~v~~~ 112 (188)
T PF12260_consen 54 ---LQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGR--LKLIDLDDVFVE 112 (188)
T ss_pred ---cccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCc--EEEEechhcchh
Confidence 123678899999999999999997 35888999999999986655 999999876543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.077 Score=59.21 Aligned_cols=30 Identities=37% Similarity=0.510 Sum_probs=25.5
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccc
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk 656 (934)
.+++|+|+.+.||+++.++ .+.|.||+.+.
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~--~~~vIDfd~~~ 216 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDS--VKGVIDFYFAC 216 (307)
T ss_pred CccCCCCCCcCcEEEECCc--eEEEeeccccc
Confidence 5899999999999997664 35799999875
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.061 Score=60.20 Aligned_cols=31 Identities=32% Similarity=0.432 Sum_probs=24.9
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
.++||+|+.|.|||++.++ ..-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~--~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDR--LSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCc--eEEEEecccccC
Confidence 4899999999999997442 247999998753
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.044 Score=58.58 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=24.5
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
.+++|+|+.|.|||++.++ ..-|.||+.|..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~--i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGR--LSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCC--EEEEEeCcccCc
Confidence 3589999999999996432 356999998754
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.098 Score=57.78 Aligned_cols=73 Identities=10% Similarity=-0.067 Sum_probs=42.4
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCC--CceeEEEEE------EecCCeEEEEEecc
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQH--PNIVRWYGV------ESDQDFVYLSLERC 549 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~H--pNIV~l~g~------~~~~~~~yLVmE~c 549 (934)
.+.|..|....+|+... ++..+++|+......+....|+. ++..+.+ -.+.+.+.. ....+..+++++++
T Consensus 19 i~~i~~G~~n~~y~v~~-~~~~~vLr~~~~~~~~~~~~e~~-~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 19 FEGISAGIENTNYFVTT-DSGRYVLTLFEKVSAEELPFFLA-LLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred eecccCccccceEEEEe-CCCcEEEEEcCCCChHhccHHHH-HHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 45677888788998644 44578889876432233334443 3333321 125555442 12345678999999
Q ss_pred cCC
Q 002343 550 TCS 552 (934)
Q Consensus 550 ~~s 552 (934)
+|.
T Consensus 97 ~G~ 99 (296)
T cd05153 97 AGE 99 (296)
T ss_pred CCC
Confidence 874
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.071 Score=56.16 Aligned_cols=108 Identities=22% Similarity=0.258 Sum_probs=88.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEecc-ccCcee--ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSK-RFGKMK--KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~-~~g~~~--klp~ti~ 123 (934)
++...|.||.|||+++.|.+||+.-=++....++.|.. ..+..-+|--...+++-+++. .+|.+| |+|.+++
T Consensus 154 eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlE-----vs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~ 228 (334)
T KOG0278|consen 154 EDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLE-----VSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVE 228 (334)
T ss_pred cCceEEeeccCCceEEEEeccCcEEEEEecCCCCccee-----eccCCCEEEEecCceeEEeccccccceeeccCccccc
Confidence 68889989999999999999999999999988886641 112345777778888888886 888777 9999998
Q ss_pred HHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 124 EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 124 e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
++-.--+-++++.|...=-+|.-|=.||+-+-.|.+
T Consensus 229 ----SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nk 264 (334)
T KOG0278|consen 229 ----SASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNK 264 (334)
T ss_pred ----cccccCCCceEEecCcceEEEEEeccCCceeeeccc
Confidence 555555558888999999999999999999999743
|
|
| >KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.032 Score=64.84 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=50.0
Q ss_pred ccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhc------------ccccccCCCHHHHHHHHHcccCCCCCCcCHH
Q 002343 722 RAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR------------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789 (934)
Q Consensus 722 ~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~------------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~ 789 (934)
+|+||||+|.++.++.-|....-.-...+...++... ......+......++..+|+-..|..||...
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence 3999999999999998873322111111111111110 0112223334567899999999999999999
Q ss_pred HHHcCCCCCC
Q 002343 790 NVLNHPFFWT 799 (934)
Q Consensus 790 evL~HPff~~ 799 (934)
++.+|+-|..
T Consensus 190 ~~~k~~i~~e 199 (725)
T KOG1093|consen 190 ELSKRCSFTE 199 (725)
T ss_pred HHhcCccHHH
Confidence 9999998843
|
|
| >KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.29 Score=52.08 Aligned_cols=156 Identities=21% Similarity=0.255 Sum_probs=101.6
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEecc-ccCcee--ecccCHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSK-RFGKMK--KLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~-~~g~~~--klp~ti~e 124 (934)
++.+++.--.|.||+++..||+..|.|-.-..+.+.-|...+ ..-+|. ...|+.+|+++. .+|-+- |-+=++-
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~--~glIyc-gshd~~~yalD~~~~~cVykskcgG~~f- 138 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFD--GGLIYC-GSHDGNFYALDPKTYGCVYKSKCGGGTF- 138 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCC--CceEEE-ecCCCcEEEecccccceEEecccCCcee-
Confidence 567788899999999999999999999988888775443222 222342 347889999886 444332 4455555
Q ss_pred HHhcCCeeec-CCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccce
Q 002343 125 YIRRMPYISK-DGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (934)
Q Consensus 125 ~v~~sP~~s~-Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (934)
+|||+-. ||-+|.-.-.-.+..|.++++. .+.+|.-++.. | =.+...-..+-
T Consensus 139 ---~sP~i~~g~~sly~a~t~G~vlavt~~~~~------------~~~~w~~~~~~--P----------iF~splcv~~s 191 (354)
T KOG4649|consen 139 ---VSPVIAPGDGSLYAAITAGAVLAVTKNPYS------------STEFWAATRFG--P----------IFASPLCVGSS 191 (354)
T ss_pred ---ccceecCCCceEEEEeccceEEEEccCCCC------------cceehhhhcCC--c----------cccCceeccce
Confidence 9999999 9999987666666666665552 23344333320 0 00000001235
Q ss_pred EEEEeeeEEEEEecCCCCceEEEEEeeeeccccc
Q 002343 204 VYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFR 237 (934)
Q Consensus 204 i~i~RtdY~v~~~~~~s~~~~WN~t~~~~~a~~~ 237 (934)
+-|+--|=+|+++|+ +|..-| .++.=.+-++
T Consensus 192 v~i~~VdG~l~~f~~-sG~qvw--r~~t~GpIf~ 222 (354)
T KOG4649|consen 192 VIITTVDGVLTSFDE-SGRQVW--RPATKGPIFM 222 (354)
T ss_pred EEEEEeccEEEEEcC-CCcEEE--eecCCCceec
Confidence 778888999999995 999999 5554444443
|
|
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.17 Score=56.05 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=25.1
Q ss_pred CCcccCCCCCeEEEecC----CCceEEEeecccccc
Q 002343 626 GLIHRDLKPQNVLISKD----KSFCAKLSDMGISKR 657 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d----~~~~vKLsDFGlAk~ 657 (934)
.++|+|+.|.|||++.+ + .+.++||..|..
T Consensus 180 ~lcH~Dl~~~Nil~~~~~~~~~--~i~lIDwEya~~ 213 (302)
T cd05156 180 VFCHNDLQEGNILLLNPSSETK--KLVLIDFEYASY 213 (302)
T ss_pred eEEecCCCcCeEEecCCCCCCC--cEEEEeeCCCCC
Confidence 58999999999999763 4 378999998863
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 934 | ||||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 9e-81 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 2e-80 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 5e-80 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-79 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 3e-63 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-14 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 1e-12 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-12 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-12 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 2e-12 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-12 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 2e-12 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-12 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-12 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-12 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-12 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-12 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-12 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-12 | ||
| 2jam_B | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 4e-12 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 5e-12 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 6e-12 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 9e-12 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 1e-11 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-11 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 2e-11 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 2e-11 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 3e-11 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 3e-11 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 3e-11 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 3e-11 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-11 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-11 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 6e-11 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 6e-11 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 8e-11 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 8e-11 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 8e-11 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 9e-11 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-10 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-10 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-10 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-10 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-10 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-10 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-10 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 4e-10 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 4e-10 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 7e-10 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-09 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-09 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 6e-09 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 8e-09 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 9e-09 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 9e-09 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 1e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-08 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 1e-08 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-08 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 1e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-08 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 2e-08 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-08 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-08 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-08 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 2e-08 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-08 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 2e-08 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 2e-08 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 2e-08 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-08 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-08 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-08 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-08 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-08 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-08 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-08 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-08 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-08 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 2e-08 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-08 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-08 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-08 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-08 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-08 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-08 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 3e-08 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-08 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-08 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 3e-08 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-08 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-08 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-08 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 3e-08 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-08 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-08 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-08 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 3e-08 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 4e-08 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 4e-08 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-08 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 4e-08 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-08 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 4e-08 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-08 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 4e-08 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 4e-08 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 5e-08 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 5e-08 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-08 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 6e-08 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 6e-08 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-08 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 7e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 7e-08 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 7e-08 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 8e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 8e-08 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 8e-08 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 8e-08 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 9e-08 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 9e-08 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 9e-08 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 9e-08 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 9e-08 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 9e-08 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 9e-08 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-07 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-07 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-07 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 1e-07 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-07 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-07 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-07 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 1e-07 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-07 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 2e-07 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-07 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-07 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-07 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 2e-07 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 2e-07 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 2e-07 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 2e-07 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-07 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-07 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 2e-07 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-07 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-07 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 2e-07 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 3e-07 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 3e-07 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-07 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-07 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-07 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-07 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-07 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 3e-07 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-07 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 3e-07 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 3e-07 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-07 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-07 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-07 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 4e-07 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 4e-07 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 4e-07 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-07 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 4e-07 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 4e-07 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-07 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 4e-07 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 4e-07 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 4e-07 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 4e-07 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 4e-07 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 4e-07 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 4e-07 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 5e-07 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 5e-07 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 5e-07 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 5e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 6e-07 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 6e-07 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 6e-07 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 7e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 7e-07 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 7e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 7e-07 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 8e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 8e-07 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 8e-07 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 8e-07 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 9e-07 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 9e-07 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 9e-07 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 9e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 9e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 9e-07 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 9e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-06 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-06 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-06 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-06 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 1e-06 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-06 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-06 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-06 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-06 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-06 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 1e-06 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 1e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-06 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-06 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 1e-06 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-06 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 1e-06 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-06 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-06 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-06 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-06 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 1e-06 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 1e-06 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-06 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-06 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-06 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 2e-06 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-06 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 2e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-06 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-06 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 2e-06 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-06 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-06 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-06 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-06 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-06 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 2e-06 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 2e-06 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 3e-06 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 3e-06 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 3e-06 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 3e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 3e-06 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-06 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 3e-06 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 3e-06 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 3e-06 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 4e-06 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-06 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-06 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 4e-06 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 4e-06 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 4e-06 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-06 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 4e-06 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 4e-06 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 5e-06 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 5e-06 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 5e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-06 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 5e-06 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 5e-06 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-06 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 5e-06 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 5e-06 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 6e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-06 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 6e-06 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-06 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 6e-06 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-06 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 6e-06 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 6e-06 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 6e-06 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 6e-06 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 6e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 7e-06 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 7e-06 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 7e-06 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 7e-06 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 7e-06 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 7e-06 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 7e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 8e-06 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 8e-06 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 8e-06 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 8e-06 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 9e-06 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 9e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 9e-06 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-05 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-05 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-05 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-05 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 1e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-05 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 1e-05 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-05 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 1e-05 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 1e-05 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-05 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-05 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-05 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-05 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-05 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-05 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 1e-05 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-05 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 1e-05 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-05 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 2e-05 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-05 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-05 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-05 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 2e-05 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-05 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-05 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 3e-05 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 3e-05 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-05 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 3e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-05 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 3e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 3e-05 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 3e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-05 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 3e-05 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 4e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 4e-05 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 4e-05 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 4e-05 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 4e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-05 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 4e-05 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-05 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 4e-05 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 4e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-05 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 4e-05 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 5e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 5e-05 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 5e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 5e-05 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 5e-05 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 5e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 5e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 6e-05 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 6e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 6e-05 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 6e-05 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 6e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 6e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-05 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-05 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 6e-05 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 6e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-05 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 6e-05 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 6e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 6e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 6e-05 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 7e-05 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 7e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 7e-05 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 7e-05 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 7e-05 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 7e-05 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 7e-05 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 7e-05 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 7e-05 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 8e-05 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-05 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 8e-05 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 8e-05 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 8e-05 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 8e-05 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 8e-05 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 8e-05 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 8e-05 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 8e-05 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 8e-05 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 8e-05 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 8e-05 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 8e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 8e-05 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 8e-05 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 8e-05 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 8e-05 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 8e-05 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 8e-05 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 8e-05 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 8e-05 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 8e-05 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 8e-05 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 8e-05 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 8e-05 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 8e-05 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 8e-05 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 8e-05 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 9e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 9e-05 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 9e-05 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 9e-05 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 9e-05 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 9e-05 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 9e-05 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 9e-05 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 9e-05 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 9e-05 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 9e-05 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 9e-05 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 9e-05 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 9e-05 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 9e-05 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 9e-05 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 1e-04 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 1e-04 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 1e-04 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-04 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-04 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 1e-04 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-04 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-04 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 1e-04 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 1e-04 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 1e-04 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-04 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 1e-04 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-04 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 1e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-04 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 1e-04 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 1e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-04 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-04 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-04 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 1e-04 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 1e-04 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-04 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 1e-04 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 1e-04 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-04 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 1e-04 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 1e-04 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 1e-04 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 1e-04 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 1e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-04 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 1e-04 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 1e-04 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 1e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-04 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 1e-04 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 1e-04 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 1e-04 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 1e-04 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 1e-04 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 1e-04 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-04 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 1e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 1e-04 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 1e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-04 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 1e-04 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 1e-04 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 1e-04 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-04 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-04 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-04 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 1e-04 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-04 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-04 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-04 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-04 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-04 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 2e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 2e-04 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-04 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 2e-04 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 2e-04 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 2e-04 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-04 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-04 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-04 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-04 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-04 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-04 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-04 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 2e-04 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-04 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-04 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-04 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-04 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 2e-04 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-04 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-04 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-04 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-04 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-04 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-04 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-04 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 2e-04 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-04 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-04 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-04 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-04 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 2e-04 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-04 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-04 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-04 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 2e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-04 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 2e-04 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 2e-04 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-04 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 2e-04 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-04 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-04 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-04 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-04 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 2e-04 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-04 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-04 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-04 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 2e-04 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 2e-04 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 2e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-04 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-04 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-04 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-04 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 2e-04 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-04 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-04 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-04 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 2e-04 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 2e-04 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-04 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-04 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-04 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-04 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 2e-04 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-04 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 2e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-04 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 2e-04 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 2e-04 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 2e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-04 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-04 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 2e-04 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-04 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 2e-04 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 2e-04 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 2e-04 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-04 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 2e-04 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 2e-04 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 2e-04 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-04 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 2e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-04 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-04 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 3e-04 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 3e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 3e-04 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 3e-04 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-04 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 3e-04 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-04 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-04 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-04 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 3e-04 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 3e-04 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-04 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 3e-04 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 3e-04 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-04 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 3e-04 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-04 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 3e-04 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-04 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 3e-04 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 3e-04 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-04 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 3e-04 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 3e-04 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-04 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 3e-04 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-04 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 3e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 3e-04 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-04 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 3e-04 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 3e-04 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 3e-04 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 3e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 3e-04 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-04 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 3e-04 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-04 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 3e-04 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 3e-04 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 3e-04 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 3e-04 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 3e-04 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 3e-04 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-04 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-04 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-04 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-04 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 3e-04 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-04 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 4e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-04 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 4e-04 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 4e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 4e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 4e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 4e-04 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 4e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-04 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 4e-04 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-04 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-04 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-04 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 4e-04 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-04 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 4e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 4e-04 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 4e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 5e-04 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 5e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 5e-04 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 5e-04 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 5e-04 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 5e-04 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 6e-04 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 6e-04 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 6e-04 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 6e-04 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 6e-04 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-04 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 6e-04 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 6e-04 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 6e-04 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 6e-04 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 6e-04 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 6e-04 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 6e-04 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 7e-04 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 7e-04 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 7e-04 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 7e-04 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 7e-04 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 7e-04 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 7e-04 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-04 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 8e-04 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 8e-04 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 8e-04 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 8e-04 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 8e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 8e-04 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 8e-04 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 8e-04 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-04 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-04 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 8e-04 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 8e-04 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 9e-04 |
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 446 bits (1150), Expect = e-149
Identities = 166/485 (34%), Positives = 253/485 (52%), Gaps = 89/485 (18%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN 528
+ + LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPN 70
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++R+Y E+ F+Y++LE C +L DL+ E N +++ L E
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLV--------ESKNVSDENLKLQKEYNPI---- 118
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC-- 646
+ R I SG++HLH + +IHRDLKPQN+L+S F
Sbjct: 119 ---------------------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTAD 157
Query: 647 ---------AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
+SD G+ K+L S N
Sbjct: 158 QQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP------------------------- 192
Query: 698 LFFTVGYGSSGWQAPEQLLQG-------RQTRAIDLFSLGCILFFCITGGKHPYGESFER 750
G+SGW+APE L + R TR+ID+FS+GC+ ++ ++ GKHP+G+ + R
Sbjct: 193 ------SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 751 DANIVK------DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRL 804
++NI++ + K L I EA DL ++++D +P RP A VL HP FW +L
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKL 306
Query: 805 SFLRDVSDRVELEDRESDSKLLRALEGIA-LVALNGKWDEKMETKFIENIGRYRRYKYDN 863
FL VSDR+E+E+R+ S LL + + V +G W K + F++N+ RYR+Y
Sbjct: 307 EFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSK 366
Query: 864 VRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEE 923
+ DLLR +RNK +HF +LP+DI EL+G P+GFY+YF+ RFP LLI VY ++ ++
Sbjct: 367 LMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQ 426
Query: 924 VFHKY 928
+ ++
Sbjct: 427 ILREF 431
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-147
Identities = 141/481 (29%), Positives = 225/481 (46%), Gaps = 85/481 (17%)
Query: 459 TDLIDDRVDGRRIGKL-VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEI 517
D D+ +GK+ + G+ GT+V G ++ R VAVKR++ A +E+
Sbjct: 9 QDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREV 68
Query: 518 QNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL 577
Q L SD+HPN++R++ E D+ F Y+++E C +L + +
Sbjct: 69 QLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYV-------------------- 108
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
K H + + + + SGL+HLH + ++HRDLKP N+
Sbjct: 109 -------------------EQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNI 149
Query: 638 LIS---KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694
LIS A +SD G+ K+L ++ +
Sbjct: 150 LISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV----------------------- 186
Query: 695 FGVLFFTVGYGSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
G+ GW APE L + T +D+FS GC+ ++ I+ G HP+G+S +R
Sbjct: 187 ---------PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237
Query: 752 ANIVKDRKDLFLVE----HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 807
ANI+ L + A +L +++ +P RP A++VL HPFFW+ + +L F
Sbjct: 238 ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFF 297
Query: 808 RDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDL 867
+DVSDR+E E D +++ LE + W E + ++ ++R YK +VRDL
Sbjct: 298 QDVSDRIEKESL--DGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDL 355
Query: 868 LRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHK 927
LR +RNK +H+RELP +++E LG+ P+ F YF+ RFP LL Y C E +F
Sbjct: 356 LRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRA-MELCSHERLFQP 414
Query: 928 Y 928
Y
Sbjct: 415 Y 415
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 9e-42
Identities = 71/327 (21%), Positives = 104/327 (31%), Gaps = 89/327 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ GS G V +GR AVKR + L E+ + QHP VR
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ +YL E C SL S E
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPE-------------------------- 156
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
AQ+ RD + L+HLH GL+H D+KP N+ + KL D
Sbjct: 157 -------------AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCKLGDF 201
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+ L + + G + AP
Sbjct: 202 GLLVELGTAGAGEV-----------------------QE-------------GDPRYMAP 225
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKDLFLVEHI-PEA 770
E LLQG A D+FSLG + + P GE +++ + + + E
Sbjct: 226 E-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ---LRQGYLPPEFTAGLSSEL 281
Query: 771 VDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ +L+P+P LR A+ +L P
Sbjct: 282 RSVLVMMLEPDPKLRATAEALLALPVL 308
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 5e-36
Identities = 61/329 (18%), Positives = 113/329 (34%), Gaps = 82/329 (24%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV-E 536
+ I G G V + +G++ +KR VK +++ A +E+ +A H NIV + G +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKR-VKYNNEKAEREV-KALAKLDHVNIVHYNGCWD 74
Query: 537 SDQDFVYLSLERCTCSLNDLIYVL-----SGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
S + + S +++ G+ E+ + +++ L++
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDK----------- 121
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
L++ I G+ ++H LI+RDLKP N+ + K K+ D
Sbjct: 122 --------------VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGD 165
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG--YGSSGW 709
G+ L+ D + G +
Sbjct: 166 FGLVTSLKNDGKRTR----------------------------------SKGTLR----Y 187
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE 769
+PEQ+ + +DL++LG IL + FE R + +
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTA----FETSKFFTDLRDGIISDIFDKK 243
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
L +LL P+ RP +L W
Sbjct: 244 EKTLLQKLLSKKPEDRPNTSEILRTLTVW 272
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 65/347 (18%), Positives = 122/347 (35%), Gaps = 57/347 (16%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYG 534
+ + +G G V + + + A+KR+ + ++A +++ +A +HP IVR++
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP------- 587
+ E L D S ++A ++ +
Sbjct: 72 AWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSS 131
Query: 588 -------VME--NTKDIELWKANG-----HPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633
M+ ++++ W L + I + LH GL+HRDLK
Sbjct: 132 PKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLK 191
Query: 634 PQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693
P N+ + D K+ D G+ + D T
Sbjct: 192 PSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTP----------------------- 226
Query: 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN 753
T G+ + +PEQ+ + +D+FSLG ILF + + + ER
Sbjct: 227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL----YSFSTQMERVRI 282
Query: 754 IVKDRKDLF---LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
I R F + P+ + +L P+P RP+A +++ + F
Sbjct: 283 ITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-34
Identities = 61/340 (17%), Positives = 111/340 (32%), Gaps = 98/340 (28%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIA-----SDQHPNIVRW 532
K+I G + V N + + A+K + D L +N IA I+R
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
Y E ++Y+ +E LN + S + E +
Sbjct: 75 YDYEITDQYIYMVMECGNIDLNSWL-KKKKSIDP------------WERK---------- 111
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
++++ + +H+ G++H DLKP N LI KL D
Sbjct: 112 -----------------SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDF 151
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GI+ ++Q D S++ + G+ + P
Sbjct: 152 GIANQMQPDT-----------------TSVVKDSQV----------------GTVNYMPP 178
Query: 713 EQLLQ-----------GRQTRAIDLFSLGCILFFCITGGKHPYG---ESFERDANIVKDR 758
E + + + D++SLGCIL++ G K P+ + I+
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPN 237
Query: 759 KDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
++ + + D+ L +P R +L HP+
Sbjct: 238 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 9e-34
Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 106/349 (30%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
++I G G+V +G A+KR K AL+E+ QH ++VR+
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ ++ D + + E Y GS + ++ + + E ++
Sbjct: 77 FSAWAEDDHMLIQNE----------YCNGGSLADAISENYRIMSYFKEAELK-------- 118
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD---------- 642
+ + GL ++H + L+H D+KP N+ IS+
Sbjct: 119 -----------------DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 161
Query: 643 -------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695
K+ D+G R+
Sbjct: 162 DEDDWASNKVMFKIGDLGHVTRISSPQVEE------------------------------ 191
Query: 696 GVLFFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPY--GESFERD 751
G S + A E +LQ D+F+L + C G + G+ +
Sbjct: 192 ---------GDSRFLANE-VLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--- 237
Query: 752 ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800
I + R E +L ++ P+P+ RP A ++ H +A
Sbjct: 238 HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-33
Identities = 77/336 (22%), Positives = 118/336 (35%), Gaps = 50/336 (14%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNI 529
I +GS G V + N A+K + K + E++ + HPNI
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNI 90
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
R Y V D+ ++ L +E C L D + V + + + +
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ + + R I S L +LH G+ HRD+KP+N L S +KSF K
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L D G+SK + T G+
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTT----------------KA---------------GTPY 239
Query: 709 WQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKDLFLVE 765
+ APE L + D +S G +L + G P G + + V ++K F
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM-GAVPFPGVNDADTISQVLNKKLCFENP 298
Query: 766 ---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ P A DL + LL+ N D R A L HP+
Sbjct: 299 NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-33
Identities = 61/340 (17%), Positives = 113/340 (33%), Gaps = 98/340 (28%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIA-----SDQHPNIVRW 532
K+I G + V N + + A+K + D L +N IA I+R
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
Y E ++Y+ +E LN + S + E +
Sbjct: 94 YDYEITDQYIYMVMECGNIDLNSWL-KKKKSIDP------------WERK---------- 130
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
++++ + +H+ G++H DLKP N LI KL D
Sbjct: 131 -----------------SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDF 170
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GI+ ++Q D S++ + G+ + P
Sbjct: 171 GIANQMQPDT-----------------TSVVKDSQV----------------GTVNYMPP 197
Query: 713 EQLLQ-----------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVKDR 758
E + + + D++SLGCIL++ G K P+ + + + I+
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPN 256
Query: 759 KDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
++ + + D+ L +P R +L HP+
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-33
Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 99/347 (28%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV--ALKEIQNLIASDQHPNIVRWYGV 535
+ +G+ G VV + R A+K++ T + L E+ L+AS H +VR+Y
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-MLLASLNHQYVVRYYAA 70
Query: 536 ESDQD-------------FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
++ +++ +E C +L DLI+ + + +
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD-------------- 116
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
+ ++ R I+ LS++H G+IHRDLKP N+ I +
Sbjct: 117 -------------------------EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
++ K+ D G++K + + L ++ + L S +
Sbjct: 152 SRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI------------------ 191
Query: 702 VGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKD 760
G++ + A E L G ID++SLG I F I F V K
Sbjct: 192 ---GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--------FSTGMERVNILKK 240
Query: 761 LFLVEHI----------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L V + L+D +P+ RP A+ +LN +
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 131 bits (330), Expect = 5e-33
Identities = 68/432 (15%), Positives = 133/432 (30%), Gaps = 130/432 (30%)
Query: 387 YHSKQVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSH 446
+H + +T K ++ + T + +K + V
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISV-------- 53
Query: 447 ITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLV 506
G + + ++IG G + V N + + A+K +
Sbjct: 54 ---KGRIYSI-----------LKQIGS----------GGSSKVFQVLNEKKQIYAIKYVN 89
Query: 507 KTHHD-VALKEIQNLIA-----SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVL 560
D L +N IA I+R Y E ++Y+ +E LN +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL-KK 148
Query: 561 SGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620
S + E + ++++ +
Sbjct: 149 KKSIDP------------WERK---------------------------SYWKNMLEAVH 169
Query: 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680
+H+ G++H DLKP N LI KL D GI+ ++Q D
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDT-----------------T 209
Query: 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-----------QGRQTRAIDLFSL 729
S++ + G+ + PE + + + + D++SL
Sbjct: 210 SVVKDSQV----------------GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 730 GCILFFCITGGKHPYGESFERDA---NIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLR 785
GCIL++ G K P+ + + + I+ ++ + + D+ L +P R
Sbjct: 254 GCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 786 PKAQNVLNHPFF 797
+L HP+
Sbjct: 313 ISIPELLAHPYV 324
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 8e-33
Identities = 76/327 (23%), Positives = 124/327 (37%), Gaps = 86/327 (26%)
Query: 481 IAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVE 536
+ KG+ G V + +A+K + + + L +H NIV++ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKE-IPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 537 SDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI 595
S+ F+ + +E+ SL+ L+ G ++ NE I
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKD------------NEQTIGFY--------- 127
Query: 596 ELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655
T+ I+ GL +LH+ ++HRD+K NVLI+ S K+SD G S
Sbjct: 128 ----------------TKQILEGLKYLHDNQIVHRDIKGDNVLIN-TYSGVLKISDFGTS 170
Query: 656 KRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQL 715
KRL G C F G+ + APE +
Sbjct: 171 KRLAGINPCTET-------------------------FT----------GTLQYMAPEII 195
Query: 716 LQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVKDRKDLFLVEHI-PE 769
+G + +A D++SLGC + T GK P+ E E A + + + E + E
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE 254
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPF 796
A + +P+PD R A ++L F
Sbjct: 255 AKAFILKCFEPDPDKRACANDLLVDEF 281
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 61/323 (18%), Positives = 102/323 (31%), Gaps = 79/323 (24%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVES 537
+ +GS G V + + G AVK+ V+ ++E+ A P IV YG
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKK-VRLE-VFRVEEL-VACAGLSSPRIVPLYGAVR 120
Query: 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597
+ +V + +E + GS + + + L E R
Sbjct: 121 EGPWVNIFME----------LLEGGSLGQLI----KQMGCLPEDRAL------------- 153
Query: 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
+ GL +LH ++H D+K NVL+S D S L D G +
Sbjct: 154 ------------YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRA-ALCDFGHALC 200
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ 717
LQ D + TG + G+ APE ++
Sbjct: 201 LQPDGLGKS-LLTGDYIP-----------------------------GTETHMAPEVVMG 230
Query: 718 GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLF-LVEHI-PEAVDL 773
+D++S C++ + G HP+ + F I + + + P
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLN-GCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQA 289
Query: 774 FTRLLDPNPDLRPKAQNVLNHPF 796
L P R A +
Sbjct: 290 IQEGLRKEPVHRASAMELRRKVG 312
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 4e-32
Identities = 64/341 (18%), Positives = 121/341 (35%), Gaps = 90/341 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWY 533
+ + +G G V + + + A+KR+ + ++ ++E++ +A +HP IVR++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK-ALAKLEHPGIVRYF 69
Query: 534 GVESDQD------------FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
+++ ++Y+ ++ C +L D + + + E
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-------------NGRCTIEERE 116
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS 640
L + I + LH GL+HRDLKP N+ +
Sbjct: 117 RS------------------------VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
D K+ D G+ + D T
Sbjct: 153 MDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYARH----------------------- 187
Query: 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF-FCITGGKHPYGESFERDANIVKDRK 759
T G+ + +PEQ+ + +D+FSLG ILF +P+ ER + R
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----YPFSTQMERVRTLTDVRN 242
Query: 760 DLF---LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F + P + +L P+P RP+A N++ + F
Sbjct: 243 LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 62/334 (18%), Positives = 119/334 (35%), Gaps = 98/334 (29%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
++I +GS G +L + +GR +K + + + +E+ ++A+ +HPNIV++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREV-AVLANMKHPNIVQY 88
Query: 533 YGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ +Y+ ++ C L I Q L E
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRI-------------NAQKGVLFQE----------- 124
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
Q+L I L H+H+ ++HRD+K QN+ ++KD + +L D
Sbjct: 125 --------------DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--VQLGD 168
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
GI++ L + G+ + +
Sbjct: 169 FGIARVLNSTVELAR----------------------------------AC-IGTPYYLS 193
Query: 712 PEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPY-GESFER-DANIVKDRKDLFLVEHIP 768
PE + + + D+++LGC+L+ T KH + S + I+ +
Sbjct: 194 PE-ICENKPYNNKSDIWALGCVLYELCT-LKHAFEAGSMKNLVLKIISGS-----FPPVS 246
Query: 769 -----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ L ++L NP RP ++L F
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-30
Identities = 58/330 (17%), Positives = 114/330 (34%), Gaps = 86/330 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVR 531
K+I +G V +G VA+K++ +KEI +L+ HPN+++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIK 96
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+Y + + + + LE +G + ++ L+ E +
Sbjct: 97 YYASFIEDNELNIVLE----------LADAGDLSRMIKHFKKQKRLIPERTV-------- 138
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
K + S L H+H ++HRD+KP NV I+ KL D
Sbjct: 139 -----------------WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VVKLGD 179
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
+G+ + + ++ G+ + +
Sbjct: 180 LGLGRFFSSKTT-------------------AAHSLV----------------GTPYYMS 204
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDA---NIVKDRKDLFLVEHI 767
PE++ + D++SLGC+L+ + P+ G+ + I + +H
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 768 -PEAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E L ++P+P+ RP V +
Sbjct: 264 SEELRQLVNMCINPDPEKRPDVTYVYDVAK 293
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-30
Identities = 49/354 (13%), Positives = 101/354 (28%), Gaps = 60/354 (16%)
Query: 464 DRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIA 522
+ G R + +V + + + + E G S V T + +
Sbjct: 70 ESELGER-PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFT------ERPPSNAI 122
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
++R + ++ + DL+ ++ E+D +L+
Sbjct: 123 KQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF 182
Query: 583 IRLLPVMENTKDIELWKANGH-----PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
+ E+ ++ L++T ++ L+ LH GL+H L+P ++
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI 242
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
++ + L+ R
Sbjct: 243 VLDQRGG--VFLTGFEHLVRDGASAVSPI------------------------------- 269
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQ-----TRAIDLFSLGCILFFCITGGKHPYGESFERDA 752
G+ A L G+ T A D ++LG +++ P DA
Sbjct: 270 ---GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC-ADLP----NTDDA 321
Query: 753 NIVKDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLS 805
+ ++IP+ V L L + R + P + T LS
Sbjct: 322 ALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-29
Identities = 48/361 (13%), Positives = 88/361 (24%), Gaps = 78/361 (21%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVA-----LKEIQNLIA 522
+ + + + + G V L + E A+K + L E A
Sbjct: 58 SQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAA 117
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+ D + V S QL+ + D + N +
Sbjct: 118 RLLGESPEEARDRRRLLLPS------------DAVAVQSQPPFAQLSPGQDDYAVANYLL 165
Query: 583 IRLLPVMENTKDIELWKANGH-----PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
+ ++ L +T ++ ++L GL+H P N+
Sbjct: 166 LMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNL 225
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
I D L D+ ++
Sbjct: 226 FIMPDGR--LMLGDVSALWKVGTRGPAS-------------------------------- 251
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHPYGESFERDANI 754
AP + L T A++ + LG ++ P+G
Sbjct: 252 -------SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC-LFLPFGLVTPGIKGS 303
Query: 755 VK---------DRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRL 804
K D +P+ V L R L+ + R + P F +
Sbjct: 304 WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI 363
Query: 805 S 805
S
Sbjct: 364 S 364
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 67/348 (19%), Positives = 118/348 (33%), Gaps = 86/348 (24%)
Query: 466 VDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD---VALKEIQNLI 521
+D + +F +++ +G V L EG ++G A+KR++ A +E
Sbjct: 26 IDNKH----YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMH- 80
Query: 522 ASDQHPNIVRWYGVESDQDF----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL 577
HPNI+R + +L L + G+ ++ + N
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLP----------FFKRGTLWNEIERLKDKGNF 130
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
L E +I L + I GL +H G HRDLKP N+
Sbjct: 131 LTEDQI-------------------------LWLLLGICRGLEAIHAKGYAHRDLKPTNI 165
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
L+ + L D+G + + Q T D
Sbjct: 166 LLGDEGQP--VLMDLGSMNQACIHVEGSRQALTLQDWAAQ-------------------- 203
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQTRAI----DLFSLGCILFFCITGGKHPYGESFERD-- 751
+ ++APE L + I D++SLGC+L+ + G+ PY F++
Sbjct: 204 ------RCTISYRAPE-LFSVQSHCVIDERTDVWSLGCVLYAMMF-GEGPYDMVFQKGDS 255
Query: 752 -ANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
A V+++ + L ++ +P RP +L+
Sbjct: 256 VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEA 303
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-29
Identities = 74/341 (21%), Positives = 127/341 (37%), Gaps = 92/341 (26%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIAS 523
+ ++ K++ G+ G V+L A+K + + + L+E+ L
Sbjct: 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL 93
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
D HPNI++ Y D+ YL +E L D I + F E A
Sbjct: 94 D-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-IHRMKFNEVDAAV----------- 140
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SK 641
+ + ++SG+++LH+ ++HRDLKP+N+L+ SK
Sbjct: 141 ----------------------------IIKQVLSGVTYLHKHNIVHRDLKPENLLLESK 172
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
+K K+ D G+S VF+
Sbjct: 173 EKDALIKIVDFGLSA-----------------------------------VFENQKKMKE 197
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKD 760
G++ + APE +L+ + D++S+G ILF + G P G++ + V+ K
Sbjct: 198 R-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG-YPPFGGQTDQEILRKVEKGKY 254
Query: 761 LFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F A DL ++L + R AQ L HP+
Sbjct: 255 TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 9e-29
Identities = 74/336 (22%), Positives = 122/336 (36%), Gaps = 111/336 (33%)
Query: 464 DRVDGR-RIGKLVVFNKEIAKGSNGTVVL--EGNYEGRSVAVKRLVKTHHDVALK----E 516
D V G+ + IA G G + L + N GR V +K LV + A E
Sbjct: 76 DIVAGQYEVKGC------IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAE 129
Query: 517 IQNLIASDQHPNIVRWY--GVESDQD---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAK 571
Q L A HP+IV+ + +D+ Y+ +E YV S
Sbjct: 130 RQFL-AEVVHPSIVQIFNFVEHTDRHGDPVGYIVME----------YVGGQS-------- 170
Query: 572 EQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631
L + + LPV A+ + +I+ LS+LH IGL++ D
Sbjct: 171 ------LKRSKGQKLPV-----------------AEAIAYLLEILPALSYLHSIGLVYND 207
Query: 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691
LKP+N+++++++ KL D+G + ++
Sbjct: 208 LKPENIMLTEEQ---LKLIDLGA--------------VSRIN------------------ 232
Query: 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
FG L+ T G+ QAPE ++ T A D++++G L +
Sbjct: 233 --SFGYLYGTPGF-----QAPEI-VRTGPTVATDIYTVGRTLAALTL-DLPTR------N 277
Query: 752 ANIVKDRKDLFLVEHIPEAVD-LFTRLLDPNPDLRP 786
V + V ++ L R +DP+P R
Sbjct: 278 GRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF 313
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-28
Identities = 80/375 (21%), Positives = 135/375 (36%), Gaps = 103/375 (27%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLI 521
+ + KGS G V+L + G+ AVK + K + L+E+Q L
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
D HPNI++ Y D+ + YL E T L D I + F E A+
Sbjct: 82 QLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAAR--------- 130
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI- 639
+ R ++SG++++H+ ++HRDLKP+N+L+
Sbjct: 131 ------------------------------IIRQVLSGITYMHKNKIVHRDLKPENLLLE 160
Query: 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699
SK K ++ D G+S F+
Sbjct: 161 SKSKDANIRIIDFGLSTH-----------------------------------FEASKKM 185
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDR 758
G++ + APE +L G D++S G IL+ ++G P G + V+
Sbjct: 186 KDK-IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKG 242
Query: 759 KDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRV 814
K F + A DL ++L P +R A++ L+H W ++ +
Sbjct: 243 KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE--W--------IQTYTKEQ 292
Query: 815 ELEDRESDSKLLRAL 829
D S + +
Sbjct: 293 ISVDVPSLDNAILNI 307
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-28
Identities = 79/374 (21%), Positives = 133/374 (35%), Gaps = 101/374 (27%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIA 522
+ + KGS G V+ + + AVK L+E++ L
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
D HPNI++ + + D Y+ E T L D I + F E A+
Sbjct: 78 LD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAAR---------- 125
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-S 640
+ + + SG++++H+ ++HRDLKP+N+L+ S
Sbjct: 126 -----------------------------IIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
K+K K+ D G+S FQ
Sbjct: 157 KEKDCDIKIIDFGLSTC-----------------------------------FQQNTKMK 181
Query: 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRK 759
G++ + APE +L+G D++S G IL+ ++G P YG++ V+ K
Sbjct: 182 DR-IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG-TPPFYGKNEYDILKRVETGK 238
Query: 760 DLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVE 815
F + +A DL ++L +P LR A L HP W + S+
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP--W-------IQKYSSETPT 289
Query: 816 LEDRESDSKLLRAL 829
+ D S + +
Sbjct: 290 ISDLPSLESAMTNI 303
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-28
Identities = 73/384 (19%), Positives = 140/384 (36%), Gaps = 113/384 (29%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKT----------------HHDV 512
+IG+ +++ G+ G V+L + A+K + K+ H+
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 513 ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAK 571
EI L + D HPNI++ + V D+ + YL E L + I + F+E A
Sbjct: 93 IYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-INRHKFDECDAAN 150
Query: 572 EQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631
+ + I+SG+ +LH+ ++HRD
Sbjct: 151 ---------------------------------------IMKQILSGICYLHKHNIVHRD 171
Query: 632 LKPQNVLI-SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICE 690
+KP+N+L+ +K+ K+ D G+S
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGLSSF--------------------------------- 198
Query: 691 CVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFE 749
F G++ + APE +L+ + D++S G I++ + G P G++ +
Sbjct: 199 --FSKDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG-YPPFGGQNDQ 253
Query: 750 RDANIVKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLS 805
V+ K F +I EA +L +L + + R A+ LN W
Sbjct: 254 DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR--W------- 304
Query: 806 FLRDVSDRVELEDRESDSKLLRAL 829
++ ++ + D+++ L +
Sbjct: 305 -IKKYANNINKSDQKTLCGALSNM 327
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 7e-28
Identities = 47/355 (13%), Positives = 104/355 (29%), Gaps = 61/355 (17%)
Query: 464 DRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIA 522
+ G R LV + + + + E G S V T + +
Sbjct: 65 ESELGERPRTLV-RGTVLGQEDPYAYLEATDQETGESFEVHVPYFT------ERPPSNAI 117
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
++R + ++ + DL+ ++ E+D +L+
Sbjct: 118 KQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF 177
Query: 583 IRLLPVMENTKDIELWKANGHPSAQL-----LKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
+ E+ ++ L L++T ++ L+ LH GL+H L+P ++
Sbjct: 178 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI 237
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
++ + L+ R +
Sbjct: 238 VLDQRGG--VFLTGFEHLVRDGARVVSSV------------------------------- 264
Query: 698 LFFTVGYG------SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751
+ G+ + + + T + D ++LG ++++ P +D
Sbjct: 265 ---SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC-ADLP----ITKD 316
Query: 752 ANIVKDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLS 805
A + ++IP+ V L L + R + P + T LS
Sbjct: 317 AALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 371
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 9e-28
Identities = 77/347 (22%), Positives = 127/347 (36%), Gaps = 101/347 (29%)
Query: 466 VDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALK-EIQ 518
VD R + V + + KG + + A K L+K H + EI
Sbjct: 9 VDPRSRRRYVR-GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS 67
Query: 519 NLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNL 577
S H ++V ++G D DFV++ LE C SL +L + E
Sbjct: 68 IH-RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEP---------- 115
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
E R R IV G +LH +IHRDLK N+
Sbjct: 116 --EAR---------------------------YYLRQIVLGCQYLHRNRVIHRDLKLGNL 146
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
+ ++ K+ D G++ +++ D V+C
Sbjct: 147 FL--NEDLEVKIGDFGLATKVEYDGERKK--------------------VLC-------- 176
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK 756
G+ + APE +L + + +D++S+GCI++ + GK P FE + + +
Sbjct: 177 -------GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLV-GKPP----FE-TSCLKE 222
Query: 757 DRK-----DLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + +HI P A L ++L +P RP +LN FF
Sbjct: 223 TYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 71/315 (22%), Positives = 116/315 (36%), Gaps = 99/315 (31%)
Query: 497 GRSVAVK-----RLVKTHHDVALK-EIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550
A K L+K H + EI S H ++V ++G D DFV++ LE C
Sbjct: 66 KEVFAGKIVPKSLLLKPHQREKMSMEISIH-RSLAHQHVVGFHGFFEDNDFVFVVLELCR 124
Query: 551 C-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
SL +L + E E R
Sbjct: 125 RRSLLELH-KRRKALTEP------------EAR--------------------------- 144
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA 669
R IV G +LH +IHRDLK N+ + ++ K+ D G++ +++ D
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFL--NEDLEVKIGDFGLATKVEYDGERKK--- 199
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFS 728
V+C G+ + APE +L + + +D++S
Sbjct: 200 -----------------VLC---------------GTPNYIAPE-VLSKKGHSFEVDVWS 226
Query: 729 LGCILFFCITGGKHPYGESFERDANIVKDRK-----DLFLVEHI-PEAVDLFTRLLDPNP 782
+GCI++ + GK P FE + + + + + +HI P A L ++L +P
Sbjct: 227 IGCIMYTLLV-GKPP----FE-TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDP 280
Query: 783 DLRPKAQNVLNHPFF 797
RP +LN FF
Sbjct: 281 TARPTINELLNDEFF 295
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 71/334 (21%), Positives = 114/334 (34%), Gaps = 91/334 (27%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV 535
++I GS AVK + K+ D +EI+ L+ QHPNI+ V
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP-TEEIEILLRYGQHPNIITLKDV 84
Query: 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
D +VY+ E L D I + F E+
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKI-LRQKFFSER--------------------------- 116
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDM 652
+A+ V I + +LH G++HRDLKP N+L ++ D
Sbjct: 117 ----EAS--------AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G +K+L+ + L C ++ + AP
Sbjct: 165 GFAKQLRAENGLLMT--------------------PC---------------YTANFVAP 189
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANI---VKDRKDLFLVE-- 765
E L + A D++SLG +L+ +TG + + I + K
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 766 -HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ A DL +++L +P R A VL HP+
Sbjct: 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 65/340 (19%), Positives = 110/340 (32%), Gaps = 101/340 (29%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
I GS G +G+ + K L + E+ NL+ +HPNIVR+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEV-NLLRELKHPNIVRY 70
Query: 533 YG--VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
Y ++ +Y+ +E C G + ++ L+E +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCE----------GGDLASVITKGTKERQYLDEEFV------- 113
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL-----IHRDLKPQNVLISKDKSF 645
L+V + L H +HRDLKP NV + ++
Sbjct: 114 ------------------LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN- 154
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
KL D G+++ L D S + G Y+
Sbjct: 155 -VKLGDFGLARILNHDTS-FAKTFVGTPY---YM-------------------------- 183
Query: 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHP-YGESFER-DANIVKDRKDLF 762
+PE + D++SLGC+L+ P S + I + +
Sbjct: 184 -----SPE-QMNRMSYNEKSDIWSLGCLLYELCA-LMPPFTAFSQKELAGKIREGK---- 232
Query: 763 LVEHIP-----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
IP E ++ TR+L+ RP + +L +P
Sbjct: 233 -FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 70/346 (20%), Positives = 116/346 (33%), Gaps = 103/346 (29%)
Query: 473 KLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVR 531
L + +K + +GS ++ AVK + K KEI L + HPNIV+
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVK 70
Query: 532 WYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ V DQ +L +E L + I F E +
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASY------------------- 110
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKL 649
+ R +VS +SH+H++G++HRDLKP+N+L ++ + K+
Sbjct: 111 --------------------IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI 150
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
D G ++ D L C + +
Sbjct: 151 IDFGFARLKPPDNQPLKT--------------------PC---------------FTLHY 175
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFLVEHI 767
APE L Q + DL+SLG IL+ ++G + ++ + I
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSG--QVPFQSHD---RSLTCTSAVEIM--KKI 228
Query: 768 ----------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
EA DL LL +P+ R K + + +
Sbjct: 229 KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 71/337 (21%), Positives = 134/337 (39%), Gaps = 84/337 (24%)
Query: 471 IGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIA---SDQH 526
I L +F +++ G+ G V L E G +K + K V +++I+ I S H
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH 79
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
PNI++ + V D +Y+ +E C G E++ + + L+E +
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCE----------GGELLERIVSAQARGKALSEGYVA-- 127
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSF 645
++ + +++ L++ H ++H+DLKP+N+L
Sbjct: 128 -----------------------ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHS 164
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+++ F+ G
Sbjct: 165 PIKIIDFGLAEL-----------------------------------FKSDEHSTNA-AG 188
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFL 763
++ + APE + + T D++S G +++F +TG G S E ++ +
Sbjct: 189 TALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG--CLPFTGTSLEEVQQKATYKEPNYA 245
Query: 764 VE--HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
VE + P+AVDL ++L +P+ RP A VL+H +F
Sbjct: 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-26
Identities = 76/342 (22%), Positives = 126/342 (36%), Gaps = 94/342 (27%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIAS 523
+ + KGS G V+ + + AVK L+E++ L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
D HPNI++ + + D Y+ E T L D I + F E A+
Sbjct: 79 D-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAAR----------- 125
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SK 641
+ + + SG++++H+ ++HRDLKP+N+L+ SK
Sbjct: 126 ----------------------------IIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
+K K+ D G+S FQ
Sbjct: 158 EKDCDIKIIDFGLSTC-----------------------------------FQQNTKMKD 182
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRK 759
G++ + APE +L+G D++S G IL+ ++G P YG++ V+ K
Sbjct: 183 R-IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGK 238
Query: 760 DLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F + I +A DL ++L +P LR A L HP+
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 69/340 (20%), Positives = 123/340 (36%), Gaps = 94/340 (27%)
Query: 471 IGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK----RLVKTHHDVALKEIQNLIASDQ 525
I + I +GS G V + A K V+ +EI+ + + D
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF-KQEIEIMKSLD- 64
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
HPNI+R Y D +YL +E CT L + + V F E A+
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAAR------------- 110
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDK 643
+ +D++S +++ H++ + HRDLKP+N L ++
Sbjct: 111 --------------------------IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
KL D G++ R F+ G + T
Sbjct: 145 DSPLKLIDFGLAAR-----------------------------------FKPGKMMRTK- 168
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDL 761
G+ + +P+ +L+G D +S G +++ + G +P + +++
Sbjct: 169 VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG--YPPFSAPTDSEVMLKIREGTFT 225
Query: 762 FLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F + ++ P+A L RLL +P R + L H +F
Sbjct: 226 FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 5e-26
Identities = 70/342 (20%), Positives = 120/342 (35%), Gaps = 96/342 (28%)
Query: 472 GKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALKEIQNLIASDQ 525
G+ + F+ EI +GS TV + E VA +L K+ +E + L Q
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-Q 83
Query: 526 HPNIVR----WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
HPNIVR W + + L E + SG+ + L + ++
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTE----------LMTSGTLKTYL----KRFKVMKIK 129
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHRDLKPQNVLI 639
+R R I+ GL LH +IHRDLK N+ I
Sbjct: 130 VLR-------------------------SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
Query: 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699
+ + K+ D+G++ + + K VI
Sbjct: 165 T-GPTGSVKIGDLGLATLKRASFA---------------------KAVI----------- 191
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKD 757
G+ + APE + + + ++D+++ G + T ++PY E V
Sbjct: 192 -----GTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIYRRVTS 244
Query: 758 RKDLFLVEHI--PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + PE ++ + N D R +++LNH FF
Sbjct: 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-25
Identities = 72/347 (20%), Positives = 122/347 (35%), Gaps = 104/347 (29%)
Query: 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALK---EIQ 518
G +I V + KGS V + G VA+K + K ++ +I
Sbjct: 7 GEKIEDFKV-GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 519 NLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNL 577
+ +HP+I+ Y D ++VYL LE C +N + F E
Sbjct: 66 CQL---KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN---------- 112
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
E R I++G+ +LH G++HRDL N+
Sbjct: 113 --EAR---------------------------HFMHQIITGMLYLHSHGILHRDLTLSNL 143
Query: 638 LISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
L+ ++ K++D G++ +L+ T +C
Sbjct: 144 LL--TRNMNIKIADFGLATQLKMPHEKHY---T-----------------LC-------- 173
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK 756
G+ + +PE + D++SLGC+ + + G + P F+ +
Sbjct: 174 -------GTPNYISPE-IATRSAHGLESDVWSLGCMFYTLLIG-RPP----FD-TDTVKN 219
Query: 757 DRK-----DLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D + + EA DL +LL NP R +VL+HPF
Sbjct: 220 TLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-25
Identities = 81/397 (20%), Positives = 137/397 (34%), Gaps = 92/397 (23%)
Query: 466 VDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQN 519
+ R + +E+ KG+ V G+ A +L H +E +
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 520 LIASDQHPNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLL 578
HPNIVR + S++ YL + T L + I V + E +
Sbjct: 64 CRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-VAREYYSEADASH------- 114
Query: 579 NEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL 638
+ I+ + H H++G++HR+LKP+N+L
Sbjct: 115 --------------------------------CIQQILEAVLHCHQMGVVHRNLKPENLL 142
Query: 639 -ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697
SK K KL+D G++ ++G+
Sbjct: 143 LASKLKGAAVKLADFGLAIEVEGEQQAWFG--------------------FA-------- 174
Query: 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIV 755
G+ G+ +PE L + + +DL++ G IL+ + G +P + E R +
Sbjct: 175 -------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG--YPPFWDEDQHRLYQQI 225
Query: 756 KDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVS 811
K F + PEA DL ++L NP R A L HP+ T S +
Sbjct: 226 KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQE 285
Query: 812 DRVELEDRESDSKLLRALEGIALVALNGKWDEKMETK 848
L+ + KL A+ + L N ++ K
Sbjct: 286 TVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIK 322
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 68/320 (21%), Positives = 116/320 (36%), Gaps = 88/320 (27%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRL-VKTHHDVALKEIQNLIASDQHPNIVRWY 533
+ + + +G+ G V + + + VA+K++ ++ + E++ L + HPNIV+ Y
Sbjct: 10 IEVEEVVGRGAFGVV-CKAKWRAKDVAIKQIESESERKAFIVELRQL-SRVNHPNIVKLY 67
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
G + V L +E Y GS L+ E
Sbjct: 68 GACLNP--VCLVME----------YAEGGSLYNVLHGAEPLPYY---------------- 99
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEI---GLIHRDLKPQNVLISKDKSFCAKLS 650
+A + G+++LH + LIHRDLKP N+L+ + K+
Sbjct: 100 ----------TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT-VLKIC 148
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G + +Q M+ GS+ W
Sbjct: 149 DFGTACDIQTHMTNNK--------------------------------------GSAAWM 170
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE---SFERDANIVKDRKDLFLVEHI 767
APE + D+FS G IL+ IT + P+ E R V + L++++
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 768 PEAV-DLFTRLLDPNPDLRP 786
P+ + L TR +P RP
Sbjct: 230 PKPIESLMTRCWSKDPSQRP 249
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-25
Identities = 76/351 (21%), Positives = 124/351 (35%), Gaps = 97/351 (27%)
Query: 463 DDRVDGRR---IGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALK-EI 517
D +DG + E+ +G+ V + + A+K L KT ++ EI
Sbjct: 40 DYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEI 99
Query: 518 QNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSN 576
L+ HPNI++ + + L LE T L D I V G + E+ A
Sbjct: 100 GVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRI-VEKGYYSERDAAD----- 152
Query: 577 LLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636
+ I+ +++LHE G++HRDLKP+N
Sbjct: 153 ----------------------------------AVKQILEAVAYLHENGIVHRDLKPEN 178
Query: 637 VL-ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695
+L + K++D G+SK + +
Sbjct: 179 LLYATPAPDAPLKIADFGLSK-----------------------------------IVEH 203
Query: 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERD-- 751
VL TV G+ G+ APE L +D++S+G I + + G Y E ++
Sbjct: 204 QVLMKTV-CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYDERGDQFMF 260
Query: 752 ANIVKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
I+ F+ + A DL +L+ +P R L HP W
Sbjct: 261 RRILNCEYY-FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP--W 308
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 7e-25
Identities = 61/346 (17%), Positives = 110/346 (31%), Gaps = 95/346 (27%)
Query: 475 VVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIV 530
+ + +A+G V + GR A+KRL+ + ++E+ + HPNIV
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 531 RWYGV--------ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
++ ++ Q L E C L + + K + L+
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK------------KMESRGPLSC-- 135
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHRDLKPQNVLIS 640
+LK+ + H+H +IHRDLK +N+L+S
Sbjct: 136 -----------------------DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
+ KL D G + + ++
Sbjct: 173 NQGTI--KLCDFGSATTISHYPDYSWSAQRRALVEEEITR-------------------- 210
Query: 701 TVGYGSSGWQAPEQL-LQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD 757
+ ++ PE + L D+++LGCIL+ +HP FE D ++
Sbjct: 211 ---NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF-RQHP----FE-DGAKLRI 261
Query: 758 RKDLFLVEHIP-------EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
+ IP L +L NP+ R V++
Sbjct: 262 VNGKY---SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 58/320 (18%), Positives = 118/320 (36%), Gaps = 71/320 (22%)
Query: 475 VVFNKEIAKGSNGTVVLEGNY--EGRSVAVKRLVKTHHDVA---LKEIQNLIASDQHPNI 529
++ + + KG G ++ + G + +K L++ + LKE++ ++ +HPN+
Sbjct: 12 LIHGEVLGKGCFGQA-IKVTHRETGEVMVMKELIRFDEETQRTFLKEVK-VMRCLEHPNV 69
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+++ GV + E Y+ G+ + K DS
Sbjct: 70 LKFIGVLYKDKRLNFITE----------YIKGGTLRGII--KSMDSQY------------ 105
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
P +Q + +DI SG+++LH + +IHRDL N L+ ++ +
Sbjct: 106 --------------PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV--RENKNVVV 149
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
+D G+++ + + + + +++ G+ W
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV---------------------GNPYW 188
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGK-HPYGESFERD-ANIVKDRKDLFLVEHI 767
APE + +D+FS G +L I P D V+ D + +
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNC 248
Query: 768 PEAV-DLFTRLLDPNPDLRP 786
P + + R D +P+ RP
Sbjct: 249 PPSFFPITVRCCDLDPEKRP 268
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 45/367 (12%), Positives = 101/367 (27%), Gaps = 94/367 (25%)
Query: 477 FNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPN 528
+ + +G+ V + +K + ++ +
Sbjct: 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHM 128
Query: 529 IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+++Y Q+ L E + +L + I K ++ + +
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAI----------NLYKNTPEKVMPQGLVI--- 175
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS------- 640
++ + +H+ +IH D+KP N ++
Sbjct: 176 ----------------------SFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213
Query: 641 --KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
D S L D+G S DM +
Sbjct: 214 DEDDLSAGLALIDLGQSI----DMKLFPKGTI---------------------------- 241
Query: 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR 758
FT +SG+Q E L ID F + ++ + G + ++ +
Sbjct: 242 -FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF-GTYMKVKNEGGECKPEGLF 299
Query: 759 KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF-W---TADTRLSFLRDVSDRV 814
+ L ++ + F +L+ + ++L ++ LR+ +
Sbjct: 300 RRLPHLDMWN---EFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRALRNRLIVL 356
Query: 815 ELEDRES 821
LE + S
Sbjct: 357 LLECKRS 363
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 66/336 (19%), Positives = 111/336 (33%), Gaps = 88/336 (26%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVK----RLVKTHHDVALKEIQNLIA---SDQHPN 528
+ I KG V G+ AVK + ++ ++++ + +HP+
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
IV S +Y+ E + DL E + + + +E
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGA--DL-------CFE-IVKRADAGFVYSEAVAS---- 133
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCA 647
R I+ L + H+ +IHRD+KP VL SK+ S
Sbjct: 134 ---------------------HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPV 172
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
KL G++ +L G++ G+
Sbjct: 173 KLGGFGVAIQLGES----------------------------------GLVAGGR-VGTP 197
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFLVE 765
+ APE + + + +D++ G ILF ++G YG I+K +
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLFEGIIKGKYK-MNPR 254
Query: 766 ---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
HI A DL R+L +P R LNHP+
Sbjct: 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-24
Identities = 84/410 (20%), Positives = 143/410 (34%), Gaps = 112/410 (27%)
Query: 434 NESKVG--------ETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGS 485
N VG ++ + F+ + D V + + + +K + G+
Sbjct: 88 NTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGA 147
Query: 486 NGTVVL-EGNYEGRSVAVKRLVK-----------THHDVALKEIQNLIASDQHPNIVRWY 533
G V L + VA++ + K EI+ L + HP I++
Sbjct: 148 CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIK 206
Query: 534 GVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+D Y+ LE L D + V + +E K
Sbjct: 207 NFFDAED-YYIVLELMEGGELFDKV-VGNKRLKEA-TCK--------------------- 242
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLSD 651
++ + +LHE G+IHRDLKP+NVL+ S+++ K++D
Sbjct: 243 -----------------LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD 285
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G SK + L T+ G+ + A
Sbjct: 286 FGHSK-----------------------------------ILGETSLMRTL-CGTPTYLA 309
Query: 712 PEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHP--YGESFERD-ANIVKDRKDLFLVE 765
PE L+ RA+D +SLG ILF C++G +P + + + K F+ E
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSG--YPPFSEHRTQVSLKDQITSGKYNFIPE 367
Query: 766 ---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVS 811
+ +A+DL +LL +P R + L HP+ D + F +S
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS 417
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-24
Identities = 66/342 (19%), Positives = 113/342 (33%), Gaps = 93/342 (27%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIAS 523
+ +E+ KG+ V G A K +L +E +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC-RK 84
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
QHPNIVR + ++ F YL + T L + I V + E +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-VAREFYSEADASH----------- 132
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISK 641
+ I+ +++ H G++HR+LKP+N+L SK
Sbjct: 133 ----------------------------CIQQILESIAYCHSNGIVHRNLKPENLLLASK 164
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
K KL+D G++ +
Sbjct: 165 AKGAAVKLADFGLAI-----------------------------------EVNDSEAWHG 189
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRK 759
G+ G+ +PE L + ++ +D+++ G IL+ + G +P + E R +K
Sbjct: 190 F-AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRLYAQIKAGA 246
Query: 760 DLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + PEA L +L NP R A L P+
Sbjct: 247 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 4e-24
Identities = 64/322 (19%), Positives = 107/322 (33%), Gaps = 86/322 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVAL-----KEIQNLIASDQHPNI 529
+ ++I GS GTV + G VAVK L++ +E+ + +HPNI
Sbjct: 39 LNIKEKIGAGSFGTV-HRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIM-KRLRHPNI 96
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V + G + + + E Y+ GS L+ L
Sbjct: 97 VLFMGAVTQPPNLSIVTE----------YLSRGSLYRLLHKSGAREQL------------ 134
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHRDLKPQNVLISKDKSFCA 647
+ L + D+ G+++LH ++HR+LK N+L+ DK +
Sbjct: 135 --------------DERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV--DKKYTV 178
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+ D G+S+ A G+
Sbjct: 179 KVCDFGLSRLKASTFLSSKSAA-----------------------------------GTP 203
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE--SFERDANIVKDRKDLFLVE 765
W APE L D++S G IL+ T + P+G + A + K L +
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 766 HIPEAV-DLFTRLLDPNPDLRP 786
++ V + P RP
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRP 284
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 6e-24
Identities = 66/333 (19%), Positives = 112/333 (33%), Gaps = 93/333 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIASDQHPNIVRW 532
+E+ KG+ V G A K +L +E + QHPNIVR
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC-RKLQHPNIVRL 70
Query: 533 YGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ ++ F YL + T L + I V + E +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDI-VAREFYSEADASH-------------------- 109
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLS 650
+ I+ +++ H G++HR+LKP+N+L SK K KL+
Sbjct: 110 -------------------CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G++ + G+ G+
Sbjct: 151 DFGLAI-----------------------------------EVNDSEAWHGF-AGTPGYL 174
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFLVE--- 765
+PE L + ++ +D+++ G IL+ + G +P + E R +K +
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG--YPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 766 HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ PEA L +L NP R A L P+
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-24
Identities = 75/368 (20%), Positives = 116/368 (31%), Gaps = 111/368 (30%)
Query: 476 VFNKEIAKGSNGTVVLEGNYE-GRSVAVK----RLVKTHHDVALKEIQNLIASDQHPNIV 530
+ + G G V+ + + G VA+K L + + EIQ + HPN+V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM-KKLNHPNVV 75
Query: 531 RWYGVESDQ------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
V D L++E Y G + LN E L E IR
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAME----------YCEGGDLRKYLNQFEN-CCGLKEGPIR 124
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDK 643
+ DI S L +LHE +IHRDLKP+N+++ +
Sbjct: 125 -------------------------TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
K+ D+G +K L C
Sbjct: 160 RLIHKIIDLGYAKELDQGELCTEF------------------------------------ 183
Query: 704 YGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-------------------GKHP 743
G+ + APE LL+ ++ T +D +S G + F CITG +
Sbjct: 184 VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242
Query: 744 YGESFERDANIVKDRKDLFLVEHIP-----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
+ ++ VK L H+ + +L + R N F
Sbjct: 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302
Query: 799 TADTRLSF 806
D+ LS
Sbjct: 303 ALDSILSL 310
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-23
Identities = 55/369 (14%), Positives = 108/369 (29%), Gaps = 121/369 (32%)
Query: 476 VFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIV 530
+ + + +G+ V + + G A+K DV ++E + L + H NIV
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIV 70
Query: 531 RWYGVESDQ--DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+ + +E + L +E + GS L + L E
Sbjct: 71 KLFAIEEETTTRHKVLIME----------FCPCGSLYTVLEEPSN-AYGLPESEFL---- 115
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI--SKDKSFC 646
V RD+V G++HL E G++HR++KP N++ +D
Sbjct: 116 ---------------------IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV 154
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
KL+D G ++ L+ D F YG+
Sbjct: 155 YKLTDFGAARELEDDE------------------------------------QFVSLYGT 178
Query: 707 SGWQAPEQLLQGRQTR---------AIDLFSLGCILFFCITG------------------ 739
+ P+ + + R +DL+S+G + TG
Sbjct: 179 EEYLHPD-MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 740 ------GKHPYGESFERDANIVKDRKDLFLVEHIP-----EAVDLFTRLLDPNPDLRPKA 788
+ + + D+ + + + +L+ + +
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297
Query: 789 QNVLNHPFF 797
Sbjct: 298 DQFFAETSD 306
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-23
Identities = 76/440 (17%), Positives = 134/440 (30%), Gaps = 109/440 (24%)
Query: 386 FYHSKQVKSKKQNEEHITK---TGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETD 442
+HS V +K E + +P + +R + R+ + + E+K
Sbjct: 5 HHHSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDA 64
Query: 443 GLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVA 501
+ + D + D + + I +G + V G A
Sbjct: 65 QPKGTENLYFQSM-GPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFA 123
Query: 502 VKRLVKT-----------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550
VK + T + +E L HP+I+ F++L +
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 551 CS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609
L D + + E+ +
Sbjct: 184 KGELFDYL-TEKVALSEK-ETR-------------------------------------- 203
Query: 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNA 669
+ R ++ +S LH ++HRDLKP+N+L+ + +LSD G S
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQI--RLSDFGFSC------------- 248
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR------A 723
+ G + G+ G+ APE L
Sbjct: 249 ----------------------HLEPGEKLREL-CGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 724 IDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFLVE---HI-PEAVDLFTRL 777
+DL++ G ILF + G P + ++ + + F DL +RL
Sbjct: 286 VDLWACGVILFTLLAG--SPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRL 343
Query: 778 LDPNPDLRPKAQNVLNHPFF 797
L +P+ R A+ L HPFF
Sbjct: 344 LQVDPEARLTAEQALQHPFF 363
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 2e-23
Identities = 81/363 (22%), Positives = 126/363 (34%), Gaps = 115/363 (31%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNI 529
+ + KG G V L + +A+K L K H EIQ+ + +HPNI
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNI 71
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R YG D VYL LE Y G + + Q + +E R
Sbjct: 72 LRLYGYFHDATRVYLILE----------YAPLG----TVYRELQKLSKFDEQRTA----- 112
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
++ + LS+ H +IHRD+KP+N+L+ + K+
Sbjct: 113 --------------------TYITELANALSYCHSKRVIHRDIKPENLLL--GSAGELKI 150
Query: 650 SDMGISKRLQGDM---SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
+D G S C T + YL
Sbjct: 151 ADFGWSVHAPSSRRTDLCGTLD---------YL--------------------------- 174
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK----DLF 762
PE + +DL+SLG + + + GK P FE + ++ +
Sbjct: 175 ----PPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPP----FEANTYQETYKRISRVEFT 225
Query: 763 LVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRES 821
+ + A DL +RLL NP RP + VL HP+ + S +++ES
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW---------ITANSSKPSNCQNKES 276
Query: 822 DSK 824
SK
Sbjct: 277 ASK 279
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 62/347 (17%), Positives = 106/347 (30%), Gaps = 106/347 (30%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------------HDVALKEIQNLIAS 523
+ + +G + V + AVK + T + LKE+ L
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
HPNI++ F +L + L D + + E+ +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEK-ETR----------- 127
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
K+ R ++ + LH++ ++HRDLKP+N+L+ D
Sbjct: 128 ---------------------------KIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
+ KL+D G S G V
Sbjct: 161 MNI--KLTDFGFSC-----------------------------------QLDPGEKLREV 183
Query: 703 GYGSSGWQAPEQLLQGRQ------TRAIDLFSLGCILFFCITGGKHP--YGESFERDANI 754
G+ + APE + + +D++S G I++ + G P + +
Sbjct: 184 -CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLMLRM 240
Query: 755 VKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ F DL +R L P R A+ L HPFF
Sbjct: 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-23
Identities = 68/352 (19%), Positives = 114/352 (32%), Gaps = 102/352 (28%)
Query: 478 NKEIAKGSNGTVVL-EGNYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWY 533
+ +G++ V + AVK + K +E++ L H N++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 534 GVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
++D YL E+ S+ I F E +
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHI-HKRRHFNELEASV--------------------- 115
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLSD 651
V +D+ S L LH G+ HRDLKP+N+L ++ K+ D
Sbjct: 116 ------------------VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD 157
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
+ ++ + C + + L C GS+ + A
Sbjct: 158 FDLGSGIKLNGDCSPISTPEL-------------LTPC---------------GSAEYMA 189
Query: 712 PEQLLQGRQTR-----AIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDL 761
PE + + DL+SLG IL+ ++G G+ ++R + L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 762 FLVEHI----------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F E I A DL ++LL + R A VL HP+
Sbjct: 250 F--ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 70/357 (19%), Positives = 123/357 (34%), Gaps = 125/357 (35%)
Query: 459 TDLIDDRVDGR-RIGKLVVFNKEIAKGSNGTVVLEGNYEG------RSVAVKRLVKTHHD 511
+ +I ++ R +I + G TV Y VA+K +
Sbjct: 2 SHMIGKIINERYKIVDK------LGGGGMSTV-----YLAEDTILNIKVAIKAI---FIP 47
Query: 512 VAL---------KEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLS 561
+E+ N + H NIV V+ + D YL +E +L++ I
Sbjct: 48 PREKEETLKRFEREVHN-SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---- 102
Query: 562 GSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGH-PSAQLLKVTRDIVSGLS 620
+++G + T I+ G+
Sbjct: 103 -------------------------------------ESHGPLSVDTAINFTNQILDGIK 125
Query: 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680
H H++ ++HRD+KPQN+LI +K+ K+ D GI+K L + LTQ +
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSE--TSLTQTNHVL-------- 173
Query: 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 740
G TV Y S PEQ D++S+G +L+ + G
Sbjct: 174 ---------------G----TVQYFS-----PEQAKGEATDECTDIYSIGIVLYEMLV-G 208
Query: 741 KHPY-GES--------FERDANIVKDRKDLFLVEHIPEAVD-LFTRLLDPNPDLRPK 787
+ P+ GE+ + V + + IP+++ + R + + R K
Sbjct: 209 EPPFNGETAVSIAIKHIQDSVPNVTTD----VRKDIPQSLSNVILRATEKDKANRYK 261
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 59/347 (17%), Positives = 116/347 (33%), Gaps = 111/347 (31%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR--SVAVKRLVKTHHDVA----------LKEIQNLIA 522
+ + K+I KG G V +G VA+K L+ + +E+ + +
Sbjct: 21 IEYEKQIGKGGFGLV-HKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM-S 78
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLI--YVLSGSFEEQLNAKEQDSNLLNE 580
+ HPNIV+ YG+ ++ +V G + L +
Sbjct: 79 NLNHPNIVKLYGL-------------MHNPPR-MVMEFVPCGDL----------YHRLLD 114
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHRDLKPQNVL 638
+ + L++ DI G+ ++ ++HRDL+ N+
Sbjct: 115 KAHPI------------------KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 639 IS---KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695
+ ++ CAK++D G+S++ +S L
Sbjct: 157 LQSLDENAPVCAKVADFGLSQQSVHSVSGLL----------------------------- 187
Query: 696 GVLFFTVGYGSSGWQAPEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHPYGE----SF 748
G+ W APE + + T D +S IL+ +T G+ P+ E
Sbjct: 188 ---------GNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI 236
Query: 749 ERDANIVKDRKDLFLVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNH 794
+ I ++ + E P + ++ +P RP ++
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 3e-22
Identities = 70/385 (18%), Positives = 132/385 (34%), Gaps = 97/385 (25%)
Query: 476 VFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYG 534
V ++ + G NG V+ A+K L A +E++ + Q P+IVR
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVD 122
Query: 535 V----ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V + + + + +E L I +++ E
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRI-------------QDRGDQAFTE--------- 160
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAK 648
++ +++++K I + +LH I + HRD+KP+N+L SK + K
Sbjct: 161 ---RE----------ASEIMK---SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L+D G +K S T C +
Sbjct: 205 LTDFGFAKETTSHNSLTT---------------------PC---------------YTPY 228
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDR----KDLF 762
+ APE L + ++ D++SLG I++ + G +P Y + +K R + F
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG--YPPFYSNHGLAISPGMKTRIRMGQYEF 286
Query: 763 LVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELED 818
+ E L LL P R +NHP W + + L++
Sbjct: 287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP--WIMQSTKVPQTPLHTSRVLKE 344
Query: 819 RESDSKLLRALEGIALVALNGKWDE 843
+ + ++ AL + +++
Sbjct: 345 DKERWEDVKEEMTSALATMRVDYEQ 369
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 3e-22
Identities = 59/347 (17%), Positives = 117/347 (33%), Gaps = 88/347 (25%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVA--LKEIQNLIASDQ 525
+ + + + +++ +G G V ++ K + D KEI ++ +
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-ILNIAR 59
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H NI+ + + + + E ++ E++N + LNE I
Sbjct: 60 HRNILHLHESFESMEELVMIFE----------FISGLDIFERINTSAFE---LNEREIV- 105
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ L LH + H D++P+N++ +S
Sbjct: 106 ------------------------SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS 141
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ + G +++L+ + F + +
Sbjct: 142 TIKIIEFGQARQLKPGDN------------------------------------FRLLFT 165
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERD--ANIVKDRKDLF 762
+ + APE + A D++SLG +++ ++ G +P E+ + NI+ F
Sbjct: 166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAET-NQQIIENIMNAEYT-F 222
Query: 763 LVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLS 805
E I EA+D RLL R A L HP+ R+S
Sbjct: 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVS 269
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 4e-22
Identities = 81/361 (22%), Positives = 134/361 (37%), Gaps = 108/361 (29%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVK------------THHDVALKEIQNLIAS 523
+K + G+ G V L + VA+K + K +V EI+ L
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ETEIEILKKL 72
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+ HP I++ +D Y+ LE L D + V + +E K
Sbjct: 73 N-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKV-VGNKRLKEA-TCK----------- 117
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SK 641
++ + +LHE G+IHRDLKP+NVL+ S+
Sbjct: 118 ---------------------------LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
++ K++D G SK + G+ S + +C
Sbjct: 151 EEDCLIKITDFGHSK-ILGETSLMRT--------------------LC------------ 177
Query: 702 VGYGSSGWQAPEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHP--YGESFERD--ANI 754
G+ + APE L+ RA+D +SLG ILF C++G +P + I
Sbjct: 178 ---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--YPPFSEHRTQVSLKDQI 232
Query: 755 VKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDV 810
+ + F+ E + +A+DL +LL +P R + L HP+ D + F +
Sbjct: 233 TSGKYN-FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
Query: 811 S 811
S
Sbjct: 292 S 292
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 5e-22
Identities = 68/338 (20%), Positives = 116/338 (34%), Gaps = 110/338 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNI 529
+ + KG G V L + +A+K L K+ H EIQ+ + +HPNI
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL---RHPNI 76
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R Y D+ +YL LE + G +L + Q +E R
Sbjct: 77 LRMYNYFHDRKRIYLMLE----------FAPRG----ELYKELQKHGRFDEQRSA----- 117
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
++ L + HE +IHRD+KP+N+L+ K+
Sbjct: 118 --------------------TFMEELADALHYCHERKVIHRDIKPENLLM--GYKGELKI 155
Query: 650 SDMGISKRLQGDM---SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
+D G S C T + YL
Sbjct: 156 ADFGWSVHAPSLRRRTMCGTLD---------YL--------------------------- 179
Query: 707 SGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK-----D 760
PE +++G+ +DL+ G + + + G P F+ + + + D
Sbjct: 180 ----PPE-MIEGKTHDEKVDLWCAGVLCYEFLV-GMPP----FD-SPSHTETHRRIVNVD 228
Query: 761 LFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
L + + DL ++LL +P R + V+ HP+
Sbjct: 229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV 266
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 5e-22
Identities = 75/361 (20%), Positives = 121/361 (33%), Gaps = 106/361 (29%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQN----LIASDQHPNIVRWY 533
E+ G+ G V + G +AVK++ ++ + K I ++ S P IV+ +
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
G V++++E L + G E+
Sbjct: 91 GTFITNTDVFIAMELMGTCAEKLKKRMQGPIPER-------------------------- 124
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISKDKSFCAKLSDM 652
L K+T IV L +L E G+IHRD+KP N+L+ + KL D
Sbjct: 125 -------------ILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ--IKLCDF 169
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GIS RL D + G + + AP
Sbjct: 170 GISGRLVDDKAKDR---------------------------------SA---GCAAYMAP 193
Query: 713 EQLLQGRQTRAI-----DLFSLGCILFFCITGGKHPYGES---FERDANIVKD------R 758
E++ T+ D++SLG L T G+ PY FE ++++
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 759 KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR----LSFLRDVSDRV 814
F + L + RPK +L H F +T S+ +DV +
Sbjct: 253 HMGF----SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKT 308
Query: 815 E 815
E
Sbjct: 309 E 309
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 6e-22
Identities = 64/335 (19%), Positives = 116/335 (34%), Gaps = 96/335 (28%)
Query: 478 NKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV- 535
+ + G NG V+ G+ A+K L + A +E+ + + P+IV V
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVY 91
Query: 536 ---ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ + + +E L I +E+ E
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRI-------------QERGDQAFTE----------- 127
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAKLS 650
++ +A++++ DI + + LH + HRD+KP+N+L SK+K KL+
Sbjct: 128 -RE----------AAEIMR---DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G +K L + +
Sbjct: 174 DFGFAKETTQ-----------------------------------NALQTPC--YTPYYV 196
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDR----KDLFLV 764
APE L + ++ D++SLG I++ + G P Y + + + +K R + F
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCG--FPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 765 E---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHP 795
+ +A L LL +P R +NHP
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 6e-22
Identities = 53/328 (16%), Positives = 105/328 (32%), Gaps = 99/328 (30%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVAL-----KEIQNLIASDQHPNI 529
+ F ++ + +G + +G ++G + VK L +E L HPN+
Sbjct: 12 LNFLTKLNENHSGEL-WKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL-RIFSHPNV 69
Query: 530 VRWYGVESDQDFVYLSL--ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+ G + +L ++ GS L
Sbjct: 70 LPVLGACQSPPAPHPTLITH----------WMPYGS---------------------LYN 98
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH--EIGLIHRDLKPQNVLISKDKSF 645
V+ + + +Q +K D+ G++ LH E + L ++V+I D+
Sbjct: 99 VLHEGTNFVV------DQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI--DEDM 150
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
A++S D+ Q+ M
Sbjct: 151 TARISM--------ADVKFSFQSPGRM--------------------------------Y 170
Query: 706 SSGWQAPEQLLQGRQ----TRAIDLFSLGCILFFCITGGKHPYGE--SFERDANIVKDRK 759
+ W APE LQ + R+ D++S +L+ +T + P+ + + E + +
Sbjct: 171 APAWVAPE-ALQKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKVALEGL 228
Query: 760 DLFLVEHIPEAV-DLFTRLLDPNPDLRP 786
+ I V L ++ +P RP
Sbjct: 229 RPTIPPGISPHVSKLMKICMNEDPAKRP 256
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 1e-21
Identities = 74/460 (16%), Positives = 133/460 (28%), Gaps = 102/460 (22%)
Query: 389 SKQVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHIT 448
+K +SK ++K+ R + + N +
Sbjct: 86 NKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYY- 144
Query: 449 GNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVK 507
+ + D + D D ++E+ G+ G V G + A K ++
Sbjct: 145 ---PQPVEIKHDHVLDHYD---------IHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
Query: 508 TH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGS 563
H + KEIQ ++ +HP +V + D + + + E + L + +
Sbjct: 193 PHESDKETVRKEIQ-TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 251
Query: 564 FEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623
E + ++ R + GL H+H
Sbjct: 252 MSE--------------------------DEA-------------VEYMRQVCKGLCHMH 272
Query: 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSIL 683
E +H DLKP+N++ + +S KL D G++ L S
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-------------------- 312
Query: 684 LKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP 743
V G++ + APE D++S+G + + ++ G P
Sbjct: 313 ----------------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSP 355
Query: 744 -YGESFERDANIVKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
GE+ + VK I + D +LL +P+ R L HP W
Sbjct: 356 FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP--W 413
Query: 799 TADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALN 838
K L L
Sbjct: 414 LTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLG 453
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 96.8 bits (241), Expect = 2e-21
Identities = 58/365 (15%), Positives = 111/365 (30%), Gaps = 121/365 (33%)
Query: 477 FNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVR 531
+ + +G+ V + + G A+K DV ++E + L + H NIV+
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIVK 71
Query: 532 WYGVESDQ--DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ +E + L +E + GS L + L E
Sbjct: 72 LFAIEEETTTRHKVLIME----------FCPCGSLYTVLEEPSN-AYGLPESEFL----- 115
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI--SKDKSFCA 647
V RD+V G++HL E G++HR++KP N++ +D
Sbjct: 116 --------------------IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
KL+D G ++ L+ D ++ YG+
Sbjct: 156 KLTDFGAARELEDDEQFVSL------------------------------------YGTE 179
Query: 708 GWQAPEQLLQGRQTR---------AIDLFSLGCILFFCITG------------------- 739
+ P+ + + R +DL+S+G + TG
Sbjct: 180 EYLHPD-MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238
Query: 740 ---GKHPYGESFERDA--NIVKDRKDLFLVEHIP-----EAVDLFTRLLDPNPDLRPKAQ 789
GK S + A + D+ + + + +L+ + +
Sbjct: 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
Query: 790 NVLNH 794
Sbjct: 299 QFFAE 303
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 66/331 (19%), Positives = 105/331 (31%), Gaps = 99/331 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-------LKEIQNLIASDQHP 527
+ + I G G V + G VAVK + +E + L A +HP
Sbjct: 9 LTLEEIIGIGGFGKV-YRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAK-LFAMLKHP 66
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NI+ GV + + L +E + G L+ K
Sbjct: 67 NIIALRGVCLKEPNLCLVME----------FARGGPLNRVLSGKRI-------------- 102
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG---LIHRDLKPQNVLISKDKS 644
P L+ I G+++LH+ +IHRDLK N+LI +
Sbjct: 103 ----------------PPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVE 146
Query: 645 F------CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
K++D G ++ T M
Sbjct: 147 NGDLSNKILKITDFG--------LAREWHRTTKMS------------------------- 173
Query: 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKD 757
G+ W APE + ++ D++S G +L+ +T G+ P+ A V
Sbjct: 174 ----AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAM 228
Query: 758 RKD-LFLVEHIPEAV-DLFTRLLDPNPDLRP 786
K L + PE L +P+P RP
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRP 259
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 3e-21
Identities = 72/359 (20%), Positives = 118/359 (32%), Gaps = 128/359 (35%)
Query: 461 LIDDRVDGR-RIGKLVVFNKEIAKGSNGTVVLEGNYEG------RSVAVKRLVKTHHDVA 513
+ R +G++ + G V + R VAVK L D+A
Sbjct: 5 TTPSHLSDRYELGEI------LGFGGMSEV-----HLARDLRDHRDVAVKVL---RADLA 50
Query: 514 L---------KEIQNLIASDQHPNIVRWYGVESDQD----FVYLSLERCT-CSLNDLIYV 559
+E QN A+ HP IV Y + Y+ +E +L D++
Sbjct: 51 RDPSFYLRFRREAQN-AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-- 107
Query: 560 LSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGH-PSAQLLKVTRDIVSG 618
G + ++V D
Sbjct: 108 ---------------------------------------HTEGPMTPKRAIEVIADACQA 128
Query: 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVY 678
L+ H+ G+IHRD+KP N++IS + K+ D GI++ + + +TQ A +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVI------ 180
Query: 679 LVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 738
G T Y S PEQ D++SLGC+L+ +T
Sbjct: 181 -----------------G----TAQYLS-----PEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 739 GGKHPY-GES--------FERDANIVKDRKDLFLVEHIPEAVD-LFTRLLDPNPDLRPK 787
G+ P+ G+S D E + +D + + L NP+ R +
Sbjct: 215 -GEPPFTGDSPVSVAYQHVREDPIPPSA-----RHEGLSADLDAVVLKALAKNPENRYQ 267
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-21
Identities = 64/364 (17%), Positives = 111/364 (30%), Gaps = 113/364 (31%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVAL--KEIQNLIASDQH 526
R + + + + + KG G V G+++G +VAVK E+ N + +H
Sbjct: 4 RTVARDITLLECVGKGRYGEV-WRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML-RH 61
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLI--YVLSGSFEEQLNAKEQDSNLLNEVRIR 584
NI+ + SD + S + LI Y GS + L D
Sbjct: 62 ENILGFIA--SDMTSRHSSTQLW------LITHYHEMGSLYDYLQLTTLD---------- 103
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE--------IGLIHRDLKPQN 636
L++ I SGL+HLH + HRDLK +N
Sbjct: 104 -------------TV-------SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 637 VLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696
+L+ K+ ++D+G++ + L
Sbjct: 144 ILVKKN--GQCCIADLGLAVMHSQSTNQLDVGNNP------------------------- 176
Query: 697 VLFFTVGYGSSGWQAPE------QLLQGRQTRAIDLFSLG---------CILFFCITGGK 741
G+ + APE Q+ + +D+++ G + + K
Sbjct: 177 ------RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
Query: 742 HPYGE------SFERDANIVKDRK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788
P+ + SFE +V + F + L NP R A
Sbjct: 231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
Query: 789 QNVL 792
+
Sbjct: 291 LRIK 294
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 6e-21
Identities = 66/347 (19%), Positives = 115/347 (33%), Gaps = 115/347 (33%)
Query: 464 DRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHHDVA---- 513
+ +G + G + + + +G G V YE R VA+K + ++
Sbjct: 26 ESREGTQFGPYRL-RRLVGRGGMGDV-----YEAEDTVRERIVALKLM---SETLSSDPV 76
Query: 514 -----LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQL 568
+E + Q P++V + +Y+ + + +
Sbjct: 77 FRTRMQREART-AGRLQEPHVVPIHDFGEIDGQLYVDMR----------LI------NGV 119
Query: 569 NAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628
+ +L + L + + + R I S L H G
Sbjct: 120 DLAA----MLRR-QGPL------------------APPRAVAIVRQIGSALDAAHAAGAT 156
Query: 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688
HRD+KP+N+L+S D A L D GI+ LTQ G +
Sbjct: 157 HRDVKPENILVSADDF--AYLVDFGIASAT--TDEKLTQ--LGNTV-------------- 196
Query: 689 CECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GES 747
G T+ Y + PE+ + T D+++L C+L+ C+T G PY G+
Sbjct: 197 -------G----TLYYMA-----PERFSESHATYRADIYALTCVLYECLT-GSPPYQGDQ 239
Query: 748 -------FERDANIVKDRKDLFLVEHIPEAVD-LFTRLLDPNPDLRP 786
+ + IP A D + R + NP+ R
Sbjct: 240 LSVMGAHINQAIPRPST-----VRPGIPVAFDAVIARGMAKNPEDRY 281
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 71/344 (20%), Positives = 123/344 (35%), Gaps = 99/344 (28%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVA----LKEIQNLIASDQHPNIVRWY 533
E+ +G+ G V + G+ +AVKR+ T + L ++ + + P V +Y
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
G + V++ +E SL+ +V + + E+
Sbjct: 73 GALFREGDVWICMELMDTSLDKF---------------------YKQVIDKGQTIPED-- 109
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
L K+ IV L HLH ++ +IHRD+KP NVLI+ K+ D
Sbjct: 110 -------------ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ--VKMCDF 154
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GIS L D++ G + AP
Sbjct: 155 GISGYLVDDVAKDI---------------------------------DA---GCKPYMAP 178
Query: 713 EQLLQGRQ-----TRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKD-----RK 759
E++ ++ D++SLG + + PY F++ +V++
Sbjct: 179 ERINPELNQKGYSVKS-DIWSLGITMIELAI-LRFPYDSWGTPFQQLKQVVEEPSPQLPA 236
Query: 760 DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803
D F E VD ++ L N RP ++ HPFF +++
Sbjct: 237 DKF----SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK 276
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-21
Identities = 60/332 (18%), Positives = 109/332 (32%), Gaps = 93/332 (28%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVK----RLVKTHHDVALKEIQNLIASDQHPNIVR 531
+E+ G+ G V GR K + V EI ++ HP ++
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV-KNEIS-IMNQLHHPKLIN 112
Query: 532 WYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ D+ + L LE + L D I + ++E +
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIA--------------AEDYKMSEAEVINY---- 154
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
R GL H+HE ++H D+KP+N++ K+ K+
Sbjct: 155 ---------------------MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII 193
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G++ +L D V ++ +
Sbjct: 194 DFGLATKLNPDEI------------------------------------VKVTTATAEFA 217
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERD--ANIVKDRKDLFLVE-- 765
APE + + D++++G + + ++ G P GE + + N+ + + F +
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGED-DLETLQNVKRCDWE-FDEDAF 274
Query: 766 -HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHP 795
+ PEA D LL P R + L HP
Sbjct: 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 76/359 (21%), Positives = 135/359 (37%), Gaps = 97/359 (27%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQN----LIASDQHPNIVRWY 533
EI +G+ G+V + G+ +AVKR+ T + K++ ++ S P IV++Y
Sbjct: 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
G + ++ +E + S + K
Sbjct: 88 GALFREGDCWICMELMSTSFDKFY-----------------------------------K 112
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG-LIHRDLKPQNVLISKDKSFCAKLSDM 652
+ + P L K+T V L+HL E +IHRD+KP N+L+ + + KL D
Sbjct: 113 YVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN--IKLCDF 170
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
GIS +L ++ T++A G + AP
Sbjct: 171 GISGQLVDSIAK-TRDA-----------------------------------GCRPYMAP 194
Query: 713 EQLLQGRQ-----TRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKDR----KD 760
E++ R+ D++SLG L+ T G+ PY + F++ +VK +
Sbjct: 195 ERIDPSASRQGYDVRS-DVWSLGITLYELAT-GRFPYPKWNSVFDQLTQVVKGDPPQLSN 252
Query: 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR----LSFLRDVSDRVE 815
E P ++ L + RPK + +L HPF + R ++ + D++
Sbjct: 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMP 311
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 72/385 (18%), Positives = 127/385 (32%), Gaps = 105/385 (27%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK----RLVKTHHDVALK---EIQNL 520
+ IGK ++ + +GS G V + E AVK + ++ + EIQ L
Sbjct: 2 KLIGKYLM-GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 521 IASDQHPNIVRWYGV---ESDQDFVYLSLERCTCSLNDLI-YVLSGSFEEQLNAKEQDSN 576
H N+++ V E Q +Y+ +E C C + +++ V F
Sbjct: 61 RRLR-HKNVIQLVDVLYNEEKQK-MYMVMEYCVCGMQEMLDSVPEKRFPV---------- 108
Query: 577 LLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636
+ ++ GL +LH G++H+D+KP N
Sbjct: 109 --CQAH---------------------------GYFCQLIDGLEYLHSQGIVHKDIKPGN 139
Query: 637 VLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696
+L+ K+S +G ++ D +
Sbjct: 140 LLL--TTGGTLKISALG--------VAEALHPFAADDT---------CR-TSQ------- 172
Query: 697 VLFFTVGYGSSGWQAPEQLLQGRQT---RAIDLFSLGCILFFCITGGKHPYGESFERDAN 753
GS +Q PE + G T +D++S G L+ TG +P FE N
Sbjct: 173 --------GSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG-LYP----FE-GDN 217
Query: 754 IVK-----DRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 807
I K + + P DL +L+ P R + + H +F
Sbjct: 218 IYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAP 277
Query: 808 RDVSDRVELEDRESDSKLLRALEGI 832
+ + +DR ++ LE +
Sbjct: 278 VPIPPSPDTKDRWRSMTVVPYLEDL 302
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 2e-20
Identities = 67/380 (17%), Positives = 121/380 (31%), Gaps = 100/380 (26%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIA---SDQHP 527
+E+ G V G A K + + V+ +EI+ ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 528 NIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
N++ + V ++ V L LE + L D + S E+ E
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEE------------EAT---- 118
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSF 645
+ I+ G+++LH + H DLKP+N+++ K+
Sbjct: 119 -----------------------SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI 155
Query: 646 CA-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
KL D G++ + GV F + +
Sbjct: 156 PHIKLIDFGLAHE-----------------------------------IEDGVEFKNI-F 179
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERD-ANIVKDRKDL 761
G+ + APE + D++S+G I + ++G G++ + ANI D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDTKQETLANITSVSYD- 236
Query: 762 FLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF--WTADTRLSFLRDVSDRVE 815
F E H A D +LL R Q L HP+ + V +
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLEN 296
Query: 816 LEDRESDSKLLRALEGIALV 835
+ + + ++L
Sbjct: 297 FRKQYVRRRWKLSFSIVSLC 316
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} Length = 339 | Back alignment and structure |
|---|
Score = 92.9 bits (230), Expect = 2e-20
Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 30/201 (14%)
Query: 49 DVALVAALDGTIHLVDTKLGKIRWSF--GTGRPIYSSYQASFNSNASEFYLDVDEDWELY 106
D+ + A ++G +H VD + G I WS +P+ + S ++ D +Y
Sbjct: 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIY 70
Query: 107 FHSKRFGKMKKLSSSAEEYIRRMPYISK-------------DGGVTLGAMKTSVFLVDVK 153
+ + G ++KL S + + P K D V G+M+T ++ +++
Sbjct: 71 YFNAHQG-LQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML 129
Query: 154 SGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVL 213
+G ++ + G QS + + E ++ I +T + L
Sbjct: 130 NGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC------------ENMIVIGKTIFEL 177
Query: 214 QSTSQDSGEVLWNVAYADFKA 234
S D +NV Y+ ++
Sbjct: 178 GIHSYDGAS--YNVTYSTWQQ 196
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-20
Identities = 52/368 (14%), Positives = 112/368 (30%), Gaps = 127/368 (34%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALK----------------------E 516
+ + +G ++L + + A+K+ K+ + +
Sbjct: 37 RTLNQGKFNKIIL-CEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 517 IQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN 576
I I ++ + G+ ++ D VY+ E Y+ + + ++
Sbjct: 96 IITDI---KNEYCLTCEGIITNYDEVYIIYE----------YMEND----SILKFDEYFF 138
Query: 577 LLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQ 635
+L++ +P+ + + + +++ S++H E + HRD+KP
Sbjct: 139 VLDKNYTCFIPIQV-----------------IKCIIKSVLNSFSYIHNEKNICHRDVKPS 181
Query: 636 NVLISKDKSFCAKLSDMGISKRLQGDM---SCLTQNATGMDLQLVYLVSILLKLVICECV 692
N+L+ DK+ KLSD G S+ + S T ++
Sbjct: 182 NILM--DKNGRVKLSDFGESEYMVDKKIKGSRGTYE---------FM------------- 217
Query: 693 FQFGVLFFTVGYGSSGWQAPEQLLQGRQT---RAIDLFSLGCILFFCITG---------- 739
PE + +D++SLG L+
Sbjct: 218 ------------------PPE-FFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 740 ---------GKHPYGESFERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQ 789
Y + ++K + E +D L NP R ++
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 790 NVLNHPFF 797
+ L H +
Sbjct: 319 DALKHEWL 326
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 2e-20
Identities = 57/358 (15%), Positives = 115/358 (32%), Gaps = 117/358 (32%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYG 534
+ A+G G V VAVK E+ +L +H NI+++ G
Sbjct: 28 LLEVKARGRFGCVWK-AQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIG 85
Query: 535 VESDQDFVYLSLERCTCSLNDLI--YVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+++ + ++ LI + GS + L +N+++
Sbjct: 86 --AEKRGTSVDVDLW------LITAFHEKGSLSDFLK-----ANVVS------------- 119
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHE----------IGLIHRDLKPQNVLISKD 642
W +L + + GL++LHE + HRD+K +NVL+
Sbjct: 120 -----WN-------ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL--K 165
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
+ A ++D G++ + + S +
Sbjct: 166 NNLTACIADFGLALKFEAGKSAGDTHGQ-------------------------------- 193
Query: 703 GYGSSGWQAPEQL-----LQGRQTRAIDLFSLGCILFFCITG----------GKHPYGES 747
G+ + APE L Q ID++++G +L+ + P+ E
Sbjct: 194 -VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252
Query: 748 FERDANI-------VKDRKDLFLVEHIP--EAVDLFTRLL----DPNPDLRPKAQNVL 792
+ ++ V +K L ++ + + + D + + R A V
Sbjct: 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-20
Identities = 66/354 (18%), Positives = 118/354 (33%), Gaps = 98/354 (27%)
Query: 476 VFNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIASDQHPNI 529
+ +KE+ +G V G+ A K R + L EI L + P +
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 530 VRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+ + V + + L LE + L + + +++E +
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCL-------------PELAEMVSENDVI---- 134
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCA 647
++ + I+ G+ +LH+ ++H DLKPQN+L S
Sbjct: 135 ---------------------RLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDI 173
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+ D G+S++ + G+
Sbjct: 174 KIVDFGMSRK-----------------------------------IGHACELREI-MGTP 197
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGES----FERDANIVKDRKDL 761
+ APE L T A D++++G I + +T GE + NI + D
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTH--TSPFVGEDNQETYL---NISQVNVD- 251
Query: 762 FLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVS 811
+ E + A D LL NP+ RP A+ L+H + D F + +
Sbjct: 252 YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEET 305
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 3e-20
Identities = 60/363 (16%), Positives = 106/363 (29%), Gaps = 109/363 (30%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVAL--KEIQNLIASDQH 526
R I + +V + I KG G V G + G VAVK EI +H
Sbjct: 38 RTIARTIVLQESIGKGRFGEV-WRGKWRGEEVAVKIFSSREERSWFREAEIYQT-VMLRH 95
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
NI+ + ++ + + L + Y GS + LN
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSD------YHEHGSLFDYLNRYTVT------------ 137
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE--------IGLIHRDLKPQNVL 638
+ ++K+ SGL+HLH + HRDLK +N+L
Sbjct: 138 -----------VE-------GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 179
Query: 639 ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
+ K+ ++D+G++ R +
Sbjct: 180 VKKN--GTCCIADLGLAVRHDSATDTIDIAPNH--------------------------- 210
Query: 699 FFTVGYGSSGWQAPE------QLLQGRQTRAIDLFSLGCIL----FFCITGGKH-----P 743
G+ + APE + + D++++G + C GG H P
Sbjct: 211 ----RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266
Query: 744 YGESFERDAN-------IVKDR------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQN 790
Y + D + + + + E + + N R A
Sbjct: 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 326
Query: 791 VLN 793
+
Sbjct: 327 IKK 329
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 3e-20
Identities = 63/343 (18%), Positives = 110/343 (32%), Gaps = 96/343 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIA---SDQHPNI 529
+E+ G V G+ A K RL + V+ +EI+ + +HPNI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 530 VRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+ + + ++ V L LE + L D + S E E
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTED------------EAT------ 111
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS--KDKSFC 646
+ + I+ G+ +LH + H DLKP+N+++ +
Sbjct: 112 ---------------------QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 150
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
KL D GI+ +++ F +G+
Sbjct: 151 IKLIDFGIAHKIEAGNE------------------------------------FKNIFGT 174
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERDANIVKDRKDLFLV 764
+ APE + D++S+G I + ++G GE+ + + F
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGETKQETLTNISAVNYDFDE 232
Query: 765 EHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803
E+ A D RLL +P R L H + R
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 4e-20
Identities = 72/363 (19%), Positives = 113/363 (31%), Gaps = 111/363 (30%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKE--IQNLIASDQH 526
R I K + K+I KG G V G + G VAVK T +E I + +H
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEV-WMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM-RH 90
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
NI+ + + + L T Y +GS + L + D
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITD------YHENGSLYDYLKSTTLD------------ 132
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE--------IGLIHRDLKPQNVL 638
K +LK+ VSGL HLH + HRDLK +N+L
Sbjct: 133 -----------AK-------SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL 174
Query: 639 ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
+ K+ ++D+G++ + D + +
Sbjct: 175 VKKN--GTCCIADLGLAVKFISDTNEVDIPPNTR-------------------------- 206
Query: 699 FFTVGYGSSGWQAPEQLLQGRQ-------TRAIDLFSLG---------CILFFCITGGKH 742
G+ + PE +L D++S G C+ + +
Sbjct: 207 -----VGTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260
Query: 743 PYGE------SFERDANIVKDRK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQ 789
PY + S+E IV +K E + + L T NP R A
Sbjct: 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320
Query: 790 NVL 792
V
Sbjct: 321 RVK 323
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 4e-20
Identities = 65/378 (17%), Positives = 119/378 (31%), Gaps = 96/378 (25%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIA---SDQHP 527
+E+ G V G A K + + V +EI+ ++ HP
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 528 NIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
NI+ + V ++ V L LE + L D + S E+ E
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEE------------EAT---- 118
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSF 645
+ I+ G+++LH + H DLKP+N++ + K+
Sbjct: 119 -----------------------SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI 155
Query: 646 CA-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
KL D G++ + GV F + +
Sbjct: 156 PHIKLIDFGLAHE-----------------------------------IEDGVEFKNI-F 179
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP-YGESFERDANIVKDRKDLFL 763
G+ + APE + D++S+G I + ++ G P G++ + + F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITAVSYDFD 238
Query: 764 VE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF--WTADTRLSFLRDVSDRVELE 817
E A D +LL R Q L HP+ + V + +
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFK 298
Query: 818 DRESDSKLLRALEGIALV 835
+ + + ++L
Sbjct: 299 KQYVRRRWKLSFSIVSLC 316
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 5e-20
Identities = 71/337 (21%), Positives = 104/337 (30%), Gaps = 104/337 (30%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALK---------EIQNLI---ASDQ 525
+ KG GTV VA+K + + E+ L A
Sbjct: 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 526 HPNIVRWYGVESDQDFVYLSLER-CTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
HP ++R Q+ L LER L D I G E R
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-TEKGPLGE------------GPSR- 142
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+V+ + H H G++HRD+K +N+LI +
Sbjct: 143 --------------------------CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR 176
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
CAKL D G L + Y
Sbjct: 177 -GCAKLIDFGSGALLHDEP---------------YTDF-------D-------------- 199
Query: 704 YGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
G+ + PE + Q ++SLG +L+ + G P FERD I+ +L
Sbjct: 200 -GTRVYSPPE-WISRHQYHALPATVWSLGILLYDMVC-GDIP----FERDQEIL--EAEL 250
Query: 762 FLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
H+ P+ L R L P P RP + +L P+
Sbjct: 251 HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 7e-20
Identities = 73/379 (19%), Positives = 126/379 (33%), Gaps = 128/379 (33%)
Query: 462 IDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK-----RLVKTHHDVALK 515
D ++ + + EI KGS G V L N A+K +L++
Sbjct: 3 SGSSGDCVQLNQYTL-KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRP 61
Query: 516 EIQNLIASDQ-----------------------HPNIVRWYGV--ESDQDFVYLSLERCT 550
+ + HPN+V+ V + ++D +Y+ E
Sbjct: 62 PPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFE--- 118
Query: 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610
V G PVM ++ Q
Sbjct: 119 -------LVNQG------------------------PVM----EVP--TLKPLSEDQARF 141
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
+D++ G+ +LH +IHRD+KP N+L+ +D K++D G+S +G + L+
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSNTV- 198
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT----RAIDL 726
G+ + APE L + +A+D+
Sbjct: 199 ----------------------------------GTPAFMAPE-SLSETRKIFSGKALDV 223
Query: 727 FSLGCILFFCITGGKHPYGESFERDANIV----KDRKDLFLVEHI----PEAVDLFTRLL 778
+++G L +C G+ P F D I+ K + + DL TR+L
Sbjct: 224 WAMGVTL-YCFVFGQCP----FM-DERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRML 277
Query: 779 DPNPDLRPKAQNVLNHPFF 797
D NP+ R + HP+
Sbjct: 278 DKNPESRIVVPEIKLHPWV 296
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 8e-20
Identities = 61/338 (18%), Positives = 102/338 (30%), Gaps = 108/338 (31%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALK---------EIQNL-IASDQHP 527
+ G G+V VA+K + K + E+ L S
Sbjct: 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 528 NIVRWYGVESDQDFVYLSLERCTCS--LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
++R D L LER L D I G+ +E R
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQE------------ELAR--- 152
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
++ + H H G++HRD+K +N+LI ++
Sbjct: 153 ------------------------SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-G 187
Query: 646 CAKLSDMGISKRLQGDM---SCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
KL D G L+ +
Sbjct: 188 ELKLIDFGSGALLKDTVYTDFD-------------------------------------- 209
Query: 703 GYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKD 760
G+ + PE ++ + R+ ++SLG +L+ + G P FE D I++
Sbjct: 210 --GTRVYSPPE-WIRYHRYHGRSAAVWSLGILLYDMVC-GDIP----FEHDEEIIRG--Q 259
Query: 761 LFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+F + + E L L P RP + + NHP+
Sbjct: 260 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 8e-20
Identities = 75/345 (21%), Positives = 126/345 (36%), Gaps = 110/345 (31%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQ------NLIASDQHPNI 529
F K + +GS TVVL R A+K L K H + ++ ++++ HP
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEK-RHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V+ Y D + +Y L Y +G + + + +E R
Sbjct: 93 VKLYFTFQDDEKLYFGLS----------YAKNGELLKYI----RKIGSFDETCTRFY--- 135
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+A+ IVS L +LH G+IHRDLKP+N+L+ ++ ++
Sbjct: 136 ---------------TAE-------IVSALEYLHGKGIIHRDLKPENILL--NEDMHIQI 171
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLV----YLVSILLKLVICECVFQFGVLFFTVGYG 705
+D G +K L + N+ V Y+
Sbjct: 172 TDFGTAKVLSPESKQARANS------FVGTAQYV-------------------------- 199
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGES----FERDANIVKDRK 759
+PE L + ++ DL++LGCI++ + G P + F+ I+K
Sbjct: 200 -----SPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRAGNEYLIFQ---KIIKL-- 247
Query: 760 DLFLVEHI-PEAVDLFTRLLDPNPDLRP------KAQNVLNHPFF 797
+ E P+A DL +LL + R + HPFF
Sbjct: 248 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 9e-20
Identities = 63/339 (18%), Positives = 117/339 (34%), Gaps = 100/339 (29%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVK-----RLVKTHHDVALKEIQNLIA---SDQHP 527
+E+ G V G A K R + V+ ++I+ ++ QHP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 528 NIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
N++ + V ++ V L LE L D + S E
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTE-------------------- 113
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS--KDKS 644
++ + + I++G+ +LH + + H DLKP+N+++
Sbjct: 114 ------EEA-------------TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K+ D G++ + FG F + +
Sbjct: 155 PRIKIIDFGLAHK-----------------------------------IDFGNEFKNI-F 178
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGESFERD--ANIVKDRKD 760
G+ + APE + D++S+G I + ++G G++ +++ AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGDT-KQETLANVSAVNYE 235
Query: 761 LFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHP 795
F E+ A D RLL +P R Q+ L HP
Sbjct: 236 -FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 9e-20
Identities = 68/351 (19%), Positives = 116/351 (33%), Gaps = 107/351 (30%)
Query: 465 RVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH-------HDVALK- 515
+G K + G+ G V + E + V VK + K D L
Sbjct: 17 ACEGEYSQKYSTM-SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK 75
Query: 516 ---EIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS---LNDLIYVLSGSFEEQLN 569
EI L + +H NI++ + +Q F L +E+ S L I +E
Sbjct: 76 VTLEIAIL-SRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFI-DRHPRLDE--- 129
Query: 570 AKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629
+ R +VS + +L +IH
Sbjct: 130 ---------PLAS---------------------------YIFRQLVSAVGYLRLKDIIH 153
Query: 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689
RD+K +N++I + F KL D G +
Sbjct: 154 RDIKDENIVI--AEDFTIKLIDFGSAA--------------------------------- 178
Query: 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR--AIDLFSLGCILFFCITGGKHPYGES 747
+ G LF+T G+ + APE +L G R ++++SLG L+ + ++P
Sbjct: 179 --YLERGKLFYTF-CGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLVF-EENP---- 229
Query: 748 FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F V + + E + L + LL P P+ R + ++ P+
Sbjct: 230 FCELEETV--EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-19
Identities = 74/334 (22%), Positives = 124/334 (37%), Gaps = 101/334 (30%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVA-----LKEIQNLIASDQHPNIVRW 532
K I KG+ V L + GR VA+K + KT + +E++ + HPNIV+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM-KILNHPNIVKL 79
Query: 533 YGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ V + +YL +E + + D + V G +E E R
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKE------------KEAR--------- 117
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
R IVS + + H+ ++HRDLK +N+L+ D K++D
Sbjct: 118 ------------------SKFRQIVSAVQYCHQKRIVHRDLKAENLLL--DADMNIKIAD 157
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G S L C G+ + A
Sbjct: 158 FGFSNEFTVGG--------------------KLDA---FC-------------GAPPYAA 181
Query: 712 PEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE-HIP 768
PE L QG++ +D++SLG IL+ ++ G P F+ N+ + R+ + + IP
Sbjct: 182 PE-LFQGKKYDGPEVDVWSLGVILYTLVS-GSLP----FD-GQNLKELRERVLRGKYRIP 234
Query: 769 -----EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ +L R L NP R + ++ +
Sbjct: 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 3e-19
Identities = 71/397 (17%), Positives = 131/397 (32%), Gaps = 105/397 (26%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV-- 535
K + GS G V + E G+ A+K+ V +E+ ++ H NI++
Sbjct: 13 KTLGTGSFGIVCEVFDIESGKRFALKK-VLQDPRYKNRELD-IMKVLDHVNIIKLVDYFY 70
Query: 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT--K 593
+ + + + + + + LN + + + +T K
Sbjct: 71 TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI----MEYVPDTLHK 126
Query: 594 DIELWKANGHP---------SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
++ + +G QL + + +H +G+ HRD+KPQN+L+ +
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFR-------AVGFIHSLGICHRDIKPQNLLV--NSK 177
Query: 645 FCA-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
KL D G +K+L +V
Sbjct: 178 DNTLKLCDFGSAKKLIPSE-------------------------------------PSVA 200
Query: 704 YGSSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH-------------- 742
Y S + +APE +L + T +IDL+S+GC+ I G G+
Sbjct: 201 YICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT 260
Query: 743 PYGESFERDANIVKDRK----------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
P E R + + + A+DL ++L PDLR +
Sbjct: 261 PTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320
Query: 793 NHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRAL 829
HPFF LR+ + + + + +
Sbjct: 321 AHPFF-------DHLRNSYESEVKNNSNFPHGVNQNI 350
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 4e-19
Identities = 75/342 (21%), Positives = 111/342 (32%), Gaps = 119/342 (34%)
Query: 497 GRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550
VA+KR V+ D AL+EI L+ +H NIVR + V + L E C
Sbjct: 27 HEIVALKR-VRLDDDDEGVPSSALREI-CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84
Query: 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610
L +G + V+ L QLLK
Sbjct: 85 QDLKKYFDSCNGDLDP------------EIVKSFLF--------------------QLLK 112
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
GL H ++HRDLKPQN+LI+++ KL++ G+++ + C +
Sbjct: 113 -------GLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAE-- 161
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSL 729
V+ T+ Y + P+ L + + +ID++S
Sbjct: 162 ----------------VV------------TLWY-----RPPDVLFGAKLYSTSIDMWSA 188
Query: 730 GCILFFCITGGKHPY--GESFERD--------------------------ANIVKDRKDL 761
GCI G+ P G D
Sbjct: 189 GCIFAELANAGR-PLFPGND-VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 762 FLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
LV +P DL LL NP R A+ L HP+F
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 48/331 (14%), Positives = 102/331 (30%), Gaps = 96/331 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-----LKEIQNLIASDQHPNI 529
+ + I KG G V G + G VA++ + + +E+ +H N+
Sbjct: 35 LEIGELIGKGRFGQV-YHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAY-RQTRHENV 91
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
V + G + + C +L ++ +
Sbjct: 92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVN--------------------- 130
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ ++ ++IV G+ +LH G++H+DLK +NV K
Sbjct: 131 ------------------KTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK---VV 169
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D G+ + G + + + + G
Sbjct: 170 ITDFGLF-SISGVLQ-AGRREDKL----------------------------RIQNGWLC 199
Query: 709 WQAPEQLLQGRQ----------TRAIDLFSLGCILFFCITGGKHPY-GESFERDANIV-- 755
APE +++ ++ D+F+LG I + + P+ + E +
Sbjct: 200 HLAPE-IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA-REWPFKTQPAEAIIWQMGT 257
Query: 756 KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786
+ +L + E D+ + RP
Sbjct: 258 GMKPNLSQIGMGKEISDILLFCWAFEQEERP 288
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 6e-19
Identities = 79/388 (20%), Positives = 125/388 (32%), Gaps = 149/388 (38%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVR----WY 533
K I GS G V + G VA+K+ V +E+Q ++ H NIVR +Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQ-IMRKLDHCNIVRLRYFFY 117
Query: 534 GVESDQDFVYLSL--ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+D VYL+L + ++ + S + L + ++L
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRA-----------KQTLPVIYVKLY----- 161
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
QL + L+++H G+ HRD+KPQN+L+ D + KL D
Sbjct: 162 -------------MYQLFR-------SLAYIHSFGICHRDIKPQNLLLDPDTAVL-KLCD 200
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-Q 710
G +K+L V Y S + +
Sbjct: 201 FGSAKQLVRGE-------------------------------------PNVSYICSRYYR 223
Query: 711 APEQLLQGRQ-TRAIDLFSLGCI---------LF------------FCITG--------- 739
APE + T +ID++S GC+ +F + G
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 740 -------------GKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786
HP+ + F PEA+ L +RLL+ P R
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTP--------------PEAIALCSRLLEYTPTARL 329
Query: 787 KAQNVLNHPFFWTADTRLSFLRDVSDRV 814
H FF LRD + ++
Sbjct: 330 TPLEACAHSFF-------DELRDPNVKL 350
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 7e-19
Identities = 63/328 (19%), Positives = 102/328 (31%), Gaps = 95/328 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-----LKEIQNLIASDQHPNI 529
+ + I GS GTV +G + G VAVK L T E+ L +H NI
Sbjct: 26 ITVGQRIGSGSFGTV-YKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVL-RKTRHVNI 82
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+ + G S + + + C SL ++ FE +
Sbjct: 83 LLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMK--------------------- 120
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+L+ + R G+ +LH +IHRDLK N+ + + K
Sbjct: 121 ------------------KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 160
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+ D G++ + GS
Sbjct: 161 IGDFGLAT-----EKSRWSGSHQF----------------------------EQLSGSIL 187
Query: 709 WQAPEQLLQGRQ---TRAIDLFSLGCILFFCITGGKHPYGESFERDANIV----KDRKDL 761
W APE + + D+++ G +L+ +T G+ PY RD I
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGSLSPD 246
Query: 762 FLV--EHIPEAV-DLFTRLLDPNPDLRP 786
+ P+ + L L D RP
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERP 274
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 9e-19
Identities = 75/421 (17%), Positives = 133/421 (31%), Gaps = 108/421 (25%)
Query: 400 EHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFT 459
H + + + + N +S N + + L
Sbjct: 7 HHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDI 66
Query: 460 D----LIDDRVDGRRIGKL-----VVFNKEIAKGSNGTVVL-EGNYEGRSVAVK----RL 505
D R+ + G + V + + G G V E G +A K R
Sbjct: 67 PAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG 126
Query: 506 VKTHHDVALKEIQ---NLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS-LNDLIYVLS 561
+K +V EI L H N+++ Y ++ + L +E L D I S
Sbjct: 127 MKDKEEV-KNEISVMNQL----DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES 181
Query: 562 GSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621
+ E D + + I G+ H
Sbjct: 182 YNLTE--------------------------LDT-------------ILFMKQICEGIRH 202
Query: 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVS 681
+H++ ++H DLKP+N+L + K+ D G+++R +
Sbjct: 203 MHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK------------------ 244
Query: 682 ILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGK 741
V +G+ + APE + + D++S+G I + ++ G
Sbjct: 245 ------------------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS-GL 285
Query: 742 HP-YGESFERD--ANIVKDRKDLFLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNH 794
P G++ + + NI+ R D E I EA + ++LL R A L H
Sbjct: 286 SPFLGDN-DAETLNNILACRWD-LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343
Query: 795 P 795
P
Sbjct: 344 P 344
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-18
Identities = 72/360 (20%), Positives = 131/360 (36%), Gaps = 120/360 (33%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVRWYG 534
I +G+ G V N G + A+K+ ++ + ++EI +++ +H NIV+ Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKK-IRLEKEDEGIPSTTIREI-SILKELKHSNIVKLYD 67
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V + + L E L L+ V G E + LL
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES------------VTAKSFLL-------- 107
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
QLL G+++ H+ ++HRDLKPQN+LI+++ K++D G+
Sbjct: 108 ------------QLLN-------GIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGL 146
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ + T ++ T+ Y +AP+
Sbjct: 147 ARAFGIPVRKYTHE------------------IV------------TLWY-----RAPDV 171
Query: 715 LLQGRQ-TRAIDLFSLGCILFFCITGGKHPY--GESFERD--ANIVK------------- 756
L+ ++ + ID++S+GCI + G P G S E D I +
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG--TPLFPGVS-EADQLMRIFRILGTPNSKNWPNV 228
Query: 757 ----DRKDLF-------LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
F + +DL +++L +P+ R A+ L H +F +
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 67/359 (18%), Positives = 124/359 (34%), Gaps = 116/359 (32%)
Query: 497 GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551
GR VA+K+ +++ D +A++EI L+ +H N+V V + YL E
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREI-KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108
Query: 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611
++ D + E N L+ ++ L+ Q++
Sbjct: 109 TILDDL--------------ELFPNGLDYQVVQKY----------LF--------QIIN- 135
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
G+ H +IHRD+KP+N+L+S+ KL D G ++ L
Sbjct: 136 ------GIGFCHSHNIIHRDIKPENILVSQSGVV--KLCDFGFARTLAAPGEVYDD---- 183
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSL 729
V+ W +APE L+ + +A+D++++
Sbjct: 184 -------EVATR-------------------------WYRAPELLVGDVKYGKAVDVWAI 211
Query: 730 GCI---------LF---------FCI-------TGGKHPYGESFE--RDANIVKDRKDLF 762
GC+ LF + I + + ++
Sbjct: 212 GCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP 271
Query: 763 LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
L P +DL + L +PD RP +L+H FF F +++ +V+ +
Sbjct: 272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQLKVQKD 330
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 4e-18
Identities = 80/378 (21%), Positives = 131/378 (34%), Gaps = 119/378 (31%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
K++ KG+ G V + G VAVK++ + +EI L H NIV
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 533 YGV---ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V ++D+D VYL + L+ +I +N+L V + +
Sbjct: 75 LNVLRADNDRD-VYLVFDYMETDLHAVIR----------------ANILEPVHKQYV--- 114
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-K 648
++ QL+K + +LH GL+HRD+KP N+L++ + C K
Sbjct: 115 -------VY--------QLIK-------VIKYLHSGGLLHRDMKPSNILLNAE---CHVK 149
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D G+ + +I L + F T Y ++
Sbjct: 150 VADFGL--------------SRSFVNIRRVTNNIPLSINENTENFDDDQPILT-DYVATR 194
Query: 709 W-QAPEQLLQGRQ-TRAIDLFSLGCI---------LF------------FCITG------ 739
W +APE LL + T+ ID++SLGCI +F +
Sbjct: 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNED 254
Query: 740 -------------------GKHPYGESFERDANIVKDRKDLFLVEHI-PEAVDLFTRLLD 779
+ + + EA+DL +LL
Sbjct: 255 VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314
Query: 780 PNPDLRPKAQNVLNHPFF 797
NP+ R A + L HPF
Sbjct: 315 FNPNKRISANDALKHPFV 332
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 5e-18
Identities = 68/344 (19%), Positives = 109/344 (31%), Gaps = 122/344 (35%)
Query: 497 GRSVAVKRLVKTHHDV---------ALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
+ VA+K+ +K H AL+EI L+ HPNI+ + + L +
Sbjct: 35 NQIVAIKK-IKLGHRSEAKDGINRTALREI-KLLQELSHPNIIGLLDAFGHKSNISLVFD 92
Query: 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607
L +I S + ++ +L
Sbjct: 93 FMETDLEVIIKDNSLVLTP------------SHIKAYML--------------------M 120
Query: 608 LLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQ 667
L+ GL +LH+ ++HRDLKP N+L+ ++ KL+D G++K T
Sbjct: 121 TLQ-------GLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTH 171
Query: 668 NATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QAPEQLLQGRQ-TRAID 725
Q+V W +APE L R +D
Sbjct: 172 -------QVVTR-----------------------------WYRAPELLFGARMYGVGVD 195
Query: 726 LFSLGCILFFCITGGKHPY--GES--------FE----------------RDANIVKDRK 759
++++GCIL + P+ G+S FE D K
Sbjct: 196 MWAVGCILAELLLR--VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253
Query: 760 DLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ L + +DL L NP R A L +F
Sbjct: 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 6e-18
Identities = 77/363 (21%), Positives = 140/363 (38%), Gaps = 119/363 (32%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVRWYG 534
+ +G+ G V + +GR VA+KR ++ + A++EI +L+ HPNIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKR-IRLDAEDEGIPSTAIREI-SLLKELHHPNIVSLID 86
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V + + L E L ++ ++ ++++I L
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD------------SQIKIYLY-------- 126
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
QLL+ G++H H+ ++HRDLKPQN+LI+ D KL+D G+
Sbjct: 127 ------------QLLR-------GVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGL 165
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ + T V+ T+ Y +AP+
Sbjct: 166 ARAFGIPVRSYTHE------------------VV------------TLWY-----RAPDV 190
Query: 715 LLQGRQ-TRAIDLFSLGCILFFCITGGKHPY--GES--------FE-------------- 749
L+ ++ + ++D++S+GCI ITG P G + F
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITG--KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 750 --RDANIV--KDRKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
+ + IP E +DL + +L +P+ R A++ +NHP+F D
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
Query: 802 TRL 804
++
Sbjct: 309 PQI 311
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 8e-18
Identities = 78/356 (21%), Positives = 119/356 (33%), Gaps = 113/356 (31%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV--- 535
K I GS G V E VA+K+ V +E+Q ++ +HPN+V
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK-VLQDKRFKNRELQ-IMRIVKHPNVVDLKAFFYS 103
Query: 536 ---ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ D+ F+ L LE ++ + + + + I+L
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYA-----------KLKQTMPMLLIKLY------ 146
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
QLL+ L+++H IG+ HRD+KPQN+L+ KL D
Sbjct: 147 ------------MYQLLR-------SLAYIHSIGICHRDIKPQNLLLDPPSGVL-KLIDF 186
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QA 711
G +K L V Y S + +A
Sbjct: 187 GSAKILIAGE-------------------------------------PNVSYICSRYYRA 209
Query: 712 PEQLLQGRQ-TRAIDLFSLGCIL--------FFCITGGKH-----------PYGESFERD 751
PE + T ID++S GC++ F G P E +
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
Query: 752 ANIVKDRK----------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ K +F P+A+DL +RLL+ P R A L HPFF
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 1e-17
Identities = 70/363 (19%), Positives = 124/363 (34%), Gaps = 118/363 (32%)
Query: 497 GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551
VA+K ++ H+ A++E+ +L+ +H NIV + + + + L E
Sbjct: 27 DNLVALKE-IRLEHEEGAPCTAIREV-SLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK 84
Query: 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKV 611
L + + V++ L QLL+
Sbjct: 85 DLKQYLDDCGNIINM------------HNVKLFLF--------------------QLLR- 111
Query: 612 TRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671
GL++ H ++HRDLKPQN+LI++ KL+D G+++
Sbjct: 112 ------GLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYDNE--- 160
Query: 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLG 730
V+ T+ Y + P+ LL + ID++ +G
Sbjct: 161 ---------------VV------------TLWY-----RPPDILLGSTDYSTQIDMWGVG 188
Query: 731 CILFFCITGGKHPY--GES--------FE----------------RDANIVK--DRKDLF 762
CI + TG P G + F + +
Sbjct: 189 CIFYEMATG--RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEA 246
Query: 763 LVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELED 818
L+ H P + DL T+LL R A++ + HPFF + R+ L D + L++
Sbjct: 247 LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKE 306
Query: 819 RES 821
+
Sbjct: 307 IQL 309
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 67/360 (18%), Positives = 124/360 (34%), Gaps = 117/360 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
+I +GS G V N + G+ VA+K+ +++ D +AL+EI ++ +HPN+V
Sbjct: 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREI-RMLKQLKHPNLVNL 67
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + ++L E C ++ + ++ + E ++ +
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHEL--------------DRYQRGVPEHLVKSI------ 107
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
W Q L+ ++ H+ IHRD+KP+N+LI+K KL D
Sbjct: 108 ----TW--------QTLQ-------AVNFCHKHNCIHRDVKPENILITKHSVI--KLCDF 146
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW-QA 711
G ++ L G V+ W ++
Sbjct: 147 GFARLLTGPSDYYDD-----------EVATR-------------------------WYRS 170
Query: 712 PEQLLQGRQ-TRAIDLFSLGCI---------LF---------FCI-------TGGKHPYG 745
PE L+ Q +D++++GC+ L+ + I
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230
Query: 746 ESFE--RDANIVKDRKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ + I L P A+ L L +P R + +L+HP+F
Sbjct: 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 68/351 (19%), Positives = 111/351 (31%), Gaps = 126/351 (35%)
Query: 497 GRSVAVKRLVKTHHD---------VALKEIQNL--IASDQHPNIVRWYGVESDQDF---- 541
G VA+K V+ + ++E+ L + + +HPN+VR V +
Sbjct: 34 GHFVALKS-VRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREI 92
Query: 542 -VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600
V L E +QD L ++ L
Sbjct: 93 KVTLVFEHV----------------------DQD----------LRTYLDKAPPPGL--- 117
Query: 601 NGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQG 660
P+ + + R + GL LH ++HRDLKP+N+L++ KL+D G++ R+
Sbjct: 118 ---PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLA-RIYS 171
Query: 661 DMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ 720
LT +V+ T+ Y +APE LLQ
Sbjct: 172 YQMALTP------------------VVV------------TLWY-----RAPEVLLQSTY 196
Query: 721 TRAIDLFSLGCILFFCITGGKHPY--GES--------FE----------------RDANI 754
+D++S+GCI + P G S F+
Sbjct: 197 ATPVDMWSVGCIFAEMFR--RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 254
Query: 755 VKDRKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
+ +P L +L NP R A L H + +
Sbjct: 255 PPRGPR-PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 2e-17
Identities = 77/367 (20%), Positives = 139/367 (37%), Gaps = 114/367 (31%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVAL--KEIQNLIASDQHPNIVRWYGV 535
+++ +GS G+V + E G+ VA+K V D+ KEI + D P++V++YG
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIK-QVPVESDLQEIIKEISIMQQCD-SPHVVKYYGS 92
Query: 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+++ +E C S++D+I + + + E
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--------------------------- 125
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
++ + + + GL +LH + IHRD+K N+L++ + AKL+D G+
Sbjct: 126 ------------EIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH--AKLADFGV 171
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
+ +L M+ + T VI G+ W APE
Sbjct: 172 AGQLTDTMA---KRNT----------------VI----------------GTPFWMAPEV 196
Query: 715 LLQGRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFLVEHIP- 768
+ + D++SLG IT GK PY + + + +F++ P
Sbjct: 197 IQEIGYNCVADIWSLG------ITAIEMAEGKPPYAD--------IHPMRAIFMIPTNPP 242
Query: 769 -----------EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELE 817
D + L +P+ R A +L HPF +A +S LRD+ +
Sbjct: 243 PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG-VSILRDLINEAMDV 301
Query: 818 DRESDSK 824
+
Sbjct: 302 KLKRQES 308
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-17
Identities = 80/345 (23%), Positives = 124/345 (35%), Gaps = 119/345 (34%)
Query: 497 GRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551
G VA+K VK + A++EI +L+ +H NIVR Y V ++ + L E
Sbjct: 30 GVYVALKE-VKLDSEEGTPSTAIREI-SLMKELKHENIVRLYDVIHTENKLTLVFEFMDN 87
Query: 552 SLNDLIYVLSGSFEEQLNAKEQDSNL-LNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610
L + + L LN V+ QLL+
Sbjct: 88 DLKKYM--------DSRTVGNTPRGLELNLVKYFQW--------------------QLLQ 119
Query: 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNAT 670
GL+ HE ++HRDLKPQN+LI+K KL D G+++ ++ +
Sbjct: 120 -------GLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSE-- 168
Query: 671 GMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSL 729
V+ T+ Y +AP+ L+ R + +ID++S
Sbjct: 169 ----------------VV------------TLWY-----RAPDVLMGSRTYSTSIDIWSC 195
Query: 730 GCILFFCITGGKHPY--GES--------FE----------------RDANIV------KD 757
GCIL ITG P G + F+ N +D
Sbjct: 196 GCILAEMITG--KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRD 253
Query: 758 RKDLFLVEHIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
+ + +D LL NPD+R A+ L+HP+F
Sbjct: 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 61/364 (16%), Positives = 108/364 (29%), Gaps = 116/364 (31%)
Query: 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ-NLIASDQHPNIVRWYG 534
+ I +G G V +G+ + R VAVK + + E + +H NI R+
Sbjct: 16 KLLELIGRGRYGAV-YKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 535 VESDQDFVYLSLERCTCSLNDLI--YVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ + +E L+ Y +GS + L+ D
Sbjct: 75 GDE-RVTADGRMEYL------LVMEYYPNGSLXKYLSLHTSDWV---------------- 111
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHE---------IGLIHRDLKPQNVLISKDK 643
++ + GL++LH + HRDL +NVL+
Sbjct: 112 --------------SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV--KN 155
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
+SD G+S RL G+ + V
Sbjct: 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-------------------------- 189
Query: 704 YGSSGWQAPEQLLQGR--------QTRAIDLFSLGCIL------------FFCITGGKHP 743
G+ + APE +L+G + +D+++LG I + +
Sbjct: 190 -GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
Query: 744 YGESFERDANIVKDRKDLFLVEH----IPEAVDLFTRLL-----------DPNPDLRPKA 788
+ +D + L E PEA + + D + + R A
Sbjct: 248 FQTEVGNHPTF-EDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306
Query: 789 QNVL 792
Q
Sbjct: 307 QXAE 310
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 2e-17
Identities = 66/335 (19%), Positives = 123/335 (36%), Gaps = 98/335 (29%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVAL----KEIQNLIASDQHPNIVRWY 533
+ + +G+ G V L N +VAVK + KEI H N+V++Y
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFY 71
Query: 534 GVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G + + YL LE C+ L D I E + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE------------PDAQ---------- 108
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ +++G+ +LH IG+ HRD+KP+N+L+ D+ K+SD
Sbjct: 109 -----------------RFFHQLMAGVVYLHGIGITHRDIKPENLLL--DERDNLKISDF 149
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++ + + LL + C G+ + AP
Sbjct: 150 GLATVFRYNNR-----------------ERLLNKM-C---------------GTLPYVAP 176
Query: 713 EQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE----- 765
E LL+ R+ +D++S G +L + G+ P +++ ++ ++ D +
Sbjct: 177 E-LLKRREFHAEPVDVWSCGIVLTAMLA-GELP----WDQPSDSCQEYSDWKEKKTYLNP 230
Query: 766 --HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
I + L ++L NP R ++ ++
Sbjct: 231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 72/347 (20%), Positives = 117/347 (33%), Gaps = 121/347 (34%)
Query: 497 GRSVAVKRLVKTHHDV------ALKEIQNL--IASDQHPNIVRWYGV-----ESDQDFVY 543
GR VA+KR V+ ++E+ L + + +HPN+VR + V + +
Sbjct: 37 GRFVALKR-VRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGH 603
L E +QD L ++ + +
Sbjct: 96 LVFEHV----------------------DQD----------LTTYLDKVPEPGV------ 117
Query: 604 PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS 663
P+ + + ++ GL LH ++HRDLKPQN+L++ KL+D G++ R+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSFQM 174
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
LT +V+ T+ Y +APE LLQ
Sbjct: 175 ALTS------------------VVV------------TLWY-----RAPEVLLQSSYATP 199
Query: 724 IDLFSLGCILFFCITGGKHPY--GES--------FE----------------RDANIVKD 757
+DL+S+GCI + P G S +
Sbjct: 200 VDLWSVGCIFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK 257
Query: 758 RKDLF--LVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
V I DL + L NP R A + L+HP+F +
Sbjct: 258 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 4e-17
Identities = 58/274 (21%), Positives = 101/274 (36%), Gaps = 79/274 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS--VAVKRLVKTHHDVA--LKEIQNLIASDQHPNIV 530
+ ++ G G V EG ++ S VAVK L + +V LKE + +HPN+V
Sbjct: 222 ITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM-KEIKHPNLV 279
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ GV + + Y+ E ++ G+ + L +E + +
Sbjct: 280 QLLGVCTREPPFYIITE----------FMTYGNLLDYL--RECNRQEV------------ 315
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ LL + I S + +L + IHR+L +N L+ ++ K++
Sbjct: 316 -------------SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN--HLVKVA 360
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+S+ + GD Y K I W
Sbjct: 361 DFGLSRLMTGD---------------TYTAHAGAKFPI-------------------KWT 386
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
APE L + + D+++ G +L+ T G PY
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 4e-17
Identities = 80/370 (21%), Positives = 131/370 (35%), Gaps = 105/370 (28%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVA---LKEIQNLIASDQHPNIVRWYG 534
K + G NG V + + + VA+K++V T L+EI+ +I H NIV+ +
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK-IIRRLDHDNIVKVFE 75
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ LN +Y++ E L + L E RL
Sbjct: 76 ILGPSGSQLTDDVGSLTELNS-VYIVQEYMETDLANVLE-QGPLLEEHARLF-------- 125
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-KLSDMG 653
++ QLL+ GL ++H ++HRDLKP N+ I + K+ D G
Sbjct: 126 --MY--------QLLR-------GLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFG 166
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ R+ + + LV T Y ++P
Sbjct: 167 LA-RIMDPHYSHKGHLSE------GLV--------------------TKWY-----RSPR 194
Query: 714 QLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PYGESFERDAN 753
LL T+AID+++ GCI +TG G H + E + +
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS 254
Query: 754 IVKD---------RKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802
++ K L L EAVD ++L +P R A+ L+HP+
Sbjct: 255 VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY------ 308
Query: 803 RLSFLRDVSD 812
+S D
Sbjct: 309 -MSIYSFPMD 317
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 5e-17
Identities = 70/382 (18%), Positives = 123/382 (32%), Gaps = 120/382 (31%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKR--LVKTHHDVALKEIQNLI---ASDQHPNIVRW 532
+EI GS G V + VA+K+ + ++I + +HPN +++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G + +L +E C S +DL+ V +E
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV------------------------- 154
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
++ VT + GL++LH +IHRD+K N+L+S+ KL D
Sbjct: 155 --------------EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDF 198
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G + S + + + G+ W AP
Sbjct: 199 GSA-------SIMAPANS----------------FV----------------GTPYWMAP 219
Query: 713 EQLLQGRQTR---AIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFLV 764
E +L + + +D++SLG IT K P + L+ +
Sbjct: 220 EVILAMDEGQYDGKVDVWSLG------ITCIELAERKPPLFN--------MNAMSALYHI 265
Query: 765 -----------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
+ L P RP ++ +L H F + + D+ R
Sbjct: 266 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE-RPPTVIMDLIQR 324
Query: 814 VELEDRESDSKLLRALEGIALV 835
+ RE D+ R ++ I
Sbjct: 325 TKDAVRELDNLQYRKMKKILFQ 346
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 6e-17
Identities = 72/344 (20%), Positives = 130/344 (37%), Gaps = 102/344 (29%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH---HDVALK---EIQNLI 521
R IG ++ + + +GS G V L +Y+ + VA+K + + D+ ++ EI L
Sbjct: 6 RHIGPYII-RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL- 63
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+HP+I++ Y V + + + +E L D I V E +E
Sbjct: 64 KLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYI-VEKKRMTE------------DEG 110
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
R + + I+ + + H ++HRDLKP+N+L+
Sbjct: 111 R---------------------------RFFQQIICAIEYCHRHKIVHRDLKPENLLL-- 141
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
D + K++D G+S + LK C
Sbjct: 142 DDNLNVKIADFGLSNIMTDGN--------------------FLKTS-C------------ 168
Query: 702 VGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK 759
GS + APE ++ G+ +D++S G +L+ + G+ P F+ D I K
Sbjct: 169 ---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLV-GRLP----FD-DEFIPNLFK 218
Query: 760 -----DLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ + + P A L R++ +P R Q + P+F
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 7e-17
Identities = 76/370 (20%), Positives = 128/370 (34%), Gaps = 134/370 (36%)
Query: 481 IAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDV------ALKEIQNLIASDQHPN 528
+ +G+ G V Y+ VA+KR ++ H+ A++E+ +L+ QH N
Sbjct: 42 LGEGTYGEV-----YKAIDTVTNETVAIKR-IRLEHEEEGVPGTAIREV-SLLKELQHRN 94
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL-LNEVRIRLLP 587
I+ V ++L E L + D N ++ I+
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAENDLKKYM----------------DKNPDVSMRVIKSF- 137
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF-- 645
QL+ G++ H +HRDLKPQN+L+S +
Sbjct: 138 -----------------LYQLIN-------GVNFCHSRRCLHRDLKPQNLLLSVSDASET 173
Query: 646 -CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K+ D G+++ + T +I T+ Y
Sbjct: 174 PVLKIGDFGLARAFGIPIRQFTHE------------------II------------TLWY 203
Query: 705 GSSGWQAPEQLLQGRQ-TRAIDLFSLGCI---------LF------------FCITG--- 739
+ PE LL R + ++D++S+ CI LF F + G
Sbjct: 204 -----RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 740 -------GKHP-YGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNV 791
P + +SF + K K + E +DL T +L+ +P R A+N
Sbjct: 259 DTTWPGVTALPDWKQSFPKFRG--KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA 316
Query: 792 LNHPFFWTAD 801
L HP+F D
Sbjct: 317 LEHPYFSHND 326
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 8e-17
Identities = 64/341 (18%), Positives = 108/341 (31%), Gaps = 120/341 (35%)
Query: 476 VFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYG 534
V ++ + G NG V+ A+K L A +E++ + Q P+IVR
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVD 78
Query: 535 V----ESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V + + + + +E L I +++ E
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRI-------------QDRGDQAFTE--------- 116
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL-ISKDKSFCAK 648
++ +++++K I + +LH I + HRD+KP+N+L SK + K
Sbjct: 117 ---RE----------ASEIMK---SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L+D G +K G+ Y S
Sbjct: 161 LTDFGFAKETTGE-----------------------------------------KYDKS- 178
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFF--CITGGKHP-YGESFERDANIVKDR----KDL 761
D++SLG I++ C G P Y + +K R +
Sbjct: 179 ---------------CDMWSLGVIMYILLC---GYPPFYSNHGLAISPGMKTRIRMGQYE 220
Query: 762 FLVE---HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
F + E L LL P R +NHP W
Sbjct: 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP--W 259
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 8e-17
Identities = 66/335 (19%), Positives = 123/335 (36%), Gaps = 98/335 (29%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVAL----KEIQNLIASDQHPNIVRWY 533
+ + +G+ G V L N +VAVK + KEI H N+V++Y
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFY 71
Query: 534 GVESDQDFVYLSLERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
G + + YL LE C+ L D I E + +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE------------PDAQ---------- 108
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ +++G+ +LH IG+ HRD+KP+N+L+ D+ K+SD
Sbjct: 109 -----------------RFFHQLMAGVVYLHGIGITHRDIKPENLLL--DERDNLKISDF 149
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++ + + LL + C G+ + AP
Sbjct: 150 GLATVFRYNNR-----------------ERLLNKM-C---------------GTLPYVAP 176
Query: 713 EQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE----- 765
E LL+ R+ +D++S G +L + G+ P +++ ++ ++ D +
Sbjct: 177 E-LLKRREFHAEPVDVWSCGIVLTAMLA-GELP----WDQPSDSCQEYSDWKEKKTYLNP 230
Query: 766 --HI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
I + L ++L NP R ++ ++
Sbjct: 231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 9e-17
Identities = 74/400 (18%), Positives = 133/400 (33%), Gaps = 125/400 (31%)
Query: 462 IDDRVDGRRIGKLVVFNKEIAKGSNGT--VVLEG----NYEGRSVAVKRLVKTHHDV-AL 514
++ R +F E K GT V + + + A+K++ T + A
Sbjct: 7 FKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC 66
Query: 515 KEIQNLIASDQHPNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKE 572
+EI L+ +HPN++ V V+L + E
Sbjct: 67 REIA-LLRELKHPNVISLQKVFLSHADRKVWLLFDYA----------------------E 103
Query: 573 QDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK-VTRDIVSGLSHLHEIGLIHRD 631
D L +++ + + K ++K + I+ G+ +LH ++HRD
Sbjct: 104 HD----------LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD 153
Query: 632 LKPQNVLISKDKSF--CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689
LKP N+L+ + K++DMG ++ + L L +V+
Sbjct: 154 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD---------------LDPVVV- 197
Query: 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCI---------LF----- 734
T Y +APE LL R T+AID++++GCI +F
Sbjct: 198 -----------TFWY-----RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 735 ----------------FCITG----------GKHPYGESFE---RDANIVKDRKDLFLVE 765
F + G K P + R ++ +
Sbjct: 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 301
Query: 766 HIP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
H +A L +LL +P R ++ + P+F
Sbjct: 302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 1e-16
Identities = 76/344 (22%), Positives = 131/344 (38%), Gaps = 101/344 (29%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH---HDVALK---EIQNLI 521
+IG V+ + G+ G V + + G VAVK L + DV K EIQNL
Sbjct: 8 VKIGHYVL-GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL- 65
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+HP+I++ Y V S ++ +E YV G + + + + E+
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVME----------YVSGGELFDYICKHGR----VEEM 111
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
R ++ + I+S + + H ++HRDLKP+NVL+
Sbjct: 112 EAR-------------------------RLFQQILSAVDYCHRHMVVHRDLKPENVLL-- 144
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
D AK++D G+S + L+ C
Sbjct: 145 DAHMNAKIADFGLSNMMSDGE--------------------FLRTS-C------------ 171
Query: 702 VGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK 759
GS + APE ++ GR +D++S G IL+ + G P F+ D ++ K
Sbjct: 172 ---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLC-GTLP----FD-DEHVPTLFK 221
Query: 760 -----DLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
++ E++ L +L +P R +++ H +F
Sbjct: 222 KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-16
Identities = 74/351 (21%), Positives = 117/351 (33%), Gaps = 123/351 (35%)
Query: 497 GRSVAVKRLVKTHHD------VALKEIQNLIASDQHPNIVRWYGV--------ESDQDFV 542
G+ VA+K+ V ++ AL+EI+ L H N+V + + +
Sbjct: 42 GQKVALKK-VLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGSI 99
Query: 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQD-SNLLNEVRIRLLPVMENTKDIELWKAN 601
YL + C E D + LL+ V ++ K +
Sbjct: 100 YLVFDFC----------------------EHDLAGLLSNVLVKFTL--SEIKRVMQ---- 131
Query: 602 GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGD 661
LL GL ++H ++HRD+K NVLI++D KL+D G+++
Sbjct: 132 -----MLLN-------GLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLA 177
Query: 662 MSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ- 720
+ T V+ T+ Y + PE LL R
Sbjct: 178 KNSQPNRYTN--------------RVV------------TLWY-----RPPELLLGERDY 206
Query: 721 TRAIDLFSLGCI---------LF------------FCITG----------GKHPYGESFE 749
IDL+ GCI + + G + E E
Sbjct: 207 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 266
Query: 750 RDANIVKDRKDLF-LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ KD P A+DL +LL +P R + + LNH FFW+
Sbjct: 267 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 53/194 (27%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
+V L +L +IHRD+KP N+L+ D+ ++D I+ L + T
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILL--DEHGHVHITDFNIAAMLPRETQITT-------- 173
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ---TRAIDLFSLGC 731
+ G+ + APE + + A+D +SLG
Sbjct: 174 -------------MA---------------GTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205
Query: 732 ILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI-------PEAVDLFTRLLDPNPDL 784
+ + G+ PY R + K+ F + E V L +LL+PNPD
Sbjct: 206 TAYELLR-GRRPY---HIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQ 261
Query: 785 R-PKAQNVLNHPFF 797
R + +V N P+
Sbjct: 262 RFSQLSDVQNFPYM 275
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 79/374 (21%), Positives = 129/374 (34%), Gaps = 128/374 (34%)
Query: 479 KEIAKGSNGTVVLEGNYEGR------SVAVKRLVKTHHDVALKEIQNLI---ASDQHPNI 529
++I KGS G V ++G VA+K + + +++IQ I + P +
Sbjct: 28 EKIGKGSFGEV-----FKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++YG +++ +E S DL+ + L+E +I
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL----------------EPGPLDETQIAT--- 123
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ R+I+ GL +LH IHRD+K NVL+S+ K
Sbjct: 124 ----------------------ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VK 159
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L+D G++ +L + T F G+
Sbjct: 160 LADFGVAGQLTDTQI---KRNT-----------------------------FV---GTPF 184
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFL 763
W APE + Q D++SLG IT G+ P+ E + K LFL
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLG------ITAIELARGEPPHSE--------LHPMKVLFL 230
Query: 764 VEHIP-------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDV 810
IP + L+ P RP A+ +L H F + S+L ++
Sbjct: 231 ---IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTEL 287
Query: 811 SDRVELEDRESDSK 824
DR + E
Sbjct: 288 IDRYKRWKAEQSHD 301
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 74/388 (19%), Positives = 126/388 (32%), Gaps = 141/388 (36%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV--------------ALKEIQNLIASD 524
+ I+ GS G V + EG VA+KR+ T D L+EI+ L+
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR-LLNHF 86
Query: 525 QHPNIVRWYGV---ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
HPNI+ + + +YL E L +I+ +++
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--------------DQRIVIS 132
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
I+ ++ +L GL LHE G++HRDL P N+L+
Sbjct: 133 PQHIQYF----------MY--------HILL-------GLHVLHEAGVVHRDLHPGNILL 167
Query: 640 SKDKSFCA-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
+ + + D ++ R + T
Sbjct: 168 ADN---NDITICDFNLA-REDTADANKT-------------------------------- 191
Query: 699 FFTVGYGSSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------- 742
Y + W +APE ++Q + T+ +D++S GC++ G
Sbjct: 192 ----HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 743 ----------------PYGESFERDANIVKDRKDLFLV--EHIPEAVDLFTRLLDPNPDL 784
P + R++ + V P A+DL ++L+ NP
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 785 RPKAQNVLNHPFFWTADTRLSFLRDVSD 812
R + L HP+F L D D
Sbjct: 308 RISTEQALRHPYF-------ESLFDPLD 328
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 88/387 (22%), Positives = 128/387 (33%), Gaps = 139/387 (35%)
Query: 479 KEIAKGSNGTVVLEGNYEGR------SVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIV 530
+ + G+ G V Y+GR A+K + T + +EI L H NI
Sbjct: 30 ELVGNGTYGQV-----YKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 531 RWYG------VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
+YG D ++L +E C S+ DLI K N L E I
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI-------------KNTKGNTLKEEWI 131
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+ R+I+ GLSHLH+ +IHRD+K QNVL++++
Sbjct: 132 AY-------------------------ICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 166
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
KL D G+S +L + + T I
Sbjct: 167 E--VKLVDFGVSAQLDRTVG---RRNT----------------FI--------------- 190
Query: 704 YGSSGWQAPEQLLQGRQTRA-----IDLFSLGCILFFCITG-----GKHPYGESFERDAN 753
G+ W APE + A DL+SLG IT G P +
Sbjct: 191 -GTPYWMAPEVIACDENPDATYDFKSDLWSLG------ITAIEMAEGAPPLCD------- 236
Query: 754 IVKDRKDLFLVEHIP--------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ + LFL IP + L N RP + ++ HPF
Sbjct: 237 -MHPMRALFL---IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
Query: 800 ADTR---LSFLRDVSDRVELEDRESDS 823
L+D DR + + E D
Sbjct: 293 QPNERQVRIQLKDHIDRTKKKRGEKDE 319
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 3e-16
Identities = 72/353 (20%), Positives = 118/353 (33%), Gaps = 103/353 (29%)
Query: 463 DDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVA--LKEIQN 519
D + K+I G+ G L + VAVK + + +EI N
Sbjct: 11 LDMPIMHDSDRYDF-VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIIN 69
Query: 520 LIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLL 578
S +HPNIVR+ V + + +E + L + I +G F E
Sbjct: 70 H-RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-CNAGRFSE------------ 115
Query: 579 NEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL 638
+E R + ++SG+S+ H + + HRDLK +N L
Sbjct: 116 DEAR---------------------------FFFQQLLSGVSYCHSMQICHRDLKLENTL 148
Query: 639 ISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698
+ + K+ D G SK K
Sbjct: 149 LDGSPAPRLKICDFGYSKSSVLHS--------------------QPKST-V--------- 178
Query: 699 FFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK 756
G+ + APE +L ++ + D++S G L+ + G +P FE D +
Sbjct: 179 ------GTPAYIAPE-VLLRQEYDGKIADVWSCGVTLYVMLV-GAYP----FE-DPEEPR 225
Query: 757 D-RKDLFLVE----HIP-------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D RK + + IP E L +R+ +P R + H +F
Sbjct: 226 DYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 4e-16
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 50/193 (25%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I+ GL H+H +++RDLKP N+L+ D+ ++SD+G++ + G
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKK---PHASVG--- 352
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCIL 733
T GY APE L +G + D FSLGC+L
Sbjct: 353 --------------------------THGY-----MAPEVLQKGVAYDSSADWFSLGCML 381
Query: 734 FFCITGGKHPYGESFERDANIVKDR---KDLFLVEHI-PEAVDLFTRLLDPNPDLR---- 785
F + G P+ + +D + + + L + PE L LL + + R
Sbjct: 382 FKLLR-GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 786 -PKAQNVLNHPFF 797
AQ V PFF
Sbjct: 441 GRGAQEVKESPFF 453
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 5e-16
Identities = 61/340 (17%), Positives = 101/340 (29%), Gaps = 59/340 (17%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYG 534
E+ G+ G V + G +A K + +I ++ P IV +YG
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 535 VESDQDFVYLSLERC-TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+ + +E SL D + +G EQ
Sbjct: 99 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ-------------------------- 131
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG-LIHRDLKPQNVLISKDKSFCAKLSDM 652
L KV+ ++ GL++L E ++HRD+KP N+L++ KL D
Sbjct: 132 -------------ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDF 176
Query: 653 GISKRLQGDMS-----CLTQNATGMDLQLVYLVSI---LLKLVICECVFQFGVLFFTVGY 704
G+S +L M+ + + Y V + L + E G
Sbjct: 177 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA--VGRYPIPPPD 234
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
++G P FE IV +
Sbjct: 235 AKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS 294
Query: 765 EHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803
E D + L NP R + ++ H F +D
Sbjct: 295 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 334
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 6e-16
Identities = 84/380 (22%), Positives = 139/380 (36%), Gaps = 137/380 (36%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ + G+ G V + G VA+K+L + A +E++ L+ +H N++
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMRHENVIGL 89
Query: 533 YGV----ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
V E+ DF YL + L L+ L E RI+ L
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK----------------HEKLGEDRIQFL 133
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
++ Q+LK GL ++H G+IHRDLKP N+ +++D C
Sbjct: 134 ----------VY--------QMLK-------GLRYIHAAGIIHRDLKPGNLAVNED---C 165
Query: 647 A-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G++++ +M+ GY
Sbjct: 166 ELKILDFGLARQADSEMT---------------------------------------GYV 186
Query: 706 SSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PY 744
+ W +APE +L + T+ +D++S+GCI+ ITG G P
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
Query: 745 GESFERDANI----------VKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
E +R + ++KD L P AV+L ++L + + R A L
Sbjct: 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306
Query: 793 NHPFFWTADTRLSFLRDVSD 812
HP+F L D D
Sbjct: 307 AHPYF-------ESLHDTED 319
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 6e-16
Identities = 48/198 (24%), Positives = 76/198 (38%), Gaps = 50/198 (25%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
IVSGL HLH+ +I+RDLKP+NVL+ D ++SD+G++ L+ + T+ G
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLL--DDDGNVRISDLGLAVELKAGQT-KTKGYAG--- 351
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
T G+ APE LL ++D F+LG L+
Sbjct: 352 --------------------------TPGF-----MAPELLLGEEYDFSVDYFALGVTLY 380
Query: 735 FCITGGKHP--YGESFERDANIVKDR---KDLFLVEHI-PEAVDLFTRLLDPNPDLR--- 785
I + + +K R + + + P + D LL +P+ R
Sbjct: 381 EMIAA--RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGF 438
Query: 786 --PKAQNVLNHPFFWTAD 801
+ HP F
Sbjct: 439 RDGSCDGLRTHPLFRDIS 456
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 1e-15
Identities = 58/273 (21%), Positives = 102/273 (37%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVK--THHDVALKEIQNLIASDQHPNIVR 531
+ ++ +G G V G + G VA+K L + L+E Q + +H +V+
Sbjct: 269 LRLEVKLGQGCFG-EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM-KKLRHEKLVQ 326
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
Y V S++ +Y+ E Y+ GS + L K + L
Sbjct: 327 LYAVVSEEP-IYIVTE----------YMSKGSLLDFL--KGETGKYL------------- 360
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
QL+ + I SG++++ + +HRDL+ N+L+ ++ K++D
Sbjct: 361 ------------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN--LVCKVAD 406
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ ++ + Y K I W A
Sbjct: 407 FGLARLIEDN---------------EYTARQGAKFPI-------------------KWTA 432
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE L GR T D++S G +L T G+ PY
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 1e-15
Identities = 71/357 (19%), Positives = 118/357 (33%), Gaps = 116/357 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIA---SDQHPNIVRWYG 534
+I +GS G V L GR VAVK + + + N + QH N+V Y
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKM-MDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+ +++ +E +L D++ LNE +I
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIV----------------SQVRLNEEQIAT-------- 145
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
V ++ L++LH G+IHRD+K ++L++ D KLSD G
Sbjct: 146 -----------------VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR--VKLSDFG 186
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ D+ + + LV G+ W APE
Sbjct: 187 FCAQISKDVP---KRKS-----LV---------------------------GTPYWMAPE 211
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFLV---- 764
+ + +D++SLG I G+ PY + + +
Sbjct: 212 VISRSLYATEVDIWSLG------IMVIEMVDGEPPYFS--------DSPVQAMKRLRDSP 257
Query: 765 --------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
+ P D R+L +P R AQ +L+HPF L +
Sbjct: 258 PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL-PECLVPLIQL 313
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 82/376 (21%), Positives = 144/376 (38%), Gaps = 101/376 (26%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTH---HDVALK---EIQNLI 521
+IG ++ + G+ G V + + G VAVK L + DV K EIQNL
Sbjct: 13 VKIGHYIL-GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL- 70
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+HP+I++ Y V S +++ +E YV G + + + L+E
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVME----------YVSGGELFDYICKNGR----LDEK 116
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
R ++ + I+SG+ + H ++HRDLKP+NVL+
Sbjct: 117 ESR-------------------------RLFQQILSGVDYCHRHMVVHRDLKPENVLL-- 149
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
D AK++D G+S + L+ C
Sbjct: 150 DAHMNAKIADFGLSNMMSDGE--------------------FLRTS-C------------ 176
Query: 702 VGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK 759
GS + APE ++ GR +D++S G IL+ + G P F+ D ++ K
Sbjct: 177 ---GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLC-GTLP----FD-DDHVPTLFK 226
Query: 760 -----DLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
+ +++ P + L +L +P R +++ H +F + F D S
Sbjct: 227 KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYS 286
Query: 814 VELEDRESDSKLLRAL 829
+ D E+ ++
Sbjct: 287 STMIDDEALKEVCEKF 302
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 58/273 (21%), Positives = 102/273 (37%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVK--THHDVALKEIQNLIASDQHPNIVR 531
+ ++ +G G V G + G VA+K L + L+E Q + +H +V+
Sbjct: 186 LRLEVKLGQGCFG-EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM-KKLRHEKLVQ 243
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
Y V S++ +Y+ E Y+ GS + L K + L
Sbjct: 244 LYAVVSEEP-IYIVTE----------YMSKGSLLDFL--KGETGKYL------------- 277
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
QL+ + I SG++++ + +HRDL+ N+L+ ++ K++D
Sbjct: 278 ------------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN--LVCKVAD 323
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ ++ + Y K I W A
Sbjct: 324 FGLARLIEDN---------------EYTARQGAKFPI-------------------KWTA 349
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE L GR T D++S G +L T G+ PY
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 1e-15
Identities = 77/382 (20%), Positives = 126/382 (32%), Gaps = 130/382 (34%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNL--IASDQHPNIVRWYGV 535
+ +G+ GTV L G SVA+K+ V +E+Q + +A HPNIV+
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKK-VIQDPRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 536 -----ESDQDFVYLSL--ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
E D+ +YL++ E +L+ ++ + I++
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPDTLHRCC--------RNYYRRQVA---PPPILIKVF-- 134
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE--IGLIHRDLKPQNVLISKDKSFC 646
QL++ + LH + + HRD+KP NVL+ +++
Sbjct: 135 ----------------LFQLIR-------SIGCLHLPSVNVCHRDIKPHNVLV--NEADG 169
Query: 647 A-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
KL D G +K+L V Y
Sbjct: 170 TLKLCDFGSAKKLSPSE-------------------------------------PNVAYI 192
Query: 706 SSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PY 744
S + +APE + + T A+D++S+GCI + G G + P
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
Query: 745 GESFERDANIVKDRKDLFLVEH-------------IPEAVDLFTRLLDPNPDLRPKAQNV 791
E + D EA DL + LL P+ R K
Sbjct: 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312
Query: 792 LNHPFFWTADTRLSFLRDVSDR 813
L HP+F L D + +
Sbjct: 313 LCHPYF-------DELHDPATK 327
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 84/369 (22%), Positives = 132/369 (35%), Gaps = 125/369 (33%)
Query: 479 KEIAKGSNGTVVLEGNYEGR------SVAVKR--LVKTHHDVAL--KEIQNLIASDQHPN 528
+ I G+ V VA+KR L K + KEIQ + HPN
Sbjct: 21 EVIGSGATAVV-----QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH-HPN 74
Query: 529 IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
IV +Y +D ++L ++ + S+ D+I + + E S +L+E I
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDII-------KHIVAKGEHKSGVLDESTIAT-- 125
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+ R+++ GL +LH+ G IHRD+K N+L+ +D S
Sbjct: 126 -----------------------ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS--V 160
Query: 648 KLSDMGISKRL--QGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG-- 703
+++D G+S L GD++ T F VG
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKT----------------------F--------VGTP 190
Query: 704 YGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITG-----GKHPYGE---------- 746
W APE + Q R +A D++S G IT G PY +
Sbjct: 191 C----WMAPEVMEQVRGYDFKA-DIWSFG------ITAIELATGAAPYHKYPPMKVLMLT 239
Query: 747 ------SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800
S E + K + + L +P+ RP A +L H FF A
Sbjct: 240 LQNDPPSLETGVQDKEMLKKY-----GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
Query: 801 DTRLSFLRD 809
+ FL++
Sbjct: 295 KNK-EFLQE 302
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 70/357 (19%), Positives = 125/357 (35%), Gaps = 116/357 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLI---ASDQHPNIVRWYG 534
++I +G++GTV + G+ VA+++ + + I N I +++PNIV +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQ-MNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
D +++ +E SL D++ ++E +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV----------------TETCMDEGQIAA-------- 120
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
V R+ + L LH +IHRD+K N+L+ D S KL+D G
Sbjct: 121 -----------------VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFG 161
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ + S + +T +V G+ W APE
Sbjct: 162 FCAQITPEQS---KRST-----MV---------------------------GTPYWMAPE 186
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERDANIVKDRKDLFLV---- 764
+ + +D++SLG I G+ PY + L+L+
Sbjct: 187 VVTRKAYGPKVDIWSLG------IMAIEMIEGEPPYLN--------ENPLRALYLIATNG 232
Query: 765 --------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDR 813
+ D R L+ + + R A+ +L H F A LS L +
Sbjct: 233 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP-LSSLTPLIAA 288
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} Length = 369 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 3e-15
Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 34/187 (18%)
Query: 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFH 108
+ V+ LDG++H V + G I+W+ + + F D D LY
Sbjct: 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPA----FLPD-PNDGSLYTL 64
Query: 109 SKRFGK-MKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSA 167
+ + + KL + E ++ P S DG + +G + +++D+ +G
Sbjct: 65 GSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT------- 117
Query: 168 STPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227
S + P L+Y+ RT+Y + + E+ WN
Sbjct: 118 ----LSSAFADSLSPSTS-----------------LLYLGRTEYTITMYDTKTRELRWNA 156
Query: 228 AYADFKA 234
Y D+ A
Sbjct: 157 TYFDYAA 163
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 73/380 (19%), Positives = 136/380 (35%), Gaps = 137/380 (36%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ G+ G+V + + G VAVK+L + + +E++ L+ +H N++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGL 93
Query: 533 YGV----ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
V S ++F VYL LN+++ L + ++ L
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK----------------CQKLTDDHVQFL 137
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
++ Q+L+ GL ++H +IHRDLKP N+ +++D C
Sbjct: 138 ----------IY--------QILR-------GLKYIHSADIIHRDLKPSNLAVNED---C 169
Query: 647 A-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+++ +M+ GY
Sbjct: 170 ELKILDFGLARHTADEMT---------------------------------------GYV 190
Query: 706 SSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PY 744
++ W +APE +L + +D++S+GCI+ +TG G P
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 745 GESFERDANI----------VKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
E ++ ++ + + + P AVDL ++L + D R A L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 793 NHPFFWTADTRLSFLRDVSD 812
H +F + D D
Sbjct: 311 AHAYF-------AQYHDPDD 323
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 3e-15
Identities = 69/380 (18%), Positives = 133/380 (35%), Gaps = 125/380 (32%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWY 533
+ +G+ G V + G VA+K++ + L+EI+ ++ +H NI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-ILKHFKHENIITIF 75
Query: 534 GV------ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+ E+ + VY+ E L+ +I + +L++ I+
Sbjct: 76 NIQRPDSFENFNE-VYIIQELMQTDLHRVI----------------STQMLSDDHIQYF- 117
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
++ Q L+ + LH +IHRDLKP N+LI+ + C
Sbjct: 118 ---------IY--------QTLR-------AVKVLHGSNVIHRDLKPSNLLINSN---CD 150
Query: 648 -KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G+++ + + ++ + +
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQS-------------------------GMV-EFVA 184
Query: 707 SGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PYG 745
+ W +APE +L + +RA+D++S GCIL G+ P+
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 746 ESF------ERDANIV-----KDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
++ R + L P+ +DL R+L +P R A+ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 793 NHPFFWTADTRLSFLRDVSD 812
HP+ D +D
Sbjct: 305 EHPYL-------QTYHDPND 317
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 4e-15
Identities = 47/198 (23%), Positives = 74/198 (37%), Gaps = 51/198 (25%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I GL LH +++RDLKP+N+L+ D ++SD+G++ + +
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKG-------- 344
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
G TVGY APE + R T + D ++LGC+L+
Sbjct: 345 -------------RV------G----TVGY-----MAPEVVKNERYTFSPDWWALGCLLY 376
Query: 735 FCITGGKHP--YGESFERDANIVKDR---KDLFLVEHI-PEAVDLFTRLLDPNPDLR--- 785
I G + V+ E P+A L ++LL +P R
Sbjct: 377 EMIAG--QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGC 434
Query: 786 --PKAQNVLNHPFFWTAD 801
A+ V HP F +
Sbjct: 435 RGGSAREVKEHPLFKKLN 452
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 77/379 (20%), Positives = 132/379 (34%), Gaps = 131/379 (34%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV----ALKEIQNLIASDQHPNIVRWY 533
I +G+ G V + VA+K++ H L+EI+ ++ +H NI+
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK-ILLRFRHENIIGIN 91
Query: 534 GV------ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+ E +D VY+ + L L+ + L+ I
Sbjct: 92 DIIRAPTIEQMKD-VYIVQDLMETDLYKLLK----------------TQHLSNDHICYF- 133
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
L+ Q+L+ GL ++H ++HRDLKP N+L++ C
Sbjct: 134 ---------LY--------QILR-------GLKYIHSANVLHRDLKPSNLLLNTT---CD 166
Query: 648 -KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G+++ D F T Y +
Sbjct: 167 LKICDFGLARVADPDHDHTG--------------------------------FLT-EYVA 193
Query: 707 SGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------PYG 745
+ W +APE +L + T++ID++S+GCIL ++ GKH P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 746 ESFERDANI----------VKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793
E N+ K++ +A+DL ++L NP R + + L
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 794 HPFFWTADTRLSFLRDVSD 812
HP+ D SD
Sbjct: 314 HPYL-------EQYYDPSD 325
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 7e-15
Identities = 57/282 (20%), Positives = 99/282 (35%), Gaps = 70/282 (24%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+ F K + G+ G VV L + +VAVK L + H + E++ L
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
H NIV G + + E Y G +LLN +R +
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITE----------YCCYG-------------DLLNFLRRK 121
Query: 585 LLPVMENTKDIELWKANGHP--SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
+ + + + + LL + + G++ L IHRDL +N+L++
Sbjct: 122 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG 181
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
+ K+ D G+++ ++ D Y+V +L +
Sbjct: 182 R--ITKICDFGLARDIKNDS--------------NYVVKGNARLPVK------------- 212
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + T D++S G L+ + G PY
Sbjct: 213 ------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 8e-15
Identities = 75/344 (21%), Positives = 123/344 (35%), Gaps = 110/344 (31%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQ------NLIASDQHPNIVR 531
K + GS G V+L + G A+K L K V LK+I+ ++ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
D +Y+ +E YV G L + +E R
Sbjct: 106 LEFSFKDNSNLYMVME----------YVAGGEMFSHL----RRIGRFSEPHARFY----- 146
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+AQ IV +LH + LI+RDLKP+N+LI D+ +++D
Sbjct: 147 -------------AAQ-------IVLTFEYLHSLDLIYRDLKPENLLI--DQQGYIQVTD 184
Query: 652 MGISKRLQGDMS--CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
G +KR++G C T L
Sbjct: 185 FGFAKRVKGRTWTLCGTPE---------AL------------------------------ 205
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGES----FERDANIVKDRKDLFL 763
APE +L +A+D ++LG +++ G +P + + +E IV + +
Sbjct: 206 -APEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYE---KIVSGK--VRF 257
Query: 764 VEHI-PEAVDLFTRLLDPNPDLR-----PKAQNVLNHPFFWTAD 801
H + DL LL + R ++ NH +F T D
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 1e-14
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 475 VVFNKEIAKGSNGTVV---LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASDQHP 527
+ F I +G+ G V+ ++ + A+KR+ + E++ L HP
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NI+ G + ++YL++E Y G NLL+ +R +
Sbjct: 87 NIINLLGACEHRGYLYLAIE----------YAPHG-------------NLLDFLRKSRVL 123
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+ I A+ S QLL D+ G+ +L + IHRDL +N+L+ ++ A
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY--VA 181
Query: 648 KLSDMGISK 656
K++D G+S+
Sbjct: 182 KIADFGLSR 190
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 1e-14
Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-VAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVR 531
+ F +EI G G +V G + + VA+K + + ++E + ++ HP +V+
Sbjct: 10 LTFVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQ 67
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
YGV +Q + L E ++ G + L + Q
Sbjct: 68 LYGVCLEQAPICLVTE----------FMEHGCLSDYL--RTQRGLF-------------- 101
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+ LL + D+ G+++L E +IHRDL +N L+ ++ K+SD
Sbjct: 102 ------------AAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN--QVIKVSD 147
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ + D Y S K + W +
Sbjct: 148 FGMTRFVLDD---------------QYTSSTGTKFPV-------------------KWAS 173
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE R + D++S G +++ + GK PY
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 2e-14
Identities = 76/366 (20%), Positives = 129/366 (35%), Gaps = 133/366 (36%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ G+ G+V + G VA+K+L + A +E+ L+ QH N++
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGL 88
Query: 533 YGV-------ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
V + D YL + L ++ E +I+
Sbjct: 89 LDVFTPASSLRNFYD-FYLVMPFMQTDLQKIMG----------------LKFSEE-KIQY 130
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L ++ Q+LK GL ++H G++HRDLKP N+ +++D
Sbjct: 131 L----------VY--------QMLK-------GLKYIHSAGVVHRDLKPGNLAVNED--- 162
Query: 646 CA-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
C K+ D G+++ +M+ GY
Sbjct: 163 CELKILDFGLARHADAEMT---------------------------------------GY 183
Query: 705 GSSGW-QAPEQLLQGRQ-TRAIDLFSLGCILFFCITG-----GKH--------------P 743
+ W +APE +L + +D++S+GCI+ +TG GK P
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 243
Query: 744 YGESFERDANI----------VKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNV 791
E ++ + RKD P+A DL ++L+ + D R A
Sbjct: 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 303
Query: 792 LNHPFF 797
L HPFF
Sbjct: 304 LTHPFF 309
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 55/202 (27%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
IV L HLH++G+I+RD+K +N+L+ D + L+D G+SK D + + G
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILL--DSNGHVVLTDFGLSKEFVADETERAYDFCG--- 222
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCI 732
T+ Y AP+ + G +A+D +SLG +
Sbjct: 223 --------------------------TIEY-----MAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 733 LFFCITGGKHP--YGESFERDA-----NIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDL 784
++ +TG + + I+K + + + A DL RLL +P
Sbjct: 252 MYELLTG--ASPFTVDGEKNSQAEISRRILKS--EPPYPQEMSALAKDLIQRLLMKDPKK 307
Query: 785 R----PK-AQNVLNHPFFWTAD 801
R P+ A + H FF +
Sbjct: 308 RLGCGPRDADEIKEHLFFQKIN 329
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 4e-14
Identities = 64/277 (23%), Positives = 102/277 (36%), Gaps = 83/277 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS--VAVKRL--VKTHHDVA--LKEIQNLIASDQHPN 528
+V ++I +G+ G V G + VAVK A L+E + ++ HPN
Sbjct: 116 LVLGEQIGRGNFG-EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR-ILKQYSHPN 173
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
IVR GV + + +Y+ +E V G F L + + + L
Sbjct: 174 IVRLIGVCTQKQPIYIVME----------LVQGGDFLTFL--RTEGARL----------- 210
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
LL++ D +G+ +L IHRDL +N L+++ K
Sbjct: 211 ---------------RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN--VLK 253
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLV-ICECVFQFGVLFFTVGYGSS 707
+SD G+S+ VY S L+ V +
Sbjct: 254 ISDFGMSREEADG---------------VYAASGGLRQVPV------------------- 279
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L GR + D++S G +L+ + G PY
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 58/280 (20%), Positives = 95/280 (33%), Gaps = 61/280 (21%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+ F K + G+ G V+ + VAVK L + + E++ +
Sbjct: 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 106
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
H NIV G + +YL E Y G L +K + +
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFE----------YCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+ E L LL + G+ L +HRDL +NVL++ K
Sbjct: 157 QKRLEEEEDLNVL------TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK- 209
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K+ D G+++ + D Y+V +L +
Sbjct: 210 -VVKICDFGLARDIMSDS--------------NYVVRGNARLPVK--------------- 239
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L +G T D++S G +L+ + G +PY
Sbjct: 240 ----WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 56/282 (19%), Positives = 101/282 (35%), Gaps = 50/282 (17%)
Query: 391 QVKSKKQNEEHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGN 450
+++ + K+ RR + T ++E ++ N V T LS
Sbjct: 4 SHHHHHHSQDPPAVHKLTKRIPLRR----QVTVSAESSSSMNSNTPLVRITTRLSSTADT 59
Query: 451 GEKFLLTFTDLIDDR---VDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRS-------- 499
++ +L +D ++ K + +G G VV G
Sbjct: 60 PMLAGVSEYELPEDPKWEFPRDKL----TLGKPLGEGCFGQVV-MAEAVGIDKDKPKEAV 114
Query: 500 -VAVKRLVKTHHDVA----LKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLN 554
VAVK L + + E++ + +H NI+ G + +Y+ +E
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE------- 167
Query: 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614
Y G NL +R R P ME + DI L+ T
Sbjct: 168 ---YASKG-------------NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 211
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
+ G+ +L IHRDL +NVL++++ K++D G+++
Sbjct: 212 LARGMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLAR 251
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 5e-14
Identities = 59/274 (21%), Positives = 102/274 (37%), Gaps = 79/274 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS--VAVKRLVKTHHDVA--LKEIQNLIASDQHPNIV 530
+ ++ G G V EG ++ S VAVK L + +V LKE ++ +HPN+V
Sbjct: 15 ITMKHKLGGGQYG-EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLV 72
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ GV + + Y+ E ++ G+ + L +E + +
Sbjct: 73 QLLGVCTREPPFYIITE----------FMTYGNLLDYL--RECNRQEV------------ 108
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ LL + I S + +L + IHRDL +N L+ ++ K++
Sbjct: 109 -------------SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN--HLVKVA 153
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+S+ + GD Y K I W
Sbjct: 154 DFGLSRLMTGD---------------TYTAHAGAKFPI-------------------KWT 179
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
APE L + + D+++ G +L+ T G PY
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 7e-14
Identities = 34/194 (17%), Positives = 61/194 (31%), Gaps = 50/194 (25%)
Query: 479 KEIAKGSNGT-VVLEGNYE--GRSVAVKRL-----VKTHHDVALKEIQNLIASDQHPNIV 530
I KG V Y+ G V V+R+ E+ + HPNIV
Sbjct: 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-HPNIV 89
Query: 531 RWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ + +++ S DLI + +NE+ I
Sbjct: 90 PYRATFIADNELWVVTSFMAYGSAKDLI-------------CTHFMDGMNELAIAY---- 132
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+ + ++ L ++H +G +HR +K ++LIS D L
Sbjct: 133 ---------------------ILQGVLKALDYIHHMGYVHRSVKASHILISVDGK--VYL 169
Query: 650 SDMGISKRLQGDMS 663
S + + +
Sbjct: 170 SGLRSNLSMISHGQ 183
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 7e-14
Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 47/190 (24%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRL-VKTHHDVAL--KEIQNLIASDQHPNIVRWYG 534
E+ G+ G V N E G A K + K+ ++ EI+ L D HP IV+ G
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-HPYIVKLLG 83
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+++ +E C +++ ++ L E
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------------------------- 117
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+ V R ++ L+ LH +IHRDLK NVL++ + +L+D G
Sbjct: 118 -------------QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD--IRLADFG 162
Query: 654 ISKRLQGDMS 663
+S + +
Sbjct: 163 VSAKNLKTLQ 172
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 8e-14
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 39/195 (20%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS---------VAVKRLVKTHHDVA----LKEIQNLI 521
+ K + +G+ G VV G VAVK L + + E++ +
Sbjct: 37 LTLGKPLGEGAFGQVV-MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+H NI+ G + +Y+ +E Y G NL +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVE----------YASKG-------------NLREYL 132
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
R R P ME + DI L+ T + G+ +L IHRDL +NVL+++
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
Query: 642 DKSFCAKLSDMGISK 656
+ K++D G+++
Sbjct: 193 NNV--MKIADFGLAR 205
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 9e-14
Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 36/193 (18%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+ K + +G+ G V+ ++ R+VAVK L + + E++ LI
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 525 QHPNIVRWYGVESDQDF-VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
H N+V G + + + +E + G NL +R
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVE----------FCKFG-------------NLSTYLRS 125
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+ + E + L+ + + G+ L IHRDL +N+L+S+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 644 SFCAKLSDMGISK 656
K+ D G+++
Sbjct: 186 --VVKICDFGLAR 196
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVK--THHDVALKEIQNLIASDQHPNIVR 531
+ F KE+ G G VV G + G VA+K + + D ++E + ++ + H +V+
Sbjct: 26 LTFLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQ 83
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
YGV + Q +++ E Y+ +G L +E
Sbjct: 84 LYGVCTKQRPIFIITE----------YMANGCLLNYL--REMRHRF-------------- 117
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+ QLL++ +D+ + +L +HRDL +N L++ K+SD
Sbjct: 118 ------------QTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ--GVVKVSD 163
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+S+ + D Y S+ K + W
Sbjct: 164 FGLSRYVLDD---------------EYTSSVGSKFPV-------------------RWSP 189
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE L+ + + D+++ G +++ + GK PY
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 1e-13
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 58/200 (29%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR-LQGDMSCLTQNATGMD 673
I L HLH+ G+I+RDLKP+N+++ + KL+D G+ K + T
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIML--NHQGHVKLTDFGLCKESIHDGTVTHT------- 180
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G T+ Y APE L++ RA+D +SLG ++
Sbjct: 181 --------------FC------G----TIEY-----MAPEILMRSGHNRAVDWWSLGALM 211
Query: 734 FFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLR- 785
+ +TG P GE+ + I+K L L ++ EA DL +LL N R
Sbjct: 212 YDMLTG--APPFTGENRKKTID---KILKC--KLNLPPYLTQEARDLLKKLLKRNAASRL 264
Query: 786 ---PK-AQNVLNHPFFWTAD 801
P A V HPFF +
Sbjct: 265 GAGPGDAGEVQAHPFFRHIN 284
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 63/366 (17%), Positives = 107/366 (29%), Gaps = 131/366 (35%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV-- 535
+++ +G V N V VK L +EI+ L PNI+ +
Sbjct: 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK 101
Query: 536 -ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ + L L+ ++R +
Sbjct: 102 DPVSRTPALVFEHVNNTDFKQLYQTLT----------------DYDIRFYMY-------- 137
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA-KLSDMG 653
++LK L + H +G++HRD+KP NV+I D +L D G
Sbjct: 138 ------------EILK-------ALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWG 176
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ V + S +F + PE
Sbjct: 177 LA-EFYHPGQEYN----------VRVAS----------------RYF---------KGPE 200
Query: 714 QLLQGRQ-TRAIDLFSLGCIL---------FFCITGGKH--------------PYGESFE 749
L+ + ++D++SLGC+L FF G +
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH---GHDNYDQLVRIAKVLGTEDLYDYI 257
Query: 750 RDANIVKDR--------------KDLFLVEHI----PEAVDLFTRLLDPNPDLRPKAQNV 791
NI D + E+ PEA+D +LL + R A+
Sbjct: 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 792 LNHPFF 797
+ HP+F
Sbjct: 318 MEHPYF 323
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 49/208 (23%), Positives = 72/208 (34%), Gaps = 50/208 (24%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
+V L +H +G IHRD+KP N+L+ DKS KL+D G ++ + A G
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVG--- 231
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL----QGRQTRAIDLFSLG 730
T Y +PE L G R D +S+G
Sbjct: 232 --------------------------TPDY-----ISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 731 CILFFCITGGKHP--YGES-FERDANIVKDRKDLFLVEHI---PEAVDLFTRLL-DPNPD 783
L+ + G Y +S + I+ + L + EA +L L D
Sbjct: 261 VFLYEMLVG--DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVR 318
Query: 784 LRPK-AQNVLNHPFFWTADTRLSFLRDV 810
L + + H FF LRD
Sbjct: 319 LGRNGVEEIKRHLFFKNDQWAWETLRDT 346
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 2e-13
Identities = 67/346 (19%), Positives = 122/346 (35%), Gaps = 110/346 (31%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQ------NLIASDQHPNI 529
+ + GS G V L + GR A+K L K V LK+++ +++ HP I
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK-EIVVRLKQVEHTNDERLMLSIVTHPFI 68
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+R +G D +++ ++ Y+ G L + S +
Sbjct: 69 IRMWGTFQDAQQIFMIMD----------YIEGGELFSLL----RKSQRFPNPVAKFY--- 111
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+A+ + L +LH +I+RDLKP+N+L+ DK+ K+
Sbjct: 112 ---------------AAE-------VCLALEYLHSKDIIYRDLKPENILL--DKNGHIKI 147
Query: 650 SDMGISKRLQGDMS--CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
+D G +K + C T + Y+
Sbjct: 148 TDFGFAKYVPDVTYTLCGTPD---------YI---------------------------- 170
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHP--YGES----FERDANIVKDRKDL 761
APE + ++ID +S G +++ + G + Y + +E I+ L
Sbjct: 171 ---APEVVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYE---KILNAE--L 220
Query: 762 FLVEHI-PEAVDLFTRLLDPNPDLR-----PKAQNVLNHPFFWTAD 801
+ DL +RL+ + R ++V NHP+F
Sbjct: 221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVK--THHDVALKEIQNLIASDQHPNIVR 531
+ KE+ G G VV G ++G+ VAVK + + D +E Q + HP +V+
Sbjct: 10 ITLLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQ-TMMKLSHPKLVK 67
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+YGV S + +Y+ E Y+ +G L + +
Sbjct: 68 FYGVCSKEYPIYIVTE----------YISNGCLLNYLRSHGKGLEP-------------- 103
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+QLL++ D+ G++ L IHRDL +N L+ +D C K+SD
Sbjct: 104 --------------SQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD--LCVKVSD 147
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ + D Y+ S+ K + W A
Sbjct: 148 FGMTRYVLDD---------------QYVSSVGTKFPV-------------------KWSA 173
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE + + D+++ G +++ + GK PY
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 54/273 (19%), Positives = 97/273 (35%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVR 531
+ K++ G G V Y VAVK + V L E + + QH +V+
Sbjct: 190 LKLEKKLGAGQFG-EVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVM-KTLQHDKLVK 247
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ V + ++ +Y+ E ++ GS + L K + +
Sbjct: 248 LHAVVT-KEPIYIITE----------FMAKGSLLDFL--KSDEGSKQ------------- 281
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
P +L+ + I G++ + + IHRDL+ N+L+S K++D
Sbjct: 282 ------------PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCKIAD 327
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ ++ + Y K I W A
Sbjct: 328 FGLARVIEDN---------------EYTAREGAKFPI-------------------KWTA 353
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE + G T D++S G +L +T G+ PY
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 3e-13
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 58/200 (29%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK-RLQGDMSCLTQNATGMD 673
+ L HLH +G+I+RDLKP+N+L+ D+ KL+D G+SK + + +
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYS------- 185
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G TV Y APE + + T++ D +S G ++
Sbjct: 186 --------------FC------G----TVEY-----MAPEVVNRRGHTQSADWWSFGVLM 216
Query: 734 FFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLR- 785
F +TG G+ I+K L + + + PEA L L NP R
Sbjct: 217 FEMLTG--TLPFQGKDRKETMT---MILKA--KLGMPQFLSPEAQSLLRMLFKRNPANRL 269
Query: 786 ---PK-AQNVLNHPFFWTAD 801
P + + H FF T D
Sbjct: 270 GAGPDGVEEIKRHSFFSTID 289
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-13
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 64/208 (30%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQNA 669
I L++LHE G+I+RDLK NVL+ + KL+D G+ K GD + C T N
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSE-GHI-KLTDYGMCKEGLRPGDTTSTFCGTPN- 175
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
Y+ APE L ++D ++L
Sbjct: 176 --------YI-------------------------------APEILRGEDYGFSVDWWAL 196
Query: 730 GCILFFCITGGKHPYGESFERDANIVKDRKDLF---LVEHI-------PEAVDLFTRLLD 779
G ++F + G+ P+ D LF L + I +A + L+
Sbjct: 197 GVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLN 255
Query: 780 PNPDLR----PK--AQNVLNHPFFWTAD 801
+P R P+ ++ HPFF D
Sbjct: 256 KDPKERLGCHPQTGFADIQGHPFFRNVD 283
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 4e-13
Identities = 49/204 (24%), Positives = 73/204 (35%), Gaps = 56/204 (27%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
IV + +H +G +HRD+KP N+L+ D+ +L+D G +L+ D + + A G
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILL--DRCGHIRLADFGSCLKLRADGTVRSLVAVG--- 225
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-------QGRQTRAIDLF 727
T Y +PE L G D +
Sbjct: 226 --------------------------TPDY-----LSPEILQAVGGGPGTGSYGPECDWW 254
Query: 728 SLGCILFFCITGGKHP--YGESFERD-ANIVKDRKDLFLVEHI----PEAVDLFTRLLDP 780
+LG + G Y +S IV ++ L L EA D RLL
Sbjct: 255 ALGVFAYEMFYG--QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC- 311
Query: 781 NPDLR---PKAQNVLNHPFFWTAD 801
P+ R A + HPFF+ D
Sbjct: 312 PPETRLGRGGAGDFRTHPFFFGLD 335
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 4e-13
Identities = 66/395 (16%), Positives = 124/395 (31%), Gaps = 93/395 (23%)
Query: 358 HAFVEGFRSYIQSFIVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKTGIPKKKKSRRPG 417
VE + I CP + + H + P+++
Sbjct: 233 WQLVEYLKLKADGLIYCLKEACPNSS---ASNASGAAAPTLPAHPSTLTHPQRRIDTLNS 289
Query: 418 YNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVF 477
+ T ++ + +T + E+ L D L++
Sbjct: 290 -DGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRD--------NLLIA 340
Query: 478 NKEIAKGSNGTVVLEGNYEGRS----VAVKRLVKTHHDVALKEIQ---NLIASDQHPNIV 530
+ E+ G+ G+V +G Y R VA+K L + +E+ ++ +P IV
Sbjct: 341 DIELGCGNFGSV-RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R GV + + L +E G + L + +
Sbjct: 400 RLIGVCQAEA-LMLVME----------MAGGGPLHKFL--VGKREEI------------- 433
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
P + + ++ + G+ +L E +HR+L +NVL+ AK+S
Sbjct: 434 -------------PVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH--YAKIS 478
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+SK L D Y K + W
Sbjct: 479 DFGLSKALGAD-------------DSYYTARSAGKWPL-------------------KWY 506
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG 745
APE + + + D++S G ++ ++ G+ PY
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 4e-13
Identities = 63/283 (22%), Positives = 105/283 (37%), Gaps = 91/283 (32%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR---------SVAVKRLVKTHHDVA----LKEIQNLI 521
+ +K + G G V GR SVA+K L + + L E ++
Sbjct: 47 ISIDKVVGAGEFGEV-----CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS-IM 100
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
HPNI+R GV + V + E Y+ +GS + L ++ D+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE----------YMENGSLDSFL--RKHDAQF---- 144
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
QL+ + R I SG+ +L ++G +HRDL +N+LI+
Sbjct: 145 ----------------------TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
+ K+SD G+ R+ D G K+ I
Sbjct: 183 N--LVCKVSDFGLG-RVLEDDPEAAYTTRGG------------KIPI------------- 214
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W +PE + + T A D++S G +L+ ++ G+ PY
Sbjct: 215 ------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 4e-13
Identities = 43/197 (21%), Positives = 72/197 (36%), Gaps = 52/197 (26%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
+V + +H++ +HRD+KP N+L+ D + +L+D G +L D + + A G
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILM--DMNGHIRLADFGSCLKLMEDGTVQSSVAVG--- 238
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL-----QGRQTRAIDLFSL 729
T Y +PE L +GR D +SL
Sbjct: 239 --------------------------TPDY-----ISPEILQAMEGGKGRYGPECDWWSL 267
Query: 730 GCILFFCITGGKHP--YGESFERD-ANIVKDRKDLFLVEHI----PEAVDLFTRLLDPNP 782
G ++ + G Y ES I+ ++ + A DL RL+
Sbjct: 268 GVCMYEMLYG--ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSRE 325
Query: 783 D-L-RPKAQNVLNHPFF 797
L + ++ HPFF
Sbjct: 326 HRLGQNGIEDFKKHPFF 342
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 5e-13
Identities = 62/301 (20%), Positives = 108/301 (35%), Gaps = 83/301 (27%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVA---LKEIQNLIASDQH 526
+ + ++ KG+ G+V L G+ G VAVK+L + D +EIQ ++ +
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQ-ILKALHS 83
Query: 527 PNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
IV++ GV + + L +E Y+ SG + L + + L
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVME----------YLPSGCLRDFL--QRHRARL------- 124
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+++LL + I G+ +L +HRDL +N+L+ +
Sbjct: 125 -------------------DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE-- 163
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K++D G++K L D Y+V + I
Sbjct: 164 AHVKIADFGLAKLLPLDKDY-------------YVVREPGQSPIF--------------- 195
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
W APE L +R D++S G +L+ T S E + +R L
Sbjct: 196 ----WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251
Query: 765 E 765
Sbjct: 252 R 252
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 5e-13
Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 39/195 (20%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS---------VAVKRLVKTHHDVA----LKEIQNLI 521
+V K + +G+ G VV G VAVK L + + E++ +
Sbjct: 71 LVLGKPLGEGAFGQVV-LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
+H NI+ G + +Y+ +E Y G NL +
Sbjct: 130 MIGKHKNIINLLGACTQDGPLYVIVE----------YASKG-------------NLREYL 166
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK 641
+ R P +E + + S L+ + G+ +L IHRDL +NVL+++
Sbjct: 167 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226
Query: 642 DKSFCAKLSDMGISK 656
D K++D G+++
Sbjct: 227 DN--VMKIADFGLAR 239
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 6e-13
Identities = 62/272 (22%), Positives = 103/272 (37%), Gaps = 81/272 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-LKEIQNLIASDQHPNIVRWY 533
+ + I KG G V+ G+Y G VAVK + A L E + +H N+V+
Sbjct: 195 LKLLQTIGKGEFG-DVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM-TQLRHSNLVQLL 252
Query: 534 GVES-DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
GV ++ +Y+ E Y+ GS + L + + ++L
Sbjct: 253 GVIVEEKGGLYIVTE----------YMAKGSLVDYL--RSRGRSVL-------------- 286
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
LLK + D+ + +L +HRDL +NVL+S+D AK+SD
Sbjct: 287 -----------GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDF 333
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++K + S KL + W AP
Sbjct: 334 GLTK----EASSTQDTG---------------KLPVK-------------------WTAP 355
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
E L + + + D++S G +L+ + G+ PY
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 6e-13
Identities = 49/208 (23%), Positives = 75/208 (36%), Gaps = 64/208 (30%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQNA 669
I L++LHE G+I+RDLK NVL+ + KL+D G+ K GD + C T N
Sbjct: 162 ISLALNYLHERGIIYRDLKLDNVLLDSE-GHI-KLTDYGMCKEGLRPGDTTSTFCGTPN- 218
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
Y+ APE L ++D ++L
Sbjct: 219 --------YI-------------------------------APEILRGEDYGFSVDWWAL 239
Query: 730 GCILFFCITGGKHPYGESFERDANIVKDRKDLF---LVEHI-------PEAVDLFTRLLD 779
G ++F + G+ P+ D LF L + I +A + L+
Sbjct: 240 GVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLN 298
Query: 780 PNPDLR------PKAQNVLNHPFFWTAD 801
+P R ++ HPFF D
Sbjct: 299 KDPKERLGCHPQTGFADIQGHPFFRNVD 326
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 6e-13
Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 66/204 (32%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMS-----CLTQNA 669
IVS L +LH +++RD+K +N+++ KD K++D G+ K D + C T
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-GHI-KITDFGLCKEGISDGATMKTFCGTPE- 170
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
YL APE L RA+D + L
Sbjct: 171 --------YL-------------------------------APEVLEDNDYGRAVDWWGL 191
Query: 730 GCILFFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNP 782
G +++ + G Y + FE I+ + ++ + PEA L LL +P
Sbjct: 192 GVVMYEMMCG--RLPFYNQDHERLFE---LILME--EIRFPRTLSPEAKSLLAGLLKKDP 244
Query: 783 DLR----PK-AQNVLNHPFFWTAD 801
R P A+ V+ H FF + +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFLSIN 268
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 6e-13
Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 67/269 (24%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
I GS G V + R VA+K++++ D+ L+EI ++ H ++V+
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIA-ILNRLNHDHVVKV 117
Query: 533 YGV---ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+ + + F +Y+ LE L L E+ I+ L
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRT---------------PVYLTELHIKTL- 161
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
L+ LL G+ ++H G++HRDLKP N L+++D C+
Sbjct: 162 ---------LY--------NLLV-------GVKYVHSAGILHRDLKPANCLVNQD---CS 194
Query: 648 -KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G+++ + + +Q + LV+ + T G+
Sbjct: 195 VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT--------KNLKRQLT-GHVV 245
Query: 707 SGW-QAPEQLLQGRQ-TRAIDLFSLGCIL 733
+ W +APE +L T AID++S+GCI
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIF 274
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 7e-13
Identities = 56/283 (19%), Positives = 98/283 (34%), Gaps = 85/283 (30%)
Query: 473 KLVVFNKEIAKGSNGTVVLEGNYEGRS----VAVKRL-----VKTHHDVALKEIQNLIAS 523
L + +KE+ G+ G V +G Y+ + VAVK L D L E ++
Sbjct: 17 LLTLEDKELGSGNFG-TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQ 74
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
+P IVR G+ + + L +E G L ++
Sbjct: 75 LDNPYIVRMIGI-CEAESWMLVME----------MAELGP-------------LNKYLQ- 109
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+ ++++ + G+ +L E +HRDL +NVL+
Sbjct: 110 ---------------QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH 154
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
AK+SD G+SK L+ D + G K +
Sbjct: 155 --YAKISDFGLSKALRADENYYKAQTHG-------------KWPV--------------- 184
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746
W APE + + + D++S G +++ + G+ PY
Sbjct: 185 ----KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 7e-13
Identities = 75/539 (13%), Positives = 161/539 (29%), Gaps = 163/539 (30%)
Query: 425 SEKMQNIIPNESKVGETDGLSHITGNG---EKFLLTFTDLIDDRVDG--RRIGKLVVFN- 478
+ ++I+ E E D HI + L F L+ + + + + +++ N
Sbjct: 39 QDMPKSILSKE----EID---HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91
Query: 479 ----KEIAKGSNGTVVLEGNYE--------GRSVAVKRLVKTHHDVALKEIQNLIASDQ- 525
I ++ Y V K V +++ + +
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY--LKLRQALLELRP 149
Query: 526 HPNIV-----------------RWYGVESDQDF-VY-LSLERCTCS------LNDLIYVL 560
N++ Y V+ DF ++ L+L+ C L L+Y +
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209
Query: 561 SGSFEEQLNAKEQDSNLLNEVRIRL------------LPVMENTKDIELWKA-NGHPSAQ 607
++ + + ++ ++ L L V+ N ++ + W A N +
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CK 267
Query: 608 LLKVTRD--IVSGLSHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMS 663
+L TR + LS H L ++ ++ D+ K D
Sbjct: 268 ILLTTRFKQVTDFLSAATT---THISLDHHSMTLTPDEVKSLLLKYLDC--------RPQ 316
Query: 664 CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRA 723
L + + + + +++ ++ + W + + + T
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLAT------------------WDNWKHVNCDKLTTI 358
Query: 724 IDLFSLGCILFFCITGGKHPYGESFERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNP 782
I+ SL + + + L + P + + T LL
Sbjct: 359 IES-SLNVL------------------EPAEYRKMFDRLSV---FPPSAHIPTILL---- 392
Query: 783 DLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWD 842
W D ++ + +KL + +LV K
Sbjct: 393 ------------SLIW------------FDVIKSDVMVVVNKLHKY----SLVE---KQP 421
Query: 843 EKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEG-FYNYF 900
K T I +I + K +N L R I + N + D +L+ + + FY++
Sbjct: 422 -KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD--DLIPPYLDQYFYSHI 477
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 9e-11
Identities = 74/523 (14%), Positives = 139/523 (26%), Gaps = 202/523 (38%)
Query: 515 KEIQNLIASDQHPNIVR---W----YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQ 567
+EI ++I S + W E Q FV L + +++S + +
Sbjct: 49 EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI------NYKFLMS-PIKTE 101
Query: 568 LNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-- 625
+ + E R RL N + V+R L ++
Sbjct: 102 QRQPSMMTRMYIEQRDRLY--------------NDNQVFAKYNVSR-----LQPYLKLRQ 142
Query: 626 GLIHRDLKPQNVLISKDKSFCAKLSDM-GISKRLQGDMSCLTQNATGMDLQLVYLVSILL 684
L +L+P ++ + + G K + + + + L
Sbjct: 143 AL--LELRPAKNVL---------IDGVLGSGK------TWVA-------------LDVCL 172
Query: 685 KLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQT----------------------- 721
+ +C F + + + +S PE +L+ Q
Sbjct: 173 SYKV-QCKMDFKIFWLNLKNCNS----PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 722 -----------------------------RAIDLFSLGC-ILFFCITGGKHPYGESFERD 751
+A + F+L C IL T R
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL--TT-----------RF 274
Query: 752 ANIV-----KDRKDLFLVEHI-----PEAVDLFTRLLDPNP-DLRPKAQNVLNHPFFWTA 800
+ + L H E L + LD P DL + +P
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT--NPR---- 328
Query: 801 DTRLS----FLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETK-------- 848
RLS +RD + + KL +E +L L E E +
Sbjct: 329 --RLSIIAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVL-----EPAEYRKMFDRLSV 380
Query: 849 FIENI----GRYRRY----KYDNVRDLLRVIRNKS-------NHFRELPQDIQELLGSHP 893
F + +V ++ + S +P I L
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP-SIYLELKVKL 439
Query: 894 EGFYNYFSCRFPKLLIEVYNVIFTYCKGEEV-------FHKYV 929
E Y + +++ YN+ T+ + + F+ ++
Sbjct: 440 ENEY-----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 1e-08
Identities = 79/637 (12%), Positives = 185/637 (29%), Gaps = 171/637 (26%)
Query: 231 DFKAEFRCQEVGKSFSGYHFNSGSELGMDLIGDVE-SHLPCHTQMTASVYRL-------R 282
F F C++V ++ ++ E H+ + RL +
Sbjct: 28 AFVDNFDCKDV------------QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75
Query: 283 DNSLPEFL-SVIGKVAGWI-----------SLPGSSQNSLLGPVDRNSPLFLPDKVDRPP 330
+ + +F+ V+ ++ S+ + ++ +F V R
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135
Query: 331 L------ALPSTETEIPWTL--GMPG-G-SV--SEINKKHAFVEGFRSYIQSFIVLFIAL 378
AL L G+ G G + ++ + F + ++ L
Sbjct: 136 PYLKLRQALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKM-----DFKIFWLNL 189
Query: 379 ----CP--IIGFL--FYHSKQVKSKKQNEEHITKTGIP----KKKKSR---RPGYNR--- 420
P ++ L + + + +H + + + + R Y
Sbjct: 190 KNCNSPETVLEMLQKLLY-QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 421 ---NTTNSEKMQ--NIIPNESKVGETDGLSHITGNGEKFLLTFTDL-IDDRVDGRRIGKL 474
N N++ N+ K+ LLT + D + +
Sbjct: 249 VLLNVQNAKAWNAFNL---SCKI----------------LLTTRFKQVTDFLSAATTTHI 289
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVA-VKRLVKTHHDVALKEIQNLIASDQHPNIVRWY 533
+ + + + L Y + R V T + L ++IA + W
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL----SIIAESIRDGLATW- 344
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
++ +++ ++ L +I S L E + + + + P +
Sbjct: 345 -----DNWKHVNCDK----LTTII----ESSLNVLEPAEY-RKMFDRLSV--FP--PSAH 386
Query: 594 DIE------LWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
I +W + D++ ++ LH+ L+ + K
Sbjct: 387 -IPTILLSLIWFD---------VIKSDVMVVVNKLHKYSLVEKQPKES------------ 424
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLV--YLVSILLKLVICECVFQFGVLFFTVGYG 705
+S + ++ +N + +V Y + + + +G+
Sbjct: 425 TISIPS----IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH- 479
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILF--FCITGGK--HPYGESFERDANIVKDRKDL 761
L + LF + +F F K H ++ +I+ + L
Sbjct: 480 --------HLKNIEHPERMTLFRM---VFLDFRFLEQKIRHD-STAWNASGSILNTLQQL 527
Query: 762 -FLVEHIPEAVDLFTRLLDPNPDLRPK-AQNVLNHPF 796
F +I + + RL++ D PK +N++ +
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 7e-13
Identities = 78/390 (20%), Positives = 133/390 (34%), Gaps = 146/390 (37%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
K I G+ G V + R+VA+K+L + + A +E+ L+ H NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 89
Query: 533 YGV----ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
V +S ++F VY+ +E +L +I + + L+ R+ L
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDANLCQVI--------------QME---LDHERMSYL 132
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
L+ Q+L G+ HLH G+IHRDLKP N+++ D C
Sbjct: 133 ----------LY--------QMLC-------GIKHLHSAGIIHRDLKPSNIVVKSD---C 164
Query: 647 A-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G++ R G +T Y
Sbjct: 165 TLKILDFGLA-RTAGTSFMMT------------------------------------PYV 187
Query: 706 SSGW-QAPEQLLQGRQTRAIDLFSLGCILFFCITG-----GKHPY--------------- 744
+ + +APE +L +D++S+GCI+ I G G
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 745 ---------------------GESFERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782
G SFE+ +++ +A DL +++L +
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 783 DLRPKAQNVLNHPFFWTADTRLSFLRDVSD 812
R L HP+ ++ D S+
Sbjct: 308 SKRISVDEALQHPY-------INVWYDPSE 330
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 8e-13
Identities = 62/272 (22%), Positives = 104/272 (38%), Gaps = 81/272 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA-LKEIQNLIASDQHPNIVRWY 533
+ + I KG G V+ G+Y G VAVK + A L E ++ +H N+V+
Sbjct: 23 LKLLQTIGKGEFG-DVMLGDYRGNKVAVKCIKNDATAQAFLAEAS-VMTQLRHSNLVQLL 80
Query: 534 GVESDQD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
GV ++ +Y+ E Y+ GS + L + + ++L
Sbjct: 81 GVIVEEKGGLYIVTE----------YMAKGSLVDYL--RSRGRSVL-------------- 114
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
LLK + D+ + +L +HRDL +NVL+S+D AK+SD
Sbjct: 115 -----------GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDF 161
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++K + S KL + W AP
Sbjct: 162 GLTK----EASSTQDTG---------------KLPVK-------------------WTAP 183
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
E L + + + D++S G +L+ + G+ PY
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 1e-12
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 72/269 (26%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
I +GS G V L + ++VA+K++ + D+ L+EI ++ + I+R
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT-ILNRLKSDYIIRL 90
Query: 533 YGV---ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
Y + + F +Y+ LE L L L E I+ +
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKT---------------PIFLTEEHIKTI- 134
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
L+ LL G + +HE G+IHRDLKP N L+++D C+
Sbjct: 135 ---------LY--------NLLL-------GENFIHESGIIHRDLKPANCLLNQD---CS 167
Query: 648 -KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G+++ + + N + + L K T +
Sbjct: 168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK-------------QLT-SHVV 213
Query: 707 SGW-QAPEQLLQGRQ-TRAIDLFSLGCIL 733
+ W +APE +L T++ID++S GCI
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIF 242
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 60/282 (21%), Positives = 96/282 (34%), Gaps = 74/282 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEG-------RSVAVKRLVKTHHDVA----LKEIQNLIAS 523
+ F K + G+ G VV E G VAVK L T H + E++ +
Sbjct: 48 LQFGKTLGAGAFGKVV-EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
QH NIV G + V + E C L + + S E +S
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA----- 161
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
+ LL + + G++ L IHRD+ +NVL++
Sbjct: 162 ---------------------STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
AK+ D G+++ + D Y+V +L +
Sbjct: 201 H--VAKIGDFGLARDIMNDS--------------NYIVKGNARLPVK------------- 231
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + T D++S G +L+ + G +PY
Sbjct: 232 ------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+V K + +G G VV L+G +VAVK L + L E N++
Sbjct: 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQV 83
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQL-NAKEQDSNLLNEVRI 583
HP++++ YG S + L +E Y GS L +++ L
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVE----------YAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
R +++ + L L+ I G+ +L E+ L+HRDL +N+L+++ +
Sbjct: 134 RNSSSLDHPDERAL------TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 644 SFCAKLSDMGISK 656
K+SD G+S+
Sbjct: 188 --KMKISDFGLSR 198
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 57/287 (19%), Positives = 95/287 (33%), Gaps = 88/287 (30%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVA-----LKEIQNLIASD 524
+ +++ +G G V L + G VAVK L K +EI ++ +
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEID-ILRTL 90
Query: 525 QHPNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
H +I+++ G ++ + L +E YV GS + L
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVME----------YVPLGSLRDYL-------------- 126
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
+ AQLL + I G+++LH IHRDL +NVL+ D
Sbjct: 127 ----------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND 170
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
K+ D G++K + Y V +
Sbjct: 171 --RLVKIGDFGLAKAVPEG-------------HEYYRVREDGDSPVF------------- 202
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE 749
W APE L + + A D++S G L+ +T +
Sbjct: 203 ------WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 243
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 70/319 (21%), Positives = 123/319 (38%), Gaps = 85/319 (26%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVA---LKEIQNLIASDQH 526
+ F +++ KG+ G+V + + G VAVK+L + + +EI+ ++ S QH
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE-ILKSLQH 70
Query: 527 PNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
NIV++ GV + + + L +E Y+ GS + L ++ +
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIME----------YLPYGSLRDYL--QKHKERI------- 111
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+LL+ T I G+ +L IHRDL +N+L+ +
Sbjct: 112 -------------------DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE-- 150
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K+ D G++K L D + + V + I
Sbjct: 151 NRVKIGDFGLTKVLPQD-------------KEFFKVKEPGESPIF--------------- 182
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
W APE L + + + A D++S G +L+ T + E I D++ +V
Sbjct: 183 ----WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 765 EHIPEAVDLFTRLLDPNPD 783
H+ E + RL P PD
Sbjct: 239 FHLIELLKNNGRL--PRPD 255
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 54/281 (19%), Positives = 98/281 (34%), Gaps = 81/281 (28%)
Query: 473 KLVVFNKEIAKGSNGTV---VLEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASDQ 525
L++ + E+ G+ G+V V + VA+K L + ++E Q ++
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLD 68
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
+P IVR GV + + L +E G + L + +
Sbjct: 69 NPYIVRLIGV-CQAEALMLVME----------MAGGGPLHKFL--VGKREEI-------- 107
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
P + + ++ + G+ +L E +HRDL +NVL+
Sbjct: 108 ------------------PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-- 147
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
AK+SD G+SK L D Y K +
Sbjct: 148 YAKISDFGLSKALGAD-------------DSYYTARSAGKWPL----------------- 177
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE 746
W APE + + + D++S G ++ ++ G+ PY +
Sbjct: 178 --KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 63/284 (22%), Positives = 105/284 (36%), Gaps = 92/284 (32%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR----------SVAVKRLVKTHHDVA----LKEIQNL 520
V K I G G V Y+G VA+K L + + L E +
Sbjct: 46 VTRQKVIGAGEFGEV-----YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG-I 99
Query: 521 IASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
+ H NI+R GV S + + E Y+ +G+ ++ L +E+D
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITE----------YMENGALDKFL--REKDGEF--- 144
Query: 581 VRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS 640
QL+ + R I +G+ +L + +HRDL +N+L++
Sbjct: 145 -----------------------SVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN 181
Query: 641 KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700
+ K+SD G+S R+ D T +G K+ I
Sbjct: 182 SN--LVCKVSDFGLS-RVLEDDPEATYTTSGG------------KIPI------------ 214
Query: 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + + T A D++S G +++ +T G+ PY
Sbjct: 215 -------RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 2e-12
Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 55/198 (27%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDL 674
I S L +LH + +++RDLKP+N+L+ D L+D G+ K ++ + +T
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILL--DSQGHIVLTDFGLCKE---NIEHNSTTST---- 198
Query: 675 QLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 734
C G T Y APE L + R +D + LG +L+
Sbjct: 199 -------------FC------G----TPEY-----LAPEVLHKQPYDRTVDWWCLGAVLY 230
Query: 735 FCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLR-- 785
+ G P Y + ++ NI+ L L +I A L LL + R
Sbjct: 231 EMLYG--LPPFYSRNTAEMYD---NILNK--PLQLKPNITNSARHLLEGLLQKDRTKRLG 283
Query: 786 --PKAQNVLNHPFFWTAD 801
+ +H FF +
Sbjct: 284 AKDDFMEIKSHVFFSLIN 301
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 58/279 (20%), Positives = 99/279 (35%), Gaps = 83/279 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVA----LKEIQNLIASDQ 525
+ K I G +G V G VA+K L + + L E ++
Sbjct: 51 IHIEKIIGSGDSG-EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS-IMGQFD 108
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HPNI+R GV + + E Y+ +GS + L + D
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTE----------YMENGSLDTFL--RTHDGQF-------- 148
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
QL+ + R + +G+ +L ++G +HRDL +NVL+ +
Sbjct: 149 ------------------TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN--L 188
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+SD G+S+ L+ D G I ++
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTTGGK---------IPIR-------------------- 219
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + + A D++S G +++ + G+ PY
Sbjct: 220 ---WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 3e-12
Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 66/204 (32%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQNA 669
I GL L G+I+RDLK NV++ + K++D G+ K G + C T +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSE-GHI-KIADFGMCKENIWDGVTTKTFCGTPD- 186
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
Y+ APE + +++D ++
Sbjct: 187 --------YI-------------------------------APEIIAYQPYGKSVDWWAF 207
Query: 730 GCILFFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNP 782
G +L+ + G GE F+ +I++ ++ + + EAV + L+ +P
Sbjct: 208 GVLLYEMLAG--QAPFEGEDEDELFQ---SIMEH--NVAYPKSMSKEAVAICKGLMTKHP 260
Query: 783 DLR----PK-AQNVLNHPFFWTAD 801
R P+ +++ H FF D
Sbjct: 261 GKRLGCGPEGERDIKEHAFFRYID 284
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-12
Identities = 61/279 (21%), Positives = 97/279 (34%), Gaps = 84/279 (30%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDVALKEIQ---NLIASDQ 525
K + G+ GTV +G + VA+K L + A KEI ++AS
Sbjct: 17 FKKIKVLGSGAFGTVY-KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
+P++ R G+ V L + + G LL+ VR
Sbjct: 76 NPHVCRLLGICLTST-VQLITQ----------LMPFGC-------------LLDYVR--- 108
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
E+ +I S LL I G+++L + L+HRDL +NVL+
Sbjct: 109 ----EHKDNI--------GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--Q 154
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K++D G++K L + K+ I
Sbjct: 155 HVKITDFGLAKLLGAEEKEYHAEGG--------------KVPI----------------- 183
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E +L T D++S G ++ +T G PY
Sbjct: 184 --KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 3e-12
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 85/319 (26%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRL---VKTHHDVALKEIQNLIASDQH 526
+ F +++ KG+ G+V + + G VAVK+L + H +EI+ ++ S QH
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE-ILKSLQH 101
Query: 527 PNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
NIV++ GV + + + L +E Y+ GS + L ++ +
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIME----------YLPYGSLRDYL--QKHKERI------- 142
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
+LL+ T I G+ +L IHRDL +N+L+ +
Sbjct: 143 -------------------DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE-- 181
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
K+ D G++K L D + Y V + I
Sbjct: 182 NRVKIGDFGLTKVLPQD-------------KEYYKVKEPGESPIF--------------- 213
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764
W APE L + + + A D++S G +L+ T + E I D++ +V
Sbjct: 214 ----WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 765 EHIPEAVDLFTRLLDPNPD 783
H+ E + RL P PD
Sbjct: 270 FHLIELLKNNGRL--PRPD 286
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 53/308 (17%), Positives = 104/308 (33%), Gaps = 73/308 (23%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHD----VALKEIQNLIASD 524
+ K + +G+ G V+ ++ R+VAVK L + + E++ LI
Sbjct: 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 83
Query: 525 QHPNIVRWYGVESDQDF-VYLSLERCTC-SLNDLI---------YVLSGSFEEQLNAKEQ 573
H N+V G + + + +E C +L+ + Y G+ Q
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG 143
Query: 574 DSNLLNEVRIRLLPVMENTKDIELWKANGH-----------------PSAQLLKVTRDIV 616
+ + R+ + +++ + L+ + +
Sbjct: 144 AIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVA 203
Query: 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQL 676
G+ L IHRDL +N+L+S+ K+ D G+++ + D
Sbjct: 204 KGMEFLASRKCIHRDLAARNILLSEKNV--VKICDFGLARDIYKD--------------P 247
Query: 677 VYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 736
Y+ +L + W APE + T D++S G +L+
Sbjct: 248 DYVRKGDARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 288
Query: 737 ITGGKHPY 744
+ G PY
Sbjct: 289 FSLGASPY 296
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 4e-12
Identities = 72/375 (19%), Positives = 124/375 (33%), Gaps = 139/375 (37%)
Query: 479 KEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
K I G+ G V + R+VA+K+L + + A +E+ L+ H NI+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 126
Query: 533 YGV----ESDQDF--VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
V ++ ++F VYL +E +L +I L+ R+ L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----------------QMELDHERMSYL 169
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
Q+L G+ HLH G+IHRDLKP N+++ D C
Sbjct: 170 ------------------LYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSD---C 201
Query: 647 A-KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G++ R G +T Y
Sbjct: 202 TLKILDFGLA-RTAGTSFMMT------------------------------------PYV 224
Query: 706 SSGW-QAPEQLLQGRQTRAIDLFSLGCILFFCITG-----GKH--------------PYG 745
+ + +APE +L +D++S+GCI+ + G+ P
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 746 ESFER---DA--------------------NIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782
E ++ + + +A DL +++L +P
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 344
Query: 783 DLRPKAQNVLNHPFF 797
R + L HP+
Sbjct: 345 AKRISVDDALQHPYI 359
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 4e-12
Identities = 65/353 (18%), Positives = 118/353 (33%), Gaps = 90/353 (25%)
Query: 400 EHITKTGIPKKKKSRRPGYNRNTTNSEKMQNIIPNESKVGETDGLSHITGNGEKFLLTFT 459
I +K+ R + + + Q + + V ETD + I + T+T
Sbjct: 323 GATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEED----TYT 378
Query: 460 DLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVAL 514
+ +R + + + I +G G V +G Y VA+K D
Sbjct: 379 MPSTRDYEIQR--ERIELGRCIGEGQFGDVH-QGIYMSPENPAMAVAIKTCKNCTSDSVR 435
Query: 515 KEIQ---NLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAK 571
++ + HP+IV+ GV ++ V++ +E G L +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIME----------LCTLGELRSFL--Q 482
Query: 572 EQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631
+ +L A L+ + + L++L +HRD
Sbjct: 483 VRKFSL--------------------------DLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691
+ +NVL+S + C KL D G+S+ ++ Y + KL I
Sbjct: 517 IAARNVLVSSN--DCVKLGDFGLSRYMEDS---------------TYYKASKGKLPI--- 556
Query: 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + R T A D++ G ++ + G P+
Sbjct: 557 ----------------KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 28/192 (14%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+ + ++I +G+ G V L VAVK L + +E L+A
Sbjct: 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA-LMAEF 107
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
+PNIV+ GV + + L E Y+ G E L + +
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFE----------YMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS 644
++ A+ L + R + +G+++L E +HRDL +N L+ ++
Sbjct: 158 STRARVSSPGPPPL-----SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN-- 210
Query: 645 FCAKLSDMGISK 656
K++D G+S+
Sbjct: 211 MVVKIADFGLSR 222
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 5e-12
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 67/205 (32%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQNA 669
I+S L LH+ G+I+RDLK NVL+ + C KL+D G+ K G + C T +
Sbjct: 133 IISALMFLHDKGIIYRDLKLDNVLLDHE-GHC-KLADFGMCKEGICNGVTTATFCGTPD- 189
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
Y+ APE L + A+D +++
Sbjct: 190 --------YI-------------------------------APEILQEMLYGPAVDWWAM 210
Query: 730 GCILFFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNP 782
G +L+ + G H E+ FE I+ D ++ + +A + + NP
Sbjct: 211 GVLLYEMLCG--HAPFEAENEDDLFE---AILND--EVVYPTWLHEDATGILKSFMTKNP 263
Query: 783 DLR------PKAQNVLNHPFFWTAD 801
+R +L HPFF D
Sbjct: 264 TMRLGSLTQGGEHAILRHPFFKEID 288
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 5e-12
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 55/191 (28%)
Query: 477 FNKE--IAKGSNGTV---VLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPN 528
F+ + I G G V VL +G VA+KR ++E + ++ +HP+
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLR---DGAKVALKRRTPESSQ-GIEEFETEIETLSFCRHPH 96
Query: 529 IVRWYG--VESDQDF-VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
+V G E ++ +Y + Y+ +G+ + L + + ++
Sbjct: 97 LVSLIGFCDERNEMILIY---K----------YMENGNLKRHLYGSDLPTMSMS------ 137
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
W+ Q L++ GL +LH +IHRD+K N+L+ D++F
Sbjct: 138 ------------WE-------QRLEICIGAARGLHYLHTRAIIHRDVKSINILL--DENF 176
Query: 646 CAKLSDMGISK 656
K++D GISK
Sbjct: 177 VPKITDFGISK 187
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 6e-12
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 54/196 (27%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR-LQGDMSCLTQNATGMD 673
I+ GL LH G+++RDLK N+L+ KD K++D G+ K + GD T
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKD-GHI-KIADFGMCKENMLGDAKTNT------- 177
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G T Y APE LL + ++D +S G +L
Sbjct: 178 --------------FC------G----TPDY-----IAPEILLGQKYNHSVDWWSFGVLL 208
Query: 734 FFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRP 786
+ + G +G+ F +I D + F + EA DL +L P+ R
Sbjct: 209 YEMLIG--QSPFHGQDEEELFH---SIRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRL 261
Query: 787 KAQN-VLNHPFFWTAD 801
+ + HP F +
Sbjct: 262 GVRGDIRQHPLFREIN 277
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 7e-12
Identities = 36/193 (18%), Positives = 77/193 (39%), Gaps = 44/193 (22%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-------VAVKRLVKTHHDVA----LKEIQNLIAS 523
+ ++E+ +GS G V EG +G VA+K + + L E ++
Sbjct: 27 ITMSRELGQGSFGMVY-EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS-VMKE 84
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
++VR GV S + +E + G +L + +R
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIME----------LMTRG-------------DLKSYLRS 121
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+ N ++++++ +I G+++L+ +HRDL +N ++++D
Sbjct: 122 LRPAMANNPVLAPP------SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED- 174
Query: 644 SFCAKLSDMGISK 656
F K+ D G+++
Sbjct: 175 -FTVKIGDFGMTR 186
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 7e-12
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 38/192 (19%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-------VAVKRLVKTHHDVA----LKEIQNLIAS 523
V F +E+ + G V +G+ G + VA+K L E L A
Sbjct: 11 VRFMEELGEDRFGKVY-KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM-LRAR 68
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
QHPN+V GV + + + ++ F + +L + +
Sbjct: 69 LQHPNVVCLLGV---------------VTKDQPLSMI---FSYCSH-----GDLHEFLVM 105
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
R + D + + + + I +G+ +L ++H+DL +NVL+
Sbjct: 106 RSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK- 164
Query: 644 SFCAKLSDMGIS 655
K+SD+G+
Sbjct: 165 -LNVKISDLGLF 175
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 62/273 (22%), Positives = 97/273 (35%), Gaps = 79/273 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVR 531
+ + + G G V G Y G VAVK L + L E L+ QH +VR
Sbjct: 15 LKLVERLGAGQFG-EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN-LMKQLQHQRLVR 72
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
Y V + Q+ +Y+ E Y+ +GS + L K L
Sbjct: 73 LYAVVT-QEPIYIITE----------YMENGSLVDFL--KTPSGIKLT------------ 107
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+LL + I G++ + E IHRDL+ N+L+S K++D
Sbjct: 108 -------------INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT--LSCKIAD 152
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+++ ++ + Y K I W A
Sbjct: 153 FGLARLIEDN---------------EYTAREGAKFPI-------------------KWTA 178
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
PE + G T D++S G +L +T G+ PY
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 58/205 (28%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS---------VAVKRLVKTHHDVA---LKEIQNLIA 522
++FN+ + +G+ + +G V +K L K H + + + +++
Sbjct: 10 LIFNESLGQGTFTKIF-KGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS-MMS 67
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
H ++V YGV D L E +V GS + L K+ + +
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQE----------FVKFGSLDTYL--KKNKNCI----- 110
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
L+V + + + + L E LIH ++ +N+L+ ++
Sbjct: 111 ---------------------NILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE 149
Query: 643 KSF------CAKLSDMGISKRLQGD 661
+ KLSD GIS +
Sbjct: 150 EDRKTGNPPFIKLSDPGISITVLPK 174
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 52/198 (26%)
Query: 475 VVFNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASDQ 525
+ +++ +G G V L EG+ G VAVK L KEI+ ++ +
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE-ILRNLY 81
Query: 526 HPNIVRWYGV--ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
H NIV++ G+ E + + L +E ++ SGS +E L + NL
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIME----------FLPSGSLKEYLPKNKNKINL------ 125
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
Q LK I G+ +L +HRDL +NVL+ +
Sbjct: 126 ----------------------KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE- 162
Query: 644 SFCAKLSDMGISKRLQGD 661
K+ D G++K ++ D
Sbjct: 163 -HQVKIGDFGLTKAIETD 179
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 1e-11
Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 66/204 (32%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR--LQGDMS---CLTQNA 669
I GL L G+I+RDLK NV++ + K++D G+ K G + C T +
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSE-GHI-KIADFGMCKENIWDGVTTKTFCGTPD- 507
Query: 670 TGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729
Y+ APE + +++D ++
Sbjct: 508 --------YI-------------------------------APEIIAYQPYGKSVDWWAF 528
Query: 730 GCILFFCITGGKHP--YGES----FERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNP 782
G +L+ + G GE F+ +I++ ++ + + EAV + L+ +P
Sbjct: 529 GVLLYEMLAG--QAPFEGEDEDELFQ---SIMEH--NVAYPKSMSKEAVAICKGLMTKHP 581
Query: 783 DLR----PK-AQNVLNHPFFWTAD 801
R P+ +++ H FF D
Sbjct: 582 GKRLGCGPEGERDIKEHAFFRYID 605
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 1e-11
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 51/197 (25%)
Query: 615 IVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673
IVS L +LH E +++RDLK +N+++ DK K++D G+ K + T
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML--DKDGHIKITDFGLCKE---GIKDGATMKT--- 308
Query: 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCIL 733
C G+ + APE L RA+D + LG ++
Sbjct: 309 --------------FC---------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVM 339
Query: 734 FFCITGGKHP--YGESFERD-ANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLR---- 785
+ + G Y + E+ I+ + ++ + PEA L + LL +P R
Sbjct: 340 YEMMCG--RLPFYNQDHEKLFELILME--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGG 395
Query: 786 PK-AQNVLNHPFFWTAD 801
+ A+ ++ H FF
Sbjct: 396 SEDAKEIMQHRFFAGIV 412
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 2e-11
Identities = 62/304 (20%), Positives = 110/304 (36%), Gaps = 100/304 (32%)
Query: 477 FNKE--IAKGSNGTV---VLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPN 528
F+ + + +G G V L +G VAVKRL + + Q +I+ H N
Sbjct: 32 FSNKNILGRGGFGKVYKGRLA---DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 529 IVRWYG--VESDQDFVYLSLERCTCSLNDLIY--VLSGSFEEQLNAKEQDSNLLNEVRIR 584
++R G + + R L+Y + +GS L + + L+
Sbjct: 89 LLRLRGFCMTPTE--------RL------LVYPYMANGSVASCLRERPESQPPLD----- 129
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE---IGLIHRDLKPQNVLISK 641
W ++ GL++LH+ +IHRD+K N+L+
Sbjct: 130 -------------WPKR-------QRIALGSARGLAYLHDHCDPKIIHRDVKAANILL-- 167
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
D+ F A + D G++K + + +T G T
Sbjct: 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRG-----------------------------T 198
Query: 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDL 761
+G+ APE L G+ + D+F G +L IT G+ + D + + D+
Sbjct: 199 IGH-----IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF------DLARLANDDDV 246
Query: 762 FLVE 765
L++
Sbjct: 247 MLLD 250
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 35/190 (18%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRL-VKTHHDVA--LKEIQNLIASDQ 525
+V +E+ +G+ G V L + VAVK L T +E + L+ + Q
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE-LLTNLQ 75
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H +IV++YGV D D + + E Y+ G +L +R
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFE----------YMKHG-------------DLNKFLRAHG 112
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
M +Q+L + I SG+ +L +HRDL +N L+ +
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN--L 170
Query: 646 CAKLSDMGIS 655
K+ D G+S
Sbjct: 171 LVKIGDFGMS 180
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 44/254 (17%), Positives = 73/254 (28%), Gaps = 78/254 (30%)
Query: 596 ELWKAN---GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
E K N +P + + + L LHE L H DLKP+N+L +
Sbjct: 110 EFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 169
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ-- 710
++ + S +++ FG F + ++
Sbjct: 170 SCEEKSVKNTS--------------------IRVA------DFGSATFDHEHHTTIVATR 203
Query: 711 ---APEQLLQGRQTRAIDLFSLGCIL---------------------------------- 733
PE +L+ + D++S+GCIL
Sbjct: 204 HYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263
Query: 734 --------FFCITGGKHPYGESFERDANIVKDRKDLFLVEHI--PEAVDLFTRLLDPNPD 783
F+ K K L + + + DL R+L+ +P
Sbjct: 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323
Query: 784 LRPKAQNVLNHPFF 797
R L HPFF
Sbjct: 324 QRITLAEALLHPFF 337
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 56/179 (31%)
Query: 490 VLEGNYEGRSVAVKRLVKTHHDVA--------LKEIQNLIASDQHPNIVRWYG--VESDQ 539
V +G +VAVK+L D+ +EI ++A QH N+V G + D
Sbjct: 47 VYKGYVNNTTVAVKKL-AAMVDITTEELKQQFDQEI-KVMAKCQHENLVELLGFSSDGDD 104
Query: 540 DFVYLSLERCTCSLNDLIY--VLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597
C L+Y + +GS ++L+ + L +R
Sbjct: 105 --------LC------LVYVYMPNGSLLDRLSCLDGTPPLSWHMR--------------- 135
Query: 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656
K+ + +G++ LHE IHRD+K N+L+ D++F AK+SD G+++
Sbjct: 136 -----------CKIAQGAANGINFLHENHHIHRDIKSANILL--DEAFTAKISDFGLAR 181
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 44/192 (22%), Positives = 72/192 (37%), Gaps = 40/192 (20%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-------VAVKRLVKTHHDVA----LKEIQNLIAS 523
+V E+ +G+ G V VAVK L K + A +E + L+
Sbjct: 43 IVLKWELGEGAFGKVF-LAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAE-LLTM 99
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
QH +IVR++GV ++ + + E Y+ G LN
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFE----------YMRHGD--------------LNRFLR 135
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
P + E QLL V + +G+ +L + +HRDL +N L+ +
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG- 194
Query: 644 SFCAKLSDMGIS 655
K+ D G+S
Sbjct: 195 -LVVKIGDFGMS 205
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-11
Identities = 52/282 (18%), Positives = 92/282 (32%), Gaps = 88/282 (31%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRL-------VKTHHDVALKEIQNLIA 522
+ +++ GS G V G ++ S VAVK L + D ++E+ +
Sbjct: 20 LRLLEKLGDGSFGVV-RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVN-AMH 76
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
S H N++R YGV + + E GS ++L ++ +
Sbjct: 77 SLDHRNLIRLYGVVLTPP-MKMVTE----------LAPLGSLLDRL--RKHQGHF----- 118
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
L + + G+ +L IHRDL +N+L++
Sbjct: 119 ---------------------LLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR 157
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
K+ D G+ + L + Y++ K+
Sbjct: 158 D--LVKIGDFGLMRALPQNDDH-------------YVMQEHRKVPF-------------- 188
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE L + A D + G L+ T G+ P+
Sbjct: 189 -----AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-11
Identities = 47/254 (18%), Positives = 81/254 (31%), Gaps = 78/254 (30%)
Query: 596 ELWKANGH---PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ K NG + K+ I ++ LH L H DLKP+N+L + A +
Sbjct: 105 DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI 164
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ-- 710
+R L++ +K+V FG + + S+
Sbjct: 165 KRDERT--------------------LINPDIKVV------DFGSATYDDEHHSTLVSTR 198
Query: 711 ---APEQLLQGRQTRAIDLFSLGCIL---------------------------------- 733
APE +L ++ D++S+GCIL
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 734 --------FFCITGGKHPYGESFERDANIVKDRKDLFLVEHI--PEAVDLFTRLLDPNPD 783
F + + + K K+ L + + DL ++L+ +P
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 784 LRPKAQNVLNHPFF 797
R + L HPFF
Sbjct: 319 KRITLREALKHPFF 332
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 5e-11
Identities = 48/261 (18%), Positives = 87/261 (33%), Gaps = 58/261 (22%)
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLIS-KDKSFCAKLSDM 652
I G P + K+ + ++ GL +LH + +IH D+KP+N+L+S ++ ++
Sbjct: 135 IIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ---FGVLFFTVGYGSSGW 709
+R + +T +LV+ L + + G + + +
Sbjct: 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDI 254
Query: 710 Q-----APEQLLQGRQTRAIDLFSLGCILFFCITG------------------------- 739
Q + E L+ D++S C+ F TG
Sbjct: 255 QTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIEL 314
Query: 740 -GKHPY---------GESFERDANIVKDR--KDLFLVEHIPE-----------AVDLFTR 776
GK P E F + ++ K L E + E D
Sbjct: 315 LGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374
Query: 777 LLDPNPDLRPKAQNVLNHPFF 797
+L+ P+ R A L HP+
Sbjct: 375 MLELIPEKRATAAECLRHPWL 395
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 5e-11
Identities = 24/202 (11%), Positives = 46/202 (22%), Gaps = 68/202 (33%)
Query: 466 VDGR-RIGKLVVFNKEIAKGSNGTV------VLEGNYEGRSVAVKRLVKTHHDVALKEIQ 518
+GR R+ L R VA+ V + +Q
Sbjct: 29 ANGRYRLLIF------HGGVPPLQFWQALDTAL-----DRQVALT-FVDPQGVLPDDVLQ 76
Query: 519 NLI------ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKE 572
+ + P + R V + + E ++ GS +E +
Sbjct: 77 ETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE----------WIRGGSLQEVADT-- 124
Query: 573 QDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632
P ++ + + + H G+
Sbjct: 125 -----------SPSP------------------VGAIRAMQSLAAAADAAHRAGVALSID 155
Query: 633 KPQNVLISKDKSFCAKLSDMGI 654
P V +S D L+
Sbjct: 156 HPSRVRVSIDGD--VVLAYPAT 175
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 55/279 (19%), Positives = 94/279 (33%), Gaps = 86/279 (30%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVA----LKEIQNLIASDQ 525
+ + I +G G V +G Y VA+K D L+E +
Sbjct: 17 IELGRCIGEGQFGDVH-QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFD 74
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HP+IV+ GV ++ V++ +E G L + + +L
Sbjct: 75 HPHIVKLIGVITENP-VWIIME----------LCTLGELRSFL--QVRKYSL-------- 113
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
A L+ + + L++L +HRD+ +NVL+S +
Sbjct: 114 ------------------DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN--D 153
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
C KL D G+S+ ++ Y + KL I
Sbjct: 154 CVKLGDFGLSRYMEDS---------------TYYKASKGKLPI----------------- 181
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W APE + R T A D++ G ++ + G P+
Sbjct: 182 --KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 45/256 (17%), Positives = 76/256 (29%), Gaps = 74/256 (28%)
Query: 596 ELWKANGH---PSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
E+ N + + +I+ L++L ++ L H DLKP+N+L+ + ++
Sbjct: 124 EIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR 183
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ-- 710
++ + + +KL+ FG F Y S
Sbjct: 184 RVTDGKKIQIYRTKSTG--------------IKLI------DFGCATFKSDYHGSIINTR 223
Query: 711 ---APEQLLQGRQTRAIDLFSLGCILFFCITG--------------------GK------ 741
APE +L + D++S GC+L TG
Sbjct: 224 QYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNML 283
Query: 742 --------------------HPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781
P S VK L+ + D +L +
Sbjct: 284 YEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343
Query: 782 PDLRPKAQNVLNHPFF 797
P LRP +L H F
Sbjct: 344 PTLRPSPAELLKHKFL 359
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 70/360 (19%), Positives = 122/360 (33%), Gaps = 80/360 (22%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASD 524
+ + + G+ G V + + VAVK L + + L E +I+
Sbjct: 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKF 90
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
H NIVR GV ++ +E + G +L + +R
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILME----------LMAGG-------------DLKSFLR-E 126
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDK 643
P + + LL V RDI G +L E IHRD+ +N L++
Sbjct: 127 TRPRPSQPSSLAM--------LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 178
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
AK+ D G+++ + S + M L +
Sbjct: 179 GRVAKIGDFGMARDIY-RASYYRKGGCAM-------------LPVK-------------- 210
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLF 762
W PE ++G T D +S G +L+ + G PY +S + V +
Sbjct: 211 -----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
Query: 763 LVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR-LSFLRDVSDRVELEDRE 820
++ P V + T+ P+ RP +L + T D ++ + +E+ E
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEE 325
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 61/279 (21%), Positives = 97/279 (34%), Gaps = 84/279 (30%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDVALKEIQ---NLIASDQ 525
K + G+ GTV +G + VA+K L + A KEI ++AS
Sbjct: 17 FKKIKVLGSGAFGTVY-KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
+P++ R G+ V L + + G LL+ VR
Sbjct: 76 NPHVCRLLGICLTST-VQLITQ----------LMPFGC-------------LLDYVR--- 108
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
E+ +I S LL I G+++L + L+HRDL +NVL+
Sbjct: 109 ----EHKDNI--------GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--Q 154
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K++D G++K L + K+ I
Sbjct: 155 HVKITDFGLAKLLGAEEKEYHAEGG--------------KVPI----------------- 183
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E +L T D++S G ++ +T G PY
Sbjct: 184 --KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 68/359 (18%), Positives = 120/359 (33%), Gaps = 78/359 (21%)
Query: 475 VVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQ 525
+ + + G+ G V + + VAVK L + + + +I+
Sbjct: 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 132
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H NIVR GV ++ LE + G +L + +R
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLE----------LMAGG-------------DLKSFLR-ET 168
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLIS-KDKS 644
P + + LL V RDI G +L E IHRD+ +N L++
Sbjct: 169 RPRPSQPSSLAM--------LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 220
Query: 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704
AK+ D G+++ + + M L +
Sbjct: 221 RVAKIGDFGMARDIY-RAGYYRKGGCAM-------------LPVK--------------- 251
Query: 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFL 763
W PE ++G T D +S G +L+ + G PY +S + V +
Sbjct: 252 ----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 307
Query: 764 VEHIPEAV-DLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR-LSFLRDVSDRVELEDRE 820
++ P V + T+ P+ RP +L + T D ++ + +E+ E
Sbjct: 308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEE 366
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 49/264 (18%), Positives = 75/264 (28%), Gaps = 100/264 (37%)
Query: 596 ELWKAN---GHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
EL K N G + K I+ L LH+ +IH DLKP+N+L+ + K+ D
Sbjct: 187 ELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G S + Y+ S F+ +AP
Sbjct: 247 GSSCYEHQRVY-------------TYIQS----------------RFY---------RAP 268
Query: 713 EQLLQGRQTRAIDLFSLGCIL--------------------------------------- 733
E +L R ID++SLGCIL
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR 328
Query: 734 ---FFCITGGKH--------------PYGESFERDANIVKDRKDLFLVEHIPEA---VDL 773
F G G S + ++ + +D
Sbjct: 329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF 388
Query: 774 FTRLLDPNPDLRPKAQNVLNHPFF 797
+ L+ +P +R L HP+
Sbjct: 389 LKQCLEWDPAVRMTPGQALRHPWL 412
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 3e-10
Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 98/285 (34%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVA----LKEIQNLIASDQ 525
VV N+ + +G G V EG Y VAVK K + E ++ +
Sbjct: 14 VVLNRILGEGFFGEV-YEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLD 71
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HP+IV+ G+ ++ ++ +E G L + +L
Sbjct: 72 HPHIVKLIGIIEEEP-TWIIME----------LYPYGELGHYLERNKNSLKVL------- 113
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L+ + I +++L I +HRD+ +N+L++
Sbjct: 114 ---------------------TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP--E 150
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
C KL D G+S+ ++ + Y Y
Sbjct: 151 CVKLGDFGLSRYIEDE---------------DY-------------------------YK 170
Query: 706 SSG------WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
+S W +PE + R T A D++ ++ ++ GK P+
Sbjct: 171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 55/279 (19%), Positives = 93/279 (33%), Gaps = 84/279 (30%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS------VAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+ K + G GTV +G + V +K + + + + I S
Sbjct: 15 LRKLKVLGSGVFGTVH-KGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
H +IVR G+ + L + Y+ GS LL+ VR
Sbjct: 74 HAHIVRLLGLCPGSS-LQLVTQ----------YLPLGS-------------LLDHVR--- 106
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
++ + LL I G+ +L E G++HR+L +NVL+
Sbjct: 107 ----QHRGAL--------GPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSP--S 152
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
+++D G++ L D L+ K I
Sbjct: 153 QVQVADFGVADLLPPDDK--------------QLLYSEAKTPI----------------- 181
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E + G+ T D++S G ++ +T G PY
Sbjct: 182 --KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 50/279 (17%), Positives = 87/279 (31%), Gaps = 81/279 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVALKEIQN---LIASDQH 526
V FN+ I +G G V G AVK L + + + ++ H
Sbjct: 91 VHFNEVIGRGHFGCVY-HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 527 PNIVRWYGVESDQDF-VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
PN++ G+ + + L Y+ G + + + N
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLP----------YMKHGDLRNFI--RNETHNP-------- 189
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L+ + G+ L +HRDL +N ++ + F
Sbjct: 190 ------------------TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--F 229
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K++D G+++ + N TG KL +
Sbjct: 230 TVKVADFGLARDMYDKEFDSVHNKTG------------AKLPVK---------------- 261
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E L + T D++S G +L+ +T G PY
Sbjct: 262 ---WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 48/279 (17%), Positives = 89/279 (31%), Gaps = 81/279 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVALKEIQ---NLIASDQH 526
++ I KG G V G Y ++ A+K L + ++ L+ H
Sbjct: 23 THSDRVIGKGHFGVVY-HGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 527 PNIVRWYGVESDQD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
PN++ G+ + ++ L Y+ G + + + N
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLP----------YMCHGDLLQFI--RSPQRNP-------- 121
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L+ + G+ +L E +HRDL +N ++ + F
Sbjct: 122 ------------------TVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES--F 161
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K++D G+++ + Q +L +
Sbjct: 162 TVKVADFGLARDILDREYYSVQQHRHA------------RLPV----------------- 192
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E L R T D++S G +L+ +T G PY
Sbjct: 193 --KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 53/198 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRL---VKTHHDVA--LKEIQNLIASD 524
+ + KG G+V E + VAVK L + D+ L+E +
Sbjct: 25 FTLGRMLGKGEFGSVR-EAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAA-CMKEF 82
Query: 525 QHPNIVRWYGVESDQD------FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL 578
HP++ + GV + L ++ G +L
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILP----------FMKHG-------------DLH 119
Query: 579 NEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVL 638
+ + EN ++ P L++ DI G+ +L IHRDL +N +
Sbjct: 120 AFLLASRIG--ENPFNL--------PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM 169
Query: 639 ISKDKSFCAKLSDMGISK 656
+++D ++D G+S+
Sbjct: 170 LAED--MTVCVADFGLSR 185
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 46/258 (17%), Positives = 86/258 (33%), Gaps = 94/258 (36%)
Query: 596 ELWKANGH---PSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISK----DKSFCA 647
L K H P + ++++ ++ GL ++H G+IH D+KP+NVL+ +
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 177
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K++D+G +C +Q +
Sbjct: 178 KIADLG--------NACWYDEHYTNSIQ------------------------------TR 199
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITG-----GKHPYGESFERD--ANIV----- 755
+++PE LL D++S C++F ITG + + + D A I+
Sbjct: 200 EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 756 ------------------------------KDRKDL------FLVEHIPEAVDLFTRLLD 779
+D+ F + E D + +L
Sbjct: 260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319
Query: 780 PNPDLRPKAQNVLNHPFF 797
+P R A ++NHP+
Sbjct: 320 LDPRKRADAGGLVNHPWL 337
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 50/279 (17%), Positives = 88/279 (31%), Gaps = 81/279 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-----SVAVKRLVKTHHDVALKEIQN---LIASDQH 526
V FN+ I +G G V G AVK L + + + ++ H
Sbjct: 27 VHFNEVIGRGHFGCVY-HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 527 PNIVRWYGVESDQDF-VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
PN++ G+ + + L Y+ G + + + N
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLP----------YMKHGDLRNFI--RNETHNP-------- 125
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L+ + G+ +L +HRDL +N ++ + F
Sbjct: 126 ------------------TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK--F 165
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K++D G+++ + N TG KL +
Sbjct: 166 TVKVADFGLARDMYDKEYYSVHNKTG------------AKLPVK---------------- 197
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY 744
W A E L + T D++S G +L+ +T G PY
Sbjct: 198 ---WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 52/197 (26%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGRS-----VAVKRLVKTHHDVA-----LKEIQNLIASD 524
++ K + +G G+V+ EGN + VAVK + + L E +
Sbjct: 36 LILGKILGEGEFGSVM-EGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAA-CMKDF 93
Query: 525 QHPNIVRWYGVESDQD-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN 579
HPN++R GV + + L ++ G +L
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILP----------FMKYG-------------DLHT 130
Query: 580 EVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI 639
+ L T + P LLK DI G+ +L +HRDL +N ++
Sbjct: 131 YLLYSRLE----TGPKHI------PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML 180
Query: 640 SKDKSFCAKLSDMGISK 656
D ++D G+SK
Sbjct: 181 RDD--MTVCVADFGLSK 195
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 48/195 (24%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRL-VKTHHDVALKEIQNLIASDQHP 527
+G K+I G+ G + L N Y VA+K +K+ E +
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 65
Query: 528 NI--VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
I V ++G + + LE SL DL + +F
Sbjct: 66 GIPQVYYFGPC--GKYNAMVLELLGPSLEDLFDLCDRTF--------------------- 102
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ K + L + ++S + ++H LI+RD+KP+N LI + +
Sbjct: 103 -----SLKTV-------------LMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNK 144
Query: 646 CAK---LSDMGISKR 657
+ + D ++K
Sbjct: 145 TQQVIHIIDFALAKE 159
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-07
Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 55/203 (27%)
Query: 463 DDRVDGR-RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVKR-LVKTHHDVALKEIQN 519
++ V ++G+ I +GS G + N + VA+K ++ E +
Sbjct: 5 NNVVGVHYKVGR------RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT 58
Query: 520 LIASDQHPNI--VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL 577
I V ++G E L ++ SL DL+ + F
Sbjct: 59 YKLLAGCTGIPNVYYFGQE--GLHNVLVIDLLGPSLEDLLDLCGRKF------------- 103
Query: 578 LNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637
+ K + + +++ + +HE L++RD+KP N
Sbjct: 104 -------------SVKTV-------------AMAAKQMLARVQSIHEKSLVYRDIKPDNF 137
Query: 638 LISKDKSFCAK---LSDMGISKR 657
LI + S A + D G+ K
Sbjct: 138 LIGRPNSKNANMIYVVDFGMVKF 160
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 59/273 (21%), Positives = 93/273 (34%), Gaps = 88/273 (32%)
Query: 478 NKEIAKGSNGTVVLEGNYE-GRSVAVK--RLVKTHHDVALKEIQNL------IASDQHPN 528
+ I KGS G VV + VA+K + K + A E++ L ++
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY-Y 117
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
IV ++ + L E + +L DL+ + + ++ R
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLL-------------RNTNFRGVSLNLTR---- 160
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH--EIGLIHRDLKPQNVLISKDKSFC 646
K + + + L L E+ +IH DLKP+N+L+ K
Sbjct: 161 ---------------------KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA 199
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G SC Y+ S +F Y
Sbjct: 200 IKIVDFG--------SSCQLGQRIY-----QYIQS------------RF--------Y-- 224
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITG 739
++PE LL AID++SLGCIL TG
Sbjct: 225 ---RSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-06
Identities = 45/194 (23%), Positives = 69/194 (35%), Gaps = 46/194 (23%)
Query: 469 RRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKR-LVKTHHDVALKEIQNLIASDQH 526
R+G ++I GS G + L G VA+K VKT H E +
Sbjct: 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 64
Query: 527 PNI--VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
I +RW G E D+ + +E SL DL S F
Sbjct: 65 VGIPTIRWCGAE--GDYNVMVMELLGPSLEDLFNFCSRKF-------------------- 102
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISK-DK 643
+ K + L + ++S + ++H IHRD+KP N L+ K
Sbjct: 103 ------SLKTV-------------LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 143
Query: 644 SFCAKLSDMGISKR 657
+ D G++K+
Sbjct: 144 GNLVYIIDFGLAKK 157
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-06
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 596 ELWKANGHPSAQL-LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
++ NG L++ ++ L ++HE +H D+K N+L+ L+D G+
Sbjct: 140 KISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL 199
Query: 655 SKR 657
S R
Sbjct: 200 SYR 202
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 53/202 (26%)
Query: 462 IDDRVDGR-RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKR-LVKTHHDVALKEIQ 518
++ RV + R+G+ +I GS G + L N VA+K VKT H L E +
Sbjct: 1 MEPRVGNKFRLGR------KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK 54
Query: 519 NLIASDQHPNI--VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN 576
I VRW+GVE D+ L ++ SL DL S
Sbjct: 55 IYRILQGGTGIPNVRWFGVE--GDYNVLVMDLLGPSLEDLFNFCSRKL------------ 100
Query: 577 LLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQN 636
+ K + L + +++ + +H +HRD+KP N
Sbjct: 101 --------------SLKTV-------------LMLADQMINRVEFVHSKSFLHRDIKPDN 133
Query: 637 VLISKDKSF-CAKLSDMGISKR 657
L+ + + D G++K+
Sbjct: 134 FLMGLGRRANQVYIIDFGLAKK 155
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
L+V ++ L LHE +H ++ +N+ + + L+ G + R
Sbjct: 162 LQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-05
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
I+ L ++HE +H D+K N+L++ L D G++ R
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 13/188 (6%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVK-------RLVKTHHDVALKEIQNLIASDQHPNIVR 531
++I +G G V + VA+K LV H +EI I + +++
Sbjct: 26 EKIGEGVFGEVFQ-TIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLS 84
Query: 532 WYGVESDQDFVYL-SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ F+ L S+ S L+ + + + + ++ ++ E
Sbjct: 85 GEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE 144
Query: 591 N-TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAK 648
D+E + A + + + L+ + HRDL NVL+ K+ K
Sbjct: 145 FGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL--KKTSLKK 202
Query: 649 LSDMGISK 656
L K
Sbjct: 203 LHYTLNGK 210
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 934 | |||
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.89 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.84 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 99.83 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.59 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.53 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.97 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.82 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.68 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.51 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.32 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.3 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.08 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.06 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.05 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.05 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.05 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.05 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.93 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.87 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.81 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.78 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.75 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.74 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 97.72 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.67 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.66 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.64 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 97.61 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 97.55 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.52 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.51 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 97.5 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.2 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 97.2 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.13 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 97.05 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 96.98 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 96.94 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.67 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 96.62 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.4 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 96.35 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 96.15 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.1 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 96.08 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 96.07 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.0 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 95.86 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 95.7 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.62 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.5 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.46 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 95.17 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 95.15 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 95.15 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 94.95 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 94.76 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 94.67 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 94.63 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 94.33 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 94.33 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 94.31 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 94.29 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 94.26 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 94.24 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 94.15 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 93.6 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 93.55 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 93.49 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 93.47 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 93.36 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 93.34 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 93.28 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 93.21 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 92.98 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 92.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 92.92 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 92.85 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 92.83 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 92.68 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 92.64 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 92.56 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 92.5 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 92.49 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 92.43 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 92.07 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 91.93 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 91.87 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 91.73 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 91.71 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 91.68 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 91.68 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 91.63 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 91.63 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 91.53 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 91.33 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 91.18 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 91.17 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 91.15 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 91.07 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 90.99 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 90.9 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 90.73 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 90.5 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 90.16 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 89.89 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 89.82 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 89.72 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 89.68 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 89.46 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 89.36 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 89.36 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 89.32 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 89.23 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 89.11 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 89.11 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 89.01 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 88.73 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 88.46 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 88.24 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 87.75 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 87.64 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 87.47 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 87.46 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 87.08 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 86.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 86.77 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 86.6 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 86.59 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 86.38 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 86.11 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 85.86 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 85.66 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 85.58 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 85.58 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 85.11 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 85.11 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 85.07 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 85.07 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 85.04 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 85.01 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 85.01 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 84.44 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 84.41 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 84.41 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 84.37 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 83.92 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 83.25 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 83.22 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 83.08 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 82.96 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 82.81 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 82.69 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 82.4 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 82.33 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 82.02 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 82.01 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 81.85 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 81.61 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 81.45 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 81.35 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 81.35 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 80.67 |
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-72 Score=650.42 Aligned_cols=398 Identities=40% Similarity=0.776 Sum_probs=323.1
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.+.|...+.||+|+||+||+++..+|+.||||++.....+...+|+..+....+|||||++++++.+++.+|||||+
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 44567788899999999999998888899999999998776667788888555567999999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.++|.+++...... ... ....++..++.++.||+.||+|||++|||
T Consensus 91 ~~gsL~~~l~~~~~~-~~~--------------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 137 (434)
T 2rio_A 91 CNLNLQDLVESKNVS-DEN--------------------------------LKLQKEYNPISLLRQIASGVAHLHSLKII 137 (434)
T ss_dssp CSEEHHHHHHTC---------------------------------------------CCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCHHHHHhccCCC-chh--------------------------------hhhccchhHHHHHHHHHHHHHHHHHCCcc
Confidence 988888877421100 000 00012234678999999999999999999
Q ss_pred ccCCCCCeEEEecC-----------CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 629 HRDLKPQNVLISKD-----------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 629 HRDLKP~NILl~~d-----------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||||||+|||++.+ +...+||+|||+|+.+..........
T Consensus 138 HrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~----------------------------- 188 (434)
T 2rio_A 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN----------------------------- 188 (434)
T ss_dssp CCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------------
T ss_pred ccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceee-----------------------------
Confidence 99999999999753 34579999999999876543221100
Q ss_pred ceeecCCCCCccccchhccc-------CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccccccc------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV------ 764 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~------ 764 (934)
....+||+.|+|||++.+ ..++.++|||||||++|||+++|.+||+.......+++.........
T Consensus 189 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~ 266 (434)
T 2rio_A 189 --LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDR 266 (434)
T ss_dssp --------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCH
T ss_pred --ecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccc
Confidence 012469999999999976 56899999999999999999977999987766655555543322211
Q ss_pred CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhhhhhcccchhccccchHHHHHHHHhhhhHh-cCCcchh
Q 002343 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVA-LNGKWDE 843 (934)
Q Consensus 765 ~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl~~~sd~~e~~~~~~~~~l~~~le~~~~~~-~~~~w~~ 843 (934)
..++++.+||.+||+.||++|||+.++++|||||...+++.++.+++++.+.+.+...+.++..++.....+ .+++|..
T Consensus 267 ~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (434)
T 2rio_A 267 SLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTV 346 (434)
T ss_dssp HHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCHHHHHHHHHHHHHHHHTSCBTTBCHHHHHHHTTHHHHSCSSCGGG
T ss_pred cchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCcHHHHHHHHHHHHHHhhcccCCchHHHHHHHhCCCeeeeCCChhH
Confidence 123689999999999999999999999999999999999999999999999888877778888887765544 4789999
Q ss_pred hhhHHHHhhhhhhccCCCCCHHHHHHHHHhccCCCccChHHHHHHhCCCCccccccccccCCchHHHHHHHHHhhccCcc
Q 002343 844 KMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEE 923 (934)
Q Consensus 844 ~~~~~~~~~l~~~r~y~~~~v~dllr~irnk~~h~~el~~~~~~~lg~~p~~~~~yf~~~fP~ll~~~y~~~~~~~~~~~ 923 (934)
++++.+++++++||+|++++++||||+||||+|||+|||+++++++|++|+||.+||.+|||+||+|||++++++|++|+
T Consensus 347 ~~~~~~~~~l~~~~~y~~~~~~dllr~~rn~~~h~~~~~~~~~~~~~~~~~~~~~y~~~~fp~l~~~~y~~~~~~~~~~~ 426 (434)
T 2rio_A 347 KFDKTFMDNLERYRKYHSSKLMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQ 426 (434)
T ss_dssp GSCSTTCC-----CCCCSSCHHHHHHHHHHHHHTGGGSCHHHHHHTCSTTHHHHHHHHHHCTTHHHHHHHHHHHHCTTCT
T ss_pred hcCHHHHhhccCccccCcchHHHHHHHHHchhhhhhhhCHHHHHHhCCCchHHHHHHHHhccHHHHHHHHHHHhhccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 002343 924 VFHKYVT 930 (934)
Q Consensus 924 ~f~~y~~ 930 (934)
.|++||.
T Consensus 427 ~~~~~~~ 433 (434)
T 2rio_A 427 ILREFLY 433 (434)
T ss_dssp TTHHHHH
T ss_pred HHHHhhc
Confidence 9999996
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-71 Score=642.52 Aligned_cols=386 Identities=35% Similarity=0.691 Sum_probs=319.3
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
..|...+.||+|+||+||..+..+|+.||||++.........+|++.+....+|||||++++++.+.++.|||||+|.++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~ 103 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT 103 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCC
Confidence 35888999999999998888889999999999977665556778874444448999999999999999999999999988
Q ss_pred hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 002343 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (934)
Q Consensus 553 L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDL 632 (934)
|.+++.... ..+++.+++.++.||+.||+|||++|||||||
T Consensus 104 L~~~l~~~~---------------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl 144 (432)
T 3p23_A 104 LQEYVEQKD---------------------------------------FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDL 144 (432)
T ss_dssp HHHHHHSSS---------------------------------------CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHhcC---------------------------------------CCccchhHHHHHHHHHHHHHHHHHCcCEeCCC
Confidence 877763211 11223346789999999999999999999999
Q ss_pred CCCeEEEec---CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 633 KPQNVLISK---DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 633 KP~NILl~~---d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
||+|||++. ++...+||+|||+|+.+......... .+..+||+.|
T Consensus 145 Kp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~--------------------------------~~~~~gt~~y 192 (432)
T 3p23_A 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR--------------------------------RSGVPGTEGW 192 (432)
T ss_dssp STTSEEECCCBTTTBCCEEECCTTEEECC--------------------------------------------CCSCTTS
T ss_pred CHHHEEEecCCCCCceeEEEecccceeeccCCCcceee--------------------------------ccccCCCcCc
Confidence 999999953 44567899999999877644321111 1125699999
Q ss_pred ccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccccccc----CCCHHHHHHHHHcccCCC
Q 002343 710 QAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV----EHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 710 ~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~----~~~~e~~dLI~~~L~~DP 782 (934)
+|||++. ...++.++|||||||++|||++++.+||+................... ..++.+.+||.+||+.||
T Consensus 193 ~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 272 (432)
T 3p23_A 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDP 272 (432)
T ss_dssp CCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSG
T ss_pred cChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCH
Confidence 9999997 456788999999999999999978999987766666555443322211 123468999999999999
Q ss_pred CCCcCHHHHHcCCCCCCccchhhhhhhhcccchhccccchHHHHHHHHhhhhHhcCCcchhhhhHHHHhhhhhhccCCCC
Q 002343 783 DLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYD 862 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~~~~~fl~~~sd~~e~~~~~~~~~l~~~le~~~~~~~~~~w~~~~~~~~~~~l~~~r~y~~~ 862 (934)
++|||+.++++|||||..+++..++++++++.+.+.. ...+...++.....+...+|.++++..++.++++||+|+++
T Consensus 273 ~~Rps~~evl~hp~f~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~w~~~i~~~~~~~l~~~~~~~~~ 350 (432)
T 3p23_A 273 QKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESL--DGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGG 350 (432)
T ss_dssp GGSCCHHHHHTSTTTCCHHHHHHHHHHHHHHCSCSCS--SCHHHHHHHHTCSTTTTSCGGGSSCHHHHHHTSSCCSCCSS
T ss_pred hhCCCHHHHHhCccccChHHHHHHHHHHHHHhhcccc--cchHHHHHHHcccccccCcHHHhcCHHHHHhccCccCcChh
Confidence 9999999999999999999999999999988765543 45677788877777778999999999999999999999999
Q ss_pred CHHHHHHHHHhccCCCccChHHHHHHhCCCCccccccccccCCchHHHHHHHHHhhccCccccccccccC
Q 002343 863 NVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 932 (934)
Q Consensus 863 ~v~dllr~irnk~~h~~el~~~~~~~lg~~p~~~~~yf~~~fP~ll~~~y~~~~~~~~~~~~f~~y~~~~ 932 (934)
+++||||+||||+|||+|||+++|+.+|++||||++||++|||+||||||++| ++|++|+.|++||..+
T Consensus 351 ~~~dllr~~rn~~~h~~~~~~~~~~~~g~~p~~~~~y~~~~fp~l~~~~y~~~-~~~~~~~~~~~~~~~~ 419 (432)
T 3p23_A 351 SVRDLLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAM-ELCSHERLFQPYYFHE 419 (432)
T ss_dssp CHHHHHHHHHHHHHTTTTSCHHHHHHHCSTTHHHHHHHHSSCTTHHHHHHHHG-GGGSSSGGGTTTCCC-
T ss_pred HHHHHHHHHhCchhchhhcCHHHHHhhCCCchHHHHHHHhhCcHHHHHHHHHH-HHcCCchhhhhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999 5899999999999754
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-54 Score=467.11 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=193.1
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
|.+++ +|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++|||||++++++.+++
T Consensus 9 G~~ig-~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~ 86 (275)
T 3hyh_A 9 GAHIG-NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS-YLRLLRHPHIIKLYDVIKSKD 86 (275)
T ss_dssp ------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHH-HHHHCCCTTBCCEEEEEECSS
T ss_pred CCEee-CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHH-HHHHCCCCCCCeEEEEEEECC
Confidence 45554 588899999999999999854 5799999999975431 34566776 788999999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|||||||+++|.+++. +...+++.+++.++.||+.||+
T Consensus 87 ~~~ivmEy~~g~L~~~l~----------------------------------------~~~~l~e~~~~~~~~qi~~al~ 126 (275)
T 3hyh_A 87 EIIMVIEYAGNELFDYIV----------------------------------------QRDKMSEQEARRFFQQIISAVE 126 (275)
T ss_dssp EEEEEEECCCEEHHHHHH----------------------------------------HSCSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHH----------------------------------------HcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999877766652 1345789999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++|||||||||+|||++.++. +||+|||+|+....... .
T Consensus 127 ylH~~~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~~~~------------------------------------~ 168 (275)
T 3hyh_A 127 YCHRHKIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDGNF------------------------------------L 168 (275)
T ss_dssp HHHHTTCCCCCCCTTTEEECTTCC--EEECCSSCC---------------------------------------------
T ss_pred HHHHCCcccccCChHHeEECCCCC--EEEeecCCCeecCCCCc------------------------------------c
Confidence 999999999999999999976654 99999999986543221 1
Q ss_pred ecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
++.+||+.|||||++.+..| +.++|||||||++|+|+|| .+||... .......+.......+...++++++||.+||
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L 247 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR-RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 247 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHS
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence 12579999999999998886 6899999999999999996 6677554 3333444444444455667899999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~ 799 (934)
+.||++|||++|+++||||+.
T Consensus 248 ~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 248 IVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp CSSGGGSCCHHHHHHCHHHHT
T ss_pred cCChhHCcCHHHHHcCccccc
Confidence 999999999999999999953
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=470.22 Aligned_cols=255 Identities=27% Similarity=0.394 Sum_probs=207.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++++++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-VMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4588999999999999999854 579999999997532 234566765 88999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.++|.. .+.+++.+++.++.||+.||+|||++
T Consensus 111 mEy~~g----------G~L~~~i~~-----------------------------~~~l~e~~~~~~~~qi~~al~ylH~~ 151 (311)
T 4aw0_A 111 LSYAKN----------GELLKYIRK-----------------------------IGSFDETCTRFYTAEIVSALEYLHGK 151 (311)
T ss_dssp ECCCTT----------EEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCC----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 997764 344443321 35678999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+||||+.++. +||+|||+|+.+........ ..+.+|
T Consensus 152 ~IiHRDlKPeNILl~~~g~--vKl~DFGla~~~~~~~~~~~---------------------------------~~~~~G 196 (311)
T 4aw0_A 152 GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQAR---------------------------------ANSFVG 196 (311)
T ss_dssp TEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTTTCCC---------------------------------BCCCCS
T ss_pred CCccCCCCHHHeEEcCCCC--EEEEEcCCceecCCCCCccc---------------------------------ccCccc
Confidence 9999999999999977664 99999999998764322111 112689
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|||||++.+..|+.++|||||||++|||++| .+||.. ........+......++...++++++||.+||+.||++
T Consensus 197 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~ 275 (311)
T 4aw0_A 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 275 (311)
T ss_dssp CGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGG
T ss_pred CcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhH
Confidence 9999999999999999999999999999999996 666654 44444443444444556677899999999999999999
Q ss_pred CcCHHH------HHcCCCCCCccch
Q 002343 785 RPKAQN------VLNHPFFWTADTR 803 (934)
Q Consensus 785 RPTa~e------vL~HPff~~~~~~ 803 (934)
|||++| |++||||.+.++.
T Consensus 276 R~t~~e~~~~~~i~~Hp~F~~idw~ 300 (311)
T 4aw0_A 276 RLGCEEMEGYGPLKAHPFFESVTWE 300 (311)
T ss_dssp STTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred CcChHHHcCCHHHHCCCCcCCCCHH
Confidence 999987 6899999887764
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-53 Score=474.13 Aligned_cols=251 Identities=25% Similarity=0.411 Sum_probs=203.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.++||+|+||+||++.. .+|+.||||++.... .+...+|+. +++.++|||||++++++.+++.+||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 5688899999999999999855 579999999996432 244667876 88899999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|++ |+|.+++. ..++++.+++.++.||+.||+|||++|||
T Consensus 153 ~~g----------g~L~~~l~------------------------------~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii 192 (346)
T 4fih_A 153 LEG----------GALTDIVT------------------------------HTRMNEEQIAAVCLAVLQALSVLHAQGVI 192 (346)
T ss_dssp CTT----------EEHHHHHH------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCC----------CcHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 764 33333321 34578899999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+||||+.++. +||+|||+|+.+....... +..+||+.
T Consensus 193 HRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~~~~-----------------------------------~~~~GTp~ 235 (346)
T 4fih_A 193 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRR-----------------------------------KSLVGTPY 235 (346)
T ss_dssp CCCCSGGGEEECTTCC--EEECCCTTCEECCSSSCCB-----------------------------------CCCCSCGG
T ss_pred cccCCHHHEEECCCCC--EEEecCcCceecCCCCCcc-----------------------------------cccccCcC
Confidence 9999999999977765 9999999999875532211 12689999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhccc---ccccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~---~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|||||++.+..|+.++|||||||++|||++| .+||.. ........+..... ..+...++++++||.+||+.||++
T Consensus 236 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G-~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~ 314 (346)
T 4fih_A 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314 (346)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTT
T ss_pred cCCHHHHCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhH
Confidence 9999999999999999999999999999997 666644 43333333333221 123456789999999999999999
Q ss_pred CcCHHHHHcCCCCCCccc
Q 002343 785 RPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 785 RPTa~evL~HPff~~~~~ 802 (934)
|||++|+|+||||.....
T Consensus 315 R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 315 RATAAELLKHPFLAKAGP 332 (346)
T ss_dssp SCCHHHHTTCGGGGGCCC
T ss_pred CcCHHHHhcCHhhcCCCC
Confidence 999999999999975443
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-53 Score=471.95 Aligned_cols=252 Identities=24% Similarity=0.418 Sum_probs=197.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.++|||||++++++.+++.+||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA-VLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHH-HHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4689999999999999999854 5699999999975432 34556765 888999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||++ |+|.++|... +...+++.+++.|+.||+.||+|||++|
T Consensus 103 Ey~~g----------g~L~~~i~~~---------------------------~~~~~~e~~~~~~~~qi~~aL~ylH~~~ 145 (350)
T 4b9d_A 103 DYCEG----------GDLFKRINAQ---------------------------KGVLFQEDQILDWFVQICLALKHVHDRK 145 (350)
T ss_dssp ECCTT----------CBHHHHHHHT---------------------------TTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCC----------CcHHHHHHHc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 97763 3444443221 1234678899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+||||+.++. +||+|||+|+.+...... .+..+||
T Consensus 146 IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~~~-----------------------------------~~~~~GT 188 (350)
T 4b9d_A 146 ILHRDIKSQNIFLTKDGT--VQLGDFGIARVLNSTVEL-----------------------------------ARACIGT 188 (350)
T ss_dssp CEETTCCGGGEEECTTCC--EEECSTTEESCCCHHHHH-----------------------------------HHHHHSC
T ss_pred eeeccCCHHHEEECCCCC--EEEcccccceeecCCccc-----------------------------------ccccCCC
Confidence 999999999999977765 999999999876432110 0124699
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHH-HHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+.|||||++.+..|+.++|||||||+||||+|| .+||... .... ..+.....+..+...++++++||.+||+.||++
T Consensus 189 ~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG-~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 267 (350)
T 4b9d_A 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTL-KHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRD 267 (350)
T ss_dssp CTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhH
Confidence 999999999999999999999999999999996 6677543 3332 344444444445567899999999999999999
Q ss_pred CcCHHHHHcCCCCCCc
Q 002343 785 RPKAQNVLNHPFFWTA 800 (934)
Q Consensus 785 RPTa~evL~HPff~~~ 800 (934)
|||++|+|+||||...
T Consensus 268 R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 268 RPSVNSILEKGFIAKR 283 (350)
T ss_dssp SCCHHHHHTSHHHHTT
T ss_pred CcCHHHHhcCHHhhcC
Confidence 9999999999999643
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=462.46 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=199.9
Q ss_pred ceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||+||++... +++.||||++.+.. .....+|+. +++.++|||||++++++.+++.+|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD-ILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------C-CCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHH-HHHHCCCCCCCeEEEEEEECCEEE
Confidence 46999999999999999998652 47899999996532 234556665 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||++ |+|.++|.. ...+++.+++.++.||+.||+|||
T Consensus 103 ivmEy~~g----------g~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 103 LILDFLRG----------GDLFTRLSK-----------------------------EVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp EEECCCTT----------CEEHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997763 444443321 356789999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.++. +||+|||+|+........ .++.
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~~~-----------------------------------~~~~ 186 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKK-----------------------------------AYSF 186 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSC--EEEESSEEEEC-----CC-----------------------------------CCSC
T ss_pred HCCCcCCCCCHHHeEEcCCCC--EEecccccceeccCCCcc-----------------------------------cccc
Confidence 999999999999999977765 999999999865432211 1126
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+||+.|||||++.+..|+.++|||||||++|||+|| .+||.. ........+......++...++++++||.+||+.||
T Consensus 187 ~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP 265 (304)
T 3ubd_A 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-TLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNP 265 (304)
T ss_dssp CCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred ccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhC-CCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCH
Confidence 799999999999999999999999999999999996 667654 333444444444444556678999999999999999
Q ss_pred CCCcC-----HHHHHcCCCCCCccch
Q 002343 783 DLRPK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 783 ~~RPT-----a~evL~HPff~~~~~~ 803 (934)
++||| ++|+++||||.+.++.
T Consensus 266 ~~R~ta~~~~~~eil~Hp~f~~idw~ 291 (304)
T 3ubd_A 266 ANRLGAGPDGVEEIKRHSFFSTIDWN 291 (304)
T ss_dssp GGSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred HHCCCCCcCCHHHHHcCccccCCCHH
Confidence 99998 4799999999887654
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-52 Score=475.93 Aligned_cols=250 Identities=26% Similarity=0.416 Sum_probs=204.3
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.+.|.+.++||+|+||+||++.. .+|+.||||++.... .+...+|+. +++.++|||||++++++.+++.+|||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHH-HHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 35689999999999999999855 569999999996543 245677876 8889999999999999999999999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||++ +|.+++ . ..++++.+++.|++||+.||+|||++|
T Consensus 229 y~~gG~L~~~i-----------~------------------------------~~~l~e~~~~~~~~qil~aL~ylH~~~ 267 (423)
T 4fie_A 229 FLEGGALTDIV-----------T------------------------------HTRMNEEQIAAVCLAVLQALSVLHAQG 267 (423)
T ss_dssp CCTTEEHHHHH-----------H------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCcHHHHH-----------h------------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7764 444433 1 345788999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+||||+.++. +||+|||+|+.+....... +..+||
T Consensus 268 IiHRDiKp~NILl~~~g~--vKl~DFGla~~~~~~~~~~-----------------------------------~~~~GT 310 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRR-----------------------------------KSLVGT 310 (423)
T ss_dssp EECCCCSTTTEEECTTCC--EEECCCTTCEECCSSCCCB-----------------------------------CCCEEC
T ss_pred eecccCCHHHEEEcCCCC--EEEecCccceECCCCCccc-----------------------------------cccccC
Confidence 999999999999977765 9999999999875532211 126799
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhccc---ccccCCCHHHHHHHHHcccCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKD---LFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~---~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+.|||||++.+..|+.++|||||||++|||++| .+||.. ........+..... ......++++++||.+||+.||
T Consensus 311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G-~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP 389 (423)
T 4fie_A 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389 (423)
T ss_dssp TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSST
T ss_pred cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCCh
Confidence 999999999999999999999999999999997 666644 43343333333221 1234567899999999999999
Q ss_pred CCCcCHHHHHcCCCCCCcc
Q 002343 783 DLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~ 801 (934)
++|||++|+|+||||....
T Consensus 390 ~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 390 AQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp TTSCCHHHHTTCGGGGGCC
T ss_pred hHCcCHHHHhcCHHhcCCC
Confidence 9999999999999997544
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=451.58 Aligned_cols=247 Identities=27% Similarity=0.382 Sum_probs=193.6
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec----CCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----QDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~ 541 (934)
++.|.+.++||+|+||+||++.. .+++.||||++.+... +...+|+. +++.++|||||++++++.+ ++.
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~~~~ 103 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE-MLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEeeccCCCcE
Confidence 45568888999999999999854 5689999999975432 23455665 8899999999999999875 456
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|||||||+ +|+|.++|.. ...+++.+++.++.||+.||+|
T Consensus 104 ~~lvmEy~~----------gg~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~y 144 (290)
T 3fpq_A 104 IVLVTELMT----------SGTLKTYLKR-----------------------------FKVMKIKVLRSWCRQILKGLQF 144 (290)
T ss_dssp EEEEEECCC----------SCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC----------CCCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999665 4455444432 3457889999999999999999
Q ss_pred HHHCC--CcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 622 LHEIG--LIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 622 LHs~g--IVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
||++| ||||||||+||||+. ++ .+||+|||+|+......
T Consensus 145 lH~~~~~IiHRDlKp~NILl~~~~g--~vKl~DFGla~~~~~~~------------------------------------ 186 (290)
T 3fpq_A 145 LHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRASF------------------------------------ 186 (290)
T ss_dssp HHTSSSCCCCCCCCGGGEEESSTTS--CEEECCTTGGGGCCTTS------------------------------------
T ss_pred HHHCCCCEEecccChhheeEECCCC--CEEEEeCcCCEeCCCCc------------------------------------
Confidence 99998 999999999999964 44 59999999998543211
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhcc--cccccCCCHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRK--DLFLVEHIPEAVDLF 774 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~~--~~~~~~~~~e~~dLI 774 (934)
.++.+||+.|||||++.+ +|+.++|||||||++|||+|| .+||.+.. ......+.... .......++++++||
T Consensus 187 -~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg-~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 187 -AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp -BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHS-SCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred -cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHC-CCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence 122679999999998865 699999999999999999996 77775432 22233333221 223345678999999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.+||+.||++|||++|+|+||||..
T Consensus 264 ~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 264 EGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999999999999964
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=458.62 Aligned_cols=253 Identities=24% Similarity=0.309 Sum_probs=198.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
..|.+.+.||+|+||+||++.. .+|+.||||++..... ..+|+. +++.++|||||++++++.+++.+|||||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~-il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~- 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELV-ACAGLSSPRIVPLYGAVREGPWVNIFMELLE- 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHH-TTTTCCCTTBCCEEEEEEETTEEEEEECCCT-
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--HHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEeccC-
Confidence 4688889999999999999854 5699999999976533 245665 7889999999999999999999999999665
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRD 631 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRD 631 (934)
+|+|.++|.. ...+++.+++.++.||+.||+|||++||||||
T Consensus 134 ---------gg~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD 175 (336)
T 4g3f_A 134 ---------GGSLGQLIKQ-----------------------------MGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175 (336)
T ss_dssp ---------TCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred ---------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 3444444432 34578999999999999999999999999999
Q ss_pred CCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcccc
Q 002343 632 LKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711 (934)
Q Consensus 632 LKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~A 711 (934)
|||+||||+.++. .+||+|||+|+.+..+....+... ....+||+.|||
T Consensus 176 lKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~~~~~~------------------------------~~~~~GT~~YmA 224 (336)
T 4g3f_A 176 VKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT------------------------------GDYIPGTETHMA 224 (336)
T ss_dssp CCGGGEEECTTSC-CEEECCCTTCEEC------------------------------------------CCCCCCGGGCC
T ss_pred cCHHHEEEeCCCC-EEEEeeCCCCeEccCCCcccceec------------------------------CCccccCccccC
Confidence 9999999987653 499999999998765432111100 112579999999
Q ss_pred chhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hH-HHHHHhhccc--ccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ER-DANIVKDRKD--LFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 712 PE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~-~~~i~~~~~~--~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
||++.+..|+.++|||||||++|||+|| .+||.... .. ...+.....+ ..+...++++.+||.+||+.||++|||
T Consensus 225 PE~~~~~~y~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 303 (336)
T 4g3f_A 225 PEVVMGKPCDAKVDIWSSCCMMLHMLNG-CHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS 303 (336)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHCCCCCCcHHHHHHHHHHHHHHHHC-cCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999996 77775432 22 2233333322 234567889999999999999999999
Q ss_pred HHHH-------------HcCCCCCC
Q 002343 788 AQNV-------------LNHPFFWT 799 (934)
Q Consensus 788 a~ev-------------L~HPff~~ 799 (934)
+.|+ |+|||+..
T Consensus 304 a~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 304 AMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp HHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred HHHHHHHHHHHHhhhhhccCCCcCC
Confidence 9998 57999854
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=460.99 Aligned_cols=256 Identities=24% Similarity=0.377 Sum_probs=199.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec-----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----- 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----- 538 (934)
.++++|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|++ +++.++|||||++++++..
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK-ILKHFKHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSSCTT
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHH-HHHhcCCCCcceEeeeeecccccc
Confidence 3567899999999999999999854 6799999999975432 34567876 7889999999999998764
Q ss_pred -CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 -QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 -~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+.+|||||||+++|.+++. +..++++.+++.+++||+.
T Consensus 130 ~~~~~~ivmE~~~g~L~~~i~----------------------------------------~~~~l~~~~~~~~~~qil~ 169 (398)
T 4b99_A 130 EFKSVYVVLDLMESDLHQIIH----------------------------------------SSQPLTLEHVRYFLYQLLR 169 (398)
T ss_dssp TCCCEEEEEECCSEEHHHHHT----------------------------------------SSSCCCHHHHHHHHHHHHH
T ss_pred cCCEEEEEEeCCCCCHHHHHH----------------------------------------hcCCCCHHHHHHHHHHHHH
Confidence 46799999999887766652 1356788999999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++|||||||||+|||++.++. +||+|||+|+.+.........
T Consensus 170 al~ylH~~~iiHRDlKP~NIl~~~~~~--~Ki~DFGla~~~~~~~~~~~~------------------------------ 217 (398)
T 4b99_A 170 GLKYMHSAQVIHRDLKPSNLLVNENCE--LKIGDFGMARGLCTSPAEHQY------------------------------ 217 (398)
T ss_dssp HHHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCC-------CC------------------------------
T ss_pred HHHHHHHCcCcCCCcCccccccCCCCC--EEEeecceeeecccCcccccc------------------------------
Confidence 999999999999999999999976664 999999999876543211110
Q ss_pred ceeecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCC-chhHHHH-HHhhcc---------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGE-SFERDAN-IVKDRK--------------- 759 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~-i~~~~~--------------- 759 (934)
..+..+||+.|||||++.+.. |+.++||||+|||+|||++| .+||.. ....... +.....
T Consensus 218 -~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G-~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~ 295 (398)
T 4b99_A 218 -FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR-RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295 (398)
T ss_dssp -CCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT-SCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CH
T ss_pred -ccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHC-CCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhh
Confidence 112368999999999998764 69999999999999999996 667654 3322222 211100
Q ss_pred --------cc-------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 --------DL-------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 --------~~-------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. ..+..+++++|||.+||+.||++||||+|+|+||||...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 296 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp HHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred hhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 00 012356899999999999999999999999999999754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-50 Score=442.33 Aligned_cols=263 Identities=24% Similarity=0.410 Sum_probs=184.5
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC--------
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD-------- 540 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-------- 540 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK-ALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 478899999999999999854 5799999999975443 23556776 888999999999999987543
Q ss_pred ----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 541 ----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 541 ----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
++|||||||.+ |+|.+++..... ....++..++.++.||+
T Consensus 85 ~~~~~l~ivmE~~~g----------g~L~~~l~~~~~--------------------------~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 85 SPKVYLYIQMQLCRK----------ENLKDWMNGRCT--------------------------IEERERSVCLHIFLQIA 128 (299)
T ss_dssp --CEEEEEEEECCCS----------CCHHHHHHTCCS--------------------------GGGSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEEecCCC----------CcHHHHHHhcCC--------------------------CChhHHHHHHHHHHHHH
Confidence 48999997763 444444432110 01124556889999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++|||||||||+||||+.++. +||+|||+|+.+..+....+..... ..
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~--vKl~DFGla~~~~~~~~~~~~~~~~-----------------------~~ 183 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPM-----------------------PA 183 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCCCC-----------------------------------------
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCc--EEEccCccceecCCCcccccccccc-----------------------cc
Confidence 9999999999999999999999977664 9999999999876543321110000 00
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHH---hhcccccccCCCHHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIV---KDRKDLFLVEHIPEAVDL 773 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~---~~~~~~~~~~~~~e~~dL 773 (934)
....+..+||+.|||||++.+..|+.++|||||||++|||++ ||....+....+. ....+......++++.+|
T Consensus 184 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~----Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 259 (299)
T 4g31_A 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM 259 (299)
T ss_dssp --------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHH
T ss_pred ccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc----CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHH
Confidence 011233679999999999999999999999999999999996 6665443322221 112122223345788999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
|.+||+.||++|||+.|+|+||||.+.+.
T Consensus 260 i~~~L~~dP~~Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 260 VQDMLSPSPMERPEAINIIENAVFEDLDF 288 (299)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred HHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence 99999999999999999999999976543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=443.09 Aligned_cols=262 Identities=24% Similarity=0.336 Sum_probs=192.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.+.+.++||+|+||+||++.. .+++.||||++..... +...+|+. +++.++|||||+++|+|.+.+.+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~-il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE-LLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEE
Confidence 4577889999999999999854 3578999999975443 23456665 889999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||+ +|+|.++|+......... .........++++.+++.|+.||++||+|||
T Consensus 120 lV~Ey~~----------~G~L~~~l~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 175 (329)
T 4aoj_A 120 MVFEYMR----------HGDLNRFLRSHGPDAKLL--------------AGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175 (329)
T ss_dssp EEEECCT----------TCBHHHHHHTSSCC-------------------------CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCC----------CCcHHHHHHhcCcccccc--------------cccccccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999655 455555554332211100 0001112456899999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++||||||||+||||+.++ .+||+|||+|+.+........ .+..
T Consensus 176 ~~~iiHRDLKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~---------------------------------~~~~ 220 (329)
T 4aoj_A 176 GLHFVHRDLATRNCLVGQGL--VVKIGDFGMSRDIYSTDYYRV---------------------------------GGRT 220 (329)
T ss_dssp HTTCCCSCCCGGGEEEETTT--EEEECCCC-------------------------------------------------C
T ss_pred cCCeecccccHhhEEECCCC--cEEEcccccceeccCCCccee---------------------------------cCcc
Confidence 99999999999999997654 699999999997654322111 1125
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHH-HHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+||+.|||||++.+..|+.++|||||||+||||+|.|++||.... ..... +........+...++++.+||.+||+.|
T Consensus 221 ~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~d 300 (329)
T 4aoj_A 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 300 (329)
T ss_dssp CCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSS
T ss_pred cccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcC
Confidence 699999999999999999999999999999999996677886543 33333 3333334445567899999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||++||+++
T Consensus 301 P~~RPs~~ei~~~ 313 (329)
T 4aoj_A 301 PQQRHSIKDVHAR 313 (329)
T ss_dssp TTTSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999864
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-50 Score=439.71 Aligned_cols=258 Identities=24% Similarity=0.366 Sum_probs=196.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++|||||+++|+|.+++.+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~-il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE-LLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHH-HHHhCCCCCCccEEEEEeeCCEEE
Confidence 45888999999999999998543 478999999975443 23456665 889999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||+ +|+|.++|+......... ........+++.+++.|+.||++||+|||
T Consensus 92 lV~Ey~~----------~G~L~~~l~~~~~~~~~~----------------~~~~~~~~l~~~~~~~i~~qia~gl~yLH 145 (299)
T 4asz_A 92 MVFEYMK----------HGDLNKFLRAHGPDAVLM----------------AEGNPPTELTQSQMLHIAQQIAAGMVYLA 145 (299)
T ss_dssp EEEECCT----------TCBHHHHHHHTSHHHHHC--------------------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCC----------CCcHHHHHHhcCcccccc----------------cccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 455555554321100000 00011346899999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++||||||||+||||+.++ .+||+|||+|+........... ...
T Consensus 146 ~~~iiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~---------------------------------~~~ 190 (299)
T 4asz_A 146 SQHFVHRDLATRNCLVGENL--LVKIGDFGMSRDVYSTDYYRVG---------------------------------GHT 190 (299)
T ss_dssp HTTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCEEET---------------------------------TTE
T ss_pred hCCcccCccCHhhEEECCCC--cEEECCcccceecCCCCceeec---------------------------------Cce
Confidence 99999999999999996654 5999999999876543221110 013
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+||+.|||||++.++.|+.++|||||||+||||+|.|++||..... .... +........+...++++.+||.+||+.|
T Consensus 191 ~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~d 270 (299)
T 4asz_A 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQRE 270 (299)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999999999966788865433 3333 3333333445567889999999999999
Q ss_pred CCCCcCHHHHH
Q 002343 782 PDLRPKAQNVL 792 (934)
Q Consensus 782 P~~RPTa~evL 792 (934)
|++|||+++|+
T Consensus 271 P~~RPs~~~i~ 281 (299)
T 4asz_A 271 PHMRKNIKGIH 281 (299)
T ss_dssp GGGSCCHHHHH
T ss_pred hhHCcCHHHHH
Confidence 99999999994
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=437.46 Aligned_cols=262 Identities=21% Similarity=0.313 Sum_probs=197.8
Q ss_pred eEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.+.++||+|+||+||+|.. .+++.||||++..... +...+|+. +++.++|||||+++|+|.+++.+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~-il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM-LRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHH-HHHhCCCCCCCCcceEEEECCEEE
Confidence 456788999999999999754 3578999999965432 34455665 889999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||+ +|+|.++|.......... ..+........+++.+++.|+.||++||+|||
T Consensus 106 lV~Ey~~----------~G~L~~~L~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 162 (308)
T 4gt4_A 106 MIFSYCS----------HGDLHEFLVMRSPHSDVG-------------STDDDRTVKSALEPPDFVHLVAQIAAGMEYLS 162 (308)
T ss_dssp EEEECCS----------SCBHHHHHHTTCSSCCCC------------------CCEECCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCC----------CCcHHHHHHhhCcccccc-------------ccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999554 455555554322111000 00000011356899999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++||||||||+||||+.++ .+||+|||+|+.+........ .+..
T Consensus 163 ~~~iiHRDLK~~NILl~~~~--~~Ki~DFGlar~~~~~~~~~~---------------------------------~~~~ 207 (308)
T 4gt4_A 163 SHHVVHKDLATRNVLVYDKL--NVKISDLGLFREVYAADYYKL---------------------------------LGNS 207 (308)
T ss_dssp HTTCCCSCCSGGGEEECGGG--CEEECCSCCBCGGGGGGCBCS---------------------------------SSSS
T ss_pred hCCCCCCCccccceEECCCC--CEEECCcccceeccCCCceeE---------------------------------eccc
Confidence 99999999999999996654 599999999987654322111 1125
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-cccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK-DLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+||+.|||||++.++.|+.++|||||||+||||+|+|.+||..... .....+.... ...+...++++.+||.+||+.|
T Consensus 208 ~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~d 287 (308)
T 4gt4_A 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEF 287 (308)
T ss_dssp CBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCC
Confidence 7999999999999999999999999999999999966888866433 3333333332 3344567789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||+.||+++
T Consensus 288 P~~RPs~~ei~~~ 300 (308)
T 4gt4_A 288 PSRRPRFKDIHSR 300 (308)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999865
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=441.41 Aligned_cols=281 Identities=25% Similarity=0.308 Sum_probs=195.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.++|.+.+.||+|+||+||++... +++.||||++.+... ....+|++.+....+|||||++++++.+.+++||
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 45678999999999999999998543 468999999876544 4567788755445589999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||++ |+|.+++ +.+++.+++.+++||+.||+|||+
T Consensus 98 vmE~~~g----------~~L~~~~--------------------------------~~l~~~~~~~~~~qll~al~ylH~ 135 (361)
T 4f9c_A 98 AMPYLEH----------ESFLDIL--------------------------------NSLSFQEVREYMLNLFKALKRIHQ 135 (361)
T ss_dssp EEECCCC----------CCHHHHH--------------------------------TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCc----------ccHHHHH--------------------------------cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9997763 3333332 235788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.+. ..+||+|||+|+................... .......+. .........+..+
T Consensus 136 ~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~ 207 (361)
T 4f9c_A 136 FGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTHDTKIELLKFVQSEAQQ------ERCSQNKCS-ICLSRRQQVAPRA 207 (361)
T ss_dssp TTEECSCCSGGGEEEETTT-TEEEECCCTTCEECTTCSCGGGGGC---------------------------------CC
T ss_pred CCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccCCccccccccccccccc------ccccccccc-ccccccccccccc
Confidence 9999999999999997653 2599999999987654332111000000000 000000000 0000111234468
Q ss_pred CCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhh------------------------
Q 002343 705 GSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKD------------------------ 757 (934)
Q Consensus 705 GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~------------------------ 757 (934)
||+.|||||++.+. .|+.++||||+|||+|||++|..|+|....+. ...+...
T Consensus 208 GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p 287 (361)
T 4f9c_A 208 GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVP 287 (361)
T ss_dssp CCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCC
T ss_pred cCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCc
Confidence 99999999999876 48999999999999999999744444433211 1111100
Q ss_pred -------------c----------------ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 -------------R----------------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 -------------~----------------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
. ........+++++|||.+||+.||++||||+|+|+||||.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 288 AQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp CCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred chhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0 000112356899999999999999999999999999999653
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=427.26 Aligned_cols=243 Identities=23% Similarity=0.330 Sum_probs=181.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.+.+.++||+|+||+||++.. ...||||+++.... +...+|+. +++.++|||||+++|++.+ +.+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~--~~~vAvK~~~~~~~~~~~~~~f~~E~~-il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVA-VLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEES--SSEEEEEECCCSSCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEE--CCcEEEEEEEecCCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3456788999999999999753 23699999864322 23445655 8899999999999998865 56899999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||+ +|+|.++|+.. ...+++.+++.|+.||+.||+|||+++|
T Consensus 112 y~~----------gGsL~~~l~~~----------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~I 153 (307)
T 3omv_A 112 WCE----------GSSLYKHLHVQ----------------------------ETKFQMFQLIDIARQTAQGMDYLHAKNI 153 (307)
T ss_dssp CCS----------SCBHHHHHHTS----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCC----------CCCHHHHHhhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 665 45555555321 2457888999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+||||+.+ ..+||+|||+|+.......... .+..+||+
T Consensus 154 iHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~~~~~~~---------------------------------~~~~~GT~ 198 (307)
T 3omv_A 154 IHRDMKSNNIFLHEG--LTVKIGDFGLATVKSRWSGSQQ---------------------------------VEQPTGSV 198 (307)
T ss_dssp BCSCCCSSSEEEETT--EEEEECCCSSCBC---------------------------------------------CCCCT
T ss_pred cCCccCHHHEEECCC--CcEEEeeccCceecccCCccee---------------------------------ecccccCC
Confidence 999999999999765 4699999999987654221110 11257999
Q ss_pred ccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhccc-----ccccCCCHHHHHHHHHc
Q 002343 708 GWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKD-----LFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 708 ~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~~~-----~~~~~~~~e~~dLI~~~ 777 (934)
.|||||++.+ +.|+.++|||||||+||||+|| .+||.... ......+..... ..+...++++.+||.+|
T Consensus 199 ~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~c 277 (307)
T 3omv_A 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG-ELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADC 277 (307)
T ss_dssp TSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHS-SCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHH
T ss_pred CccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHC-CCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHH
Confidence 9999999964 4589999999999999999995 77886532 222333332211 12334578999999999
Q ss_pred ccCCCCCCcCHHHHHc
Q 002343 778 LDPNPDLRPKAQNVLN 793 (934)
Q Consensus 778 L~~DP~~RPTa~evL~ 793 (934)
|+.||++|||+.||++
T Consensus 278 l~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 278 VKKVKEERPLFPQILS 293 (307)
T ss_dssp TCSSSTTSCCHHHHHH
T ss_pred cCCCHhHCcCHHHHHH
Confidence 9999999999998753
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-48 Score=460.69 Aligned_cols=255 Identities=26% Similarity=0.382 Sum_probs=204.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hh-HHHHH--HHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HD-VALKE--IQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~-~~~~E--i~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .. ...+| +..+++.++|||||++++++++.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5699999999999999999854 569999999997532 11 22222 234566789999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||. +|+|.++|.. ...+++.+++.|+.||+.||+|||
T Consensus 269 lVmEy~~----------GGdL~~~l~~-----------------------------~~~l~E~~a~~y~~qIl~aL~yLH 309 (689)
T 3v5w_A 269 FILDLMN----------GGDLHYHLSQ-----------------------------HGVFSEADMRFYAAEIILGLEHMH 309 (689)
T ss_dssp EEECCCC----------SCBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999665 4555555432 356789999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+||||+.++. +||+|||+|+.+..... .+.
T Consensus 310 ~~gIiHRDLKPeNILld~~G~--vKL~DFGlA~~~~~~~~-------------------------------------~t~ 350 (689)
T 3v5w_A 310 NRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKKKP-------------------------------------HAS 350 (689)
T ss_dssp TTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSSCCC-------------------------------------CSC
T ss_pred HCCccccCCchHHeEEeCCCC--EEecccceeeecCCCCC-------------------------------------CCc
Confidence 999999999999999977765 99999999987654321 125
Q ss_pred CCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch----hHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF----ERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
+||+.|||||++.+ ..|+.++|||||||+||||++| .+||.... ......+.......+...++++++||.+||
T Consensus 351 ~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG-~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL 429 (689)
T 3v5w_A 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429 (689)
T ss_dssp CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS-SCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred cCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHc
Confidence 79999999999975 5799999999999999999996 77775422 122223333444456677899999999999
Q ss_pred cCCCCCCcC-----HHHHHcCCCCCCccchhhh
Q 002343 779 DPNPDLRPK-----AQNVLNHPFFWTADTRLSF 806 (934)
Q Consensus 779 ~~DP~~RPT-----a~evL~HPff~~~~~~~~f 806 (934)
+.||++|++ ++||++||||.+.++..-.
T Consensus 430 ~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~ 462 (689)
T 3v5w_A 430 QRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 462 (689)
T ss_dssp CSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHH
T ss_pred cCCHhHCCCCCCCCHHHHhcCccccCCCHHHHH
Confidence 999999998 7999999999998876543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=428.54 Aligned_cols=265 Identities=22% Similarity=0.315 Sum_probs=197.7
Q ss_pred cceEEEeeeecccCcEEEEEEEEec------CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CC
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QD 540 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~------g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~ 540 (934)
.+.|.+.+.||+|+||+||+|.... ++.||||++..... +...+|+..+.+..+|||||+++|+|.+ ++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 3568899999999999999985442 46899999976543 2355677644444456999999999876 46
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|||||||+ +|+|.++|+......... ....+......+++.+++.++.|||+||+
T Consensus 143 ~~~iV~Ey~~----------~G~L~~~L~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~qia~gl~ 199 (353)
T 4ase_A 143 PLMVIVEFCK----------FGNLSTYLRSKRNEFVPY-------------KVAPEDLYKDFLTLEHLICYSFQVAKGME 199 (353)
T ss_dssp CCEEEEECCT----------TEEHHHHHHHTGGGBCCC--------------------CTTCBCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCC----------CCCHHHHHHhcccccccc-------------cccchhhccccCCHHHHHHHHHHHHHHHH
Confidence 7999999665 455555554322110000 00000111345789999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||+++||||||||+|||++.++ .+||+|||+|+.+..+......
T Consensus 200 yLH~~~iiHRDLK~~NILl~~~~--~vKi~DFGlar~~~~~~~~~~~--------------------------------- 244 (353)
T 4ase_A 200 FLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRK--------------------------------- 244 (353)
T ss_dssp HHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTTCTTSEEE---------------------------------
T ss_pred hHhhCCeecCccCccceeeCCCC--CEEECcchhhhhcccCCCceee---------------------------------
Confidence 99999999999999999997665 5999999999977554322111
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhc-ccccccCCCHHHHHHHHHc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDR-KDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~ 777 (934)
+..+||+.|||||++.+..|+.++|||||||+||||+|.|.+||.... +.....+... ....+...++++.+||.+|
T Consensus 245 ~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c 324 (353)
T 4ase_A 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 324 (353)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence 124699999999999999999999999999999999996688886532 2233333333 3334556788999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||++|||+.||++|
T Consensus 325 ~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 325 WHGEPSQRPTFSELVEH 341 (353)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred cCcChhHCcCHHHHHHH
Confidence 99999999999999987
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=455.05 Aligned_cols=254 Identities=23% Similarity=0.378 Sum_probs=204.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +|+.++|||||++++++.+++.+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ-TMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH-HHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHH-HHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 5689999999999999999854 5799999999976543 34566776 78899999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.++|... ...+++.+++.+++||+.||+|||++|||
T Consensus 236 ~~g----------g~L~~~i~~~----------------------------~~~l~e~~~~~~~~qi~~al~ylH~~~ii 277 (573)
T 3uto_A 236 MSG----------GELFEKVADE----------------------------HNKMSEDEAVEYMRQVCKGLCHMHENNYV 277 (573)
T ss_dssp CCC----------CBHHHHHTCT----------------------------TSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cCC----------CcHHHHHHHh----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 653 4444443211 24567889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.+....+||+|||+|+.+..... ....+||+.
T Consensus 278 HRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~------------------------------------~~~~~GT~~ 321 (573)
T 3uto_A 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS------------------------------------VKVTTGTAE 321 (573)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE------------------------------------EEEECSSGG
T ss_pred eccCChhhccccCCCCCCEEEeeccceeEccCCCc------------------------------------eeeeEECcc
Confidence 99999999999865444699999999998754322 122579999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHH-HHhhcc---cccccCCCHHHHHHHHHcccCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDAN-IVKDRK---DLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~-i~~~~~---~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|||||++.+..|+.++|||||||+||||++| .+||... ...... +..... .......+++++|||.+||+.||+
T Consensus 322 y~APEv~~~~~y~~~~DiWSlGvilyeml~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~ 400 (573)
T 3uto_A 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG-LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPN 400 (573)
T ss_dssp GCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGG
T ss_pred ccCHHHhCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChh
Confidence 9999999999999999999999999999996 6677544 333333 333222 122345678999999999999999
Q ss_pred CCcCHHHHHcCCCCCCccc
Q 002343 784 LRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~~ 802 (934)
+|||+.|+|+||||.....
T Consensus 401 ~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 401 TRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp GSCCHHHHHHSTTTSCCCC
T ss_pred HCcCHHHHhcCcCcCCCCC
Confidence 9999999999999976543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-47 Score=417.43 Aligned_cols=248 Identities=21% Similarity=0.318 Sum_probs=182.1
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHH-HHHHhCCCCceeEEEEEEecCC----eEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ-NLIASDQHPNIVRWYGVESDQD----FVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~-~ll~~l~HpNIV~l~g~~~~~~----~~yLV 545 (934)
|.+.|.+.+.||+|+||+||++. .+|+.||||++.........+|.+ ..+..++|||||+++|++.+++ .+|||
T Consensus 1 Iar~i~L~~~iG~G~fG~Vy~~~-~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 1 IARTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEE-ETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred CCcEEEEEEEEeeCCCeEEEEEE-ECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 35678899999999999999974 589999999997665554444433 1345789999999999998654 68999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+ +|+|.++|+ ..+++++++.+++.|++.||+|||++
T Consensus 80 ~Ey~~----------~gsL~~~l~------------------------------~~~l~~~~~~~i~~~ia~gl~ylH~~ 119 (303)
T 3hmm_A 80 SDYHE----------HGSLFDYLN------------------------------RYTVTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp EECCT----------TCBHHHHHH------------------------------HCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCCC----------CCcHHHHHH------------------------------hCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99554 556655553 23467888999999999999999987
Q ss_pred --------CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 626 --------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 626 --------gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
+||||||||+||||+.++ .+||+|||+|+............
T Consensus 120 ~~~~~~~~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~~~~~----------------------------- 168 (303)
T 3hmm_A 120 IVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIA----------------------------- 168 (303)
T ss_dssp BCSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEESCC-----------------------------
T ss_pred hhhccCCCCEeeccCCcccEEECCCC--CEEEEeCCCCccccCCCCceeee-----------------------------
Confidence 999999999999996665 59999999999876543221111
Q ss_pred ceeecCCCCCccccchhcccC------CCcccccccchhhhhHHhhcCCCCCCC----------Cc------hhHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQG------RQTRAIDLFSLGCILFFCITGGKHPYG----------ES------FERDANIV 755 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~------~~t~ksDIWSLGvILyeLltGg~~Pf~----------~~------~~~~~~i~ 755 (934)
....+||+.|||||++.+. .++.++|||||||+||||+|| .+|++ .. .......+
T Consensus 169 --~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 245 (303)
T 3hmm_A 169 --PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR-CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245 (303)
T ss_dssp -------CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT-BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH
T ss_pred --cccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHC-CCCCCccccccccchhcccccchHHHHHHHH
Confidence 0125799999999999764 468899999999999999996 44332 11 11112222
Q ss_pred hhc-ccc-ccc-----CCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 756 KDR-KDL-FLV-----EHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 756 ~~~-~~~-~~~-----~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
... ... .+. +...++.+|+.+||+.||++|||+.||++
T Consensus 246 ~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 111 111 111 11246789999999999999999999985
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=393.47 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=202.2
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
-+.|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVR-IMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 35688999999999999999855 6799999999975432 23456665 78889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 93 ~e~~~----------~~~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~al~~lH~~ 133 (328)
T 3fe3_A 93 MEYAS----------GGEVFDYLVA-----------------------------HGRMKEKEARSKFRQIVSAVQYCHQK 133 (328)
T ss_dssp ECCCT----------TCBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EECCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99664 3444444321 34578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+|+........ +..+|
T Consensus 134 ~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~------------------------------------~~~~g 175 (328)
T 3fe3_A 134 RIVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKL------------------------------------DAFCG 175 (328)
T ss_dssp TCCCSCCCGGGEEECTTSC--EEECSTTCCGGGSSSCGG------------------------------------GTTSS
T ss_pred CEeccCCCHHHEEEcCCCC--EEEeeccCceecCCCCcc------------------------------------ccccC
Confidence 9999999999999976654 999999999876543211 12579
Q ss_pred CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|+.|+|||++.+..+ +.++|||||||++|+|++| .+||... .......+.......+...++++.+||.+||+.||.
T Consensus 176 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~ 254 (328)
T 3fe3_A 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-SLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPI 254 (328)
T ss_dssp SGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTT
T ss_pred CcceeCcccccCCCcCCchhhhhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChh
Confidence 999999999998887 4899999999999999996 6677544 333334444444444556789999999999999999
Q ss_pred CCcCHHHHHcCCCCCCcc
Q 002343 784 LRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~ 801 (934)
+|||++|+++||||....
T Consensus 255 ~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 255 KRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp TSCCHHHHTTCTTTTTTC
T ss_pred HCcCHHHHhcCHhhcCCC
Confidence 999999999999997543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=393.70 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=201.2
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.+.++|.+.+.||+|+||+||++...+|+.||||++..... ....+|+. +++.++|||||++++++.+++..|
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREIS-LLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHH-HHHHCCCTTBCCEEEEECCSSCEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHH-HHHHcCCCCEeeeeeEEccCCEEE
Confidence 556788999999999999999999877899999999864332 23456665 788899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||+++|.+++... ..++++.+++.++.||+.||+|||
T Consensus 96 lv~e~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~~l~~LH 136 (311)
T 3niz_A 96 LVFEFMEKDLKKVLDEN---------------------------------------KTGLQDSQIKIYLYQLLRGVAHCH 136 (311)
T ss_dssp EEEECCSEEHHHHHHTC---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHhc---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999988776655211 234788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++. +||+|||+|+......... +..
T Consensus 137 ~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~-----------------------------------~~~ 179 (311)
T 3niz_A 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSY-----------------------------------THE 179 (311)
T ss_dssp HTTEECCCCCGGGEEECTTCC--EEECCCTTCEETTSCCC--------------------------------------CC
T ss_pred HCCcccCCCchHhEEECCCCC--EEEccCcCceecCCCcccc-----------------------------------cCC
Confidence 999999999999999976664 9999999998764322111 114
Q ss_pred CCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHh---hccc-----------------
Q 002343 704 YGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVK---DRKD----------------- 760 (934)
Q Consensus 704 ~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~---~~~~----------------- 760 (934)
+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .. ..+.. ....
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence 68999999999976 4689999999999999999996 677754322 11 11111 0000
Q ss_pred ---------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 761 ---------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 761 ---------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
......++++.+||.+||+.||++|||++|+|+||||.+.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence 011234678999999999999999999999999999987654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=396.96 Aligned_cols=254 Identities=25% Similarity=0.353 Sum_probs=204.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++||||+++++++.+.+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR-VLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHH-HHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 4688899999999999999855 469999999996532 233455554 77889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|..++.. ...+++.+++.++.||+.||+|||++
T Consensus 84 ~E~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (337)
T 1o6l_A 84 MEYANG----------GELFFHLSR-----------------------------ERVFTEERARFYGAEIVSALEYLHSR 124 (337)
T ss_dssp EECCTT----------CBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 996653 444444321 34568889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+|+........ ....+|
T Consensus 125 ~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~-----------------------------------~~~~~g 167 (337)
T 1o6l_A 125 DVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGAT-----------------------------------MKTFCG 167 (337)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCTTCC-----------------------------------BCCCEE
T ss_pred CeecCcCCHHHEEECCCCC--EEEeeccchhhcccCCCc-----------------------------------cccccc
Confidence 9999999999999977664 999999999864332111 012579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||. .........+.......+...++++.+||.+||+.||++
T Consensus 168 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~ 246 (337)
T 1o6l_A 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred ChhhCChhhhcCCCCCchhhcccchhHHHHHhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 9999999999999999999999999999999997 55654 444444444444444455667899999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccchh
Q 002343 785 RP-----KAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~~ 804 (934)
|| +++|+++||||.+.++..
T Consensus 247 R~g~~~~~~~ei~~h~~f~~~~~~~ 271 (337)
T 1o6l_A 247 RLGGGPSDAKEVMEHRFFLSINWQD 271 (337)
T ss_dssp STTCSTTTHHHHHTSGGGTTCCHHH
T ss_pred hcCCCCCCHHHHHcCCCcCCCCHHH
Confidence 99 899999999998877653
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=399.42 Aligned_cols=257 Identities=21% Similarity=0.330 Sum_probs=204.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---------hHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---------DVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. ++..++|||||++++++.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS-ILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHTTCCCTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHH-HHHhCCCcCCCcEEEEEEe
Confidence 45667899999999999999999855 4689999999975432 34556665 7888999999999999999
Q ss_pred CCeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+.+|+|||||. ++|.+++ .. ...+++.+++.++.||+.
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l-----------~~-----------------------------~~~l~~~~~~~i~~qi~~ 126 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFL-----------AQ-----------------------------KESLSEEEATSFIKQILD 126 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHH-----------TT-----------------------------CSCCBHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHH
Confidence 999999999775 3444443 21 235678899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCC--ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~--~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
||+|||++||+||||||+|||++.++. ..+||+|||+++.+......
T Consensus 127 aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~------------------------------- 175 (361)
T 2yab_A 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF------------------------------- 175 (361)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCC-------------------------------
T ss_pred HHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCcc-------------------------------
Confidence 999999999999999999999976541 25999999999876543211
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccc----cccCCCHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDL----FLVEHIPEA 770 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~----~~~~~~~e~ 770 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||.. ........+...... .....++++
T Consensus 176 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 249 (361)
T 2yab_A 176 -----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249 (361)
T ss_dssp -----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHH
T ss_pred -----ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHH
Confidence 115699999999999999999999999999999999997 556644 333333322222211 124567899
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
++||.+||..||++|||+.|+++||||...+..
T Consensus 250 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 282 (361)
T 2yab_A 250 KDFIRKLLVKETRKRLTIQEALRHPWITPVDTQ 282 (361)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSTTTSCSSHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCcCcCCCchh
Confidence 999999999999999999999999999876554
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-44 Score=401.70 Aligned_cols=255 Identities=24% Similarity=0.353 Sum_probs=200.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|...+....+|||||++++++.+.+.+|||
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 5688999999999999999855 468999999997542 233455655333344899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|..++.. ...+++.+++.++.||+.||+|||++
T Consensus 103 ~E~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 143 (353)
T 3txo_A 103 MEFVNG----------GDLMFHIQK-----------------------------SRRFDEARARFYAAEIISALMFLHDK 143 (353)
T ss_dssp EECCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCC----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 996653 444444322 34578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+........ ....+|
T Consensus 144 givHrDlkp~NILl~~~g~--ikL~DFG~a~~~~~~~~~-----------------------------------~~~~~g 186 (353)
T 3txo_A 144 GIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGICNGVT-----------------------------------TATFCG 186 (353)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCC--------------------------------------------C
T ss_pred CCcccCCCHHHEEECCCCC--EEEccccceeecccCCcc-----------------------------------ccccCC
Confidence 9999999999999977664 999999999854322110 112579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+......++...++++.+||.+||+.||++
T Consensus 187 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~ 265 (353)
T 3txo_A 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTM 265 (353)
T ss_dssp CGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CcCeEChhhcCCCCcCCccCCCcchHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHH
Confidence 9999999999998999999999999999999996 666654 33334444444444455667899999999999999999
Q ss_pred CcCH------HHHHcCCCCCCccchh
Q 002343 785 RPKA------QNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RPTa------~evL~HPff~~~~~~~ 804 (934)
||++ +++++||||.+.++..
T Consensus 266 R~~~~~~~~~~~il~hp~f~~~~w~~ 291 (353)
T 3txo_A 266 RLGSLTQGGEHAILRHPFFKEIDWAQ 291 (353)
T ss_dssp STTSGGGTCTHHHHTSGGGTTCCHHH
T ss_pred ccCCcccCCHHHHhhCCcccCCCHHH
Confidence 9998 8999999998877653
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=386.68 Aligned_cols=250 Identities=26% Similarity=0.376 Sum_probs=198.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+++..|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHH-HHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 3588899999999999999855 4689999999975432 34456665 788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||++++.+.+... ...+++.+++.++.||+.||+|||++|
T Consensus 81 e~~~~~l~~~~~~~---------------------------------------~~~l~~~~~~~~~~ql~~~l~~lH~~~ 121 (292)
T 3o0g_A 81 EFCDQDLKKYFDSC---------------------------------------NGDLDPEIVKSFLFQLLKGLGFCHSRN 121 (292)
T ss_dssp ECCSEEHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCHHHHHHhC---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99988766654221 245678899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++. +||+|||+|+.+....... +...||
T Consensus 122 ivH~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~t 164 (292)
T 3o0g_A 122 VLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPVRCY-----------------------------------SAEVVT 164 (292)
T ss_dssp EECCCCSGGGEEECTTSC--EEECCCTTCEECCSCCSCC-----------------------------------CSCCSC
T ss_pred eecCCCCHHHEEEcCCCC--EEEeecccceecCCccccc-----------------------------------cCCccc
Confidence 999999999999976654 9999999998764332111 114689
Q ss_pred CccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhccc-----------------------
Q 002343 707 SGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKD----------------------- 760 (934)
Q Consensus 707 ~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~----------------------- 760 (934)
+.|+|||++.+.. ++.++|||||||++|+|++|+.+||....... . .+......
T Consensus 165 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (292)
T 3o0g_A 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA 244 (292)
T ss_dssp GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCT
T ss_pred cCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccC
Confidence 9999999998766 79999999999999999998887776543222 1 11110000
Q ss_pred -----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 761 -----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 761 -----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
......++++++||.+||+.||++|||++|+|+||||.+
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence 011234678999999999999999999999999999965
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=401.43 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=202.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+... +...+|...+....+|||||++++++.+.+.+|||
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 5688899999999999999865 4588999999975421 23456666455556999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|..++.. ...+++..++.++.||+.||+|||++
T Consensus 132 ~E~~~g----------g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~ 172 (396)
T 4dc2_A 132 IEYVNG----------GDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNYLHER 172 (396)
T ss_dssp EECCTT----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCC----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 996653 444444322 34578899999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+........ ....+|
T Consensus 173 givHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~~~~-----------------------------------~~~~~g 215 (396)
T 4dc2_A 173 GIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDT-----------------------------------TSTFCG 215 (396)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC-----------------------------------BCCCCB
T ss_pred CEEeccCCHHHEEECCCCC--EEEeecceeeecccCCCc-----------------------------------cccccC
Confidence 9999999999999977664 999999999853322111 112579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc----------hhHHHHHHhhcccccccCCCHHHHHHHH
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----------FERDANIVKDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----------~~~~~~i~~~~~~~~~~~~~~e~~dLI~ 775 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||... .......+.......+...++++++||.
T Consensus 216 t~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G-~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 294 (396)
T 4dc2_A 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG-RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK 294 (396)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CcccCCchhhcCCCCChHHHHHHHHHHHHHHHhC-CCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999999996 7777421 1112233334444455667899999999
Q ss_pred HcccCCCCCCcCH------HHHHcCCCCCCccchh
Q 002343 776 RLLDPNPDLRPKA------QNVLNHPFFWTADTRL 804 (934)
Q Consensus 776 ~~L~~DP~~RPTa------~evL~HPff~~~~~~~ 804 (934)
+||+.||++||++ +|+++||||.+.++..
T Consensus 295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~ 329 (396)
T 4dc2_A 295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329 (396)
T ss_dssp HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHH
T ss_pred HHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999999999995 7999999998877653
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=390.00 Aligned_cols=250 Identities=23% Similarity=0.348 Sum_probs=201.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|. .+++.++||||+++++++.+.+.+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER-LMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHH-HHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHH-HHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 4588899999999999999855 469999999997532 12333444 488899999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 85 ~e~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 125 (318)
T 1fot_A 85 MDYIEG----------GELFSLLRK-----------------------------SQRFPNPVAKFYAAEVCLALEYLHSK 125 (318)
T ss_dssp ECCCCS----------CBHHHHHHH-----------------------------TSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCCC----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 997653 444444321 24467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+|+...... ...+|
T Consensus 126 ~ivHrDlkp~NIll~~~g~--~kL~Dfg~a~~~~~~~--------------------------------------~~~~g 165 (318)
T 1fot_A 126 DIIYRDLKPENILLDKNGH--IKITDFGFAKYVPDVT--------------------------------------YTLCG 165 (318)
T ss_dssp TEECCCCCGGGEEECTTSC--EEECCCSSCEECSSCB--------------------------------------CCCCS
T ss_pred CccccCCChheEEEcCCCC--EEEeecCcceecCCcc--------------------------------------ccccC
Confidence 9999999999999976664 9999999998654311 01569
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+......++...++++.+||.+||+.||++
T Consensus 166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~ 244 (318)
T 1fot_A 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG-YTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQ 244 (318)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTT
T ss_pred CccccCHhHhcCCCCCcccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHH
Confidence 9999999999999999999999999999999997 566644 33333333333334445567889999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccch
Q 002343 785 RP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~ 803 (934)
|| +++++++||||.+.++.
T Consensus 245 R~~~~~~~~~~i~~hp~f~~~~~~ 268 (318)
T 1fot_A 245 RLGNLQNGTEDVKNHPWFKEVVWE 268 (318)
T ss_dssp CTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred cCCCcCCCHHHHhcCccccCCCHH
Confidence 99 99999999999887664
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=395.87 Aligned_cols=254 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+....|...+....+||||+++++++.+.+.+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 5688899999999999999865 468999999997532 234456666444456999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 97 ~E~~~----------gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 137 (345)
T 1xjd_A 97 MEYLN----------GGDLMYHIQS-----------------------------CHKFDLSRATFYAAEIILGLQFLHSK 137 (345)
T ss_dssp EECCT----------TCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99665 3444444322 24567889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+........ ....+|
T Consensus 138 ~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~-----------------------------------~~~~~g 180 (345)
T 1xjd_A 138 GIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGDAK-----------------------------------TNTFCG 180 (345)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC-----------------------------------BCCCCS
T ss_pred CeEeCCCChhhEEECCCCC--EEEeEChhhhhcccCCCc-----------------------------------ccCCCC
Confidence 9999999999999976664 999999999864322111 012579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+.......+...++++++||.+||+.||++
T Consensus 181 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~ 259 (345)
T 1xjd_A 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG-QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEK 259 (345)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred CcccCChhhhcCCCCCChhhhHHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhH
Confidence 9999999999999999999999999999999996 666654 33333444444444455567899999999999999999
Q ss_pred CcCHH-HHHcCCCCCCccch
Q 002343 785 RPKAQ-NVLNHPFFWTADTR 803 (934)
Q Consensus 785 RPTa~-evL~HPff~~~~~~ 803 (934)
||++. ++++||||...++.
T Consensus 260 R~~~~~~i~~hp~f~~~~w~ 279 (345)
T 1xjd_A 260 RLGVRGDIRQHPLFREINWE 279 (345)
T ss_dssp SBTTBSCGGGSGGGTTCCHH
T ss_pred cCCChHHHHcCccccCCCHH
Confidence 99998 99999999887764
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=388.24 Aligned_cols=251 Identities=27% Similarity=0.353 Sum_probs=199.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+.+.|.+.+.||+|+||+||++... +|+.||||++..... ....+|+..+....+|||||++++++.+++..
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~ 132 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence 345577999999999999999998654 799999999865322 23455666666777999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||+|.++|.+++... ...+++.+++.++.||+.||+||
T Consensus 133 ~lv~e~~~~~L~~~~~~~---------------------------------------~~~l~~~~~~~i~~qi~~aL~~L 173 (311)
T 3p1a_A 133 YLQTELCGPSLQQHCEAW---------------------------------------GASLPEAQVWGYLRDTLLALAHL 173 (311)
T ss_dssp EEEEECCCCBHHHHHHHH---------------------------------------CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999987777665321 23578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+|||++.++ .+||+|||+++........ +.
T Consensus 174 H~~~ivH~Dikp~NIll~~~~--~~kl~DFG~a~~~~~~~~~------------------------------------~~ 215 (311)
T 3p1a_A 174 HSQGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGAG------------------------------------EV 215 (311)
T ss_dssp HHTTEECCCCSGGGEEECGGG--CEEECCCTTCEECC------------------------------------------C
T ss_pred HHCCEecCCCCHHHEEECCCC--CEEEccceeeeecccCCCC------------------------------------cc
Confidence 999999999999999997665 4999999999876432211 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
..||+.|+|||++.+ .++.++|||||||++|||++|..+|++..... .+.... ........++++.+||.+||+.|
T Consensus 216 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 292 (311)
T 3p1a_A 216 QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ--QLRQGYLPPEFTAGLSSELRSVLVMMLEPD 292 (311)
T ss_dssp CCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH--HHTTTCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred cCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--HHhccCCCcccccCCCHHHHHHHHHHcCCC
Confidence 469999999999876 79999999999999999999877777643221 111111 11223456789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCC
Q 002343 782 PDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~ 799 (934)
|++|||+.|+|+||||..
T Consensus 293 P~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 293 PKLRATAEALLALPVLRQ 310 (311)
T ss_dssp TTTSCCHHHHHTSGGGSC
T ss_pred hhhCcCHHHHHhCccccC
Confidence 999999999999999964
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=381.52 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=195.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
++|.+.+.||+|+||+||++...+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREIS-ILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHH-GGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHH-HHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 35888999999999999999777799999999864432 34556765 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|.++|.+++... ..++++.+++.++.||+.||+|||++||
T Consensus 81 ~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (288)
T 1ob3_A 81 HLDQDLKKLLDVC---------------------------------------EGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (288)
T ss_dssp CCSEEHHHHHHTS---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCHHHHHHhc---------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 9988777665321 2346778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+|+......... +...||+
T Consensus 122 ~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~t~ 164 (288)
T 1ob3_A 122 LHRDLKPQNLLINREGE--LKIADFGLARAFGIPVRKY-----------------------------------THEIVTL 164 (288)
T ss_dssp CCSCCCGGGEEECTTSC--EEECCTTHHHHHCC--------------------------------------------CCC
T ss_pred ecCCCCHHHEEEcCCCC--EEEeECccccccCcccccc-----------------------------------ccccccc
Confidence 99999999999976654 9999999998764321110 1146899
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcc-------------------------
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRK------------------------- 759 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~------------------------- 759 (934)
.|+|||++.+. .++.++|||||||++|+|++| .+||...... . ..+.....
T Consensus 165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T 1ob3_A 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243 (288)
T ss_dssp TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred cccCchheeCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccC
Confidence 99999999764 589999999999999999996 6677543322 1 12211100
Q ss_pred ---cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 760 ---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 760 ---~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.......++++.+||.+||+.||++|||++|+++||||.+
T Consensus 244 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 0011235688999999999999999999999999999965
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=384.44 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=198.4
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.++|.+.+.||+|+||+||++. ..+|+.||||++.... .+...+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL-VMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHH-HHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 4568888999999999999985 4679999999986432 234455655 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+ |+|.+++. ...+++.+++.++.||+.||+|||++||
T Consensus 98 ~~~~----------~~L~~~~~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i 137 (297)
T 3fxz_A 98 YLAG----------GSLTDVVT------------------------------ETCMDEGQIAAVCRECLQALEFLHSNQV 137 (297)
T ss_dssp CCTT----------CBHHHHHH------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CCCC----------CCHHHHHh------------------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 7643 34444332 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+|+......... ...+||+
T Consensus 138 ~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~gt~ 180 (297)
T 3fxz_A 138 IHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR-----------------------------------STMVGTP 180 (297)
T ss_dssp ECCCCSGGGEEECTTCC--EEECCCTTCEECCSTTCCB-----------------------------------CCCCSCG
T ss_pred eeCCCCHHHEEECCCCC--EEEeeCCCceecCCccccc-----------------------------------CCccCCc
Confidence 99999999999977664 9999999998765432211 1146999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcc--cccccCCCHHHHHHHHHcccCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~--~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
.|+|||++.+..++.++|||||||++|+|++| .+||..... ... .+..... ...+...++++.+||.+||+.||+
T Consensus 181 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 259 (297)
T 3fxz_A 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 259 (297)
T ss_dssp GGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTT
T ss_pred CccChhhhcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence 99999999999999999999999999999996 667654332 222 2222211 122345678999999999999999
Q ss_pred CCcCHHHHHcCCCCCCc
Q 002343 784 LRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~ 800 (934)
+|||++|+++||||...
T Consensus 260 ~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 260 KRGSAKELLQHQFLKIA 276 (297)
T ss_dssp TSCCHHHHTTCGGGGGC
T ss_pred HCcCHHHHhhChhhccc
Confidence 99999999999999643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=384.92 Aligned_cols=256 Identities=25% Similarity=0.352 Sum_probs=192.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC--------hhHHHHHHHH--HHHhCCCCceeEEEEEEe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--------HDVALKEIQN--LIASDQHPNIVRWYGVES 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~--------~~~~~~Ei~~--ll~~l~HpNIV~l~g~~~ 537 (934)
..+.++|.+.+.||+|+||+||++.. .+|+.||||++.... .....+|+.. .+..++||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 45667899999999999999999854 678999999986432 1345566552 233446999999999998
Q ss_pred cCC-----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHH
Q 002343 538 DQD-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (934)
Q Consensus 538 ~~~-----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 612 (934)
+.. ..|+|||+|.++|.+++... ...++++.+++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------------------------------~~~~~~~~~~~~i~ 126 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVDQDLRTYLDKA--------------------------------------PPPGLPAETIKDLM 126 (308)
T ss_dssp ECCSSSEEEEEEEEECCCCBHHHHHHTC--------------------------------------CTTCSCHHHHHHHH
T ss_pred ccCCCCceeEEEEehhhhcCHHHHHhhc--------------------------------------cCCCCCHHHHHHHH
Confidence 755 58999999888777665321 02347889999999
Q ss_pred HHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccc
Q 002343 613 RDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECV 692 (934)
Q Consensus 613 ~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (934)
.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+........
T Consensus 127 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~---------------------------- 176 (308)
T 3g33_A 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLARIYSYQMAL---------------------------- 176 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCTTTEEECTTS--CEEECSCSCTTTSTTCCCS----------------------------
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CEEEeeCccccccCCCccc----------------------------
Confidence 9999999999999999999999999997665 4999999999865432211
Q ss_pred cccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcc---c-------
Q 002343 693 FQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRK---D------- 760 (934)
Q Consensus 693 ~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~---~------- 760 (934)
+..+||+.|+|||++.+..++.++|||||||++|+|++| .+||..... ... .+..... .
T Consensus 177 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 247 (308)
T 3g33_A 177 --------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 247 (308)
T ss_dssp --------GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSC
T ss_pred --------CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhccchh
Confidence 114689999999999999999999999999999999996 666654332 222 2221100 0
Q ss_pred ----------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 761 ----------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 761 ----------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
....+.++++.+||.+||+.||++|||+.|+|+||||...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 248 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp SSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 01124568899999999999999999999999999997644
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=387.15 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=202.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---------hhHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS-ILKEIQHPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHH-HHHhCCCCCCCcEEEEEEe
Confidence 34667899999999999999999855 468999999997542 234556665 7888999999999999999
Q ss_pred CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+..|+|||||.+ +|.+++ .. ...+++.+++.++.||+.
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~ 125 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFL-----------AE-----------------------------KESLTEEEATEFLKQILN 125 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHH-----------TT-----------------------------SSCCBHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCCHHHHH-----------Hh-----------------------------cCCcCHHHHHHHHHHHHH
Confidence 9999999997753 554443 21 234678899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
||+|||++||+||||||+|||++.++ ...+||+|||+|+.+......
T Consensus 126 al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------- 174 (326)
T 2y0a_A 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF------------------------------- 174 (326)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC-------------------------------
T ss_pred HHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc-------------------------------
Confidence 99999999999999999999997654 225999999999876543211
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccc----cccCCCHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDL----FLVEHIPEA 770 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~----~~~~~~~e~ 770 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||. .........+...... .....++++
T Consensus 175 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (326)
T 2y0a_A 175 -----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248 (326)
T ss_dssp -----CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred -----ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHC-cCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHH
Confidence 114699999999999999999999999999999999997 55664 3333332222222111 123567899
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.+||.+||+.||++|||+.++|+||||...+.
T Consensus 249 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 280 (326)
T 2y0a_A 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280 (326)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSTTTSCCSH
T ss_pred HHHHHHHccCChhhCCCHHHHhcCCCccCCcc
Confidence 99999999999999999999999999987654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=391.50 Aligned_cols=253 Identities=19% Similarity=0.288 Sum_probs=200.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.+.|.+.+.||+|+||+||++.. .+++.||+|.+..... ....+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-ILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHH-HHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHH-HHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 457799999999999999999854 4689999999875443 23455665 7788999999999999999999999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||.+ +|.+++ ... ...+++.+++.++.||+.||+|||++|
T Consensus 82 ~~~g~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~~g 122 (321)
T 1tki_A 82 FISGLDIFERI-----------NTS----------------------------AFELNEREIVSYVHQVCEALQFLHSHN 122 (321)
T ss_dssp CCCCCBHHHHH-----------TSS----------------------------SCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7764 444443 210 234688899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++...+||+|||+++.+...... ....||
T Consensus 123 ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------~~~~gt 166 (321)
T 1tki_A 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF------------------------------------RLLFTA 166 (321)
T ss_dssp EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE------------------------------------EEEESC
T ss_pred CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc------------------------------------ccccCC
Confidence 99999999999997643456999999999876543211 124689
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhccccc----ccCCCHHHHHHHHHcccCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~----~~~~~~e~~dLI~~~L~~D 781 (934)
+.|+|||++.+..++.++|||||||++|+|++| .+||... .......+......+ ....++++.+||.+||+.|
T Consensus 167 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 245 (321)
T 1tki_A 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG-INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245 (321)
T ss_dssp GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSS
T ss_pred hhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhC-CCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCC
Confidence 999999999998899999999999999999996 6666543 333332222222111 2356789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCc
Q 002343 782 PDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~ 800 (934)
|++|||+.|+|+||||...
T Consensus 246 p~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 246 RKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp GGGSCCHHHHHHSHHHHSC
T ss_pred hhHCcCHHHHhcChhhccC
Confidence 9999999999999999654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=389.37 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=198.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHh-CCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIAS-DQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~-l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+... +...+|.. ++.. .+|||||++++++.+.+.+|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHH-HHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHH-HHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 4688899999999999999865 4689999999975431 22345555 4444 489999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ |+|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 88 v~e~~~g----------g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~ 128 (345)
T 3a8x_A 88 VIEYVNG----------GDLMFHMQR-----------------------------QRKLPEEHARFYSAEISLALNYLHE 128 (345)
T ss_dssp EECCCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCC----------CcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9996653 444443321 2457888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++. +||+|||+|+........ ....+
T Consensus 129 ~~ivHrDlkp~NIll~~~g~--~kL~DFG~a~~~~~~~~~-----------------------------------~~~~~ 171 (345)
T 3a8x_A 129 RGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDT-----------------------------------TSTFC 171 (345)
T ss_dssp TTCBCCCCCGGGEEECTTSC--EEECCGGGCBCSCCTTCC-----------------------------------BCCCC
T ss_pred CCceecCCCHHHEEECCCCC--EEEEeccccccccCCCCc-----------------------------------ccccC
Confidence 99999999999999976664 999999999864322111 01257
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC----------chhHHHHHHhhcccccccCCCHHHHHHH
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE----------SFERDANIVKDRKDLFLVEHIPEAVDLF 774 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~----------~~~~~~~i~~~~~~~~~~~~~~e~~dLI 774 (934)
||+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+.......+...++++++||
T Consensus 172 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 250 (345)
T 3a8x_A 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG-RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVL 250 (345)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred CCccccCccccCCCCCChHHhHHHHHHHHHHHHhC-CCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999996 677743 1112222333333444556788999999
Q ss_pred HHcccCCCCCCcCH------HHHHcCCCCCCccch
Q 002343 775 TRLLDPNPDLRPKA------QNVLNHPFFWTADTR 803 (934)
Q Consensus 775 ~~~L~~DP~~RPTa------~evL~HPff~~~~~~ 803 (934)
.+||+.||++||++ +++++||||.+.++.
T Consensus 251 ~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~ 285 (345)
T 3a8x_A 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 285 (345)
T ss_dssp HHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHH
T ss_pred HHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHH
Confidence 99999999999995 899999999887654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=391.74 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=201.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC------hhHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++... +|+.||||++.+.. .+...+|.. ++..+ +||||+++++++.+.+.+|+
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~-~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR-VLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHH-HHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 56888999999999999998654 58899999997532 233445555 55544 89999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ |+|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 99 v~E~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~ 139 (353)
T 2i0e_A 99 VMEYVNG----------GDLMYHIQQ-----------------------------VGRFKEPHAVFYAAEIAIGLFFLQS 139 (353)
T ss_dssp EEECCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9996653 444444322 2456888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.++. +||+|||+|+........ ....+
T Consensus 140 ~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~-----------------------------------~~~~~ 182 (353)
T 2i0e_A 140 KGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVT-----------------------------------TKTFC 182 (353)
T ss_dssp TTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCC-----------------------------------BCCCC
T ss_pred CCEEeccCCHHHEEEcCCCc--EEEEeCCcccccccCCcc-----------------------------------ccccc
Confidence 99999999999999976664 999999999864322111 01257
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+......++...++++++||.+||+.||+
T Consensus 183 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~ 261 (353)
T 2i0e_A 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPG 261 (353)
T ss_dssp SCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTT
T ss_pred CCccccChhhhcCCCcCCcccccchHHHHHHHHcC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 99999999999999999999999999999999996 666654 3333333333444445566789999999999999999
Q ss_pred CCcC-----HHHHHcCCCCCCccchh
Q 002343 784 LRPK-----AQNVLNHPFFWTADTRL 804 (934)
Q Consensus 784 ~RPT-----a~evL~HPff~~~~~~~ 804 (934)
+||+ ++++++||||...++..
T Consensus 262 ~R~~~~~~~~~~i~~h~~f~~~~w~~ 287 (353)
T 2i0e_A 262 KRLGCGPEGERDIKEHAFFRYIDWEK 287 (353)
T ss_dssp SCTTCSTTHHHHHHTSGGGTTCCHHH
T ss_pred HcCCCCCCCHHHHhcCccccCCCHHH
Confidence 9994 69999999998877643
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=392.01 Aligned_cols=259 Identities=24% Similarity=0.296 Sum_probs=202.9
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC--------hhHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~--------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+. +++.++|||||++++++.++
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~ 98 (351)
T 3c0i_A 20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS-ICHMLKHPHIVELLETYSSD 98 (351)
T ss_dssp CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHH-HHHHCCCTTBCCEEEEEEET
T ss_pred CccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHH-HHHhCCCCCCCcEEEEEEeC
Confidence 34567899999999999999999854 568999999986421 234556665 78889999999999999999
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+.+|+|||||.+ +|.+++ ..... ....+++..++.++.||+.|
T Consensus 99 ~~~~lv~e~~~g~~L~~~l-----------~~~~~-------------------------~~~~~~~~~~~~i~~qi~~a 142 (351)
T 3c0i_A 99 GMLYMVFEFMDGADLCFEI-----------VKRAD-------------------------AGFVYSEAVASHYMRQILEA 142 (351)
T ss_dssp TEEEEEEECCSSCBHHHHH-----------HHHHH-------------------------TTCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCHHHHH-----------HHhcc-------------------------cCCCCCHHHHHHHHHHHHHH
Confidence 999999997763 454443 21100 12346888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
|+|||++||+||||||+|||++.++ ...+||+|||+++.+.......
T Consensus 143 l~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~-------------------------------- 190 (351)
T 3c0i_A 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA-------------------------------- 190 (351)
T ss_dssp HHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBC--------------------------------
T ss_pred HHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeee--------------------------------
Confidence 9999999999999999999997543 3459999999998765432110
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHH-HHhhccccc---ccCCCHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN-IVKDRKDLF---LVEHIPEAVDL 773 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~-i~~~~~~~~---~~~~~~e~~dL 773 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||......... +........ ....++++++|
T Consensus 191 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 266 (351)
T 3c0i_A 191 ---GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG-CLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDL 266 (351)
T ss_dssp ---CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHH
T ss_pred ---cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHC-CCCCCCcHHHHHHHHHcCCCCCCccccccCCHHHHHH
Confidence 114699999999999999999999999999999999996 6677655443333 333222211 23467899999
Q ss_pred HHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
|.+||+.||++|||+.++|+||||...
T Consensus 267 i~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 267 VRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 999999999999999999999999653
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=401.68 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=199.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+.+.|.+.+.||+|+||+||++. ..+|+.||+|++..... +...+|+. +++.++|||||++++++.+++..
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR-ICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHH-HHHHCCBTTBCCEEEEEECSSEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCcCCCeEEEEEEECCEE
Confidence 4566789999999999999999984 46799999999976542 23445655 78889999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||.+ |+|.+++.. ...+++.++..++.||+.||+||
T Consensus 86 ~lv~E~~~g----------g~L~~~i~~-----------------------------~~~~~e~~~~~i~~qil~aL~~l 126 (444)
T 3soa_A 86 YLIFDLVTG----------GELFEDIVA-----------------------------REYYSEADASHCIQQILEAVLHC 126 (444)
T ss_dssp EEEECCCBC----------CBHHHHHHH-----------------------------CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 999997764 333333321 34578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 623 HEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|++||+||||||+|||++.+ ....+||+|||+|+......... .
T Consensus 127 H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~-----------------------------------~ 171 (444)
T 3soa_A 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW-----------------------------------F 171 (444)
T ss_dssp HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC-----------------------------------C
T ss_pred HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee-----------------------------------e
Confidence 99999999999999999743 23469999999998765432211 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhccccc----ccCCCHHHHHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLF----LVEHIPEAVDLFTR 776 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~----~~~~~~e~~dLI~~ 776 (934)
..+||+.|+|||++.+..++.++|||||||++|+|++| .+||.. ........+......+ ....++++++||.+
T Consensus 172 ~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 250 (444)
T 3soa_A 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250 (444)
T ss_dssp CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred cccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhC-CCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHH
Confidence 15699999999999999999999999999999999997 556644 3333333333222211 23457899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||+.||++|||+.|+|+||||..
T Consensus 251 ~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 251 MLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HcCCChhHCCCHHHHhcCccccC
Confidence 99999999999999999999954
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=389.67 Aligned_cols=250 Identities=25% Similarity=0.324 Sum_probs=202.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++||||+++++++.+.+.+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-ILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 5688899999999999999865 468999999986532 234455655 77889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 120 ~e~~~----------gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (350)
T 1rdq_E 120 MEYVA----------GGEMFSHLRR-----------------------------IGRFSEPHARFYAAQIVLTFEYLHSL 160 (350)
T ss_dssp EECCT----------TCBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCC----------CCcHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99665 3444444321 24568889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+|+....... ..+|
T Consensus 161 ~ivHrDlkp~NIll~~~g~--~kL~DFg~a~~~~~~~~--------------------------------------~~~g 200 (350)
T 1rdq_E 161 DLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTW--------------------------------------TLCG 200 (350)
T ss_dssp TEECCCCSGGGEEECTTSC--EEECCCTTCEECSSCBC--------------------------------------CCEE
T ss_pred CcccccCccceEEECCCCC--EEEcccccceeccCCcc--------------------------------------cccC
Confidence 9999999999999976664 99999999987643210 1469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.. ........+.......+...++++.+||.+||+.||++
T Consensus 201 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~ 279 (350)
T 1rdq_E 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTK 279 (350)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTT
T ss_pred CccccCHHHhcCCCCCCcCCEecccHhHhHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHh
Confidence 9999999999999999999999999999999997 566644 33333333333344455667899999999999999999
Q ss_pred CcC-----HHHHHcCCCCCCccch
Q 002343 785 RPK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 785 RPT-----a~evL~HPff~~~~~~ 803 (934)
||+ ++++++||||...++.
T Consensus 280 R~~~~~~~~~ei~~h~~f~~~~w~ 303 (350)
T 1rdq_E 280 RFGNLKNGVNDIKNHKWFATTDWI 303 (350)
T ss_dssp CTTSSTTTTHHHHTSGGGTTCCHH
T ss_pred ccCCccCCHHHHHhCcCcCCCCHH
Confidence 998 9999999999887764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=393.44 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=199.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++||||+++++++.+.+..|+|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS-YLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4588899999999999999865 678999999986432 234556665 78899999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+++|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 88 ~E~~~g~l~~~l~~----------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~ 127 (336)
T 3h4j_B 88 IEYAGGELFDYIVE----------------------------------------KKRMTEDEGRRFFQQIICAIEYCHRH 127 (336)
T ss_dssp ECCCCEEHHHHHHH----------------------------------------HCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcHHHHHHH----------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99887776665521 34578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+|+........ ...+|
T Consensus 128 givH~Dlkp~NIll~~~~--~~kl~DFG~s~~~~~~~~~------------------------------------~~~~g 169 (336)
T 3h4j_B 128 KIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFL------------------------------------KTSCG 169 (336)
T ss_dssp TCCCCCCSTTTEEECTTC--CEEECCSSCTBTTTTSBTT------------------------------------CCCTT
T ss_pred CeEecCCchhhEEEcCCC--CEEEEEeccceeccCCccc------------------------------------ccccC
Confidence 999999999999997665 4999999999876543211 11569
Q ss_pred CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|+.|+|||++.+..+ +.++|||||||++|+|++| .+||...... ....+.......+...++++.+||.+||+.||.
T Consensus 170 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~ 248 (336)
T 3h4j_B 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG-RLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPM 248 (336)
T ss_dssp STTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHS-SCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGG
T ss_pred CcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhC-CCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChh
Confidence 999999999998876 7899999999999999996 6777543221 111111222233445678999999999999999
Q ss_pred CCcCHHHHHcCCCCCCc
Q 002343 784 LRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~ 800 (934)
+|||++|+++||||...
T Consensus 249 ~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 249 QRITIQEIRRDPWFNVN 265 (336)
T ss_dssp GSCCHHHHTTCHHHHTT
T ss_pred HCcCHHHHHhChhhccC
Confidence 99999999999999653
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=397.18 Aligned_cols=273 Identities=28% Similarity=0.370 Sum_probs=188.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhC-CCCceeEEEEEEecCC-
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASD-QHPNIVRWYGVESDQD- 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~- 540 (934)
+.+.++|.+.+.||+|+||+||++. ..+|+.||||++.+.. .....+|+. ++..+ +|||||++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~-~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM-ILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHH-HHHHTTTCTTBCCEEEEEECTTS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHH-HHHhccCCCCCCeeeeEEecCCC
Confidence 4456789999999999999999985 4679999999986432 134567776 44555 5999999999997544
Q ss_pred -eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 -~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
.+|+|||||+++|.+++. ...+++..++.++.||+.||
T Consensus 84 ~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~~~~~~~~~i~~qi~~~L 122 (388)
T 3oz6_A 84 RDVYLVFDYMETDLHAVIR-----------------------------------------ANILEPVHKQYVVYQLIKVI 122 (388)
T ss_dssp SCEEEEEECCSEEHHHHHH-----------------------------------------HTCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCcCHHHHHH-----------------------------------------cCCCCHHHHHHHHHHHHHHH
Confidence 799999999877665552 23457778899999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++|||||||||+|||++.++ .+||+|||+|+.+............... ............
T Consensus 123 ~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 186 (388)
T 3oz6_A 123 KYLHSGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRRVTNNIPLSIN--------------ENTENFDDDQPI 186 (388)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEESSSCCCCCCCGGGCCC--------------------------
T ss_pred HHHHhCCEEeCCCCHHHeEEcCCC--CEEecCCccccccccccccccccccccc--------------cccccccccccc
Confidence 999999999999999999997665 4999999999876543211100000000 000000111122
Q ss_pred eecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHH-HHhhcc-----------------
Q 002343 700 FTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDAN-IVKDRK----------------- 759 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~-i~~~~~----------------- 759 (934)
.+..+||+.|+|||++.+ ..++.++|||||||++|||++| .+||... ...... ++....
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~ 265 (388)
T 3oz6_A 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKT 265 (388)
T ss_dssp ---CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHH
Confidence 344689999999999987 6789999999999999999996 6666543 222211 111000
Q ss_pred -----------------c------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 -----------------D------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 -----------------~------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
. ......++++.+||.+||+.||++|||++|+|+||||...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 266 MIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred HHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence 0 0011457899999999999999999999999999998643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=384.16 Aligned_cols=254 Identities=27% Similarity=0.357 Sum_probs=195.4
Q ss_pred cceEEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCCh-------hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTHH-------DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
.+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++||||+++++++.+.+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN-ILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHH-HHHHCCCTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHH-HHHhCCCCCccceeEEEEcCC
Confidence 46789999999999999999865 4789999999975421 22344554 788899999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|+|||||.+ |+|.+++.. ...+++.+++.++.||+.||+
T Consensus 95 ~~~lv~e~~~~----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~al~ 135 (327)
T 3a62_A 95 KLYLILEYLSG----------GELFMQLER-----------------------------EGIFMEDTACFYLAEISMALG 135 (327)
T ss_dssp CEEEEEECCTT----------EEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCC----------CcHHHHHHh-----------------------------CCCCCHHHHHHHHHHHHHHHH
Confidence 99999997753 333333321 234678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++. +||+|||+++........ .
T Consensus 136 ~lH~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~-----------------------------------~ 178 (327)
T 3a62_A 136 HLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKESIHDGTV-----------------------------------T 178 (327)
T ss_dssp HHHHTTCCCCCCCTTTEEECTTSC--EEECCCSCC---------------------------------------------
T ss_pred HHHhCCEEcccCCHHHeEECCCCc--EEEEeCCcccccccCCcc-----------------------------------c
Confidence 999999999999999999976654 999999999764332111 0
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHccc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||... .......+.......+...++++.+||.+||+
T Consensus 179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~ 257 (327)
T 3a62_A 179 HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG-APPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257 (327)
T ss_dssp CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSC
T ss_pred cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh
Confidence 115699999999999999999999999999999999996 6676543 33333333333333445667899999999999
Q ss_pred CCCCCCc-----CHHHHHcCCCCCCccch
Q 002343 780 PNPDLRP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 780 ~DP~~RP-----Ta~evL~HPff~~~~~~ 803 (934)
.||++|| ++.++++||||...++.
T Consensus 258 ~dp~~R~~~~~~~~~e~l~hp~f~~~~~~ 286 (327)
T 3a62_A 258 RNAASRLGAGPGDAGEVQAHPFFRHINWE 286 (327)
T ss_dssp SCGGGSTTSSTTTHHHHHHSGGGSSCCHH
T ss_pred cCHhhccCCCCCCHHHHHcCCcccCCCHH
Confidence 9999999 88999999999876654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=398.59 Aligned_cols=258 Identities=22% Similarity=0.326 Sum_probs=200.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++.+.. .....+|+ .+++.++|||||++++++.+.+.+
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~-~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER-DIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHH-HHHHHCCCTTBCCEEEEEECSSEE
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHH-HHHHhCCCCCCCeEEEEEEECCEE
Confidence 3446799999999999999999865 458999999996532 12234444 488899999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||||.+ |+|.+++. ...+++..++.++.||+.||+||
T Consensus 145 ~lV~E~~~g----------g~L~~~l~------------------------------~~~~~e~~~~~~~~qi~~aL~~L 184 (410)
T 3v8s_A 145 YMVMEYMPG----------GDLVNLMS------------------------------NYDVPEKWARFYTAEVVLALDAI 184 (410)
T ss_dssp EEEECCCTT----------EEHHHHHH------------------------------HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC----------CcHHHHHH------------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 999996643 44443332 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+|||++.++. +||+|||+|+.+....... ...
T Consensus 185 H~~givHrDLKp~NILl~~~g~--ikL~DFG~a~~~~~~~~~~----------------------------------~~~ 228 (410)
T 3v8s_A 185 HSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEGMVR----------------------------------CDT 228 (410)
T ss_dssp HHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSEEE----------------------------------CCS
T ss_pred HHCCeEeccCCHHHeeECCCCC--EEEeccceeEeeccCCccc----------------------------------ccC
Confidence 9999999999999999976664 9999999998765432111 112
Q ss_pred CCCCCccccchhcccCC----CcccccccchhhhhHHhhcCCCCCCC-CchhHHH-HHHhhccc---ccccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGR----QTRAIDLFSLGCILFFCITGGKHPYG-ESFERDA-NIVKDRKD---LFLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~----~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~-~i~~~~~~---~~~~~~~~e~~dL 773 (934)
.+||+.|+|||++.+.. ++.++|||||||++|||++| .+||. ....... .++..... ......++++++|
T Consensus 229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l 307 (410)
T 3v8s_A 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG-DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307 (410)
T ss_dssp CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHH
T ss_pred CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhC-CCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHH
Confidence 57999999999998765 88999999999999999996 55664 4333332 33332211 1123567999999
Q ss_pred HHHcccCCCCC--CcCHHHHHcCCCCCCccchhh
Q 002343 774 FTRLLDPNPDL--RPKAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 774 I~~~L~~DP~~--RPTa~evL~HPff~~~~~~~~ 805 (934)
|.+||+.+|.+ ||+++||++||||.+.++...
T Consensus 308 i~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~ 341 (410)
T 3v8s_A 308 ICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWE 341 (410)
T ss_dssp HHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCST
T ss_pred HHHHccChhhhCCCCCHHHHhcCccccCCCHHHH
Confidence 99999999988 999999999999988765443
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=394.99 Aligned_cols=255 Identities=25% Similarity=0.286 Sum_probs=199.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+... ....+|...+++.++|||||++++++.+.+.+|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 5688999999999999999865 4588999999976432 22344544345678999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 118 ~E~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 158 (373)
T 2r5t_A 118 LDYING----------GELFYHLQR-----------------------------ERCFLEPRARFYAAEIASALGYLHSL 158 (373)
T ss_dssp EECCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 996653 444444322 24567888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+........ ....+|
T Consensus 159 givHrDlkp~NIll~~~g~--ikL~DFG~a~~~~~~~~~-----------------------------------~~~~~g 201 (373)
T 2r5t_A 159 NIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHNST-----------------------------------TSTFCG 201 (373)
T ss_dssp TCCCCCCCGGGEEECTTSC--EEECCCCBCGGGBCCCCC-----------------------------------CCSBSC
T ss_pred CceecCCCHHHEEECCCCC--EEEeeCccccccccCCCc-----------------------------------cccccC
Confidence 9999999999999977664 999999999864332111 012579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||. .........+.......+...++++++||.+||+.||.+
T Consensus 202 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~ 280 (373)
T 2r5t_A 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTK 280 (373)
T ss_dssp CCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGG
T ss_pred CccccCHHHhCCCCCCchhhhHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHh
Confidence 9999999999999999999999999999999997 55664 444443333333444445667899999999999999999
Q ss_pred CcCH----HHHHcCCCCCCccchh
Q 002343 785 RPKA----QNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RPTa----~evL~HPff~~~~~~~ 804 (934)
||++ .++++||||...++..
T Consensus 281 R~~~~~~~~~i~~h~~f~~~~w~~ 304 (373)
T 2r5t_A 281 RLGAKDDFMEIKSHVFFSLINWDD 304 (373)
T ss_dssp STTTTTTHHHHHTSGGGTTCCHHH
T ss_pred CCCCCCCHHHHhCCccccCCCHHH
Confidence 9987 6999999998877653
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=390.32 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=197.0
Q ss_pred CceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCC-----CCceeEEEEEEec
Q 002343 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQ-----HPNIVRWYGVESD 538 (934)
Q Consensus 467 ~~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~-----HpNIV~l~g~~~~ 538 (934)
.+..+.+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.+. |||||++++++..
T Consensus 29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEAD-ILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHH-HHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHH-HHHHhcccCCCCCCeecccceeeE
Confidence 3467888999999999999999999855 5689999999964332 23444554 556564 9999999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+..|+|||+|.++|.+++... ...++++.+++.++.||+.|
T Consensus 108 ~~~~~lv~e~~~~~L~~~~~~~--------------------------------------~~~~~~~~~~~~i~~qi~~a 149 (360)
T 3llt_A 108 YDHMCLIFEPLGPSLYEIITRN--------------------------------------NYNGFHIEDIKLYCIEILKA 149 (360)
T ss_dssp TTEEEEEECCCCCBHHHHHHHT--------------------------------------TTCCCCHHHHHHHHHHHHHH
T ss_pred CCeeEEEEcCCCCCHHHHHHhc--------------------------------------CCCCCCHHHHHHHHHHHHHH
Confidence 9999999998877777666321 12347888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecC-----------------------CCceEEEeeccccccccCCCcccccCCCCcchh
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKD-----------------------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQ 675 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d-----------------------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~ 675 (934)
|+|||++|||||||||+|||++.+ ....+||+|||+|+.......
T Consensus 150 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------ 217 (360)
T 3llt_A 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG------------ 217 (360)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC------------
T ss_pred HHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc------------
Confidence 999999999999999999999641 134699999999986433211
Q ss_pred hHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHH
Q 002343 676 LVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANI 754 (934)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i 754 (934)
..+||+.|+|||++.+..++.++|||||||++|+|++| .+||..... .....
T Consensus 218 --------------------------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~ 270 (360)
T 3llt_A 218 --------------------------SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG-SLLFRTHEHMEHLAM 270 (360)
T ss_dssp --------------------------SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHH
T ss_pred --------------------------CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC-CCCCCCCcHHHHHHH
Confidence 14689999999999999999999999999999999996 667754322 21111
Q ss_pred Hhhccc----------------------------------------------ccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 755 VKDRKD----------------------------------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 755 ~~~~~~----------------------------------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
+..... .......+++.+||.+||+.||++|||+
T Consensus 271 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta 350 (360)
T 3llt_A 271 MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSP 350 (360)
T ss_dssp HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCH
Confidence 111000 0001123678899999999999999999
Q ss_pred HHHHcCCCCC
Q 002343 789 QNVLNHPFFW 798 (934)
Q Consensus 789 ~evL~HPff~ 798 (934)
.|+|+||||.
T Consensus 351 ~elL~hp~f~ 360 (360)
T 3llt_A 351 AELLKHKFLE 360 (360)
T ss_dssp HHHTTSGGGC
T ss_pred HHHhcCcccC
Confidence 9999999984
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=390.58 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=200.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+.+..|
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEE
Confidence 4567899999999999999999854 5689999999975432 23445665 788899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++.. ...+++.+++.++.||+.||+|||
T Consensus 105 lv~e~~~g----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH 145 (362)
T 2bdw_A 105 LVFDLVTG----------GELFEDIVA-----------------------------REFYSEADASHCIQQILESIAYCH 145 (362)
T ss_dssp EEECCCCS----------CBHHHHHTT-----------------------------CSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997764 333333321 234678899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++||+||||||+|||++.++ ...+||+|||+++........ ..
T Consensus 146 ~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~------------------------------------~~ 189 (362)
T 2bdw_A 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW------------------------------------HG 189 (362)
T ss_dssp HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC------------------------------------CC
T ss_pred HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc------------------------------------cc
Confidence 99999999999999997543 246999999999876532211 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccc----cccCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDL----FLVEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~----~~~~~~~e~~dLI~~~ 777 (934)
.+||+.|+|||++.+..++.++|||||||++|+|++| .+||.. ........+...... .....++++.+||.+|
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (362)
T 2bdw_A 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 268 (362)
T ss_dssp SCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHH
T ss_pred CCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHH
Confidence 5699999999999999999999999999999999997 566644 333333333222211 1234578999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~ 800 (934)
|+.||++|||+.++|+||||...
T Consensus 269 L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 269 LTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp SCSSGGGSCCHHHHTTSHHHHTH
T ss_pred cCCChhhCcCHHHHhcCcccCCC
Confidence 99999999999999999999653
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=402.58 Aligned_cols=282 Identities=24% Similarity=0.305 Sum_probs=186.7
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec-----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----- 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----- 538 (934)
.+.++|.+.+.||+|+||+||++. ..+|+.||||++.+... ....+|+. +++.++|||||++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIA-ILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHH-HHHhCCCCCCCceEEEEecCCccc
Confidence 456789999999999999999984 45789999999965422 23456766 7888899999999999844
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+.+|+|||+|+++|.+++.. ...+++..++.++.||+.|
T Consensus 129 ~~~~~lv~e~~~~~L~~~~~~----------------------------------------~~~l~~~~~~~~~~qi~~a 168 (458)
T 3rp9_A 129 FDELYVVLEIADSDFKKLFRT----------------------------------------PVYLTELHIKTLLYNLLVG 168 (458)
T ss_dssp CCCEEEEECCCSEEHHHHHHS----------------------------------------SCCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccccchhhhccc----------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 357999999988776665521 2347888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++|||||||||+||||+.++ .+||+|||+|+.+................. ..... ..........
T Consensus 169 L~~LH~~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~ 238 (458)
T 3rp9_A 169 VKYVHSAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPISPRED-------DMNLV-TFPHTKNLKR 238 (458)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTTC--CEEECCCTTCBCTTSCTTCCCCCC-----------------------------
T ss_pred HHHHHhCCcCCCCCChhhEEECCCC--CEeecccccchhccCccccccccccCcccc-------ccccc-cccccccccc
Confidence 9999999999999999999997665 499999999998754322111000000000 00000 0000000001
Q ss_pred eeecCCCCCccccchhc-ccCCCcccccccchhhhhHHhhcC----------CCCCCCCch-------------------
Q 002343 699 FFTVGYGSSGWQAPEQL-LQGRQTRAIDLFSLGCILFFCITG----------GKHPYGESF------------------- 748 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l-~~~~~t~ksDIWSLGvILyeLltG----------g~~Pf~~~~------------------- 748 (934)
..+..+||+.|+|||++ .+..|+.++||||||||||||++| +.++|....
T Consensus 239 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~ 318 (458)
T 3rp9_A 239 QLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTR 318 (458)
T ss_dssp ------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CH
T ss_pred cccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccccccccccc
Confidence 23346799999999987 456799999999999999999985 456663321
Q ss_pred ---hHHHHHHh-----------------------hcc-------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 749 ---ERDANIVK-----------------------DRK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 749 ---~~~~~i~~-----------------------~~~-------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
.....+.. ... .......++++.+||.+||+.||++|||++|+|+||
T Consensus 319 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp 398 (458)
T 3rp9_A 319 GNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHP 398 (458)
T ss_dssp HHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred CCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence 00000000 000 001233478999999999999999999999999999
Q ss_pred CCCCccc
Q 002343 796 FFWTADT 802 (934)
Q Consensus 796 ff~~~~~ 802 (934)
||.....
T Consensus 399 ~f~~~~~ 405 (458)
T 3rp9_A 399 FFKEVRI 405 (458)
T ss_dssp GGTTTCC
T ss_pred hhhhcCC
Confidence 9976543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=377.60 Aligned_cols=246 Identities=28% Similarity=0.439 Sum_probs=191.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----------------------------hHHHHHHHHHHH
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----------------------------DVALKEIQNLIA 522 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----------------------------~~~~~Ei~~ll~ 522 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+... +...+|+. +++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~ 91 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA-ILK 91 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHH-HHH
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH-HHH
Confidence 5688999999999999999854 5689999999865421 23456665 788
Q ss_pred hCCCCceeEEEEEEec--CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhh
Q 002343 523 SDQHPNIVRWYGVESD--QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599 (934)
Q Consensus 523 ~l~HpNIV~l~g~~~~--~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (934)
.++||||+++++++.+ .+..|+|||||.+ +|.++. .
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----------------------------------------~ 130 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----------------------------------------T 130 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----------------------------------------C
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----------------------------------------h
Confidence 9999999999999987 6789999998864 444322 1
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHH
Q 002343 600 ANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYL 679 (934)
Q Consensus 600 ~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~ 679 (934)
...+++.+++.++.||+.||+|||++||+||||||+|||++.++. +||+|||+++.+.......
T Consensus 131 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~-------------- 194 (298)
T 2zv2_A 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH--IKIADFGVSNEFKGSDALL-------------- 194 (298)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECSSSSCEE--------------
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCC--EEEecCCCccccccccccc--------------
Confidence 245788899999999999999999999999999999999976654 9999999998765432111
Q ss_pred HHHHhhhhhhccccccccceeecCCCCCccccchhcccCC---CcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHH
Q 002343 680 VSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIV 755 (934)
Q Consensus 680 ~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~---~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~ 755 (934)
....||+.|+|||++.+.. ++.++|||||||++|+|++| .+||.... ......+
T Consensus 195 ---------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~ 252 (298)
T 2zv2_A 195 ---------------------SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCPFMDERIMCLHSKI 252 (298)
T ss_dssp ---------------------CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHH
T ss_pred ---------------------cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHC-CCCCCCccHHHHHHHH
Confidence 1146999999999998765 37899999999999999996 66665443 2222222
Q ss_pred hhcccc--cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 756 KDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 756 ~~~~~~--~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
...... .....++++.+||.+||+.||++|||+.|+++||||.
T Consensus 253 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred hcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 222211 1234678999999999999999999999999999984
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=385.81 Aligned_cols=255 Identities=24% Similarity=0.309 Sum_probs=193.8
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.-++|.+.+.||+|+||+||++. ..+++.||||++..... ....+|+. +++.++||||+++++++.+++..||
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS-LLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHH-HGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHH-HHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999985 45789999999965432 22346665 7888999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||+++|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 111 v~e~~~~~L~~~~~~----------------------------------------~~~~~~~~~~~i~~ql~~~l~~LH~ 150 (329)
T 3gbz_A 111 IFEYAENDLKKYMDK----------------------------------------NPDVSMRVIKSFLYQLINGVNFCHS 150 (329)
T ss_dssp EEECCSEEHHHHHHH----------------------------------------CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHhh----------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998877666521 2346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecC---CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 625 IGLIHRDLKPQNVLISKD---KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d---~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
+|||||||||+|||++.+ ....+||+|||+|+.+....... +
T Consensus 151 ~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------~ 195 (329)
T 3gbz_A 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF-----------------------------------T 195 (329)
T ss_dssp TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------------------------------------
T ss_pred CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccccc-----------------------------------C
Confidence 999999999999999643 23469999999998764322111 1
Q ss_pred cCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcccc-----------------
Q 002343 702 VGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKDL----------------- 761 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~~----------------- 761 (934)
..+||+.|+|||++.+.. ++.++|||||||++|+|++| .+||...... . ..+.......
T Consensus 196 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (329)
T 3gbz_A 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK-TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS 274 (329)
T ss_dssp ----CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred CCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHC-CCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhh
Confidence 146899999999998754 79999999999999999996 6666543322 1 2222110000
Q ss_pred ------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 762 ------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 762 ------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.....++++.+||.+||+.||++|||++|+|+||||.+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp CCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred hhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 00114578999999999999999999999999999987654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=405.81 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=189.3
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|.+.+.||+|+||+||++. ..+|+.||||++.+.. .....+|+. +++.++|||||++++++...
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCCSTT
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHH-HHHhCCCCCCCcEEEEEccCCccc
Confidence 456789999999999999999985 4568999999997542 134556665 78889999999999999654
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..+|||||||+++|.+.+ ...+++.+++.++.||+.
T Consensus 138 ~~~~~~lv~E~~~~~l~~~~------------------------------------------~~~l~~~~~~~~~~qil~ 175 (464)
T 3ttj_A 138 EFQDVYLVMELMDANLCQVI------------------------------------------QMELDHERMSYLLYQMLC 175 (464)
T ss_dssp TCCEEEEEEECCSEEHHHHH------------------------------------------TSCCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCHHHHH------------------------------------------hhcCCHHHHHHHHHHHHH
Confidence 468999999987665544 123577888999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++|||||||||+|||++.++ .+||+|||+|+.......
T Consensus 176 aL~~lH~~~iiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~---------------------------------- 219 (464)
T 3ttj_A 176 GIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFM---------------------------------- 219 (464)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCCCC-----CCC----------------------------------
T ss_pred HHHHHHHCCcccCCCChHhEEEeCCC--CEEEEEEEeeeecCCCcc----------------------------------
Confidence 99999999999999999999997665 499999999986543211
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhh------------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKD------------------ 757 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~------------------ 757 (934)
.+..+||+.|+|||++.+..|+.++|||||||++|||++| .+||.... .... .++..
T Consensus 220 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 220 --MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp --C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred --cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 1125799999999999999999999999999999999996 66665432 2211 11110
Q ss_pred ----ccc--------cccc----C-------CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 758 ----RKD--------LFLV----E-------HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 758 ----~~~--------~~~~----~-------~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
... .++. . .++++++||.+||+.||++|||++|+|+||||..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 000 0000 0 0357999999999999999999999999999964
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=381.68 Aligned_cols=255 Identities=27% Similarity=0.367 Sum_probs=185.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++..|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREIS-LMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHH-HHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHH-HHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 4678889999999999999854 5689999999865432 45567776 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||+++|.+++.... .. ....++++..++.++.||+.||+|||++||
T Consensus 84 ~~~~~L~~~l~~~~-----------~~-----------------------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 129 (317)
T 2pmi_A 84 FMDNDLKKYMDSRT-----------VG-----------------------NTPRGLELNLVKYFQWQLLQGLAFCHENKI 129 (317)
T ss_dssp CCCCBHHHHHHHHH-----------SS-----------------------SCCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ecCCCHHHHHHhcc-----------cc-----------------------ccccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 99887777663210 00 012357888999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+++.+....... ...+||+
T Consensus 130 vH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~t~ 172 (317)
T 2pmi_A 130 LHRDLKPQNLLINKRGQ--LKLGDFGLARAFGIPVNTF-----------------------------------SSEVVTL 172 (317)
T ss_dssp ECCCCCGGGEEECTTCC--EEECCCSSCEETTSCCCCC-----------------------------------CCCCSCC
T ss_pred eeCCCChHHeEEcCCCC--EEECcCccceecCCCcccC-----------------------------------CCCcccc
Confidence 99999999999976664 9999999998764322111 1146899
Q ss_pred ccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhc--c-----------------------
Q 002343 708 GWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDR--K----------------------- 759 (934)
Q Consensus 708 ~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~--~----------------------- 759 (934)
.|+|||++.+. .++.++|||||||++|||++| .+||..... .... +.... .
T Consensus 173 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (317)
T 2pmi_A 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP 251 (317)
T ss_dssp TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCC
T ss_pred cccCchHhhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccc
Confidence 99999999864 589999999999999999996 667754332 2221 11100 0
Q ss_pred --------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 --------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 --------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.......++++.+||.+||+.||++|||+.|+|+||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp CCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence 00111346789999999999999999999999999999653
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=392.02 Aligned_cols=257 Identities=23% Similarity=0.343 Sum_probs=204.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.-+.|.+.+.||+|+||+||++.. .+++.||||++.+.. .....+|+. +++.++|||||++++++.+.+.+|
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ-IMQGLEHPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCCEEE
Confidence 346789999999999999999854 468899999986532 234556665 788899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|..++.. ...+++..++.++.||+.||+|||
T Consensus 92 lv~e~~~g----------g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qi~~aL~~LH 132 (384)
T 4fr4_A 92 MVVDLLLG----------GDLRYHLQQ-----------------------------NVHFKEETVKLFICELVMALDYLQ 132 (384)
T ss_dssp EEECCCTT----------EEHHHHHHT-----------------------------TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99996653 444443321 245788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.++. +||+|||+|+.+...... +..
T Consensus 133 ~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~~~~------------------------------------~~~ 174 (384)
T 4fr4_A 133 NQRIIHRDMKPDNILLDEHGH--VHITDFNIAAMLPRETQI------------------------------------TTM 174 (384)
T ss_dssp HTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTCCB------------------------------------CCC
T ss_pred HCCceeccCcHHHeEECCCCC--EEEeccceeeeccCCCce------------------------------------ecc
Confidence 999999999999999976664 999999999876543211 125
Q ss_pred CCCCccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCc----hhHHHHHHhhcccccccCCCHHHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 704 ~GT~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----~~~~~~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
+||+.|+|||++.+ ..++.++|||||||++|||++| .+||... .......+.......+...++++.+||.+
T Consensus 175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~ 253 (384)
T 4fr4_A 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG-RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKK 253 (384)
T ss_dssp CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHS-SCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhC-CCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHH
Confidence 79999999999974 4589999999999999999996 6676432 22223333334444556678999999999
Q ss_pred cccCCCCCCcC-HHHHHcCCCCCCccchhhh
Q 002343 777 LLDPNPDLRPK-AQNVLNHPFFWTADTRLSF 806 (934)
Q Consensus 777 ~L~~DP~~RPT-a~evL~HPff~~~~~~~~f 806 (934)
||+.||.+||+ ++++++||||.+.++...+
T Consensus 254 lL~~dP~~R~s~~~~l~~hp~f~~~~w~~~~ 284 (384)
T 4fr4_A 254 LLEPNPDQRFSQLSDVQNFPYMNDINWDAVF 284 (384)
T ss_dssp HSCSSGGGSCCSHHHHHTSGGGTTCCHHHHH
T ss_pred HhcCCHhHhcccHHHHHcChhhhcCCHHHHH
Confidence 99999999998 8999999999988765443
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=402.07 Aligned_cols=256 Identities=25% Similarity=0.331 Sum_probs=200.5
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++||||+++++++.+.+.+||
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR-VLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHH-HHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 45689999999999999999854 5689999999975311 22334544 6778899999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ |+|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 226 v~e~~~~----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~ 266 (446)
T 4ejn_A 226 VMEYANG----------GELFFHLSR-----------------------------ERVFSEDRARFYGAEIVSALDYLHS 266 (446)
T ss_dssp EECCCSS----------CBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 9996653 444444321 3457888999999999999999998
Q ss_pred -CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 625 -IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 625 -~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+|||||||||+|||++.++ .+||+|||+|+........ ....
T Consensus 267 ~~giiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~-----------------------------------~~~~ 309 (446)
T 4ejn_A 267 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGAT-----------------------------------MKTF 309 (446)
T ss_dssp HTCCCCCCCCGGGEEECSSS--CEEECCCCCCCTTCC----------------------------------------CCS
T ss_pred cCCEEECCCCHHHEEECCCC--CEEEccCCCceeccCCCcc-----------------------------------cccc
Confidence 9999999999999997665 4999999999864332211 1125
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
+||+.|+|||++.+..++.++|||||||++|||++| .+||. .........+......++...++++.+||.+||+.||
T Consensus 310 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP 388 (446)
T 4ejn_A 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDP 388 (446)
T ss_dssp SSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSST
T ss_pred cCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCH
Confidence 799999999999999999999999999999999996 55664 4444444444444444556678999999999999999
Q ss_pred CCCc-----CHHHHHcCCCCCCccchhh
Q 002343 783 DLRP-----KAQNVLNHPFFWTADTRLS 805 (934)
Q Consensus 783 ~~RP-----Ta~evL~HPff~~~~~~~~ 805 (934)
++|| +++|+++||||.+.++...
T Consensus 389 ~~R~~~~~~t~~ell~hp~f~~~~~~~~ 416 (446)
T 4ejn_A 389 KQRLGGGSEDAKEIMQHRFFAGIVWQHV 416 (446)
T ss_dssp TTSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred HHhCCCCCCCHHHHHhCccccCCCHHHH
Confidence 9999 9999999999988766543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=399.94 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=200.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
...+.|.+.+.||+|+||+||++... +++.||||++.+... ...++++..++..++|||||++++++.+.+.+|
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence 34567999999999999999998654 578999999975321 112334445778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||. +|+|.++|... ...+++..++.++.||+.||+|||
T Consensus 151 lV~Ey~~----------gg~L~~~l~~~----------------------------~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 151 LVMDYYV----------GGDLLTLLSKF----------------------------EDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp EEECCCT----------TCBHHHHHHTT----------------------------TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC----------CCcHHHHHHHc----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999654 45555554321 245788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.++ .+||+|||+|+.+....... .+..
T Consensus 193 ~~giiHrDLKp~NILl~~~g--~vkL~DFGla~~~~~~~~~~----------------------------------~~~~ 236 (437)
T 4aw2_A 193 QLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQ----------------------------------SSVA 236 (437)
T ss_dssp HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTSCEE----------------------------------CCSC
T ss_pred hCCeEecccCHHHeeEcCCC--CEEEcchhhhhhcccCCCcc----------------------------------cccc
Confidence 99999999999999997665 49999999998765432211 1125
Q ss_pred CCCCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHH-HHHhhcc----cccccCCCHHHHH
Q 002343 704 YGSSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDA-NIVKDRK----DLFLVEHIPEAVD 772 (934)
Q Consensus 704 ~GT~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~-~i~~~~~----~~~~~~~~~e~~d 772 (934)
+||+.|+|||++. ...++.++|||||||++|||++| .+||.. ...... .++.... +......++++++
T Consensus 237 ~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~d 315 (437)
T 4aw2_A 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG-ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315 (437)
T ss_dssp CSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHH
T ss_pred cCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhC-CCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHH
Confidence 7999999999997 56789999999999999999997 556644 333322 3332221 1112346799999
Q ss_pred HHHHcccCCCCC--CcCHHHHHcCCCCCCccch
Q 002343 773 LFTRLLDPNPDL--RPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 773 LI~~~L~~DP~~--RPTa~evL~HPff~~~~~~ 803 (934)
||.+||+.+|++ ||+++|+++||||.+.++.
T Consensus 316 Li~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~ 348 (437)
T 4aw2_A 316 LIRRLICSREHRLGQNGIEDFKKHPFFSGIDWD 348 (437)
T ss_dssp HHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTT
T ss_pred HHHHHhcccccccCCCCHHHHhCCCccCCCCHH
Confidence 999999998888 9999999999999877664
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=387.32 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=188.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..+.+.|.+.+.||+|+||+||++... +++.||||++...... ...+|+. +++.++||||+++++++.+.+..|+||
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIG-VLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CH-HHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHH-HHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 345677999999999999999998654 5889999999765443 3345555 788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||.+ |+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 128 e~~~~----------~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~ 168 (349)
T 2w4o_A 128 ELVTG----------GELFDRIVE-----------------------------KGYYSERDAADAVKQILEAVAYLHENG 168 (349)
T ss_dssp CCCCS----------CBHHHHHTT-----------------------------CSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 97653 344333321 234678899999999999999999999
Q ss_pred CcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 627 LIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 627 IVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|+||||||+|||++. +....+||+|||+++....... ....+|
T Consensus 169 ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------~~~~~g 212 (349)
T 2w4o_A 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL------------------------------------MKTVCG 212 (349)
T ss_dssp CCCCCCCGGGEEESSSSTTCCEEECCCC----------------------------------------------------
T ss_pred eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc------------------------------------cccccC
Confidence 999999999999974 2234699999999986543211 011469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hH-HH-HHHhhcccc---cccCCCHHHHHHHHHccc
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ER-DA-NIVKDRKDL---FLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~-~~-~i~~~~~~~---~~~~~~~e~~dLI~~~L~ 779 (934)
|+.|+|||++.+..++.++|||||||++|||++| ..||.... .. .. .+....... .....++++.+||.+||+
T Consensus 213 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (349)
T 2w4o_A 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG-FEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIV 291 (349)
T ss_dssp CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSC
T ss_pred CCCccCHHHhcCCCCCcccchHHHHHHHHHHHhC-CCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHcc
Confidence 9999999999999999999999999999999997 55554332 22 22 222222111 123467899999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCCccc
Q 002343 780 PNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.||++|||+.++|+||||.....
T Consensus 292 ~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 292 LDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp SSGGGSCCHHHHHHSTTTTSTTC
T ss_pred CChhhCcCHHHHhcCcccCCCcc
Confidence 99999999999999999976554
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=377.25 Aligned_cols=260 Identities=20% Similarity=0.312 Sum_probs=204.2
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---------hhHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+. ++..++||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS-ILRQVLHHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHH-HHHhCCCCCcceEEEEEec
Confidence 45678899999999999999999855 468999999997542 233556665 7788999999999999999
Q ss_pred CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+..|+|||+|.+ +|.+++ .. ...+++.+++.++.||+.
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~ 126 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFL-----------AQ-----------------------------KESLSEEEATSFIKQILD 126 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHH-----------HT-----------------------------CSCEEHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHH
Confidence 9999999997753 554444 21 234577889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCC--ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~--~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
||+|||++||+||||||+|||++.++. ..+||+|||+++........
T Consensus 127 aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------- 175 (321)
T 2a2a_A 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF------------------------------- 175 (321)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC-------------------------------
T ss_pred HHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc-------------------------------
Confidence 999999999999999999999976652 15999999999876543211
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccc----cccCCCHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDL----FLVEHIPEA 770 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~----~~~~~~~e~ 770 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||... .......+...... .....++++
T Consensus 176 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 249 (321)
T 2a2a_A 176 -----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249 (321)
T ss_dssp -----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred -----cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhcccccChhhhcccCHHH
Confidence 114699999999999999999999999999999999997 5566443 33332222222111 123567899
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhh
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSF 806 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~f 806 (934)
.+||.+||+.||++|||+.|+++||||...+.....
T Consensus 250 ~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~~~~~ 285 (321)
T 2a2a_A 250 KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAM 285 (321)
T ss_dssp HHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhcCccccCCCccccc
Confidence 999999999999999999999999999876654433
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=384.00 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=197.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++...... ...+|+. +++.++||||+++++++.+.+..|+|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS-LLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHH-HHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHH-HHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 3588899999999999999865 47899999998654322 2235665 7788999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||+++|.+++... ...+++.+++.++.||+.||+|||++||
T Consensus 81 ~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 81 YLDKDLKQYLDDC---------------------------------------GNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCSEEHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ccccCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 9988776665221 2346788899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
+||||||+|||++.++. +||+|||+|+........ ....+||+
T Consensus 122 vH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~-----------------------------------~~~~~~t~ 164 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKT-----------------------------------YDNEVVTL 164 (324)
T ss_dssp EESSCCGGGEEECTTCC--EEECSSSEEECC-----------------------------------------------CG
T ss_pred cCCCcCHHHEEECCCCC--EEEccCcccccccCCccc-----------------------------------cccccCcc
Confidence 99999999999976654 999999999865432111 01146899
Q ss_pred ccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcc---c---------------------
Q 002343 708 GWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRK---D--------------------- 760 (934)
Q Consensus 708 ~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~---~--------------------- 760 (934)
.|+|||++.+ ..++.++|||||||++|+|++| .+||...... ... +..... .
T Consensus 165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (324)
T 3mtl_A 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYR 243 (324)
T ss_dssp GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCC
T ss_pred cccChhhhcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccccc
Confidence 9999999986 5689999999999999999996 6777554322 221 111000 0
Q ss_pred -----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhhhhhcc
Q 002343 761 -----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSD 812 (934)
Q Consensus 761 -----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl~~~sd 812 (934)
......++++.+||.+||+.||++|||++|+|+||||.+...+...+.+...
T Consensus 244 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~ 300 (324)
T 3mtl_A 244 AEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTS 300 (324)
T ss_dssp CCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTTSC
T ss_pred chhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCCCc
Confidence 0012346789999999999999999999999999999877766555544443
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=396.74 Aligned_cols=255 Identities=25% Similarity=0.303 Sum_probs=197.8
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHh------CCCCceeEEEEEEec
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIAS------DQHPNIVRWYGVESD 538 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~------l~HpNIV~l~g~~~~ 538 (934)
...+..+|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++. .+|+||+++++++..
T Consensus 92 ~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR-ILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred CCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHH-HHHHHhhccccCCcCEEEEEeeccc
Confidence 356778899999999999999999854 5689999999975432 33445554 3333 278899999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+.+|+|||+|.++|.+++... ...++++..++.++.||+.|
T Consensus 171 ~~~~~lv~e~~~~~L~~~l~~~--------------------------------------~~~~~~~~~~~~i~~qi~~a 212 (429)
T 3kvw_A 171 RNHICMTFELLSMNLYELIKKN--------------------------------------KFQGFSLPLVRKFAHSILQC 212 (429)
T ss_dssp TTEEEEEECCCCCBHHHHHHHT--------------------------------------TTCCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCCHHHHHHhc--------------------------------------cCCCCCHHHHHHHHHHHHHH
Confidence 9999999999988777766321 12457888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++|||||||||+|||++.++...+||+|||+|+.......
T Consensus 213 L~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~----------------------------------- 257 (429)
T 3kvw_A 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY----------------------------------- 257 (429)
T ss_dssp HHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-----------------------------------
T ss_pred HHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCccc-----------------------------------
Confidence 999999999999999999999877654599999999975432211
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhc--cc--------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDR--KD-------------- 760 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~--~~-------------- 760 (934)
..+||+.|+|||++.+..++.++|||||||++|||++| .+||...... .. .++... +.
T Consensus 258 ---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG-~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~ 333 (429)
T 3kvw_A 258 ---TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV 333 (429)
T ss_dssp ---SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHB
T ss_pred ---ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhcc
Confidence 14699999999999999999999999999999999997 6677543322 11 111100 00
Q ss_pred ------------------------------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 761 ------------------------------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 761 ------------------------------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
......++++.+||.+||+.||++|||++|+|+||||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~ 413 (429)
T 3kvw_A 334 SSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413 (429)
T ss_dssp CTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC
T ss_pred CCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhc
Confidence 00011257899999999999999999999999999997
Q ss_pred Cc
Q 002343 799 TA 800 (934)
Q Consensus 799 ~~ 800 (934)
..
T Consensus 414 ~~ 415 (429)
T 3kvw_A 414 RR 415 (429)
T ss_dssp --
T ss_pred cC
Confidence 54
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=368.49 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=196.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
++.+.|.+.+.||+|+||+||++... +++.||||++.... .....+|+..+....+||||+++++++.+.+..|
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34577999999999999999998554 79999999997542 2345667764544449999999999999999999
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||++ +|.+++ .... .....+++.+++.++.||+.||+||
T Consensus 88 lv~e~~~~~~L~~~l-----------~~~~-------------------------~~~~~~~~~~~~~i~~qi~~al~~l 131 (289)
T 1x8b_A 88 IQNEYCNGGSLADAI-----------SENY-------------------------RIMSYFKEAELKDLLLQVGRGLRYI 131 (289)
T ss_dssp EEEECCTTCBHHHHH-----------HHHH-------------------------HHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCcHHHHH-----------Hhhc-------------------------ccccCCCHHHHHHHHHHHHHHHHHH
Confidence 99997754 555544 2210 0124578899999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecC-----------------CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhh
Q 002343 623 HEIGLIHRDLKPQNVLISKD-----------------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLK 685 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d-----------------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (934)
|++||+||||||+|||++.+ ....+||+|||+++.......
T Consensus 132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------- 189 (289)
T 1x8b_A 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---------------------- 189 (289)
T ss_dssp HHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCC----------------------
T ss_pred HhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccc----------------------
Confidence 99999999999999999743 234689999999987643211
Q ss_pred hhhhccccccccceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhccccccc
Q 002343 686 LVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLV 764 (934)
Q Consensus 686 ~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~ 764 (934)
..||+.|+|||++.+. .++.++|||||||++|+|++| .+|+.... ....+........+.
T Consensus 190 -----------------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~~ 250 (289)
T 1x8b_A 190 -----------------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA-EPLPRNGD-QWHEIRQGRLPRIPQ 250 (289)
T ss_dssp -----------------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC-CCCCSSSH-HHHHHHTTCCCCCSS
T ss_pred -----------------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcC-CCCCcchh-HHHHHHcCCCCCCCc
Confidence 3589999999999876 567899999999999999996 44443322 223333333334455
Q ss_pred CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 765 ~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
..++++.+||.+||+.||++|||+.++++||||.+..+
T Consensus 251 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 288 (289)
T 1x8b_A 251 VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288 (289)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-----
T ss_pred ccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhcc
Confidence 67889999999999999999999999999999976543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=394.65 Aligned_cols=257 Identities=24% Similarity=0.361 Sum_probs=197.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
..+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ...++++..++..++|||||++++++.+.+.+||
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 446799999999999999999865 4699999999975321 1123333447788999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||. +|+|.+++... ...+++..++.++.||+.||+|||+
T Consensus 139 VmE~~~----------gg~L~~~l~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~ 180 (412)
T 2vd5_A 139 VMEYYV----------GGDLLTLLSKF----------------------------GERIPAEMARFYLAEIVMAIDSVHR 180 (412)
T ss_dssp EECCCC----------SCBHHHHHHHH----------------------------SSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC----------CCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999664 44554444321 2356888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.++. +||+|||+|+.+........ ...+
T Consensus 181 ~giiHrDLKp~NILld~~g~--vkL~DFGla~~~~~~~~~~~----------------------------------~~~~ 224 (412)
T 2vd5_A 181 LGYVHRDIKPDNILLDRCGH--IRLADFGSCLKLRADGTVRS----------------------------------LVAV 224 (412)
T ss_dssp TTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTSCEEC----------------------------------SSCC
T ss_pred CCeeecccCHHHeeecCCCC--EEEeechhheeccCCCcccc----------------------------------ceec
Confidence 99999999999999976654 99999999987654322110 1157
Q ss_pred CCCccccchhcc-------cCCCcccccccchhhhhHHhhcCCCCCCCC-chhHH-HHHHhhccc----ccccCCCHHHH
Q 002343 705 GSSGWQAPEQLL-------QGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERD-ANIVKDRKD----LFLVEHIPEAV 771 (934)
Q Consensus 705 GT~~Y~APE~l~-------~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~-~~i~~~~~~----~~~~~~~~e~~ 771 (934)
||+.|+|||++. ...++.++|||||||++|||++| .+||.. ..... ..++..... ......+++++
T Consensus 225 Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~ 303 (412)
T 2vd5_A 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG-QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEAR 303 (412)
T ss_dssp SCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHH
T ss_pred cccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC-CCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHH
Confidence 999999999997 35689999999999999999997 566644 33332 233332211 11235678999
Q ss_pred HHHHHcccCCCCCC---cCHHHHHcCCCCCCccch
Q 002343 772 DLFTRLLDPNPDLR---PKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 772 dLI~~~L~~DP~~R---PTa~evL~HPff~~~~~~ 803 (934)
+||.+||+ +|.+| |+++|+++||||.+.++.
T Consensus 304 dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~ 337 (412)
T 2vd5_A 304 DFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWD 337 (412)
T ss_dssp HHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCST
T ss_pred HHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 99999999 99998 599999999999877664
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-42 Score=390.13 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=201.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
+.+.|.+.+.||+|+||+||++.. .+|+.||+|++..... ....+|+. +++.++|||||++++++.+.+..|+||
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS-IMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH-HHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHH-HHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 456799999999999999999855 4689999999976533 23445554 788999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||.+ |+|.+++... ...+++.+++.++.||+.||+|||++|
T Consensus 128 E~~~g----------g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~g 169 (387)
T 1kob_A 128 EFLSG----------GELFDRIAAE----------------------------DYKMSEAEVINYMRQACEGLKHMHEHS 169 (387)
T ss_dssp ECCCC----------CBHHHHTTCT----------------------------TCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EcCCC----------CcHHHHHHhh----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97653 3443333211 234678899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++...+||+|||+|+.+...... ...+||
T Consensus 170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~------------------------------------~~~~gt 213 (387)
T 1kob_A 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV------------------------------------KVTTAT 213 (387)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE------------------------------------EEECSS
T ss_pred eeecccchHHeEEecCCCCceEEEecccceecCCCcce------------------------------------eeeccC
Confidence 99999999999997555456999999999876543211 114699
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcc-c---ccccCCCHHHHHHHHHcccCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRK-D---LFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~-~---~~~~~~~~e~~dLI~~~L~~D 781 (934)
+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+.... . ......++++.+||.+||+.|
T Consensus 214 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 292 (387)
T 1kob_A 214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG-LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKE 292 (387)
T ss_dssp GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSS
T ss_pred CCccCchhccCCCCCCcccEeeHhHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999996 66665433 22222222221 1 112345789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCcc
Q 002343 782 PDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~~ 801 (934)
|++|||+.|+|+||||....
T Consensus 293 P~~Rpt~~ell~hp~~~~~~ 312 (387)
T 1kob_A 293 PRKRLTVHDALEHPWLKGDH 312 (387)
T ss_dssp GGGSCCHHHHHTSTTTSSCC
T ss_pred hhHCcCHHHHhhCccccCCc
Confidence 99999999999999997654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=387.41 Aligned_cols=253 Identities=26% Similarity=0.345 Sum_probs=199.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ...+|+..+.+..+|||||++++++.+++.+|+||||
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 4567799999999999999999855 4689999999976543 2456777666666899999999999999999999997
Q ss_pred ccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 549 c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
|.+ +|.+++ .. ...+++.+++.++.||+.||+|||++||
T Consensus 98 ~~gg~L~~~i-----------~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~gi 137 (342)
T 2qr7_A 98 MKGGELLDKI-----------LR-----------------------------QKFFSEREASAVLFTITKTVEYLHAQGV 137 (342)
T ss_dssp CCSCBHHHHH-----------HT-----------------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CCCCcHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 764 444433 21 2346788999999999999999999999
Q ss_pred cccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 628 IHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 628 VHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
+||||||+|||+..+. ...+||+|||+|+.+....... ...+|
T Consensus 138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------~~~~g 182 (342)
T 2qr7_A 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL-----------------------------------MTPCY 182 (342)
T ss_dssp ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB-----------------------------------CCSSC
T ss_pred EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce-----------------------------------eccCC
Confidence 9999999999985432 2359999999998765432111 12579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc----hhHHHHHHhhcccc----cccCCCHHHHHHHHHc
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERDANIVKDRKDL----FLVEHIPEAVDLFTRL 777 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----~~~~~~i~~~~~~~----~~~~~~~e~~dLI~~~ 777 (934)
|+.|+|||++.+..++.++|||||||++|+|++| .+||... .......+...... .+...++++++||.+|
T Consensus 183 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 261 (342)
T 2qr7_A 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG-YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKM 261 (342)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHH
T ss_pred CccccCHHHhcCCCCCCccCeeeHhHHHHHHhcC-CCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHH
Confidence 9999999999988899999999999999999996 6677532 22222222222211 1234678999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCC
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~ 799 (934)
|+.||++|||+.++++||||..
T Consensus 262 L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 262 LHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp TCSSTTTSCCHHHHTTSHHHHT
T ss_pred CCCChhHCcCHHHHhcCCeecC
Confidence 9999999999999999999954
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=382.26 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=196.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec--------
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD-------- 538 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-------- 538 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHH-HHHHCCCTTBCCEEEEEEEC-------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHH-HHHhccCCCcccHhheeeccccccccC
Confidence 5688999999999999999865 5789999999854332 34567776 7788999999999999887
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+..|+|||||+++|.+.+... ...+++.+++.++.||+.|
T Consensus 96 ~~~~~lv~e~~~~~l~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~~ 136 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLLSNV---------------------------------------LVKFTLSEIKRVMQMLLNG 136 (351)
T ss_dssp -CEEEEEEECCSEEHHHHHHCT---------------------------------------TSCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccCCCHHHHHhhc---------------------------------------cCCCCHHHHHHHHHHHHHH
Confidence 4579999999988766655211 2346888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+|+.+..........
T Consensus 137 l~~LH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~------------------------------ 184 (351)
T 3mi9_A 137 LYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNR------------------------------ 184 (351)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCCCSSSSCCC------------------------------
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCCC--CEEEccchhcccccccccccccc------------------------------
Confidence 9999999999999999999997665 49999999998765432221111
Q ss_pred eeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc----cccccc--------
Q 002343 699 FFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR----KDLFLV-------- 764 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~----~~~~~~-------- 764 (934)
.+..+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .....+... ......
T Consensus 185 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 262 (351)
T 3mi9_A 185 -YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR-SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 262 (351)
T ss_dssp -CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGG
T ss_pred -cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChhhccccccchhh
Confidence 112568999999999976 4579999999999999999996 666655432 222211110 000000
Q ss_pred --------------------CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 765 --------------------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 765 --------------------~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
..++++.+||.+||+.||++|||++|+|+||||++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 263 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319 (351)
T ss_dssp TSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred cccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence 0156799999999999999999999999999997643
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=374.95 Aligned_cols=249 Identities=27% Similarity=0.413 Sum_probs=196.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..|...+.||+|+||+||++... +|+.||||++..... +...+|+. +++.++||||+++++++...+..|+||||
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV-IMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHH-HHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 34677789999999999998654 799999999865432 34556665 78889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++. ...+++.+++.++.||+.||+|||++||+
T Consensus 124 ~~~----------~~L~~~l~------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 124 LQG----------GALTDIVS------------------------------QVRLNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp CCS----------CBHHHHHT------------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCC----------CCHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 653 44433332 23467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++.+....... ....||+.
T Consensus 164 H~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~gt~~ 206 (321)
T 2c30_A 164 HRDIKSDSILLTLDG--RVKLSDFGFCAQISKDVPKR-----------------------------------KSLVGTPY 206 (321)
T ss_dssp CCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCB-----------------------------------CCCCSCGG
T ss_pred cCCCCHHHEEECCCC--cEEEeeeeeeeecccCcccc-----------------------------------ccccCCcc
Confidence 999999999997665 49999999998765432211 11469999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccc---cccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDL---FLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~---~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+|||++.+..++.++|||||||++|+|++| .+||.. ........+...... .....++++.+||.+||+.||++
T Consensus 207 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 285 (321)
T 2c30_A 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDG-EPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285 (321)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTT
T ss_pred ccCHhhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhh
Confidence 9999999999999999999999999999997 556544 333333323222211 12345789999999999999999
Q ss_pred CcCHHHHHcCCCCCCc
Q 002343 785 RPKAQNVLNHPFFWTA 800 (934)
Q Consensus 785 RPTa~evL~HPff~~~ 800 (934)
|||+.++++||||...
T Consensus 286 Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 286 RATAQELLDHPFLLQT 301 (321)
T ss_dssp SCCHHHHHTSGGGGGC
T ss_pred CcCHHHHhcChhhccC
Confidence 9999999999999654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=381.71 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=197.7
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
-+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++|||||++++++.+++..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC-INKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHH-HHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 35689999999999999999855 4789999999865432 23445554 788899999999999999999999999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||.+ +|.+++. ....+++.+++.++.||+.||+|||++
T Consensus 85 e~~~~~~L~~~l~----------------------------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~ 124 (323)
T 3tki_A 85 EYCSGGELFDRIE----------------------------------------PDIGMPEPDAQRFFHQLMAGVVYLHGI 124 (323)
T ss_dssp ECCTTEEGGGGSB----------------------------------------TTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCCCcHHHHHh----------------------------------------hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 98864 5555441 123468889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+++.+........ ....+|
T Consensus 125 givH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~~~---------------------------------~~~~~g 169 (323)
T 3tki_A 125 GITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRERL---------------------------------LNKMCG 169 (323)
T ss_dssp TEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEECC---------------------------------BCSCCS
T ss_pred CccccccchHHEEEeCCCC--EEEEEeeccceeccCCcccc---------------------------------cCCCcc
Confidence 9999999999999976654 99999999987643321110 112579
Q ss_pred CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhH--HHHH-Hhhcc-cccccCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFER--DANI-VKDRK-DLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i-~~~~~-~~~~~~~~~e~~dLI~~~L~~ 780 (934)
|+.|+|||++.+..+ +.++|||||||++|+|++| .+||...... .... ..... .......++++.+||.+||+.
T Consensus 170 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 248 (323)
T 3tki_A 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVE 248 (323)
T ss_dssp CGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHS-SCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCS
T ss_pred CcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhC-CCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccC
Confidence 999999999988776 8899999999999999996 7777543322 1111 11111 112245678999999999999
Q ss_pred CCCCCcCHHHHHcCCCCCCcc
Q 002343 781 NPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~~~~ 801 (934)
||++|||+.|+++||||....
T Consensus 249 dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 249 NPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp STTTSCCHHHHTTCTTTTCCC
T ss_pred ChhhCcCHHHHhhChhhcccc
Confidence 999999999999999997643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=393.78 Aligned_cols=278 Identities=23% Similarity=0.314 Sum_probs=196.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC---
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--- 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--- 539 (934)
..+.++|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++|||||++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~ 100 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT-ILNRLKSDYIIRLYDLIIPDDLL 100 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCTT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHH-HHHHcCCCCcceEEEEEecCCCC
Confidence 45678899999999999999999854 5688999999975432 24556765 78889999999999999876
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+.+|+|||+|+++|.+++.. ...+++.+++.++.||+.
T Consensus 101 ~~~~~~lv~e~~~~~L~~~~~~----------------------------------------~~~l~~~~~~~i~~qil~ 140 (432)
T 3n9x_A 101 KFDELYIVLEIADSDLKKLFKT----------------------------------------PIFLTEEHIKTILYNLLL 140 (432)
T ss_dssp TCCCEEEEEECCSEEHHHHHHS----------------------------------------SCCCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEEecCCcCHHHHHhc----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 57999999988877666521 234688899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+|+.................. ..........
T Consensus 141 aL~~LH~~givHrDlkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 205 (432)
T 3n9x_A 141 GENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINSEKDTNIVNDLEENE-------------EPGPHNKNLK 205 (432)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEEC---------------------------------------
T ss_pred HHHHHHHCCCCCCCCCHHHeEECCCC--CEEEccCCCcccccccccccccccccccc-------------cccccccchh
Confidence 99999999999999999999997665 49999999999875432211000000000 0000000000
Q ss_pred ceeecCCCCCccccchhc-ccCCCcccccccchhhhhHHhhcC----------CCCCCCCch------------------
Q 002343 698 LFFTVGYGSSGWQAPEQL-LQGRQTRAIDLFSLGCILFFCITG----------GKHPYGESF------------------ 748 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l-~~~~~t~ksDIWSLGvILyeLltG----------g~~Pf~~~~------------------ 748 (934)
...+..+||+.|+|||++ .+..++.++|||||||++|||++| +.++|....
T Consensus 206 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~ 285 (432)
T 3n9x_A 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSN 285 (432)
T ss_dssp -----CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHH
T ss_pred ccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccch
Confidence 123446899999999986 455689999999999999999974 455553211
Q ss_pred hHHH-HH-----------------------Hhhcccc-------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCC
Q 002343 749 ERDA-NI-----------------------VKDRKDL-------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 749 ~~~~-~i-----------------------~~~~~~~-------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff 797 (934)
.... .+ +...... .....++++.+||.+||+.||++|||++|+|+||||
T Consensus 286 ~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f 365 (432)
T 3n9x_A 286 RDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365 (432)
T ss_dssp HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGG
T ss_pred HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhh
Confidence 0000 00 0000000 013457899999999999999999999999999999
Q ss_pred CCccc
Q 002343 798 WTADT 802 (934)
Q Consensus 798 ~~~~~ 802 (934)
.....
T Consensus 366 ~~~~~ 370 (432)
T 3n9x_A 366 KDVRK 370 (432)
T ss_dssp TTTCC
T ss_pred hhccC
Confidence 76543
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=385.56 Aligned_cols=251 Identities=25% Similarity=0.341 Sum_probs=189.4
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++|||||++++++.+.+..|+||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREII-NHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHH-HHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 46799999999999999999855 4789999999975432 45566765 77889999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++.. ...+++.+++.++.||+.||+|||++||+
T Consensus 98 ~~~----------~~L~~~l~~-----------------------------~~~~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 98 ASG----------GELYERICN-----------------------------AGRFSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp CCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 653 344433321 34578889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++...+||+|||+|+........ ...+||+.
T Consensus 139 H~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------~~~~gt~~ 182 (361)
T 3uc3_A 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP------------------------------------KSTVGTPA 182 (361)
T ss_dssp SCCCCGGGEEECSSSSCCEEECCCCCC---------------------------------------------------CT
T ss_pred cCCCCHHHEEEcCCCCceEEEeecCccccccccCCC------------------------------------CCCcCCCC
Confidence 999999999997666556999999999743321110 11469999
Q ss_pred cccchhcccCCCccc-ccccchhhhhHHhhcCCCCCCCCchh-----HHHHHHhhccccc--ccCCCHHHHHHHHHcccC
Q 002343 709 WQAPEQLLQGRQTRA-IDLFSLGCILFFCITGGKHPYGESFE-----RDANIVKDRKDLF--LVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 709 Y~APE~l~~~~~t~k-sDIWSLGvILyeLltGg~~Pf~~~~~-----~~~~i~~~~~~~~--~~~~~~e~~dLI~~~L~~ 780 (934)
|+|||++.+..++.+ +|||||||++|+|++| .+||..... .....+....... ....++++++||.+||+.
T Consensus 183 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 261 (361)
T 3uc3_A 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG-AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVA 261 (361)
T ss_dssp TSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHS-SCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCS
T ss_pred cCChhhhcCCCCCCCeeeeehhHHHHHHHHhC-CCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccC
Confidence 999999988887554 9999999999999996 677754321 1122122111111 224578999999999999
Q ss_pred CCCCCcCHHHHHcCCCCCC
Q 002343 781 NPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~~ 799 (934)
||++|||+.|+++||||..
T Consensus 262 dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 262 DPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp CTTTSCCHHHHHTSHHHHT
T ss_pred ChhHCcCHHHHHhCcchhc
Confidence 9999999999999999944
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=375.60 Aligned_cols=262 Identities=23% Similarity=0.337 Sum_probs=190.9
Q ss_pred ecceEEEe-eeecccCcEEEEEEE-EecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 471 IGKLVVFN-KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~-~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.+.|.+. +.||+|+||+||++. ..+++.||||++.... .+...+|+..+.+..+||||+++++++.+.+..|+|
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 34567764 789999999999985 4579999999997543 245677887555557899999999999999999999
Q ss_pred Eeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||. ++|.+++ .. ...+++.+++.++.||+.||+|||+
T Consensus 90 ~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~ 129 (316)
T 2ac3_A 90 FEKMRGGSILSHI-----------HK-----------------------------RRHFNELEASVVVQDVASALDFLHN 129 (316)
T ss_dssp EECCTTCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHH-----------hc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99775 3444443 21 2346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCC-ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 625 IGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~-~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+||+||||||+|||++.++. ..+||+|||+++.............. .....
T Consensus 130 ~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~----------------------------~~~~~ 181 (316)
T 2ac3_A 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP----------------------------ELLTP 181 (316)
T ss_dssp TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------------------------------------------
T ss_pred CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccc----------------------------ccccc
Confidence 99999999999999976543 34899999999876533211110000 01124
Q ss_pred CCCCccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCch----------------hHHHHHHhhccccc
Q 002343 704 YGSSGWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGESF----------------ERDANIVKDRKDLF 762 (934)
Q Consensus 704 ~GT~~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----------------~~~~~i~~~~~~~~ 762 (934)
+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||.... ......+.......
T Consensus 182 ~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 260 (316)
T 2ac3_A 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-YPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEF 260 (316)
T ss_dssp CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHS-SCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHC-CCCCcccccccccccccccchhHHHHHHHHHhccCccc
Confidence 69999999999975 4578999999999999999996 66775431 11112222221111
Q ss_pred c----cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 763 L----VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 763 ~----~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+ ...++++++||.+||+.||++|||+.|+++||||....
T Consensus 261 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 1 24578999999999999999999999999999997543
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=382.05 Aligned_cols=253 Identities=24% Similarity=0.391 Sum_probs=193.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCC--CceeEEEEEEecCCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQH--PNIVRWYGVESDQDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~~~~~ 542 (934)
..++.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. ++..++| |||+++++++.+++..
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHH-HHHhhhhcCCceEEEeeeEeeCCEE
Confidence 34678999999999999999998777899999999875432 23455665 5566655 9999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||++.++|.+++.. ...+++.+++.++.||+.||+||
T Consensus 85 ~lv~e~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~al~~l 124 (343)
T 3dbq_A 85 YMVMECGNIDLNSWLKK----------------------------------------KKSIDPWERKSYWKNMLEAVHTI 124 (343)
T ss_dssp EEEECCCSEEHHHHHHH----------------------------------------SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999666666666521 24567888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++ ++ .+||+|||+|+.+........ .+.
T Consensus 125 H~~~iiHrDikp~NIll~-~~--~~kl~DFG~a~~~~~~~~~~~---------------------------------~~~ 168 (343)
T 3dbq_A 125 HQHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQPDTTSVV---------------------------------KDS 168 (343)
T ss_dssp HHTTCCCCCCCGGGEEEE-TT--EEEECCCSSSCCC--------------------------------------------
T ss_pred HhCCeecCCCCcceEEEE-CC--cEEEeecccccccCccccccc---------------------------------CCC
Confidence 999999999999999996 33 499999999987654322110 112
Q ss_pred CCCCCccccchhccc-----------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH---HHHHhhc-ccccccCCC
Q 002343 703 GYGSSGWQAPEQLLQ-----------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD---ANIVKDR-KDLFLVEHI 767 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~-----------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~---~~i~~~~-~~~~~~~~~ 767 (934)
.+||+.|+|||++.+ ..++.++|||||||++|||++| .+||....... ..++... ....+...+
T Consensus 169 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T 3dbq_A 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPE 247 (343)
T ss_dssp -CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHS-SCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred CcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhC-CCcchhhhhHHHHHHHHhcCCcccCCcccCC
Confidence 569999999999965 6789999999999999999996 77776543322 2222211 222333445
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+++.+||.+||+.||++|||+.|+|+||||...
T Consensus 248 ~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 248 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred HHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence 789999999999999999999999999999643
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=367.22 Aligned_cols=257 Identities=24% Similarity=0.361 Sum_probs=200.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~ 81 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQEESFHY 81 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHH-HHHHcCCCCcCeEEEEEEcCCEEE
Confidence 3567799999999999999999854 5689999999865432 23345554 778889999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||+|.+ |+|.+++.. ...+++.+++.++.||+.||+|||
T Consensus 82 ~v~e~~~~----------~~l~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~lH 122 (284)
T 3kk8_A 82 LVFDLVTG----------GELFEDIVA-----------------------------REFYSEADASHCIQQILESIAYCH 122 (284)
T ss_dssp EEECCCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997654 333333321 345678899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCC-ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~-~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++||+||||||+|||++.++. ..+||+|||++......... ..
T Consensus 123 ~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------~~ 166 (284)
T 3kk8_A 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW------------------------------------HG 166 (284)
T ss_dssp HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC------------------------------------CC
T ss_pred HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc------------------------------------cC
Confidence 999999999999999975432 45899999999766543211 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhccccc----ccCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLF----LVEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~----~~~~~~e~~dLI~~~ 777 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.. ........+....... ....++++.+||.+|
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 245 (284)
T 3kk8_A 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245 (284)
T ss_dssp SCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred CCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHC-CCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHH
Confidence 4699999999999999999999999999999999997 555544 3333333333222111 134578999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
|+.||++|||+.|+++||||.+....
T Consensus 246 l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 246 LTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp SCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred cccChhhCCCHHHHhcCccccCChhH
Confidence 99999999999999999999765543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=379.44 Aligned_cols=265 Identities=22% Similarity=0.379 Sum_probs=191.1
Q ss_pred cceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC------
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~------ 540 (934)
-+.|.+.+.||+|+||+||++... +|+.||||++..... +...+|+. +++.++|||||++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK-ALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHH-HHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHH-HHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 356889999999999999998654 799999999974332 34456665 888899999999999986543
Q ss_pred ---------------------------------------------------eEEEEEecccCChhhhHHhhcCCHHHHHh
Q 002343 541 ---------------------------------------------------FVYLSLERCTCSLNDLIYVLSGSFEEQLN 569 (934)
Q Consensus 541 ---------------------------------------------------~~yLVmE~c~~sL~dli~~~~GsL~~~L~ 569 (934)
+.|+|||||.+ |+|.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~----------~~L~~~~~ 153 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRK----------ENLKDWMN 153 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCS----------SCHHHHHH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCC----------CCHHHHHh
Confidence 48999997764 34444433
Q ss_pred hhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEE
Q 002343 570 AKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649 (934)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKL 649 (934)
.... ....++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 154 ~~~~--------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL 205 (332)
T 3qd2_B 154 RRCS--------------------------LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKV 205 (332)
T ss_dssp TCCS--------------------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEE
T ss_pred cccC--------------------------ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC--CEEE
Confidence 2110 11234567889999999999999999999999999999997665 4999
Q ss_pred eeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccch
Q 002343 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSL 729 (934)
Q Consensus 650 sDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSL 729 (934)
+|||+++.+............ ..........+||+.|+|||++.+..++.++|||||
T Consensus 206 ~DfG~a~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 262 (332)
T 3qd2_B 206 GDFGLVTAMDQDEEEQTVLTP-----------------------MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262 (332)
T ss_dssp CCCTTCEECSCC-------------------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHH
T ss_pred eecCcccccccchhhcccccc-----------------------ccccccccccCCCcCccChHHhcCCCCcchhhHHHH
Confidence 999999987654321110000 000001122579999999999999999999999999
Q ss_pred hhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 730 GCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 730 GvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||++|||++| ..|+...............+......++++.+||.+||+.||++|||+.|+++||||.+
T Consensus 263 G~il~el~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 263 GLILFELLYS-FSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHHHHHHSC-CCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHHHHHHHHc-CCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 9999999996 44443322222222222222223344678899999999999999999999999999964
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=381.42 Aligned_cols=247 Identities=28% Similarity=0.384 Sum_probs=177.2
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCChhhhH
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLI 557 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~sL~dli 557 (934)
+.||+|+||+||++.. .+|+.||||++.+.......+|+..+....+|||||++++++.+++..|+|||||.+
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~------ 90 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG------ 90 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS------
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC------
Confidence 6899999999999855 468999999998766666777887444444599999999999999999999997754
Q ss_pred HhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeE
Q 002343 558 YVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNV 637 (934)
Q Consensus 558 ~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NI 637 (934)
|+|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+||
T Consensus 91 ----~~L~~~l~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 137 (325)
T 3kn6_A 91 ----GELFERIKK-----------------------------KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENL 137 (325)
T ss_dssp ----CBHHHHHHH-----------------------------CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred ----CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHE
Confidence 344443321 34578889999999999999999999999999999999
Q ss_pred EEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcc
Q 002343 638 LISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLL 716 (934)
Q Consensus 638 Ll~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~ 716 (934)
|++.++ ...+||+|||+++......... ...+||+.|+|||++.
T Consensus 138 ll~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------~~~~~t~~y~aPE~~~ 182 (325)
T 3kn6_A 138 LFTDENDNLEIKIIDFGFARLKPPDNQPL-----------------------------------KTPCFTLHYAAPELLN 182 (325)
T ss_dssp EEEC----CEEEECCCTTCEECCC--------------------------------------------------------
T ss_pred EEecCCCcccEEEeccccceecCCCCCcc-----------------------------------cccCCCcCccCHHHhc
Confidence 997643 3469999999998654432111 1146899999999999
Q ss_pred cCCCcccccccchhhhhHHhhcCCCCCCCCchh--------HHHHHHhhccccc----ccCCCHHHHHHHHHcccCCCCC
Q 002343 717 QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--------RDANIVKDRKDLF----LVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 717 ~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--------~~~~i~~~~~~~~----~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+..++.++|||||||++|+|++| .+||..... .....+....... ....++++++||.+||+.||++
T Consensus 183 ~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 261 (325)
T 3kn6_A 183 QNGYDESCDLWSLGVILYTMLSG-QVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNK 261 (325)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHS-SCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTT
T ss_pred CCCCCCccchHHHHHHHHHHHhC-CCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhH
Confidence 99999999999999999999996 777754321 1222222221111 1245789999999999999999
Q ss_pred CcCHHHHHcCCCCCCc
Q 002343 785 RPKAQNVLNHPFFWTA 800 (934)
Q Consensus 785 RPTa~evL~HPff~~~ 800 (934)
|||++++++||||.+.
T Consensus 262 Rpt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 262 RLKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCCTTTSTTCGGGCTT
T ss_pred CCCHHHHhcChhhccC
Confidence 9999999999999754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=386.89 Aligned_cols=263 Identities=21% Similarity=0.279 Sum_probs=195.0
Q ss_pred ecceEEEeeeeccc--CcEEEEEEEEe-cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 471 IGKLVVFNKEIAKG--SNGTVVLEGNY-EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 471 i~~~~~~~~~IG~G--sfGtVy~~~~~-~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
-+++|.+.+.||+| +||+||++... +|+.||||++..... +...+|+. +++.++|||||++++++.+++.+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH-VSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHH-HHHhCCCCCCCcEeEEEEECCEE
Confidence 35679999999999 99999998654 699999999975432 22334554 88899999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||. +|+|.+++... ...++++.+++.++.||+.||+||
T Consensus 102 ~lv~e~~~----------~~~L~~~l~~~---------------------------~~~~~~~~~~~~~~~qi~~~l~~L 144 (389)
T 3gni_B 102 WVVTSFMA----------YGSAKDLICTH---------------------------FMDGMNELAIAYILQGVLKALDYI 144 (389)
T ss_dssp EEEEECCT----------TCBHHHHHHHT---------------------------CTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccC----------CCCHHHHHhhh---------------------------cccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999765 33443333211 124578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+|||++.++ .+||+|||++............... ....
T Consensus 145 H~~~ivHrDlkp~NIll~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~----------------------------~~~~ 194 (389)
T 3gni_B 145 HHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQRQRVVHD----------------------------FPKY 194 (389)
T ss_dssp HHTTEECCCCSGGGEEECTTC--CEEECCGGGCEECEETTEECSCBCC----------------------------CCTT
T ss_pred HhCCeecCCCCHHHEEEcCCC--CEEEcccccceeecccccccccccc----------------------------cccc
Confidence 999999999999999997665 4999999998765433211110000 0111
Q ss_pred CCCCCccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhc--------------------
Q 002343 703 GYGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDR-------------------- 758 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~-------------------- 758 (934)
.+||+.|+|||++.+ ..++.++|||||||++|||++| .+||....... ..+....
T Consensus 195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (389)
T 3gni_B 195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG-HVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPS 273 (389)
T ss_dssp CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHS-SCTTTTCCSTTHHHHC------------------------
T ss_pred ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccc
Confidence 469999999999987 5789999999999999999996 67775422111 1111000
Q ss_pred -------------------------ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 759 -------------------------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 759 -------------------------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
........++++.+||.+||+.||++|||+.|+|+||||.....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 274 RSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp --------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred ccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00112334678999999999999999999999999999976543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=391.94 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=190.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~yLV 545 (934)
+++++...+.||+|+||+||++.. .+|+.||||++... ....+|+..+.+..+||||+++++++.. .+++|||
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 344444457899999999999854 46899999998643 4567788767788899999999999875 6789999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||.+ +|.+++ ... ....+++.+++.++.||+.||+|||+
T Consensus 138 ~E~~~gg~L~~~l-----------~~~---------------------------~~~~l~~~~~~~i~~qi~~aL~~LH~ 179 (400)
T 1nxk_A 138 MECLDGGELFSRI-----------QDR---------------------------GDQAFTEREASEIMKSIGEAIQYLHS 179 (400)
T ss_dssp EECCCSEEHHHHH-----------HCC------------------------------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHH-----------HHh---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997764 555444 211 02346888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 625 IGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+|||||||||+|||++.++ ...+||+|||+|+....... .+..
T Consensus 180 ~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------------~~~~ 223 (400)
T 1nxk_A 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS------------------------------------LTTP 223 (400)
T ss_dssp TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------------------------------------
T ss_pred CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCc------------------------------------cccC
Confidence 9999999999999997632 34699999999986543211 0125
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh------HHHHHHhhccccc---ccCCCHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE------RDANIVKDRKDLF---LVEHIPEAVDLF 774 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~------~~~~i~~~~~~~~---~~~~~~e~~dLI 774 (934)
+||+.|+|||++.+..++.++|||||||++|||++| .+||..... ....+........ ....++++.+||
T Consensus 224 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 302 (400)
T 1nxk_A 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 302 (400)
T ss_dssp ---CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHS-SCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred CCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhC-CCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHH
Confidence 699999999999999999999999999999999996 666643321 1122222222111 234678999999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.+||+.||++|||+.++++||||+...
T Consensus 303 ~~~L~~dP~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 303 RNLLKTEPTQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred HHHCCCChhHCcCHHHHhcCccccCCC
Confidence 999999999999999999999997543
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=367.57 Aligned_cols=255 Identities=25% Similarity=0.460 Sum_probs=195.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++.+.+..|+
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIE-VLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHH-HHHhCCCchHHhHHHheecCCeEEE
Confidence 3567899999999999999999854 5689999999875432 34556665 7889999999999999999999999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||.+ +|.+++ .... .....+++..++.++.||+.||+|||
T Consensus 98 v~e~~~~~~L~~~l-----------~~~~-------------------------~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 98 VMETCEGGELLERI-----------VSAQ-------------------------ARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp EECCCSCCBHHHHH-----------HHHH-------------------------HHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcHHHHH-----------Hhhh-------------------------hcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9997764 444443 2110 01356788999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++||+||||||+|||++.+ ....+||+|||+++.+...... ..
T Consensus 142 ~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------~~ 185 (285)
T 3is5_A 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS------------------------------------TN 185 (285)
T ss_dssp HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------------------------------------------
T ss_pred hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccC------------------------------------cC
Confidence 9999999999999999542 2345999999999865442211 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccccc---ccCCCHHHHHHHHHcc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLF---LVEHIPEAVDLFTRLL 778 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~---~~~~~~e~~dLI~~~L 778 (934)
..||+.|+|||++. ..++.++|||||||++|+|++| ..||.... .............. ....++++.+||.+||
T Consensus 186 ~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 263 (285)
T 3is5_A 186 AAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG-CLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQML 263 (285)
T ss_dssp -CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHT
T ss_pred cccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhC-CCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHc
Confidence 46899999999986 5789999999999999999996 66765543 32222222222211 2235789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~ 799 (934)
+.||++|||+.|+|+||||..
T Consensus 264 ~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 264 TKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp CSCTTTSCCHHHHHTSGGGGC
T ss_pred cCChhhCcCHHHHhcCHHhhc
Confidence 999999999999999999964
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=394.03 Aligned_cols=253 Identities=26% Similarity=0.414 Sum_probs=198.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC----------------hhHHHHHHHHHHHhCCCCceeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----------------HDVALKEIQNLIASDQHPNIVR 531 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~----------------~~~~~~Ei~~ll~~l~HpNIV~ 531 (934)
..+++.|.+.+.||+|+||+||++.. .+++.||||++.+.. .+...+|+. +++.++|||||+
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~ 110 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS-LLKSLDHPNIIK 110 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHH-HHHTCCCTTBCC
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHH-HHHhCCCCCCCe
Confidence 35678899999999999999999855 468899999987532 233456665 888999999999
Q ss_pred EEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHH
Q 002343 532 WYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (934)
Q Consensus 532 l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 610 (934)
+++++.+.+..|||||||.+ +|.+++ .. ...+++.+++.
T Consensus 111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l-----------~~-----------------------------~~~~~~~~~~~ 150 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTEFYEGGELFEQI-----------IN-----------------------------RHKFDECDAAN 150 (504)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHH-----------HH-----------------------------HSCCCHHHHHH
T ss_pred EEEEEEcCCEEEEEEecCCCCcHHHHH-----------HH-----------------------------cCCCCHHHHHH
Confidence 99999999999999997764 444433 21 34578889999
Q ss_pred HHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCC-ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhh
Q 002343 611 VTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS-FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689 (934)
Q Consensus 611 i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~-~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (934)
++.||+.||+|||++||+||||||+|||++.++. ..+||+|||+|+.+......
T Consensus 151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------- 205 (504)
T 3q5i_A 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL------------------------- 205 (504)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCB-------------------------
T ss_pred HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCcc-------------------------
Confidence 9999999999999999999999999999976543 36999999999876543211
Q ss_pred ccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccccc----cc
Q 002343 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLF----LV 764 (934)
Q Consensus 690 ~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~----~~ 764 (934)
...+||+.|+|||++. +.++.++|||||||++|+|++| .+||.... ......+......+ ..
T Consensus 206 -----------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 272 (504)
T 3q5i_A 206 -----------RDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG-YPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272 (504)
T ss_dssp -----------CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCHHHHT
T ss_pred -----------ccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCccccC
Confidence 1146999999999987 4699999999999999999996 66776543 33333333322211 23
Q ss_pred CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 765 ~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
..++++++||.+||+.||.+|||+.|+|+||||...
T Consensus 273 ~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 273 NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 567899999999999999999999999999999643
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=387.12 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=191.7
Q ss_pred ceEEE--eeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVF--NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~--~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
..|.+ .+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+.+..||||
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~lv~ 165 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEIS-VMNQLDHANLIQLYDAFESKNDIVLVM 165 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHH-HHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 34444 56899999999999854 5689999999976542 33455655 788899999999999999999999999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||++ +|.+++ ... ...+++.+++.++.||+.||+|||++
T Consensus 166 E~~~~~~L~~~l-----------~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~ 206 (373)
T 2x4f_A 166 EYVDGGELFDRI-----------IDE----------------------------SYNLTELDTILFMKQICEGIRHMHQM 206 (373)
T ss_dssp ECCTTCEEHHHH-----------HHT----------------------------GGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 97753 444443 211 12357788899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||+..+....+||+|||+++.+...... ...+|
T Consensus 207 ~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------------~~~~g 250 (373)
T 2x4f_A 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL------------------------------------KVNFG 250 (373)
T ss_dssp TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC------------------------------------CCCCS
T ss_pred CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc------------------------------------ccccC
Confidence 999999999999996555557999999999876543211 11469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHH-HHHHhhcccc---cccCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERD-ANIVKDRKDL---FLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~-~~i~~~~~~~---~~~~~~~e~~dLI~~~L~~ 780 (934)
|+.|+|||++.+..++.++|||||||++|||++| .+||.. ..... ..+....... .....++++++||.+||+.
T Consensus 251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 329 (373)
T 2x4f_A 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG-LSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK 329 (373)
T ss_dssp SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCS
T ss_pred CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCC
Confidence 9999999999998999999999999999999997 556644 33322 2333322211 2235678999999999999
Q ss_pred CCCCCcCHHHHHcCCCCCCc
Q 002343 781 NPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~~~ 800 (934)
||.+|||+.|+|+||||.+.
T Consensus 330 dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 330 EKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp SGGGSCCHHHHHHSHHHHCH
T ss_pred ChhhCCCHHHHhcCcCcCCC
Confidence 99999999999999999654
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=379.71 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=198.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..+.|...+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++..|
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 130 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQKLRHPNTIQYRGCYLREHTAW 130 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCeEE
Confidence 446789999999999999999854 6799999999965421 23445665 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
||||||.++|.+++... ...+++.+++.++.||+.||+|||
T Consensus 131 lv~e~~~g~l~~~l~~~---------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH 171 (348)
T 1u5q_A 131 LVMEYCLGSASDLLEVH---------------------------------------KKPLQEVEIAAVTHGALQGLAYLH 171 (348)
T ss_dssp EEEECCSEEHHHHHHHH---------------------------------------TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHh---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999988776665221 245678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 172 ~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~~---------------------------------------~~ 210 (348)
T 1u5q_A 172 SHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPAN---------------------------------------SF 210 (348)
T ss_dssp HTTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSSBC---------------------------------------CC
T ss_pred hCCeeeCCCCHHHEEECCCC--CEEEeeccCceecCCCC---------------------------------------cc
Confidence 99999999999999997665 59999999997654311 14
Q ss_pred CCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCC-chhHH-HHHHhhccc-ccccCCCHHHHHHHHHc
Q 002343 704 YGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERD-ANIVKDRKD-LFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 704 ~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~-~~i~~~~~~-~~~~~~~~e~~dLI~~~ 777 (934)
+||+.|+|||++. ...++.++|||||||++|||++| .+||.. ..... ..+...... ......++++.+||.+|
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 289 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 289 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 6999999999985 56789999999999999999997 555543 32222 223332222 22334578999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
|+.||++|||++++++||||....
T Consensus 290 l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 290 LQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp TCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred cccChhhCcCHHHHhhChhhhccC
Confidence 999999999999999999996543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=393.15 Aligned_cols=268 Identities=24% Similarity=0.350 Sum_probs=186.9
Q ss_pred eeecceEEE-eeeecccCcEEEEEEEEe---cCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEe--cCCe
Q 002343 469 RRIGKLVVF-NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVES--DQDF 541 (934)
Q Consensus 469 ~~i~~~~~~-~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~--~~~~ 541 (934)
..+.+.|.+ .++||+|+||+||++... +++.||||++..... ....+|+. +++.++|||||++++++. ....
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIA-LLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHH-HHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHH-HHHhcCCCCeeeEeeEEecCCCCe
Confidence 456667776 568999999999998654 578999999976543 45667776 888899999999999995 4778
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|||||||.++|.+++...... . .......+++.+++.++.||+.||+|
T Consensus 95 ~~lv~e~~~~~l~~~~~~~~~~---------~----------------------~~~~~~~l~~~~~~~i~~qi~~al~~ 143 (405)
T 3rgf_A 95 VWLLFDYAEHDLWHIIKFHRAS---------K----------------------ANKKPVQLPRGMVKSLLYQILDGIHY 143 (405)
T ss_dssp EEEEEECCSEEHHHHHHHHHHH---------C-----------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHhccc---------c----------------------ccccccCCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887776321100 0 00012347889999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEec--CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 622 LHEIGLIHRDLKPQNVLISK--DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~--d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
||++|||||||||+|||+.. +....+||+|||+|+.+.........
T Consensus 144 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-------------------------------- 191 (405)
T 3rgf_A 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD-------------------------------- 191 (405)
T ss_dssp HHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-------------------------------------------
T ss_pred HHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCccccc--------------------------------
Confidence 99999999999999999943 22346999999999876542211110
Q ss_pred eecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-----------HHHHHHhhcc---cc---
Q 002343 700 FTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-----------RDANIVKDRK---DL--- 761 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----------~~~~i~~~~~---~~--- 761 (934)
....+||+.|+|||++.+. .++.++|||||||++|+|++| .+||..... ....+..... ..
T Consensus 192 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~ 270 (405)
T 3rgf_A 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWE 270 (405)
T ss_dssp -----CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHS-SCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCG
T ss_pred CCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhC-CCCCCCccccccccccchHHHHHHHHHhhCCCChhhcc
Confidence 1125799999999999874 489999999999999999996 667743211 1111111000 00
Q ss_pred -------------------------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 762 -------------------------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 762 -------------------------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.....++++.+||.+||+.||++|||++|+|+||||....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 271 DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp GGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0011256889999999999999999999999999997643
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=369.39 Aligned_cols=254 Identities=28% Similarity=0.387 Sum_probs=190.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+.|.+.+.||+|+||+||++.. .+|+.||||++..... .....|+..+++..+||||+++++++.+++..|+|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 346789999999999999999855 5789999999975432 23345555567889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+++|.+++... . .....+++.+++.++.||+.||+|||++
T Consensus 85 ~e~~~~~l~~~l~~~-------~-----------------------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (290)
T 3fme_A 85 MELMDTSLDKFYKQV-------I-----------------------------DKGQTIPEDILGKIAVSIVKALEHLHSK 128 (290)
T ss_dssp EECCSEEHHHHHHHH-------H-----------------------------HTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EehhccchHHHHHHH-------H-----------------------------hcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 999988777665210 0 0134678899999999999999999998
Q ss_pred -CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 626 -GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 626 -gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
||+||||||+|||++.++ .+||+|||+|+........ ....
T Consensus 129 ~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~------------------------------------~~~~ 170 (290)
T 3fme_A 129 LSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDDVAK------------------------------------DIDA 170 (290)
T ss_dssp SCCCCCCCSGGGCEECTTC--CEEBCCC---------------------------------------------------C
T ss_pred CCeecCCCCHHHEEECCCC--CEEEeecCCcccccccccc------------------------------------cccC
Confidence 999999999999997655 4999999999876543211 1135
Q ss_pred CCCccccchhc----ccCCCcccccccchhhhhHHhhcCCCCCCCCc---hhHHHHHHhhcc-cccccCCCHHHHHHHHH
Q 002343 705 GSSGWQAPEQL----LQGRQTRAIDLFSLGCILFFCITGGKHPYGES---FERDANIVKDRK-DLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 705 GT~~Y~APE~l----~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~---~~~~~~i~~~~~-~~~~~~~~~e~~dLI~~ 776 (934)
||+.|+|||++ .+..++.++|||||||++|+|++| .+||... ............ .......++++.+||.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 249 (290)
T 3fme_A 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ 249 (290)
T ss_dssp CCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHT-SCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHH
T ss_pred CCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHC-CCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHH
Confidence 89999999996 456789999999999999999996 6777542 122222222222 22233567899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||+.||++|||+.|+++||||..
T Consensus 250 ~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 250 CLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp HTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HhhcChhhCcCHHHHHhCccccc
Confidence 99999999999999999999954
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=384.63 Aligned_cols=248 Identities=27% Similarity=0.417 Sum_probs=189.7
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHH-HHHHCCBTTBCCCSEEECSCSSTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH-HHHhCCCcCCCCceeeEecCCccc
Confidence 4567899999999999999999855 5799999999865332 23456665 788899999999999998763
Q ss_pred ---eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 541 ---~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+|+|||+|+++|.+++. ...+++..++.++.||+.
T Consensus 101 ~~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~l~~~~~~~~~~qi~~ 139 (367)
T 1cm8_A 101 DFTDFYLVMPFMGTDLGKLMK-----------------------------------------HEKLGEDRIQFLVYQMLK 139 (367)
T ss_dssp TCCCCEEEEECCSEEHHHHHH-----------------------------------------HCCCCHHHHHHHHHHHHH
T ss_pred cCceEEEEEecCCCCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 469999988766666552 234677889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+|+......
T Consensus 140 ~L~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~----------------------------------- 182 (367)
T 1cm8_A 140 GLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADSEM----------------------------------- 182 (367)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCSSC-----------------------------------
T ss_pred HHHHHHHCCccccCcCHHHEEEcCCC--CEEEEeeeccccccccc-----------------------------------
Confidence 99999999999999999999997665 49999999998754321
Q ss_pred ceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhh-----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKD----------------- 757 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~----------------- 757 (934)
+..+||+.|+|||++.+ ..++.++|||||||++|||++| .+||.... .... .+...
T Consensus 183 ---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 183 ---TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG-KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp ---CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred ---CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 11468999999999987 6789999999999999999996 66665432 2211 11110
Q ss_pred ------cc-------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 ------RK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 ------~~-------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.+ .......++++.+||.+||+.||++|||++|+|+||||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 00 00123457899999999999999999999999999999754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=384.87 Aligned_cols=253 Identities=24% Similarity=0.396 Sum_probs=193.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCC--CCceeEEEEEEecCCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQ--HPNIVRWYGVESDQDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~--HpNIV~l~g~~~~~~~~ 542 (934)
..++.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. ++..++ |||||++++++...+.+
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~-~l~~l~~~~~~iv~~~~~~~~~~~~ 131 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQYI 131 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHH-HHHHcccCCCeEEEEEEEEecCCEE
Confidence 34567999999999999999998777799999999865432 33456666 555554 69999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||++.++|.+++.. ...+++.+++.++.||+.||+||
T Consensus 132 ~lv~E~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~aL~~l 171 (390)
T 2zmd_A 132 YMVMECGNIDLNSWLKK----------------------------------------KKSIDPWERKSYWKNMLEAVHTI 171 (390)
T ss_dssp EEEEECCSEEHHHHHHH----------------------------------------CSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999655666665521 23456778899999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+|||++ ++ .+||+|||+|+.+........ ...
T Consensus 172 H~~~ivHrDlkp~NIll~-~~--~~kl~DFG~a~~~~~~~~~~~---------------------------------~~~ 215 (390)
T 2zmd_A 172 HQHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQPDTTSVV---------------------------------KDS 215 (390)
T ss_dssp HTTTCCCCCCCGGGEEES-SS--CEEECCCSSSCCC------------------------------------------CC
T ss_pred HHCCeeecCCCHHHEEEE-CC--eEEEEecCccccccCCCcccc---------------------------------CCC
Confidence 999999999999999995 33 499999999987654322110 112
Q ss_pred CCCCCccccchhccc-----------CCCcccccccchhhhhHHhhcCCCCCCCCchhH---HHHHHhhccc-ccccCCC
Q 002343 703 GYGSSGWQAPEQLLQ-----------GRQTRAIDLFSLGCILFFCITGGKHPYGESFER---DANIVKDRKD-LFLVEHI 767 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~-----------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~~i~~~~~~-~~~~~~~ 767 (934)
.+||+.|+|||++.+ ..++.++|||||||++|||++| .+||...... ...++..... ..+...+
T Consensus 216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (390)
T 2zmd_A 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIPE 294 (390)
T ss_dssp SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHS-SCTTTTCCCHHHHHHHHHCTTSCCCCCCCSC
T ss_pred CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHC-CCcchhhhHHHHHHHHHhCccccCCCCccch
Confidence 569999999999975 3689999999999999999996 6777653222 2222222222 2233346
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+++.+||.+||+.||++|||+.|+|+||||...
T Consensus 295 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence 789999999999999999999999999999643
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=385.67 Aligned_cols=258 Identities=27% Similarity=0.360 Sum_probs=198.6
Q ss_pred CceeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecC------C
Q 002343 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQ------D 540 (934)
Q Consensus 467 ~~~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~------~ 540 (934)
.+......|.+.+.||+|+||+||++....+..||+|++..... ...+|+. +++.++|||||++++++... .
T Consensus 34 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-~~~~E~~-il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-FKNRELQ-IMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp SCCEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-SCCHHHH-HHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred CCCcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-hHHHHHH-HHHhCCCCCcceEEEEEEecCCCCCce
Confidence 34566788999999999999999999877777799998865432 2235665 78899999999999998543 3
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
++|+|||||.+++.+.+.. + ......+++..++.++.||+.||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~-------~-----------------------------~~~~~~~~~~~~~~~~~qi~~aL~ 155 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRH-------Y-----------------------------AKLKQTMPMLLIKLYMYQLLRSLA 155 (394)
T ss_dssp EEEEEEECCSEEHHHHHHH-------H-----------------------------HHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeccCccHHHHHHH-------H-----------------------------HhhcCCCCHHHHHHHHHHHHHHHH
Confidence 4899999998876554321 0 001356788999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEe-cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 621 HLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~-~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
|||++||+||||||+|||++ .++ .+||+|||+|+.+.......
T Consensus 156 ~LH~~~ivHrDlkp~Nill~~~~~--~~kL~DFG~a~~~~~~~~~~---------------------------------- 199 (394)
T 4e7w_A 156 YIHSIGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIAGEPNV---------------------------------- 199 (394)
T ss_dssp HHHHTTEECSCCSGGGEEEETTTT--EEEECCCTTCEECCTTCCCC----------------------------------
T ss_pred HHHHCCccCCCCCHHHEEEcCCCC--cEEEeeCCCcccccCCCCCc----------------------------------
Confidence 99999999999999999997 343 59999999998765432211
Q ss_pred eecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh-H-HHHHHhhc------------c-----
Q 002343 700 FTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE-R-DANIVKDR------------K----- 759 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~-~~~i~~~~------------~----- 759 (934)
..+||+.|+|||++.+. .++.++|||||||++|||++| .+||..... . ...+++.. .
T Consensus 200 --~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (394)
T 4e7w_A 200 --SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH 276 (394)
T ss_dssp --SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSS
T ss_pred --ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhh
Confidence 14689999999999765 589999999999999999996 666654322 1 12222110 0
Q ss_pred -----------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 760 -----------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 760 -----------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
..+....++++.+||.+||+.||++|||+.|+++||||....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 277 KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred ccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 011223568999999999999999999999999999997643
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=384.72 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=185.7
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD--- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--- 540 (934)
.+.+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSCCSTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHH-HHHhcCCCCccceEEeeccccccc
Confidence 3457799999999999999999854 5689999999975422 23456665 788899999999999998765
Q ss_pred ---eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 541 ---~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..|+|||||+++|.+++. ..+++..++.++.||+.
T Consensus 101 ~~~~~~lv~e~~~~~l~~~~~------------------------------------------~~~~~~~~~~i~~qi~~ 138 (371)
T 2xrw_A 101 EFQDVYIVMELMDANLCQVIQ------------------------------------------MELDHERMSYLLYQMLC 138 (371)
T ss_dssp TCCEEEEEEECCSEEHHHHHH------------------------------------------SCCCHHHHHHHHHHHHH
T ss_pred cccceEEEEEcCCCCHHHHHh------------------------------------------hccCHHHHHHHHHHHHH
Confidence 799999999887665541 23567788999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+|+.......
T Consensus 139 al~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~---------------------------------- 182 (371)
T 2xrw_A 139 GIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTSFM---------------------------------- 182 (371)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCCCC-------------------------------------------
T ss_pred HHHHHHHCCeecccCCHHHEEEcCCC--CEEEEEeecccccccccc----------------------------------
Confidence 99999999999999999999997665 499999999986543211
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhc-----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDR----------------- 758 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~----------------- 758 (934)
.+..+||+.|+|||++.+..++.++|||||||++|+|++| .+||..... ... .++...
T Consensus 183 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T 2xrw_A 183 --MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG-GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259 (371)
T ss_dssp ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred --cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 0114699999999999999999999999999999999996 566654322 111 111100
Q ss_pred -----cc------------c-ccc------CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 759 -----KD------------L-FLV------EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 759 -----~~------------~-~~~------~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.. . .+. ..++++++||.+||+.||++|||++|+|+||||..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 00 0 000 01357899999999999999999999999999954
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=372.82 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=194.0
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCChhHHHHHHHHHHHhC-CCCceeEEEEEEec--CCeEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASD-QHPNIVRWYGVESD--QDFVYLSL 546 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~--~~~~yLVm 546 (934)
..+.|.+.+.||+|+||+||++. ..+++.||||++.....+...+|+. +++.+ .||||+++++++.+ ....++||
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK-ILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHH-HHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHH-HHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 45779999999999999999985 4678999999998776677778887 45555 59999999999998 67899999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|.+ ++|.+++. .+++.+++.++.||+.||+|||++|
T Consensus 113 e~~~~----------~~l~~~~~--------------------------------~~~~~~~~~~~~qi~~~l~~lH~~~ 150 (330)
T 3nsz_A 113 EHVNN----------TDFKQLYQ--------------------------------TLTDYDIRFYMYEILKALDYCHSMG 150 (330)
T ss_dssp ECCCC----------CCHHHHGG--------------------------------GCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccCc----------hhHHHHHH--------------------------------hCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97653 34433321 2467788999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++. .+||+|||+|+........ ....||
T Consensus 151 ivH~Dikp~Nil~~~~~~-~~kl~Dfg~a~~~~~~~~~------------------------------------~~~~~~ 193 (330)
T 3nsz_A 151 IMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEY------------------------------------NVRVAS 193 (330)
T ss_dssp EECCCCSGGGEEEETTTT-EEEECCCTTCEECCTTCCC------------------------------------CSCCSC
T ss_pred eeeCCCCHHHEEEcCCCC-EEEEEeCCCceEcCCCCcc------------------------------------cccccc
Confidence 999999999999986653 5999999999876543221 114689
Q ss_pred Cccccchhccc-CCCcccccccchhhhhHHhhcCCCCCC-CCchh--HHHHHHh------------hcc-----------
Q 002343 707 SGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPY-GESFE--RDANIVK------------DRK----------- 759 (934)
Q Consensus 707 ~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf-~~~~~--~~~~i~~------------~~~----------- 759 (934)
+.|+|||++.+ ..++.++|||||||++|+|++| .+|| ..... ....+.. ...
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR-KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 272 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHT-CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhC-CCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence 99999999987 6689999999999999999997 5555 32211 1111100 000
Q ss_pred -------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 760 -------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 760 -------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.......++++.+||.+||+.||++|||++|+|+||||++..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 0001125789999999999999999999999999999976543
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=396.83 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=201.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
....+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++||||+++++++.+.+.
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~ 90 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ-NLKLFRHPHIIKLYQVISTPSD 90 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCE
Confidence 34446788999999999999999855 479999999996542 124456665 7788999999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++ .. ...+++.+++.++.||+.||+
T Consensus 91 ~~lv~E~~~gg~L~~~l-----------~~-----------------------------~~~l~~~~~~~i~~qi~~aL~ 130 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYI-----------CK-----------------------------NGRLDEKESRRLFQQILSGVD 130 (476)
T ss_dssp EEEEEECCSSEEHHHHT-----------TS-----------------------------SSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 9999997753 444443 21 234688899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++. +||+|||+|+........
T Consensus 131 ~LH~~givHrDLkp~NIll~~~~~--vkL~DFG~a~~~~~~~~~------------------------------------ 172 (476)
T 2y94_A 131 YCHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGEFL------------------------------------ 172 (476)
T ss_dssp HHHTTTEECSCCSGGGEEECTTCC--EEECCCSSCEECCTTCCB------------------------------------
T ss_pred HHHHCCCCcccccHHHEEEecCCC--eEEEeccchhhccccccc------------------------------------
Confidence 999999999999999999976654 999999999876543211
Q ss_pred ecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...+||+.|+|||++.+..+ +.++|||||||++|+|++| .+||.... ......+.......+...++++.+||.+||
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L 251 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG-TLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHML 251 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS-SCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHHT
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhC-CCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHHc
Confidence 12579999999999998776 7899999999999999996 66775543 333333333333344556789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~ 800 (934)
+.||++|||+.++++||||...
T Consensus 252 ~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 252 QVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp CSSTTTSCCHHHHHTCHHHHTT
T ss_pred CCCchhCcCHHHHHhCHHhhhc
Confidence 9999999999999999999754
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=369.67 Aligned_cols=252 Identities=24% Similarity=0.401 Sum_probs=190.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|+||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR-MLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHH-HHHhCCCCCccchhheeecCCeEEEEE
Confidence 4688999999999999999865 4589999999865443 22345555 788899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||++++. .+++. ...++++..++.++.||+.||+|||++|
T Consensus 82 e~~~~~~l----------~~~~~-----------------------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~ 122 (311)
T 4agu_A 82 EYCDHTVL----------HELDR-----------------------------YQRGVPEHLVKSITWQTLQAVNFCHKHN 122 (311)
T ss_dssp ECCSEEHH----------HHHHH-----------------------------TSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCCchH----------HHHHh-----------------------------hhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 98876422 22111 1345788899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+|+......... ...+||
T Consensus 123 ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~~ 165 (311)
T 4agu_A 123 CIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYY-----------------------------------DDEVAT 165 (311)
T ss_dssp EECCCCSGGGEEECTTS--CEEECCCTTCEECC-----------------------------------------------
T ss_pred CcCCCCChhhEEEcCCC--CEEEeeCCCchhccCccccc-----------------------------------CCCcCC
Confidence 99999999999997665 49999999998765322111 114689
Q ss_pred Cccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhh-ccc-----------------------
Q 002343 707 SGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-RKD----------------------- 760 (934)
Q Consensus 707 ~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~-~~~----------------------- 760 (934)
+.|+|||++.+ ..++.++|||||||++|+|++| .+||...... ....+.. ...
T Consensus 166 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T 4agu_A 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244 (311)
T ss_dssp GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCC
T ss_pred ccccChHHHhcCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCc
Confidence 99999999976 5679999999999999999996 6777554322 1111110 000
Q ss_pred -------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 761 -------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 761 -------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
......++++.+||.+||+.||++|||++|+++||||.+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp SSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred cccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 001245678999999999999999999999999999976544
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=380.06 Aligned_cols=254 Identities=23% Similarity=0.366 Sum_probs=196.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~----- 539 (934)
.++.+|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. ++..++||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK-ILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHH-HHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHH-HHHhcCCCCCccceeEEecCCcccc
Confidence 4567899999999999999999854 5688999999975432 23456665 77889999999999998765
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
...|+|||+|+++|.+++. ...+++.+++.++.||+.||
T Consensus 103 ~~~~iv~e~~~~~L~~~l~-----------------------------------------~~~~~~~~~~~i~~qi~~aL 141 (364)
T 3qyz_A 103 KDVYIVQDLMETDLYKLLK-----------------------------------------TQHLSNDHICYFLYQILRGL 141 (364)
T ss_dssp CCEEEEEECCSEEHHHHHH-----------------------------------------HCCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccCcCHHHHHH-----------------------------------------hCCCCHHHHHHHHHHHHHHH
Confidence 4799999998877666541 23467888999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++. +||+|||+|+...........
T Consensus 142 ~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~~~~~-------------------------------- 187 (364)
T 3qyz_A 142 KYIHSANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGF-------------------------------- 187 (364)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCGGGCBCCT--------------------------------
T ss_pred HHHHHCCeecCCCChHhEEECCCCC--EEEEeCcceEecCCCCCcccc--------------------------------
Confidence 9999999999999999999976654 999999999876543221110
Q ss_pred eecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcc-----------------
Q 002343 700 FTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRK----------------- 759 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~----------------- 759 (934)
.+..+||+.|+|||++.+. .++.++|||||||++|+|++| .+||.... .... .+.....
T Consensus 188 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 266 (364)
T 3qyz_A 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266 (364)
T ss_dssp TCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHS-SCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred ccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHH
Confidence 1125799999999987654 589999999999999999996 67775432 2111 1111000
Q ss_pred -------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 -------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 -------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.......++++.+||.+||+.||++|||+.|+|+||||...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence 00113456899999999999999999999999999999654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=379.30 Aligned_cols=268 Identities=26% Similarity=0.384 Sum_probs=198.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--------------hHHHHHHHHHHHhCCCCceeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--------------DVALKEIQNLIASDQHPNIVRWYG 534 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--------------~~~~~Ei~~ll~~l~HpNIV~l~g 534 (934)
..+.+.|.+.+.||+|+||+||++...+|+.||||++..... +...+|+. +++.++||||+++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR-LLNHFHHPNILGLRD 96 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHH-HHHHCCCTTBCCCSE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHH-HHHhCCCcCccceee
Confidence 455678999999999999999999777899999999854321 34556665 778899999999999
Q ss_pred EEec-----CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHH
Q 002343 535 VESD-----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (934)
Q Consensus 535 ~~~~-----~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 609 (934)
++.. ....|+|||+|.++|.+++.. ....+++.+++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---------------------------------------~~~~~~~~~~~ 137 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMRTDLAQVIHD---------------------------------------QRIVISPQHIQ 137 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCSEEHHHHHHC---------------------------------------TTSCCCHHHHH
T ss_pred eEEeccCCCcceEEEEEccCCCCHHHHHHh---------------------------------------cccCCCHHHHH
Confidence 9843 447999999998877766521 12346788999
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhh
Q 002343 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689 (934)
Q Consensus 610 ~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (934)
.++.||+.||+|||++||+||||||+|||++.++. +||+|||+|+........
T Consensus 138 ~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~------------------------- 190 (362)
T 3pg1_A 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND--ITICDFNLAREDTADANK------------------------- 190 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCTTC-----------------------------------
T ss_pred HHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC--EEEEecCccccccccccc-------------------------
Confidence 99999999999999999999999999999976654 999999999754332111
Q ss_pred ccccccccceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcc-------
Q 002343 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRK------- 759 (934)
Q Consensus 690 ~~~~~~g~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~------- 759 (934)
+...||+.|+|||++.+ ..++.++|||||||++|+|++| .+||.... .... .+.....
T Consensus 191 -----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 258 (362)
T 3pg1_A 191 -----------THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDV 258 (362)
T ss_dssp ----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred -----------ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHcCCCChHHh
Confidence 11468999999999987 6789999999999999999996 66665432 2211 1111000
Q ss_pred ------------------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhhhhhcccch
Q 002343 760 ------------------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVE 815 (934)
Q Consensus 760 ------------------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl~~~sd~~e 815 (934)
.......++++.+||.+||+.||++|||+.|+++||||............+.++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~~~~~~ 338 (362)
T 3pg1_A 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFH 338 (362)
T ss_dssp HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGTTTCCCCCC
T ss_pred hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccccccccccccC
Confidence 00112346789999999999999999999999999999876555554444444443
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=395.85 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=198.0
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecC-----ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~-----~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.++|.+.+.||+|+||+||++.. .+++.||||++.+. ......+|+. +++.++|||||++++++.+.+..|
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHH-HHHhCCCCCcCeEEEEEEcCCEEE
Confidence 3567899999999999999999855 47899999998642 2244566776 788899999999999999999999
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||.+ +|.+.+ .. ...+++.+++.++.||+.||+||
T Consensus 98 lv~e~~~~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~i~~qi~~al~~l 137 (486)
T 3mwu_A 98 IVGELYTGGELFDEI-----------IK-----------------------------RKRFSEHDAARIIKQVFSGITYM 137 (486)
T ss_dssp EEECCCCSCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997764 444433 21 34578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 623 HEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|++|||||||||+|||++.. ....+||+|||+|+.+...... .
T Consensus 138 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------~ 181 (486)
T 3mwu_A 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------------------------------------K 181 (486)
T ss_dssp HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----------------------------------------
T ss_pred HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc------------------------------------C
Confidence 99999999999999999643 2346999999999876443211 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcc-c---ccccCCCHHHHHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRK-D---LFLVEHIPEAVDLFTR 776 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~-~---~~~~~~~~e~~dLI~~ 776 (934)
..+||+.|+|||++.+ .++.++|||||||++|+|++| .+||.. ........+.... . ......++++++||.+
T Consensus 182 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 259 (486)
T 3mwu_A 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG-TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259 (486)
T ss_dssp CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHH
T ss_pred CCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHH
Confidence 1469999999999876 599999999999999999997 566644 3333333332221 1 1223467899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
||+.||++|||+.++|+||||...
T Consensus 260 ~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 260 MLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp HTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred HcCCChhhCcCHHHHhcCHhhccC
Confidence 999999999999999999999643
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=400.92 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=206.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
...+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++|||||++++++.+.+.+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~-iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ-ILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHH-HHHHcCCCCEeeEEEEEeeCCEE
Confidence 4456799999999999999999865 479999999996532 223455665 78889999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||||. +|+|.+++... ...++++..++.++.||+.||+||
T Consensus 260 ~lVmEy~~----------gg~L~~~l~~~---------------------------~~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 260 CLVLTLMN----------GGDLKFHIYHM---------------------------GQAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp EEEECCCC----------SCBHHHHHHSS---------------------------SSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC----------CCcHHHHHHhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999664 34444443211 123478899999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++|||||||||+|||++.++ .+||+|||+|+.+..... .+.
T Consensus 303 H~~gIvHrDLKPeNILld~~g--~vKL~DFGla~~~~~~~~------------------------------------~~~ 344 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQT------------------------------------IKG 344 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTS--CEEECCCTTCEECCTTCC------------------------------------EEC
T ss_pred HHCCEeccCCchheEEEeCCC--CeEEEecccceecccCcc------------------------------------ccc
Confidence 999999999999999997665 499999999987654321 112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccccccCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
.+||+.|+|||++.+..++.++|||||||++|||++| .+||.... ......+......++...++++++||.+|
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG-~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~l 423 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG-QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQL 423 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHS-SCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhC-CCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHh
Confidence 5799999999999999999999999999999999996 67775432 22333344444445566789999999999
Q ss_pred ccCCCCCCc-----CHHHHHcCCCCCCccch
Q 002343 778 LDPNPDLRP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 778 L~~DP~~RP-----Ta~evL~HPff~~~~~~ 803 (934)
|+.||.+|| +++|+++||||.+.++.
T Consensus 424 L~~dP~~R~g~~~~sa~eil~HpfF~~i~w~ 454 (576)
T 2acx_A 424 LCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454 (576)
T ss_dssp TCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred ccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence 999999999 79999999999887654
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=373.35 Aligned_cols=256 Identities=23% Similarity=0.270 Sum_probs=195.9
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE--ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCC------CCceeEEEEEEe
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQ------HPNIVRWYGVES 537 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~--~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~------HpNIV~l~g~~~ 537 (934)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++ |++|+++++++.
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQ-VLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHH-HHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHH-HHHHhhhcCCCCceeeEeeecccc
Confidence 466788999999999999999999854 4689999999965432 33455554 444444 456999999999
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+.+..|+|||+|+++|.+++... ....+++.+++.++.||+.
T Consensus 88 ~~~~~~lv~e~~~~~l~~~l~~~--------------------------------------~~~~~~~~~~~~~~~qi~~ 129 (339)
T 1z57_A 88 HHGHICIVFELLGLSTYDFIKEN--------------------------------------GFLPFRLDHIRKMAYQICK 129 (339)
T ss_dssp ETTEEEEEEECCCCBHHHHHHHT--------------------------------------TTCCCCHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCCCCCHHHHHHhc--------------------------------------CCCCCcHHHHHHHHHHHHH
Confidence 99999999998877777665311 0234678889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCC-----------------CceEEEeeccccccccCCCcccccCCCCcchhhHHHH
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDK-----------------SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~-----------------~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~ 680 (934)
||+|||++||+||||||+|||++.++ ...+||+|||+++.......
T Consensus 130 ~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----------------- 192 (339)
T 1z57_A 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS----------------- 192 (339)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCC-----------------
T ss_pred HHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccc-----------------
Confidence 99999999999999999999997632 34599999999986433211
Q ss_pred HHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-
Q 002343 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR- 758 (934)
Q Consensus 681 ~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~- 758 (934)
..+||+.|+|||++.+..++.++|||||||++|||++| .+||...... ....+...
T Consensus 193 ---------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 193 ---------------------TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG-FTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ---------------------SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHS-SCSCCCSCHHHHHHHHHHHH
T ss_pred ---------------------cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHh
Confidence 14689999999999999999999999999999999996 6666543222 11111100
Q ss_pred cc-------------------------------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 759 KD-------------------------------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 759 ~~-------------------------------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
.. ......++++.+||.+||+.||++|||+.|+++||
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 330 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHP 330 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCH
Confidence 00 00011135788999999999999999999999999
Q ss_pred CCCCcc
Q 002343 796 FFWTAD 801 (934)
Q Consensus 796 ff~~~~ 801 (934)
||....
T Consensus 331 ~f~~~~ 336 (339)
T 1z57_A 331 FFDLLK 336 (339)
T ss_dssp GGGGGG
T ss_pred HHHHHh
Confidence 997544
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=382.80 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=194.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEe------------
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVES------------ 537 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~------------ 537 (934)
..++|.+.+.||+|+||+||++.. .+|+.||||++..... ...+|+. +++.++|||||++++++.
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-YKNRELD-IMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-SCCHHHH-HHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHH-HHHHcCCCCccchhheeeecCccccccccc
Confidence 456799999999999999999854 6799999999865432 2335665 788999999999999984
Q ss_pred --------------------------cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccc
Q 002343 538 --------------------------DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591 (934)
Q Consensus 538 --------------------------~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~ 591 (934)
+..++|+|||||+++|.+.+.. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-------~~----------------------- 132 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKS-------FI----------------------- 132 (383)
T ss_dssp ---------------------------CCEEEEEECCCSEEHHHHHHH-------HH-----------------------
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHH-------HH-----------------------
Confidence 3445999999998877766531 11
Q ss_pred hhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCC
Q 002343 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671 (934)
Q Consensus 592 ~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~ 671 (934)
.....+++..++.++.||+.||+|||++||+||||||+|||++.+. ..+||+|||+|+.+.......
T Consensus 133 ------~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~~~~------ 199 (383)
T 3eb0_A 133 ------RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD-NTLKLCDFGSAKKLIPSEPSV------ 199 (383)
T ss_dssp ------HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTT-TEEEECCCTTCEECCTTSCCC------
T ss_pred ------hcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCC-CcEEEEECCCCcccCCCCCCc------
Confidence 0135678899999999999999999999999999999999997332 369999999998765432211
Q ss_pred cchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-
Q 002343 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE- 749 (934)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~- 749 (934)
...||+.|+|||++.+.. ++.++|||||||++|||++| .+||.....
T Consensus 200 ------------------------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~ 248 (383)
T 3eb0_A 200 ------------------------------AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG-KPLFSGETSI 248 (383)
T ss_dssp ------------------------------CCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHH
T ss_pred ------------------------------CcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC-CCCCCCCChH
Confidence 146899999999998754 89999999999999999996 677754322
Q ss_pred H-HHHHHhhcc----------------------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 750 R-DANIVKDRK----------------------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 750 ~-~~~i~~~~~----------------------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
. ...++.... ...+...++++.+||.+||+.||++|||+.|+|+||||..
T Consensus 249 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 2 122221100 0012335678999999999999999999999999999953
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=410.02 Aligned_cols=255 Identities=22% Similarity=0.303 Sum_probs=204.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.+.. .+....|...+....+||||+++++++.+.+.+|||
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 5688999999999999999854 468899999997532 234455655333344899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|..++.. ...+++.+++.++.||+.||+|||++
T Consensus 421 ~E~~~----------gg~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~~LH~~ 461 (674)
T 3pfq_A 421 MEYVN----------GGDLMYHIQQ-----------------------------VGRFKEPHAVFYAAEIAIGLFFLQSK 461 (674)
T ss_dssp EECCC----------SCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCcC----------CCcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99554 4555555432 24578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+||||+.++. +||+|||+|+........ ....+|
T Consensus 462 gIiHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~~~~-----------------------------------~~~~~G 504 (674)
T 3pfq_A 462 GIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVT-----------------------------------TKTFCG 504 (674)
T ss_dssp SEECCCCCSTTEEECSSSC--EEECCCTTCEECCCTTCC-----------------------------------BCCCCS
T ss_pred CeEeccCChhhEEEcCCCc--EEEeecceeeccccCCcc-----------------------------------cccccC
Confidence 9999999999999977664 999999999864332211 112579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|+|||++.+..|+.++|||||||+||||++| .+||.. ........+......++...++++++||.+||+.||++
T Consensus 505 T~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~ 583 (674)
T 3pfq_A 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK 583 (674)
T ss_dssp CSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTT
T ss_pred CCcccCHhhhcCCCCCccceEechHHHHHHHHcC-CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHH
Confidence 9999999999999999999999999999999996 666654 33444444444445556677899999999999999999
Q ss_pred CcCH-----HHHHcCCCCCCccchh
Q 002343 785 RPKA-----QNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RPTa-----~evL~HPff~~~~~~~ 804 (934)
||++ +||++||||...++..
T Consensus 584 R~~~~~~~~~ei~~h~ff~~i~w~~ 608 (674)
T 3pfq_A 584 RLGCGPEGERDIKEHAFFRYIDWEK 608 (674)
T ss_dssp CTTCSTTHHHHHHSSGGGSSCCHHH
T ss_pred CCCCCCCcHHHHhcCccccCCCHHH
Confidence 9997 9999999999877653
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=364.71 Aligned_cols=248 Identities=27% Similarity=0.392 Sum_probs=195.9
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
-+.|.+.+.||+|+||+||++.. .+++.||||++.+... ....+|+ .+++.++||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV-EIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHH-HHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHH-HHHHcCCCCCCcchhheEecCCEEEE
Confidence 35688999999999999999854 4578999999865321 2334455 47888999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ |+|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 87 v~e~~~~----------~~l~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~LH~ 127 (279)
T 3fdn_A 87 ILEYAPL----------GTVYRELQK-----------------------------LSKFDEQRTATYITELANALSYCHS 127 (279)
T ss_dssp EECCCTT----------EEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9997653 333333321 2456788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++. +||+|||++........ ....
T Consensus 128 ~~i~H~dlkp~Nili~~~~~--~~l~Dfg~~~~~~~~~~-------------------------------------~~~~ 168 (279)
T 3fdn_A 128 KRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSSRR-------------------------------------TDLC 168 (279)
T ss_dssp TTCEECCCCGGGEEECTTSC--EEECSCCEESCC---------------------------------------------C
T ss_pred CCEecccCChHhEEEcCCCC--EEEEeccccccCCcccc-------------------------------------cccC
Confidence 99999999999999976664 99999999865433211 1146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+.......+...++++.+||.+||+.||+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 247 (279)
T 3fdn_A 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 247 (279)
T ss_dssp CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGG
T ss_pred CCCCccCHhHhccCCCCccchhHhHHHHHHHHHHC-CCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChh
Confidence 89999999999999999999999999999999996 66776543 33333344444444555678999999999999999
Q ss_pred CCcCHHHHHcCCCCCC
Q 002343 784 LRPKAQNVLNHPFFWT 799 (934)
Q Consensus 784 ~RPTa~evL~HPff~~ 799 (934)
+|||+.|+++||||..
T Consensus 248 ~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 248 QRPMLREVLEHPWITA 263 (279)
T ss_dssp GSCCHHHHHHCHHHHH
T ss_pred hCCCHHHHhhCccccC
Confidence 9999999999999954
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=378.85 Aligned_cols=249 Identities=21% Similarity=0.271 Sum_probs=198.6
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
+.++|.+.+.||+|+||+||++. ..+++.||||++..... ....+|+. +++.++||||+++++++.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIA-ILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHH-HHTTCCCTTBCCEEEEEEC
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHH-HHHhCCCCCEeeEEEEEee
Confidence 45789999999999999999985 46789999999975431 12345665 7788899999999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+..|+|||+|..+ ++|.+++.. ...+++..++.++.||+.|
T Consensus 101 ~~~~~lv~e~~~~g---------~~l~~~~~~-----------------------------~~~l~~~~~~~i~~qi~~~ 142 (335)
T 3dls_A 101 QGFFQLVMEKHGSG---------LDLFAFIDR-----------------------------HPRLDEPLASYIFRQLVSA 142 (335)
T ss_dssp SSEEEEEEECCTTS---------CBHHHHHHT-----------------------------CCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCC---------ccHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHH
Confidence 99999999977532 133333221 2357888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++.+......
T Consensus 143 L~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~---------------------------------- 186 (335)
T 3dls_A 143 VGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLF---------------------------------- 186 (335)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCEECCTTCCB----------------------------------
T ss_pred HHHHHhCCeEEeccCHHHEEEcCCC--cEEEeecccceECCCCCce----------------------------------
Confidence 9999999999999999999997665 4999999999876543211
Q ss_pred eeecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHc
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
...+||+.|+|||++.+..+ +.++|||||||++|+|++| .+||....... ......+...++++.+||.+|
T Consensus 187 --~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~-----~~~~~~~~~~~~~l~~li~~~ 258 (335)
T 3dls_A 187 --YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE-ENPFCELEETV-----EAAIHPPYLVSKELMSLVSGL 258 (335)
T ss_dssp --CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS-SCSCSSGGGGT-----TTCCCCSSCCCHHHHHHHHHH
T ss_pred --eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhC-CCchhhHHHHH-----hhccCCCcccCHHHHHHHHHH
Confidence 11469999999999998887 8899999999999999996 67776532211 111222334678999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
|+.||++|||+.++++||||+....
T Consensus 259 L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 259 LQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp TCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred ccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999999999999999987543
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=368.11 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=192.1
Q ss_pred CceeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEe-----
Q 002343 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVES----- 537 (934)
Q Consensus 467 ~~~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~----- 537 (934)
.+..++++|.+.+.||+|+||+||++... +|+.||||++..... +...+|+. +++.++||||+++++++.
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK-IIRRLDHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECTTSCB
T ss_pred ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHH-HHHhcCCCCeeEEEEeccccccc
Confidence 35678899999999999999999998654 589999999875543 23456665 788999999999999874
Q ss_pred ---------cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHH
Q 002343 538 ---------DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (934)
Q Consensus 538 ---------~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 608 (934)
+.+..|+|||+|+++|.+++. ...+++.++
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~~~~~~~ 122 (320)
T 2i6l_A 84 LTDDVGSLTELNSVYIVQEYMETDLANVLE-----------------------------------------QGPLLEEHA 122 (320)
T ss_dssp CCC----CCSCSEEEEEEECCSEEHHHHHT-----------------------------------------TCCCCHHHH
T ss_pred cccccccccccCceeEEeeccCCCHHHHhh-----------------------------------------cCCccHHHH
Confidence 457899999988877666541 234677889
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhh
Q 002343 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688 (934)
Q Consensus 609 ~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (934)
+.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||+++...........
T Consensus 123 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~kl~Dfg~~~~~~~~~~~~~~--------------------- 180 (320)
T 2i6l_A 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED-LVLKIGDFGLARIMDPHYSHKGH--------------------- 180 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-TEEEECCCTTCBCC--------C---------------------
T ss_pred HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CeEEEccCccccccCCCcccccc---------------------
Confidence 99999999999999999999999999999997443 36999999999876543211110
Q ss_pred hccccccccceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhccc-----
Q 002343 689 CECVFQFGVLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKD----- 760 (934)
Q Consensus 689 ~~~~~~~g~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~----- 760 (934)
.....||+.|+|||++.+ ..++.++|||||||++|||++| .+||..... ... .+......
T Consensus 181 -----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
T 2i6l_A 181 -----------LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG-KTLFAGAHELEQMQLILESIPVVHEED 248 (320)
T ss_dssp -----------CCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHSCCCCHHH
T ss_pred -----------cccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCchhh
Confidence 011458999999999876 6789999999999999999996 666654322 111 11111000
Q ss_pred ------------------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 761 ------------------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 761 ------------------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
......++++.+||.+||+.||++|||++|+++||||....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp HHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred hhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 01134578999999999999999999999999999996543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=387.88 Aligned_cols=254 Identities=26% Similarity=0.332 Sum_probs=195.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec------CCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD------QDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------~~~~y 543 (934)
....|.+.+.||+|+||+||++.. .+|+.||||++.... ....+|++ +++.++|||||++++++.. ..+++
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~-il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQ-IMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHH-HHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHH-HHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 445799999999999999999865 468999999986543 22345665 7889999999999998853 23478
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.++|.+++.. +. .....+++..++.++.||+.||+|||
T Consensus 130 lv~e~~~~~l~~~~~~-------~~-----------------------------~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 130 LVLDYVPETVYRVARH-------YS-----------------------------RAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp EEEECCCEEHHHHHHH-------HH-----------------------------HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eehhcccccHHHHHHH-------Hh-----------------------------hccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998876655421 00 01356788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++. .+||+|||+|+.+...... ...
T Consensus 174 ~~~ivHrDlkp~NILl~~~~~-~~kl~DFG~a~~~~~~~~~------------------------------------~~~ 216 (420)
T 1j1b_A 174 SFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPN------------------------------------VSY 216 (420)
T ss_dssp TTTEECSCCSGGGEEEETTTT-EEEECCCTTCEECCTTCCC------------------------------------CSC
T ss_pred HCCccccCCChhhEEEeCCCC-eEEeccchhhhhcccCCCc------------------------------------eee
Confidence 999999999999999986543 5899999999876543211 114
Q ss_pred CCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc------------c---c-----
Q 002343 704 YGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR------------K---D----- 760 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~------------~---~----- 760 (934)
+||+.|+|||++.+. .++.++|||||||++|||++| .+||..... ....+++.. . .
T Consensus 217 ~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G-~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~ 295 (420)
T 1j1b_A 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQ 295 (420)
T ss_dssp CSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCC
T ss_pred eeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCc
Confidence 689999999999765 789999999999999999996 667754322 122222210 0 0
Q ss_pred --------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 761 --------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 761 --------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.+....++++++||.+||+.||++|||+.|+++||||...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 296 IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 0122346899999999999999999999999999999543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=360.23 Aligned_cols=250 Identities=25% Similarity=0.390 Sum_probs=195.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.+.++|.+.+.||+|+||+||++.. .++..||+|++.+.. .+...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE-IMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567899999999999999999854 457899999987532 234555665 78889999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||.+ +|.+++ .. ...+++.+++.++.||+.||+|||+
T Consensus 85 ~e~~~~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (277)
T 3f3z_A 85 MELCTGGELFERV-----------VH-----------------------------KRVFRESDAARIMKDVLSAVAYCHK 124 (277)
T ss_dssp EECCCSCBHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCcHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997754 444433 21 2446788999999999999999999
Q ss_pred CCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 625 IGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+||+||||||+|||+..+ ....+||+|||+++.+...... ...
T Consensus 125 ~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------~~~ 168 (277)
T 3f3z_A 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM------------------------------------RTK 168 (277)
T ss_dssp TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB------------------------------------CCC
T ss_pred CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch------------------------------------hcc
Confidence 999999999999999321 2235999999999876543211 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcccccc----cCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRKDLFL----VEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~~~~~----~~~~~e~~dLI~~~L 778 (934)
.||+.|+|||++.+ .++.++|||||||++|+|++| .+||...... ....+.......+ ...++++.+||.+||
T Consensus 169 ~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 246 (277)
T 3f3z_A 169 VGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCG-YPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 246 (277)
T ss_dssp CSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHT
T ss_pred CCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHc
Confidence 69999999999865 489999999999999999996 6777654332 2222222222221 246789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~ 798 (934)
+.||++|||+.++|+||||.
T Consensus 247 ~~dp~~R~s~~~~l~h~~~~ 266 (277)
T 3f3z_A 247 TKSPKQRITSLQALEHEWFE 266 (277)
T ss_dssp CSSTTTSCCHHHHTTSHHHH
T ss_pred cCChhhCcCHHHHhcCHHHh
Confidence 99999999999999999994
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=364.18 Aligned_cols=250 Identities=25% Similarity=0.400 Sum_probs=174.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. ++..++||||+++++++.+.+..|+|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK-IHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHH-HHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 4588899999999999999865 5799999999964321 23445554 77888999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|.+ +|.+++ ... ...+++.+++.++.||+.||+|||+
T Consensus 90 ~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~ 130 (278)
T 3cok_A 90 LEMCHNGEMNRYL-----------KNR----------------------------VKPFSENEARHFMHQIITGMLYLHS 130 (278)
T ss_dssp EECCTTEEHHHHH-----------HTC----------------------------SSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCcHHHHH-----------hhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997754 444443 210 2356788999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++......... ....
T Consensus 131 ~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~ 173 (278)
T 3cok_A 131 HGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKH-----------------------------------YTLC 173 (278)
T ss_dssp TTEECSSCCGGGEEECTTC--CEEECCCTTCEECC---------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCC--CEEEEeecceeeccCCCCcc-----------------------------------eecc
Confidence 9999999999999997665 49999999998764321110 0145
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|+|||++.+..++.++|||||||++|+|++| .+||..... .............+...++++.+||.+||+.||+
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 252 (278)
T 3cok_A 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG-RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPA 252 (278)
T ss_dssp ------------------CTHHHHHHHHHHHHHHS-SCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHHcccCHh
Confidence 89999999999998899999999999999999996 667754322 2111111112222344578999999999999999
Q ss_pred CCcCHHHHHcCCCCCCc
Q 002343 784 LRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~ 800 (934)
+|||++++++||||...
T Consensus 253 ~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 253 DRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp GSCCHHHHTTSTTTC--
T ss_pred hCCCHHHHhcCccccCC
Confidence 99999999999999653
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=376.42 Aligned_cols=253 Identities=23% Similarity=0.278 Sum_probs=192.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--------DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
..++|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+.+.
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK-LLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHH-HHHHCCCTTBCCEEEEECCTTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHH-HHhhCCCCCCCeEEEEEeeCCc
Confidence 446788999999999999999855 4689999999864321 24556765 7788999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||+|+++|.+++... ...+++.+++.++.||+.||+|
T Consensus 87 ~~lv~e~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~qi~~~l~~ 127 (346)
T 1ua2_A 87 ISLVFDFMETDLEVIIKDN---------------------------------------SLVLTPSHIKAYMLMTLQGLEY 127 (346)
T ss_dssp CEEEEECCSEEHHHHHTTC---------------------------------------CSSCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCHHHHHHhc---------------------------------------CcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999988766655211 1235677889999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++ .+||+|||+|+.+....... +
T Consensus 128 lH~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~-----------------------------------~ 170 (346)
T 1ua2_A 128 LHQHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAY-----------------------------------T 170 (346)
T ss_dssp HHHTTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSCCCCC-----------------------------------C
T ss_pred HHHCCEECCCCCHHHEEEcCCC--CEEEEecccceeccCCcccC-----------------------------------C
Confidence 9999999999999999997665 49999999998764332111 1
Q ss_pred cCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcccc-----------------
Q 002343 702 VGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKDL----------------- 761 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~~----------------- 761 (934)
..+||+.|+|||++.+. .++.++|||||||++|+|++| .+||...... . ..+.......
T Consensus 171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 249 (346)
T 1ua2_A 171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 249 (346)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccc
Confidence 24689999999999764 479999999999999999996 6777554322 1 2222210000
Q ss_pred ----------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 762 ----------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 762 ----------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.....++++++||.+||+.||++|||+.|+|+||||.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred cccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 0123457899999999999999999999999999997643
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=383.73 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=194.0
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCC--------CCceeEEEEEE
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQ--------HPNIVRWYGVE 536 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~--------HpNIV~l~g~~ 536 (934)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++ ||||+++++++
T Consensus 32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIR-LLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHH-HHHHHhhcCCCCCCcceeeeeecce
Confidence 355678899999999999999999854 5689999999975432 34556665 444443 88999999998
Q ss_pred e----cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHH
Q 002343 537 S----DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (934)
Q Consensus 537 ~----~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 612 (934)
. +....|||||+|.++|.+.+... ...++++.+++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------------------------------------~~~~~~~~~~~~i~ 152 (397)
T 1wak_A 111 KISGVNGTHICMVFEVLGHHLLKWIIKS--------------------------------------NYQGLPLPCVKKII 152 (397)
T ss_dssp EEEETTEEEEEEEECCCCCBHHHHHHHT--------------------------------------TTSCCCHHHHHHHH
T ss_pred eecCCCCceEEEEEeccCccHHHHHHhc--------------------------------------ccCCCCHHHHHHHH
Confidence 8 56789999999988776665211 12457888999999
Q ss_pred HHHHHHHHHHHHC-CCcccCCCCCeEEEecCC-----------------------------------------------C
Q 002343 613 RDIVSGLSHLHEI-GLIHRDLKPQNVLISKDK-----------------------------------------------S 644 (934)
Q Consensus 613 ~qIa~gL~yLHs~-gIVHRDLKP~NILl~~d~-----------------------------------------------~ 644 (934)
.||+.||+|||++ |||||||||+|||++.++ .
T Consensus 153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
T 1wak_A 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEK 232 (397)
T ss_dssp HHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGG
T ss_pred HHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccc
Confidence 9999999999998 999999999999997553 1
Q ss_pred ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccc
Q 002343 645 FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAI 724 (934)
Q Consensus 645 ~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ks 724 (934)
..+||+|||+|+...... +..+||+.|+|||++.+..++.++
T Consensus 233 ~~~kl~DfG~a~~~~~~~--------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 233 LKVKIADLGNACWVHKHF--------------------------------------TEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp CCEEECCGGGCEETTBCS--------------------------------------CSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred cceEeccccccccccccC--------------------------------------ccCCCCCcccCChhhcCCCCCcHH
Confidence 369999999998764321 114689999999999999999999
Q ss_pred cccchhhhhHHhhcCCCCCCCCch--------hHHHHHHhhccc------------------------------------
Q 002343 725 DLFSLGCILFFCITGGKHPYGESF--------ERDANIVKDRKD------------------------------------ 760 (934)
Q Consensus 725 DIWSLGvILyeLltGg~~Pf~~~~--------~~~~~i~~~~~~------------------------------------ 760 (934)
|||||||++|||++| .+||.... .....+......
T Consensus 275 DiwslG~il~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 275 DIWSTACMAFELATG-DYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHS-SCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHhhC-CCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 999999999999996 66774321 111111110000
Q ss_pred -----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 761 -----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 761 -----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
......++++.+||.+||+.||++|||+.|+|+||||.
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 00111235788999999999999999999999999995
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=375.59 Aligned_cols=295 Identities=26% Similarity=0.324 Sum_probs=199.1
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC--------hhHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~--------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
..+.++|.+.+.||+|+||+||++.. .+++.||||++.+.. .+...+|+. +++.++|||||++++++.+.
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR-LMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHH-HHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHH-HHHhCCCCCcceeehhhccC
Confidence 34668899999999999999999854 568899999986432 133455665 78889999999999999999
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHH-----HHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEE-----QLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~-----~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
+..|+|||||.+ +|.+++......-.. .+................. .. ..........+++..++.++.
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING-SI----HGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHS-CC------CEEECCHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccc-cc----ccccccccccccHHHHHHHHH
Confidence 999999997753 555544210000000 0000000000000000000 00 000000001134677889999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
||+.||+|||++||+||||||+|||++.++...+||+|||+|+.+..........
T Consensus 176 qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~------------------------- 230 (345)
T 3hko_A 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG------------------------- 230 (345)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------------------------
T ss_pred HHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccccc-------------------------
Confidence 9999999999999999999999999987765579999999998764422111000
Q ss_pred ccccceeecCCCCCccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhccccc---ccCC
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDLF---LVEH 766 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~~---~~~~ 766 (934)
.....||+.|+|||++.+ ..++.++|||||||++|||++| .+||..... ... .+........ ....
T Consensus 231 ------~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 231 ------MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG-AVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp ----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ------ccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 112569999999999975 6789999999999999999996 667755432 222 2222222111 2235
Q ss_pred CHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 767 ~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
++++.+||.+||+.||.+|||+.++|+||||....
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 78999999999999999999999999999996544
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=362.95 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=197.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++.... .....+|+. +++.++||||+++++++.+.+..|+|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE-IQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHH-HHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 5688899999999999999855 457899999986432 123445554 88899999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|.+ +|.+++ .. ...+++.+++.++.||+.||+|||+
T Consensus 93 ~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH~ 132 (284)
T 2vgo_A 93 LEFAPRGELYKEL-----------QK-----------------------------HGRFDEQRSATFMEELADALHYCHE 132 (284)
T ss_dssp ECCCTTEEHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997754 554444 21 2346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++. +||+|||++........ ....
T Consensus 133 ~~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~~~-------------------------------------~~~~ 173 (284)
T 2vgo_A 133 RKVIHRDIKPENLLMGYKGE--LKIADFGWSVHAPSLRR-------------------------------------RTMC 173 (284)
T ss_dssp TTEECCCCSGGGEEECTTCC--EEECCCTTCEECSSSCB-------------------------------------CCCC
T ss_pred CCceecCCCHHHEEEcCCCC--EEEecccccccCccccc-------------------------------------cccc
Confidence 99999999999999976664 99999999876543211 0146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|+|||++.+..++.++|||||||++|+|++| .+||..... .....+.......+...++++.+||.+||+.||.
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 252 (284)
T 2vgo_A 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG-MPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPP 252 (284)
T ss_dssp SCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHC-CCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHh
Confidence 89999999999999999999999999999999996 677765432 2222233333334455678999999999999999
Q ss_pred CCcCHHHHHcCCCCCCcc
Q 002343 784 LRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 784 ~RPTa~evL~HPff~~~~ 801 (934)
+|||++++++||||+...
T Consensus 253 ~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 253 QRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp GSCCHHHHHTCHHHHHHC
T ss_pred hCCCHHHHhhCHHHHhhc
Confidence 999999999999996433
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=395.15 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=204.5
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .....+|+. +++.++|||||++++++.+.+.+|
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~-iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK-ILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHH-HHHhcCCCCEeeEEEEEeeCCEEE
Confidence 346799999999999999999865 469999999996532 133455655 778899999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||. +|+|.+++..... ....+++..++.++.||+.||+|||
T Consensus 262 lVmE~~~----------gg~L~~~l~~~~~-------------------------~~~~l~e~~~~~~~~qi~~aL~~LH 306 (543)
T 3c4z_A 262 LVMTIMN----------GGDIRYHIYNVDE-------------------------DNPGFQEPRAIFYTAQIVSGLEHLH 306 (543)
T ss_dssp EEECCCT----------TCBHHHHHHTSST-------------------------TSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecc----------CCCHHHHHHHhhc-------------------------ccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999665 3444444432110 1235788999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.++. +||+|||+|+.+....... ...
T Consensus 307 ~~gIvHrDLKP~NILl~~~g~--vkL~DFGla~~~~~~~~~~-----------------------------------~~~ 349 (543)
T 3c4z_A 307 QRNIIYRDLKPENVLLDDDGN--VRISDLGLAVELKAGQTKT-----------------------------------KGY 349 (543)
T ss_dssp HTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCTTCCCB-----------------------------------CCC
T ss_pred HcCCcccCCChHHEEEeCCCC--EEEeecceeeeccCCCccc-----------------------------------ccc
Confidence 999999999999999977664 9999999998765432110 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
+||+.|+|||++.+..++.++|||||||++|||++| .+||.... ......+.......+...++++.+||.+||
T Consensus 350 ~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG-~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL 428 (543)
T 3c4z_A 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA-RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428 (543)
T ss_dssp CSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHS
T ss_pred cCCccccChhhhcCCCCChHHhcCcchHHHHHHHhC-CCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhc
Confidence 799999999999999999999999999999999996 66775431 222222333333445667899999999999
Q ss_pred cCCCCCCcC-----HHHHHcCCCCCCccch
Q 002343 779 DPNPDLRPK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 779 ~~DP~~RPT-----a~evL~HPff~~~~~~ 803 (934)
+.||++||+ ++++++||||.+.++.
T Consensus 429 ~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~ 458 (543)
T 3c4z_A 429 QKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458 (543)
T ss_dssp CSSGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred cCCHhHCCCCcccCHHHHHcCccccCCCHH
Confidence 999999996 5899999999887654
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=380.51 Aligned_cols=255 Identities=28% Similarity=0.320 Sum_probs=194.4
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhC-CCC-----ceeEEEEEEec
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASD-QHP-----NIVRWYGVESD 538 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l-~Hp-----NIV~l~g~~~~ 538 (934)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.+ .|+ +|+++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVR-LLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHH-HHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHH-HHHHHHhcccccceeEEEeeeeecc
Confidence 456678899999999999999999854 4688999999975432 23344554 33333 344 59999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+..|||||+|.++|.+++... ...++++..++.++.||+.|
T Consensus 128 ~~~~~lv~e~~~~~L~~~l~~~--------------------------------------~~~~~~~~~~~~i~~qi~~a 169 (382)
T 2vx3_A 128 RNHLCLVFEMLSYNLYDLLRNT--------------------------------------NFRGVSLNLTRKFAQQMCTA 169 (382)
T ss_dssp TTEEEEEEECCCCBHHHHHHHT--------------------------------------TTSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCCHHHHHhhc--------------------------------------CcCCCCHHHHHHHHHHHHHH
Confidence 9999999999988877766321 12457888999999999999
Q ss_pred HHHHH--HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 619 LSHLH--EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 619 L~yLH--s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
|+||| +.|||||||||+|||++.++...+||+|||+|+.......
T Consensus 170 l~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------- 216 (382)
T 2vx3_A 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY--------------------------------- 216 (382)
T ss_dssp HHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC---------------------------------
T ss_pred HHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccc---------------------------------
Confidence 99999 5799999999999999765555699999999987643211
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccc-------------
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDL------------- 761 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~------------- 761 (934)
..+||+.|+|||++.+..++.++|||||||++|||++| .+||..... ... .+.......
T Consensus 217 -----~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 290 (382)
T 2vx3_A 217 -----QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARK 290 (382)
T ss_dssp -----SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHH
T ss_pred -----cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHH
Confidence 14689999999999999999999999999999999996 667754322 211 111100000
Q ss_pred ----------------------ccc----------------------------CCCHHHHHHHHHcccCCCCCCcCHHHH
Q 002343 762 ----------------------FLV----------------------------EHIPEAVDLFTRLLDPNPDLRPKAQNV 791 (934)
Q Consensus 762 ----------------------~~~----------------------------~~~~e~~dLI~~~L~~DP~~RPTa~ev 791 (934)
..+ ...+++++||.+||+.||++|||++|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~ 370 (382)
T 2vx3_A 291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370 (382)
T ss_dssp HEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred HHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHH
Confidence 000 001378999999999999999999999
Q ss_pred HcCCCCCCc
Q 002343 792 LNHPFFWTA 800 (934)
Q Consensus 792 L~HPff~~~ 800 (934)
|+||||...
T Consensus 371 L~hp~f~~~ 379 (382)
T 2vx3_A 371 LQHSFFKKT 379 (382)
T ss_dssp TTSGGGCC-
T ss_pred hcCcccccC
Confidence 999999654
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=389.70 Aligned_cols=260 Identities=28% Similarity=0.404 Sum_probs=194.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVE 536 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~ 536 (934)
..+.+.|.+.+.||+|+||+||++.. .+++.||||++.+... ....+|+. +++.++|||||++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~ 209 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE-ILKKLNHPCIIKIKNFF 209 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHH-HHHHCCCTTBCCCCEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHH-HHHhCCCCCEeeEEEEE
Confidence 44567899999999999999999854 5689999999875421 12456665 78889999999999998
Q ss_pred ecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHH
Q 002343 537 SDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (934)
Q Consensus 537 ~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qI 615 (934)
.. +..|+|||||.+ +|.+++. ....+++.+++.++.||
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~----------------------------------------~~~~~~~~~~~~i~~qi 248 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVV----------------------------------------GNKRLKEATCKLYFYQM 248 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTS----------------------------------------SSCCCCHHHHHHHHHHH
T ss_pred ec-CceEEEEEcCCCCcHHHHHh----------------------------------------ccCCCCHHHHHHHHHHH
Confidence 65 458999997754 4444331 13457888999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 616 VSGLSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 616 a~gL~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
+.||+|||++||+||||||+|||++.++ ...+||+|||+|+.+.....
T Consensus 249 ~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------- 297 (419)
T 3i6u_A 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL------------------------------- 297 (419)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------------------------------
T ss_pred HHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc-------------------------------
Confidence 9999999999999999999999997533 34699999999987643211
Q ss_pred cccceeecCCCCCccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcccc----cccC
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKDL----FLVE 765 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~~----~~~~ 765 (934)
....+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .....+...... ....
T Consensus 298 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~ 371 (419)
T 3i6u_A 298 -----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 371 (419)
T ss_dssp ------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHS-SCSSCCCSSSCCHHHHHHTTCCCCCHHHHTT
T ss_pred -----ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHC-CCCCCCCcchHHHHHHHhcCCCCCCchhhcc
Confidence 012569999999999864 5789999999999999999996 777754321 122222222111 1234
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhh
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 807 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl 807 (934)
.++++.+||.+||+.||++|||++|+|+||||.+.+.+..+.
T Consensus 372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~~ 413 (419)
T 3i6u_A 372 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 413 (419)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHHHHH
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHHHHH
Confidence 678999999999999999999999999999998776654443
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=381.55 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=182.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC---
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--- 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--- 539 (934)
..+.++|.+.+.||+|+||+||++. ..+|+.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~ 103 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGLLDVFTPARSL 103 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEecCCcc
Confidence 3566889999999999999999985 46789999999865422 23456665 77889999999999998764
Q ss_pred ---CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 540 ---DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 540 ---~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
...|+|||+|+++|.+++. ...+++.+++.++.||+
T Consensus 104 ~~~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~l~~~~~~~i~~qi~ 142 (367)
T 2fst_X 104 EEFNDVYLVTHLMGADLNNIVK-----------------------------------------CQKLTDDHVQFLIYQIL 142 (367)
T ss_dssp GGCCCCEEEEECCCEECC----------------------------------------------CCCCHHHHHHHHHHHH
T ss_pred ccCCeEEEEecccCCCHHHHHh-----------------------------------------cCCCCHHHHHHHHHHHH
Confidence 5689999999877776652 23467888999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++ .+||+|||+|+......
T Consensus 143 ~aL~~LH~~givH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~~~~---------------------------------- 186 (367)
T 2fst_X 143 RGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTADEM---------------------------------- 186 (367)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECC---------------------------------------------
T ss_pred HHHHHHHHCCeeeCCCCHhhEEECCCC--CEEEeeccccccccccC----------------------------------
Confidence 999999999999999999999997665 49999999998643211
Q ss_pred cceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhh----------------
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKD---------------- 757 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~---------------- 757 (934)
+..+||+.|+|||++.+ ..++.++|||||||++|||++| .+||..... ... .+...
T Consensus 187 ----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 187 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred ----CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 11468999999999987 6789999999999999999996 666654322 211 11110
Q ss_pred -------ccc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 -------RKD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 -------~~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
... ......++++.+||.+||+.||++|||+.|+|+||||...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence 000 0012346789999999999999999999999999999754
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=361.19 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=196.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC---------hhHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
+.+.|.+.+.||+|+||+||++... +|+.||||.+.... .+...+|+. +++.++||||+++++++.+.+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN-ILREIRHPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHH-HHHhCCCCCeeehhheecCCC
Confidence 3467999999999999999998654 68999999987542 234456665 778899999999999999999
Q ss_pred eEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..|+|||+|. ++|.+++ .. ...+++.+++.++.||+.||
T Consensus 82 ~~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~~i~~~l 121 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFL-----------AE-----------------------------KESLTEDEATQFLKQILDGV 121 (283)
T ss_dssp EEEEEEECCCSCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEeecCCCcHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHH
Confidence 9999999775 3454443 21 23567889999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCC--CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
+|||++||+||||||+|||++.++ ...+||+|||+++........
T Consensus 122 ~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------- 168 (283)
T 3bhy_A 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--------------------------------- 168 (283)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------------------------------------
T ss_pred HHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc---------------------------------
Confidence 999999999999999999997654 235999999999876432211
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccc----cccCCCHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDL----FLVEHIPEAVD 772 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~----~~~~~~~e~~d 772 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+...... .....++++.+
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T 3bhy_A 169 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKD 244 (283)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHH
T ss_pred ---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHC-CCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHH
Confidence 114589999999999999999999999999999999996 66665433 2222222222111 12345788999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||.+||+.||++|||+.++++||||..
T Consensus 245 li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 245 FIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred HHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 999999999999999999999999954
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=362.23 Aligned_cols=251 Identities=27% Similarity=0.388 Sum_probs=200.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..++|.+.+.||+|+||+||++... +++.||+|++.+.. .+...+|+. +++.++||||+++++++.+.+..|
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS-IHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHH-HHHhCCCCCEeeeeeeeccCCEEE
Confidence 4578999999999999999998554 58899999986542 123345554 788899999999999999999999
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||+|.+ +|.+++ .. ...+++.+++.++.||+.||+||
T Consensus 92 lv~e~~~~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~l 131 (294)
T 2rku_A 92 VVLELCRRRSLLELH-----------KR-----------------------------RKALTEPEARYYLRQIVLGCQYL 131 (294)
T ss_dssp EEEECCTTCBHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997763 444433 11 24567889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++......... ..
T Consensus 132 H~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~-----------------------------------~~ 174 (294)
T 2rku_A 132 HRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERK-----------------------------------KV 174 (294)
T ss_dssp HHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCSTTCCB-----------------------------------CC
T ss_pred HHCCccccCCChHhEEEcCCC--CEEEEeccCceecccCcccc-----------------------------------cc
Confidence 999999999999999997665 49999999998765322111 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||..... .....+.......+...++++.+||.+||+.|
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 253 (294)
T 2rku_A 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 253 (294)
T ss_dssp CCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred ccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcccC
Confidence 4689999999999998899999999999999999996 667765432 22233333333344556789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCc
Q 002343 782 PDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~ 800 (934)
|++|||++++++||||...
T Consensus 254 p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 254 PTARPTINELLNDEFFTSG 272 (294)
T ss_dssp GGGSCCGGGGGGSHHHHTS
T ss_pred hhhCcCHHHHhhChheecC
Confidence 9999999999999999654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=357.73 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=193.1
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
....+.|.+.+.||+|+||+||++... +|+.||||++.... .+...+|+. +++.++||||+++++++.+.+.
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHH-HHhcCCCCCEeEEEEEEecCCe
Confidence 444567899999999999999998654 79999999986432 123455655 7788999999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||+|.+ +|.+++ .. ...+++.+++.++.||+.||+
T Consensus 86 ~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi~~~l~ 125 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYI-----------CK-----------------------------HGRVEEMEARRLFQQILSAVD 125 (276)
T ss_dssp EEEEEECCCSCBHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccCCCcHHHHH-----------hc-----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 9999997753 555544 21 234678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||++.........
T Consensus 126 ~lH~~~i~H~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~------------------------------------ 167 (276)
T 2h6d_A 126 YCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFL------------------------------------ 167 (276)
T ss_dssp HHHHHCSSCCCCCGGGEEECTTS--CEEECCCCGGGCCCC----------------------------------------
T ss_pred HHHHCCCccCCCChhhEEECCCC--CEEEeecccccccCCCcce------------------------------------
Confidence 99999999999999999997665 4999999999876442210
Q ss_pred ecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
....||+.|+|||++.+..+ +.++|||||||++|+|++| .+||... .......+.......+...++++.+||.+||
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 246 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG-TLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHML 246 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHc
Confidence 11458999999999988766 7899999999999999996 6677554 3333333333333344456789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~ 800 (934)
+.||++|||+.++++||||+..
T Consensus 247 ~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 247 QVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp CSSGGGSCCHHHHHHSHHHHTT
T ss_pred cCChhhCCCHHHHHhChhhccC
Confidence 9999999999999999999653
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=370.99 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=200.8
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
..++|.+.+.||+|+||+||++.. .+++.||+|++.+.. .+...+|+. +++.++||||+++++++.+.+..|
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEIS-IHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEecCCeEE
Confidence 456799999999999999999855 458899999986542 123445554 788899999999999999999999
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||.+ +|.+++ .. ...+++.+++.++.||+.||+||
T Consensus 118 lv~e~~~~~~L~~~~-----------~~-----------------------------~~~l~~~~~~~i~~qi~~aL~~L 157 (335)
T 2owb_A 118 VVLELCRRRSLLELH-----------KR-----------------------------RKALTEPEARYYLRQIVLGCQYL 157 (335)
T ss_dssp EEECCCTTCBHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHH-----------hc-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997763 444433 11 24567889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++......... ..
T Consensus 158 H~~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~ 200 (335)
T 2owb_A 158 HRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERK-----------------------------------KV 200 (335)
T ss_dssp HHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECCSTTCCB-----------------------------------CC
T ss_pred HHCCCEecCCCchhEEEcCCC--CEEEeeccCceecccCcccc-----------------------------------cc
Confidence 999999999999999997665 49999999998765332111 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+.......+...++++.+||.+||+.|
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (335)
T 2owb_A 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 279 (335)
T ss_dssp CCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred cCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHC-cCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCC
Confidence 4699999999999998999999999999999999996 66776543 222333333333344556789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCcc
Q 002343 782 PDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~~ 801 (934)
|++|||+.++++||||....
T Consensus 280 p~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 280 PTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp GGGSCCGGGGGGSHHHHTSC
T ss_pred hhHCcCHHHHhcCccccCCC
Confidence 99999999999999997543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=376.29 Aligned_cols=248 Identities=26% Similarity=0.436 Sum_probs=192.5
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++...+..
T Consensus 38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLDVFTPASSL 116 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSS
T ss_pred ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHH-HHHhcCCCCchhhhhheeccCCc
Confidence 35678899999999999999999854 5689999999975432 23445554 78889999999999999887654
Q ss_pred ------EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 543 ------YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 543 ------yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
|+|||+|.++|.+++ ...+++.+++.++.||+
T Consensus 117 ~~~~~~~lv~e~~~~~l~~~~------------------------------------------~~~~~~~~~~~i~~qi~ 154 (371)
T 4exu_A 117 RNFYDFYLVMPFMQTDLQKIM------------------------------------------GMEFSEEKIQYLVYQML 154 (371)
T ss_dssp TTCCCCEEEEECCCEEHHHHT------------------------------------------TSCCCHHHHHHHHHHHH
T ss_pred ccceeEEEEEccccccHHHHh------------------------------------------hcCCCHHHHHHHHHHHH
Confidence 999999887655443 23367888999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++. +||+|||+|+......
T Consensus 155 ~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~~~~---------------------------------- 198 (371)
T 4exu_A 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADAEM---------------------------------- 198 (371)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECSTTCC-----------------------------------------
T ss_pred HHHHHHHHCCCcCCCcCHHHeEECCCCC--EEEEecCcccccccCc----------------------------------
Confidence 9999999999999999999999976654 9999999998653321
Q ss_pred cceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhhc---------------
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKDR--------------- 758 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~~--------------- 758 (934)
+..+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||..... .. ..+....
T Consensus 199 ----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 199 ----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred ----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence 11468999999999987 6789999999999999999996 667754322 11 1111100
Q ss_pred --------cc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 --------KD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 --------~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. ......++++.+||.+||+.||++|||+.|+|+||||...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 00 0112347899999999999999999999999999999754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=372.12 Aligned_cols=261 Identities=24% Similarity=0.306 Sum_probs=199.2
Q ss_pred eeecceEEEe-eeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFN-KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~-~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
..+.++|.+. +.||+|+||+||++.. .+|+.||||++.+.. .....+|+..+....+||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 4456677776 8899999999999855 468999999987532 24566777755555578999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++... ....+++.+++.++.||+.||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~--------------------------------------~~~~~~~~~~~~i~~ql~~~L~ 145 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPE--------------------------------------LAEMVSENDVIRLIKQILEGVY 145 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSC--------------------------------------C-CCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCcHHHHHHHh--------------------------------------cccCCCHHHHHHHHHHHHHHHH
Confidence 9999998875 555554110 0245788899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
|||++||+||||||+|||++... ...+||+|||+++.+......
T Consensus 146 ~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~----------------------------------- 190 (327)
T 3lm5_A 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL----------------------------------- 190 (327)
T ss_dssp HHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------------------------------------
T ss_pred HHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc-----------------------------------
Confidence 99999999999999999997511 235999999999876432211
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhccc---ccccCCCHHHHHHH
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRKD---LFLVEHIPEAVDLF 774 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~~---~~~~~~~~e~~dLI 774 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||..... .... +...... ......++++.+||
T Consensus 191 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 268 (327)
T 3lm5_A 191 -REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH-TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred -ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHH
Confidence 114699999999999999999999999999999999996 666654332 2222 2222111 12234578999999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCCCccchh
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~~~~~~~ 804 (934)
.+||+.||++|||++++|+||||...+...
T Consensus 269 ~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~ 298 (327)
T 3lm5_A 269 QSLLVKNPEKRPTAEICLSHSWLQQWDFEN 298 (327)
T ss_dssp HHHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred HHHcCCChhhCcCHHHHhCCHhhccccccc
Confidence 999999999999999999999998766543
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=371.72 Aligned_cols=263 Identities=22% Similarity=0.334 Sum_probs=196.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++...
T Consensus 7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 85 (353)
T 2b9h_A 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-ILKHFKHENIITIFNIQRPDSFEN 85 (353)
T ss_dssp CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHH-HHHHCCCTTBCCEEEECCCSCSTT
T ss_pred cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHH-HHHhCcCCCcCCeeeeecccccCc
Confidence 34667899999999999999999855 4689999999965432 23346665 77889999999999988764
Q ss_pred -CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 -~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
...|+|||+|.++|.+++. ...+++.+++.++.||+.|
T Consensus 86 ~~~~~lv~e~~~~~L~~~~~-----------------------------------------~~~~~~~~~~~~~~qi~~~ 124 (353)
T 2b9h_A 86 FNEVYIIQELMQTDLHRVIS-----------------------------------------TQMLSDDHIQYFIYQTLRA 124 (353)
T ss_dssp CCCEEEEECCCSEEHHHHHH-----------------------------------------HCCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEeccCccHHHHHh-----------------------------------------hcCCCHHHHHHHHHHHHHH
Confidence 6799999998877665542 2346788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+|+.+............ ...
T Consensus 125 L~~LH~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~-------------------------~~~ 177 (353)
T 2b9h_A 125 VKVLHGSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESAADNSEPTG-------------------------QQS 177 (353)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECC---------------------------------------
T ss_pred HHHHHHCCeecCCCCHHHeEEcCCC--cEEEEecccccccccccccccCccc-------------------------ccc
Confidence 9999999999999999999997665 4999999999877543221110000 000
Q ss_pred eeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-h-------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-K------------------- 756 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~------------------- 756 (934)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||...... ....+ .
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2b9h_A 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256 (353)
T ss_dssp --CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHH
T ss_pred chhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCchhccccccccchh
Confidence 0112579999999998865 6789999999999999999996 6677543322 11111 0
Q ss_pred -----hccc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 757 -----DRKD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 757 -----~~~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.... ......++++.+||.+||+.||++|||+.|+++||||....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000 01134568899999999999999999999999999997643
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=364.22 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=198.9
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE--ecCcEEEEEEeecCCh-----hHHHHHHHH--HHHhCCCCceeEEEEEEe--
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKTHH-----DVALKEIQN--LIASDQHPNIVRWYGVES-- 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~--~~g~~VAVK~l~~~~~-----~~~~~Ei~~--ll~~l~HpNIV~l~g~~~-- 537 (934)
....+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+.. .+..++||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 34567899999999999999999866 4688999999864321 234556542 234458999999999987
Q ss_pred ---cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 538 ---DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 538 ---~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
.....|+|||+|.++|.+++... ...++++.+++.++.|
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~l~~~--------------------------------------~~~~~~~~~~~~~~~q 128 (326)
T 1blx_A 87 RTDRETKLTLVFEHVDQDLTTYLDKV--------------------------------------PEPGVPTETIKDMMFQ 128 (326)
T ss_dssp ECSSEEEEEEEEECCSCBHHHHHHHS--------------------------------------CTTCSCHHHHHHHHHH
T ss_pred ccCCCceEEEEEecCCCCHHHHHHhc--------------------------------------ccCCCCHHHHHHHHHH
Confidence 56789999998887777665321 1234688899999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
|+.||+|||++||+||||||+|||++.++. +||+|||+++........
T Consensus 129 i~~~l~~lH~~gi~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~------------------------------ 176 (326)
T 1blx_A 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMAL------------------------------ 176 (326)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECSCCSCCCCCGGGGG------------------------------
T ss_pred HHHHHHHHHHCCceeccCCHHHeEEcCCCC--EEEecCcccccccCCCCc------------------------------
Confidence 999999999999999999999999976654 999999999865432110
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhcc-------------
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRK------------- 759 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~------------- 759 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||...... . ..+.....
T Consensus 177 ------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (326)
T 1blx_A 177 ------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249 (326)
T ss_dssp ------CCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred ------cccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHHHcCCCCcccCcccccc
Confidence 114689999999999999999999999999999999996 6677554322 1 12221100
Q ss_pred -------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 760 -------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 760 -------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
.......++++.+||.+||+.||++|||+.++++||||.+.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~ 306 (326)
T 1blx_A 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306 (326)
T ss_dssp CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred chhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence 01123456789999999999999999999999999999776543
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=374.48 Aligned_cols=254 Identities=25% Similarity=0.340 Sum_probs=196.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCC-------hhHHHHHHHHHHHhC-CCCceeEEEEEEecCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTH-------HDVALKEIQNLIASD-QHPNIVRWYGVESDQD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~-------~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~ 540 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|++ ++..+ +||||+++++++.+.+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ-VLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHH-HHHHHHTCTTBCCEEEEEEETT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHH-HHHHccCCCceeEEEEEEeeCc
Confidence 6799999999999999999865 368999999986432 233455665 44555 7999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|||||||.+ |+|.+++.. ...+++.+++.++.||+.||+
T Consensus 133 ~~~lv~e~~~~----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~aL~ 173 (355)
T 1vzo_A 133 KLHLILDYING----------GELFTHLSQ-----------------------------RERFTEHEVQIYVGEIVLALE 173 (355)
T ss_dssp EEEEEECCCCS----------CBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecCCC----------CCHHHHHHH-----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 99999997653 444444322 235678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++.+........
T Consensus 174 ~LH~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~---------------------------------- 217 (355)
T 1vzo_A 174 HLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERA---------------------------------- 217 (355)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECCGGGGGGG----------------------------------
T ss_pred HHHHCCcccCCCCHHHEEECCCC--cEEEeeCCCCeecccCCCCcc----------------------------------
Confidence 99999999999999999997665 499999999987643221110
Q ss_pred ecCCCCCccccchhcccC--CCcccccccchhhhhHHhhcCCCCCCCCc-----hhHHHHHHhhcccccccCCCHHHHHH
Q 002343 701 TVGYGSSGWQAPEQLLQG--RQTRAIDLFSLGCILFFCITGGKHPYGES-----FERDANIVKDRKDLFLVEHIPEAVDL 773 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~--~~t~ksDIWSLGvILyeLltGg~~Pf~~~-----~~~~~~i~~~~~~~~~~~~~~e~~dL 773 (934)
...+||+.|+|||++.+. .++.++|||||||++|||++| .+||... .......+.......+...++++.+|
T Consensus 218 ~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 296 (355)
T 1vzo_A 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG-ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDL 296 (355)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHS-SCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHC-CCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHH
Confidence 114699999999999863 478999999999999999996 6676432 12222222233334455677899999
Q ss_pred HHHcccCCCCCCc-----CHHHHHcCCCCCCccch
Q 002343 774 FTRLLDPNPDLRP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 774 I~~~L~~DP~~RP-----Ta~evL~HPff~~~~~~ 803 (934)
|.+||+.||++|| +++|+++||||...++.
T Consensus 297 i~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~ 331 (355)
T 1vzo_A 297 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD 331 (355)
T ss_dssp HHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHH
T ss_pred HHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChh
Confidence 9999999999999 99999999999876543
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=364.30 Aligned_cols=262 Identities=25% Similarity=0.352 Sum_probs=206.5
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHH-HHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 345688899999999999999854 5689999999965432 34455655 77889999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|++ +|.+++ . ...+++.+++.++.||+.||+|||+
T Consensus 99 ~e~~~~~~L~~~~-----------~------------------------------~~~~~~~~~~~~~~qi~~~l~~lH~ 137 (303)
T 3a7i_A 99 MEYLGGGSALDLL-----------E------------------------------PGPLDETQIATILREILKGLDYLHS 137 (303)
T ss_dssp EECCTTEEHHHHH-----------T------------------------------TSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHH-----------h------------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997764 444433 1 2346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++.+....... ....
T Consensus 138 ~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~ 180 (303)
T 3a7i_A 138 EKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKR-----------------------------------NTFV 180 (303)
T ss_dssp TTEECCCCSGGGEEECTTS--CEEECCCTTCEECBTTBCCB-----------------------------------CCCC
T ss_pred CCCccCCCChheEEECCCC--CEEEeecccceecCcccccc-----------------------------------CccC
Confidence 9999999999999997665 49999999998765432110 1146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.|+|||++.+..++.++|||||||++|+|++| .+||...... .. .+............++++.+||.+||+.||
T Consensus 181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 259 (303)
T 3a7i_A 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG-EPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 259 (303)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSG
T ss_pred CCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccC-CCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCCh
Confidence 89999999999999999999999999999999996 6677654322 22 222233333344567899999999999999
Q ss_pred CCCcCHHHHHcCCCCCCccchhhhhhhhcc
Q 002343 783 DLRPKAQNVLNHPFFWTADTRLSFLRDVSD 812 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~~~~~fl~~~sd 812 (934)
++|||+.++++||||.....+..++.++.+
T Consensus 260 ~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~ 289 (303)
T 3a7i_A 260 SFRPTAKELLKHKFILRNAKKTSYLTELID 289 (303)
T ss_dssp GGSCCHHHHTTCHHHHHHCCCGGGGHHHHH
T ss_pred hhCcCHHHHhhChhhhcCCCccHHHHHHHH
Confidence 999999999999999776665555554443
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-41 Score=391.82 Aligned_cols=254 Identities=26% Similarity=0.427 Sum_probs=199.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
..+.++|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+.+.
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~ 100 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ-LLKQLDHPNIMKLYEFFEDKGY 100 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSE
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCCE
Confidence 34667899999999999999999855 478999999986432 234566765 7888999999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||+|.+ |+|.+++.. ...+++.+++.++.||+.||+|
T Consensus 101 ~~lv~e~~~~----------~~L~~~~~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 101 FYLVGEVYTG----------GELFDEIIS-----------------------------RKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp EEEEECCCCS----------CBHHHHHHT-----------------------------CSCCBHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 9999997753 333333221 3456788999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecC-CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 622 LHEIGLIHRDLKPQNVLISKD-KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d-~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
||++||+||||||+|||++.. ....+||+|||+|+.+......
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 185 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM------------------------------------ 185 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH------------------------------------
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc------------------------------------
Confidence 999999999999999999532 2345999999999876543211
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-c---ccccCCCHHHHHHHH
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK-D---LFLVEHIPEAVDLFT 775 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~-~---~~~~~~~~e~~dLI~ 775 (934)
...+||+.|+|||++.+ .++.++|||||||++|+|++| .+||..... .....+.... . ......++++++||.
T Consensus 186 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 263 (484)
T 3nyv_A 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG-CPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263 (484)
T ss_dssp HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHH
T ss_pred ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHH
Confidence 11469999999999876 799999999999999999996 667765433 2222222222 1 112356789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
+||+.||++|||+.|+|+||||...
T Consensus 264 ~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 264 KMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHCCCChhHCcCHHHHhhChhhccc
Confidence 9999999999999999999999543
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=364.01 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=196.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
..+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA-VLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHH-HHHhCCCCCeeehhhhcccCCEEEE
Confidence 34567899999999999999999855 4799999999975432 23455665 7788899999999999999999999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||+|.+ +|.+++ .. ...+++.+++.++.||+.||+|||
T Consensus 84 v~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi~~~l~~lH 123 (304)
T 2jam_A 84 VMQLVSGGELFDRI-----------LE-----------------------------RGVYTEKDASLVIQQVLSAVKYLH 123 (304)
T ss_dssp EECCCCSCBHHHHH-----------HH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCccHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9997753 444443 21 234678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++||+||||||+|||+.. +....+||+|||+++....... ..
T Consensus 124 ~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------~~ 166 (304)
T 2jam_A 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-------------------------------------ST 166 (304)
T ss_dssp HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT-------------------------------------HH
T ss_pred HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc-------------------------------------cc
Confidence 999999999999999932 2234599999999875432110 01
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhccc----ccccCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDRKD----LFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~~~----~~~~~~~~e~~dLI~~~ 777 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+..... ......++++.+||.+|
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 245 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG-YPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999996 66665433 222222222211 12234578999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCCc
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~~ 800 (934)
|+.||++|||+.++++||||...
T Consensus 246 l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 246 LEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp HCSSTTTSCCHHHHHTSHHHHSS
T ss_pred cCCChhHCcCHHHHhcCccccCC
Confidence 99999999999999999999653
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=356.23 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=197.1
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. +++.++||||+++++++.+++..|+|||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 356889999999999999998877889999999976542 34556665 888999999999999999999999999976
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
++ |+|.+++... ...+++..++.++.||+.||+|||++||+|
T Consensus 88 ~~----------~~L~~~l~~~----------------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (269)
T 4hcu_A 88 EH----------GCLSDYLRTQ----------------------------RGLFAAETLLGMCLDVCEGMAYLEEACVIH 129 (269)
T ss_dssp TT----------CBHHHHHHTT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CC----------CcHHHHHHhc----------------------------CcccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 53 3444433211 234678889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.......... ....||+.|
T Consensus 130 ~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~y 173 (269)
T 4hcu_A 130 RDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSS----------------------------------TGTKFPVKW 173 (269)
T ss_dssp SCCCGGGEEECGGG--CEEECCTTGGGGBCCHHHHST----------------------------------TSTTCCGGG
T ss_pred CCcchheEEEcCCC--CEEeccccccccccccccccc----------------------------------cCccccccc
Confidence 99999999997665 499999999987644221110 013578899
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|+|++++.+||....... .. +........+...++++.+||.+||+.||++|||
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 253 (269)
T 4hcu_A 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 253 (269)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcC
Confidence 999999999999999999999999999996688887654332 22 2222233334446789999999999999999999
Q ss_pred HHHHHcC
Q 002343 788 AQNVLNH 794 (934)
Q Consensus 788 a~evL~H 794 (934)
+.++++|
T Consensus 254 ~~~ll~~ 260 (269)
T 4hcu_A 254 FSRLLRQ 260 (269)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999976
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=371.39 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=191.9
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh-----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~-----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
-++|.+.+.||+|+||+||++.. .+|+.||||++...... ...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK-LLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHH-HHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 35788999999999999999855 45899999998654332 2345554 78889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|++++.+.+.. ...++++..++.++.||+.||+|||++
T Consensus 103 ~e~~~~~~l~~~~~---------------------------------------~~~~~~~~~~~~~~~qi~~~l~~LH~~ 143 (331)
T 4aaa_A 103 FEFVDHTILDDLEL---------------------------------------FPNGLDYQVVQKYLFQIINGIGFCHSH 143 (331)
T ss_dssp EECCSEEHHHHHHH---------------------------------------STTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCcchHHHHHh---------------------------------------hccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99887643332211 134578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++.+....... ....|
T Consensus 144 ~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~ 186 (331)
T 4aaa_A 144 NIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVY-----------------------------------DDEVA 186 (331)
T ss_dssp TCCCCCCCGGGEEECTTS--CEEECCCTTC-----------------------------------------------CCC
T ss_pred CEEccCcChheEEEcCCC--cEEEEeCCCceeecCCcccc-----------------------------------CCCcC
Confidence 999999999999997665 49999999998664422110 11468
Q ss_pred CCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhccc----------------------
Q 002343 706 SSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKD---------------------- 760 (934)
Q Consensus 706 T~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~---------------------- 760 (934)
|+.|+|||++.+. .++.++|||||||++|+|++| .+||....... ..+......
T Consensus 187 t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (331)
T 4aaa_A 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE 265 (331)
T ss_dssp CCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred CccccCcccccCCCCcchHHHHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence 9999999999875 689999999999999999996 66775443221 111110000
Q ss_pred --------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccch
Q 002343 761 --------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803 (934)
Q Consensus 761 --------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~ 803 (934)
......++++.+||.+||+.||++|||+.|+|+||||......
T Consensus 266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 316 (331)
T 4aaa_A 266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316 (331)
T ss_dssp CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGHH
T ss_pred ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCChh
Confidence 0012346789999999999999999999999999999655433
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=370.30 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=194.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC-----------hhHHHHHHHHHHHhC-CCCceeEEEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH-----------HDVALKEIQNLIASD-QHPNIVRWYGVE 536 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~-----------~~~~~~Ei~~ll~~l-~HpNIV~l~g~~ 536 (934)
.+.+.|.+.+.||+|+||.||++... +|+.||||++.... .+...+|+. ++..+ +||||+++++++
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH-ILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHH-HHHHhcCCCCEeEEEEEE
Confidence 34567999999999999999998664 79999999986543 122345555 45555 899999999999
Q ss_pred ecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 537 SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 537 ~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
...+..|+|||||.+ |+|.+++.. ...+++..++.++.||+
T Consensus 170 ~~~~~~~lv~e~~~g----------~~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~ 210 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRK----------GELFDYLTE-----------------------------KVALSEKETRSIMRSLL 210 (365)
T ss_dssp EBSSEEEEEECCCTT----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHH
T ss_pred eeCCEEEEEEEeCCC----------CcHHHHHHh-----------------------------cCCCCHHHHHHHHHHHH
Confidence 999999999996654 344443321 23567888999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++. +||+|||++..+......
T Consensus 211 ~~L~~LH~~gi~H~Dlkp~NIl~~~~~~--ikl~DfG~~~~~~~~~~~-------------------------------- 256 (365)
T 2y7j_A 211 EAVSFLHANNIVHRDLKPENILLDDNMQ--IRLSDFGFSCHLEPGEKL-------------------------------- 256 (365)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB--------------------------------
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEecCcccccCCCccc--------------------------------
Confidence 9999999999999999999999976654 999999999876543211
Q ss_pred cceeecCCCCCccccchhccc------CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHH-hhccccc---ccC
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQ------GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIV-KDRKDLF---LVE 765 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~-~~~~~~~---~~~ 765 (934)
...+||+.|+|||++.+ ..++.++|||||||++|+|++| .+||.... ......+ ....... ...
T Consensus 257 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 331 (365)
T 2y7j_A 257 ----RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG-SPPFWHRRQILMLRMIMEGQYQFSSPEWDD 331 (365)
T ss_dssp ----CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCHHHHSS
T ss_pred ----ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCCccccc
Confidence 11569999999999863 3588999999999999999996 66665432 2222222 2221111 234
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
.++++.+||.+||+.||++|||+.++|+||||.
T Consensus 332 ~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 578899999999999999999999999999995
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=389.28 Aligned_cols=251 Identities=26% Similarity=0.393 Sum_probs=195.4
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.+.|.+.+.||+|+||+||++.. .+++.||||++.+.. .....+|+. +++.++|||||++++++.+.+..|
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVA-VLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHH-HHHhCCCCCCCeEEEEEEeCCEEE
Confidence 4567899999999999999999855 468999999987542 234556665 888999999999999999999999
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||.+ +|.+.+ .. ...+++.+++.++.||+.||+||
T Consensus 113 lv~e~~~~g~L~~~~-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 113 LVMECYKGGELFDEI-----------IH-----------------------------RMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp EEEECCCSCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997764 444433 21 34567888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|++|||||||||+|||++..+ ...+||+|||+|+........ .
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~------------------------------------~ 196 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM------------------------------------K 196 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB------------------------------------C
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc------------------------------------c
Confidence 999999999999999997532 345999999999876543211 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcccc----cccCCCHHHHHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRKDL----FLVEHIPEAVDLFTR 776 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~~~----~~~~~~~e~~dLI~~ 776 (934)
..+||+.|+|||++. ..++.++|||||||++|+|++| .+||..... .....+...... .....++++++||.+
T Consensus 197 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 274 (494)
T 3lij_A 197 ERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG-YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ 274 (494)
T ss_dssp CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHH
T ss_pred ccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHH
Confidence 156999999999986 5799999999999999999996 667765433 333333222211 123467899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||+.||.+|||+.++|+||||..
T Consensus 275 ~L~~dp~~R~s~~e~l~hp~~~~ 297 (494)
T 3lij_A 275 MLQFDSQRRISAQQALEHPWIKE 297 (494)
T ss_dssp HTCSSTTTSCCHHHHHTCHHHHH
T ss_pred HCCCChhhCccHHHHhcCccccc
Confidence 99999999999999999999964
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=356.41 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=190.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec----CC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----QD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~ 540 (934)
-++.|.+.+.||+|+||+||++.. .++..||+|++..... +...+|+ .+++.++||||+++++++.+ ..
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEA-EMLKGLQHPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHH-HHHHhCCCCCeeeeeeeeccccCCCc
Confidence 456789999999999999999854 5688999999875432 2234454 47888999999999998875 46
Q ss_pred eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
.+|+|||||++ +|.+++ .. ...+++..++.++.||+.||
T Consensus 103 ~~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi~~~l 142 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYL-----------KR-----------------------------FKVMKIKVLRSWCRQILKGL 142 (290)
T ss_dssp EEEEEEECCCSCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCHHHHH-----------HH-----------------------------ccCCCHHHHHHHHHHHHHHH
Confidence 79999997753 444443 21 24467888999999999999
Q ss_pred HHHHHCC--CcccCCCCCeEEEe-cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 620 SHLHEIG--LIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 620 ~yLHs~g--IVHRDLKP~NILl~-~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
+|||+++ |+||||||+|||++ .++ .+||+|||++........
T Consensus 143 ~~lH~~~~~i~H~dikp~Nil~~~~~~--~~kl~Dfg~~~~~~~~~~--------------------------------- 187 (290)
T 1t4h_A 143 QFLHTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRASFA--------------------------------- 187 (290)
T ss_dssp HHHHTSSSCCCCSCCCGGGEEESSTTS--CEEECCTTGGGGCCTTSB---------------------------------
T ss_pred HHHHcCCCCEEECCCCHHHEEEECCCC--CEEEeeCCCccccccccc---------------------------------
Confidence 9999999 99999999999996 344 599999999975433211
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc--ccccccCCCHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR--KDLFLVEHIPEAVD 772 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~--~~~~~~~~~~e~~d 772 (934)
....||+.|+|||++. +.++.++|||||||++|+|++| .+||..... .....+... ........++++.+
T Consensus 188 ----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (290)
T 1t4h_A 188 ----KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261 (290)
T ss_dssp ----EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHS-SCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred ----ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhC-CCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHH
Confidence 1146999999999886 4699999999999999999996 667754322 222222221 12233445689999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||.+||+.||++|||+.++++||||.+
T Consensus 262 li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 262 IIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHccCChhhCCCHHHHhhCccccc
Confidence 999999999999999999999999964
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=356.60 Aligned_cols=254 Identities=23% Similarity=0.361 Sum_probs=197.8
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++.+.+..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC-INKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHH-HHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 35688899999999999999865 4689999999864332 23445554 788899999999999999999999999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|+|.+ +|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 85 e~~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~ 124 (276)
T 2yex_A 85 EYCSGGELFDRIEP----------------------------------------DIGMPEPDAQRFFHQLMAGVVYLHGI 124 (276)
T ss_dssp ECCTTEEGGGGSBT----------------------------------------TTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCcHHHHHhh----------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 98864 56554410 23467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+++.+........ .....|
T Consensus 125 ~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~---------------------------------~~~~~~ 169 (276)
T 2yex_A 125 GITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRERL---------------------------------LNKMCG 169 (276)
T ss_dssp TEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEECC---------------------------------BCCCCS
T ss_pred CeeccCCChHHEEEccCCC--EEEeeCCCccccCCCcchhc---------------------------------ccCCcc
Confidence 9999999999999976654 99999999987643321110 012469
Q ss_pred CCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhH--H-HHHHhhccc-ccccCCCHHHHHHHHHcccC
Q 002343 706 SSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFER--D-ANIVKDRKD-LFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 706 T~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~-~~i~~~~~~-~~~~~~~~e~~dLI~~~L~~ 780 (934)
|+.|+|||++.+..+ +.++|||||||++|+|++| .+||...... . ......... ......++++.+||.+||+.
T Consensus 170 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 248 (276)
T 2yex_A 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVE 248 (276)
T ss_dssp CGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHS-SCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCS
T ss_pred ccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCC
Confidence 999999999988775 7899999999999999996 6777543322 1 122211111 12234678999999999999
Q ss_pred CCCCCcCHHHHHcCCCCCCccc
Q 002343 781 NPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 781 DP~~RPTa~evL~HPff~~~~~ 802 (934)
||++|||+.++++||||.....
T Consensus 249 ~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 249 NPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp STTTSCCHHHHTTCTTTTCCCC
T ss_pred CchhCCCHHHHhcCccccChhh
Confidence 9999999999999999976543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=371.90 Aligned_cols=255 Identities=25% Similarity=0.358 Sum_probs=182.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCC-------eE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQD-------FV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-------~~ 542 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++..... ....++++ .+..++||||+++++++...+ +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQ-DLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHH-HHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHH-HHHhcCCCCcccHHHhhhccccccccceeE
Confidence 5688999999999999999855 5689999999865432 33444444 566779999999999986533 38
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||.++|.+.+.. ++ .....+++..++.++.||+.||.||
T Consensus 102 ~lv~e~~~~~l~~~~~~-------~~-----------------------------~~~~~~~~~~~~~~~~qi~~al~~l 145 (360)
T 3e3p_A 102 NVVMEYVPDTLHRCCRN-------YY-----------------------------RRQVAPPPILIKVFLFQLIRSIGCL 145 (360)
T ss_dssp EEEEECCSCBHHHHHHH-------HH-----------------------------TTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecccccHHHHHHH-------Hh-----------------------------hcccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999877655421 00 1134567888999999999999999
Q ss_pred H--HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 623 H--EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 623 H--s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
| ++||+||||||+|||++... ..+||+|||+|+.+.......
T Consensus 146 H~~~~~ivH~Dlkp~NIll~~~~-~~~kl~Dfg~a~~~~~~~~~~----------------------------------- 189 (360)
T 3e3p_A 146 HLPSVNVCHRDIKPHNVLVNEAD-GTLKLCDFGSAKKLSPSEPNV----------------------------------- 189 (360)
T ss_dssp TSTTTCCBCSCCCGGGEEEETTT-TEEEECCCTTCBCCCTTSCCC-----------------------------------
T ss_pred hCCCCCeecCcCCHHHEEEeCCC-CcEEEeeCCCceecCCCCCcc-----------------------------------
Confidence 9 99999999999999997522 369999999998765432211
Q ss_pred ecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcc------------------
Q 002343 701 TVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRK------------------ 759 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~------------------ 759 (934)
...||+.|+|||++.+.. ++.++|||||||++|+|++| .+||..... ... .+.....
T Consensus 190 -~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3e3p_A 190 -AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD 267 (360)
T ss_dssp -STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGG
T ss_pred -cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhC-CCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcc
Confidence 146899999999997655 89999999999999999996 667754322 211 1111000
Q ss_pred -------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 760 -------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 760 -------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.......++++.+||.+||+.||.+|||+.|+|+||||.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 268 LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp GGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 0001113568999999999999999999999999999976544
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=362.97 Aligned_cols=255 Identities=23% Similarity=0.337 Sum_probs=197.1
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-------hhHHHHHHHHHHHhCCCCceeEEEEEEe--cCCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-------HDVALKEIQNLIASDQHPNIVRWYGVES--DQDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~--~~~~ 541 (934)
.++|.+.+.||+|+||+||++.. .+++.||||++.... .....+|+. +++.++||||+++++++. +.+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ-LLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHH-HHTTCCCTTBCCEEEEEECC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCCCe
Confidence 35688889999999999999854 568999999986532 123455655 788899999999999984 4568
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||+|.++|.+++... ....+++.+++.++.||+.||+|
T Consensus 83 ~~lv~e~~~~~l~~~~~~~--------------------------------------~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 83 MYMVMEYCVCGMQEMLDSV--------------------------------------PEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp EEEEEECCSEEHHHHHHHS--------------------------------------TTCSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEehhccCCHHHHHHhC--------------------------------------cccccCHHHHHHHHHHHHHHHHH
Confidence 9999999988766655210 13457888999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++. +||+|||+++.......... ..
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~~~~~~---------------------------------~~ 169 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGT--LKISALGVAEALHPFAADDT---------------------------------CR 169 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCSSCE---------------------------------EC
T ss_pred HHHCCeeecCCCcccEEEcCCCc--EEeeccccccccCccccccc---------------------------------cc
Confidence 99999999999999999976654 99999999987653221111 11
Q ss_pred cCCCCCccccchhcccCCC--cccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~--t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...||+.|+|||++.+... +.++|||||||++|+|++| ..||... .......+.......+...++++.+||.+||
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l 248 (305)
T 2wtk_C 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGML 248 (305)
T ss_dssp CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHT
T ss_pred cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhC-CCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHc
Confidence 2468999999999986543 7899999999999999996 5666543 3333333333333445567789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCCcc
Q 002343 779 DPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+.||++|||+.++++||||....
T Consensus 249 ~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 249 EYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp CSSTTTSCCHHHHHHSHHHHSCC
T ss_pred cCChhhCCCHHHHhcCcccccCC
Confidence 99999999999999999996544
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-42 Score=387.75 Aligned_cols=251 Identities=15% Similarity=0.150 Sum_probs=187.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHH--HHHHhCCCCceeEEE-------E
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQ--NLIASDQHPNIVRWY-------G 534 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~--~ll~~l~HpNIV~l~-------g 534 (934)
..+.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+. .+++.++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 357899999999999999999864 569999999986432 134456663 355667899999998 6
Q ss_pred EEecCC-----------------eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHh
Q 002343 535 VESDQD-----------------FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (934)
Q Consensus 535 ~~~~~~-----------------~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (934)
++.+.+ ..|||||||+++|.+++.... ... +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~-----------~~~--------------~------- 198 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL-----------SHS--------------S------- 198 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH-----------HTT--------------T-------
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc-----------ccc--------------c-------
Confidence 666554 389999988877777663210 000 0
Q ss_pred hhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhH
Q 002343 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLV 677 (934)
Q Consensus 598 ~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~ 677 (934)
....+++..++.++.||+.||+|||++|||||||||+|||++.++ .+||+|||+|+.....
T Consensus 199 -~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DFG~a~~~~~~---------------- 259 (377)
T 3byv_A 199 -THKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFLTGFEHLVRDGAR---------------- 259 (377)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCGGGCEETTCE----------------
T ss_pred -ccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEEechhheecCCc----------------
Confidence 001234567888999999999999999999999999999997665 4999999999853221
Q ss_pred HHHHHHhhhhhhccccccccceeecCCCCCccccchhcccC-----------CCcccccccchhhhhHHhhcCCCCCCCC
Q 002343 678 YLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQG-----------RQTRAIDLFSLGCILFFCITGGKHPYGE 746 (934)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~-----------~~t~ksDIWSLGvILyeLltGg~~Pf~~ 746 (934)
.+..+| +.|+|||++.+. .++.++|||||||++|||++| .+||..
T Consensus 260 ----------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg-~~Pf~~ 315 (377)
T 3byv_A 260 ----------------------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA-DLPITK 315 (377)
T ss_dssp ----------------------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS-SCCC--
T ss_pred ----------------------ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC-CCCCcc
Confidence 112467 999999999887 899999999999999999996 777754
Q ss_pred chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 747 SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 747 ~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
...... .. .........++++.+||.+||+.||++|||+.++++||||..
T Consensus 316 ~~~~~~--~~-~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 316 DAALGG--SE-WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp ----CC--SG-GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred cccccc--hh-hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 322110 00 001112456789999999999999999999999999999954
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=356.03 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=194.5
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------------hhHHHHHHHHHHHhC-CCCceeEEEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------------HDVALKEIQNLIASD-QHPNIVRWYGVE 536 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------------~~~~~~Ei~~ll~~l-~HpNIV~l~g~~ 536 (934)
..+.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+. ++..+ +||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD-ILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHH-HHHHhcCCCCEeeeeeee
Confidence 446789999999999999999855 468999999996542 123456665 44555 699999999999
Q ss_pred ecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHH
Q 002343 537 SDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (934)
Q Consensus 537 ~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qI 615 (934)
.+.+..|+|||+|.+ +|.+++ .. ...+++.+++.++.||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi 133 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYL-----------TE-----------------------------KVTLSEKETRKIMRAL 133 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHH
T ss_pred ccCCeEEEEEeccCCCcHHHHH-----------hc-----------------------------cCCCCHHHHHHHHHHH
Confidence 999999999997753 444443 21 2346788899999999
Q ss_pred HHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 616 a~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
+.||+|||++||+||||||+|||++.++. +||+|||+++.+......
T Consensus 134 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~------------------------------- 180 (298)
T 1phk_A 134 LEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL------------------------------- 180 (298)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB-------------------------------
T ss_pred HHHHHHHHHCCcccCCCCcceEEEcCCCc--EEEecccchhhcCCCccc-------------------------------
Confidence 99999999999999999999999976654 999999999876543211
Q ss_pred ccceeecCCCCCccccchhcc------cCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHH-hhcccc---ccc
Q 002343 696 GVLFFTVGYGSSGWQAPEQLL------QGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIV-KDRKDL---FLV 764 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~------~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~-~~~~~~---~~~ 764 (934)
....||+.|+|||++. ...++.++|||||||++|+|++| .+||... .......+ ...... ...
T Consensus 181 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
T 1phk_A 181 -----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-SPPFWHRKQMLMLRMIMSGNYQFGSPEWD 254 (298)
T ss_dssp -----CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTGG
T ss_pred -----ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC-CCCCcCccHHHHHHHHhcCCcccCccccc
Confidence 1146899999999985 45689999999999999999996 5666543 22222222 222111 113
Q ss_pred CCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 765 ~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
..++++.+||.+||+.||++|||+.++++||||....
T Consensus 255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 4578999999999999999999999999999997543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=369.24 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=194.4
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEEe-cC-cEEEEEEeecCCh--hHHHHHHHHHHHhCCCCc------eeEEEEEEe
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EG-RSVAVKRLVKTHH--DVALKEIQNLIASDQHPN------IVRWYGVES 537 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g-~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpN------IV~l~g~~~ 537 (934)
+..+.++|.+.+.||+|+||+||++... ++ +.||||++..... +...+|+. +++.++|+| ++.+++++.
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEIN-VLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHH-HHHHHhhcCCCCceeEEEeeeeee
Confidence 3567788999999999999999998553 44 7899999975432 33445554 555555544 999999999
Q ss_pred cCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 538 ~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
..+..|||||+|+++|.+++... ....+++.+++.++.||+.
T Consensus 93 ~~~~~~lv~e~~~~~l~~~l~~~--------------------------------------~~~~~~~~~~~~i~~qi~~ 134 (355)
T 2eu9_A 93 FHGHMCIAFELLGKNTFEFLKEN--------------------------------------NFQPYPLPHVRHMAYQLCH 134 (355)
T ss_dssp ETTEEEEEEECCCCBHHHHHHHT--------------------------------------TTCCCCHHHHHHHHHHHHH
T ss_pred eCCeEEEEEeccCCChHHHHHhc--------------------------------------cCCCCCHHHHHHHHHHHHH
Confidence 99999999999887776655211 1235788899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecC-----------------CCceEEEeeccccccccCCCcccccCCCCcchhhHHHH
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKD-----------------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLV 680 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d-----------------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~ 680 (934)
||+|||++||+||||||+|||+..+ ....+||+|||+++.......
T Consensus 135 ~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----------------- 197 (355)
T 2eu9_A 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT----------------- 197 (355)
T ss_dssp HHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC-----------------
T ss_pred HHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccccc-----------------
Confidence 9999999999999999999999421 234599999999986433211
Q ss_pred HHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhh-c
Q 002343 681 SILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD-R 758 (934)
Q Consensus 681 ~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~-~ 758 (934)
..+||+.|+|||++.+..++.++|||||||++|||++| .+||....... ...+.. .
T Consensus 198 ---------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 198 ---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG-FTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ---------------------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHH
T ss_pred ---------------------CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHc
Confidence 14699999999999999999999999999999999996 66776533221 111110 0
Q ss_pred ccc-------------------------------------------cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 759 KDL-------------------------------------------FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 759 ~~~-------------------------------------------~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
... .....++++.+||.+||+.||++|||+.|+|+||
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 335 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHP 335 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000 0001124788999999999999999999999999
Q ss_pred CCCCccc
Q 002343 796 FFWTADT 802 (934)
Q Consensus 796 ff~~~~~ 802 (934)
||...+.
T Consensus 336 ~f~~~~~ 342 (355)
T 2eu9_A 336 FFAGLTP 342 (355)
T ss_dssp GGGGCCH
T ss_pred hhcCCCh
Confidence 9976543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=352.66 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=196.4
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||+||++...++..||||++..... +...+|+. ++..++||||+++++++.+.+..|+|||+|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQ-TMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999777788999999976532 34566665 778889999999999999999999999977
Q ss_pred cC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 550 TC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 550 ~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
++ +|.+++ ... ...+++.+++.++.||+.||+|||++||+
T Consensus 86 ~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 86 SNGCLLNYL-----------RSH----------------------------GKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp TTCBHHHHH-----------HHH----------------------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCcHHHHH-----------HHc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 53 444443 221 22467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++.......... ....||+.
T Consensus 127 H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~ 170 (268)
T 3sxs_A 127 HRDLAARNCLVDRDL--CVKVSDFGMTRYVLDDQYVSS----------------------------------VGTKFPVK 170 (268)
T ss_dssp ESSCSGGGEEECTTC--CEEECCTTCEEECCTTCEEEC----------------------------------CSCCCCGG
T ss_pred cCCcCcceEEECCCC--CEEEccCccceecchhhhhcc----------------------------------cCCCcCcc
Confidence 999999999997665 499999999987654322111 01347788
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|+|++++.+||........ .+........+...++++.+||.+||+.||++||
T Consensus 171 y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 250 (268)
T 3sxs_A 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRP 250 (268)
T ss_dssp GCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSC
T ss_pred cCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCc
Confidence 99999999989999999999999999999966888865443322 2222222333444578999999999999999999
Q ss_pred CHHHHHcC
Q 002343 787 KAQNVLNH 794 (934)
Q Consensus 787 Ta~evL~H 794 (934)
|+.++++|
T Consensus 251 s~~~ll~~ 258 (268)
T 3sxs_A 251 TFQQLLSS 258 (268)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999976
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-40 Score=368.54 Aligned_cols=247 Identities=26% Similarity=0.426 Sum_probs=192.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe--
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDF-- 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~-- 541 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++||||+++++++.+.+.
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSGG
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHH-HHHhcCCCCcccHhheEecccccc
Confidence 4567899999999999999999854 5699999999965432 23445655 7788999999999999988654
Q ss_pred ----EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 542 ----VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 542 ----~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.|+|||+|.++|.+++ ...+++.+++.++.||+.
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~------------------------------------------~~~~~~~~~~~i~~qi~~ 137 (353)
T 3coi_A 100 NFYDFYLVMPFMQTDLQKIM------------------------------------------GLKFSEEKIQYLVYQMLK 137 (353)
T ss_dssp GCCCCEEEEECCSEEGGGTT------------------------------------------TSCCCHHHHHHHHHHHHH
T ss_pred cceeEEEEeccccCCHHHHh------------------------------------------cCCCCHHHHHHHHHHHHH
Confidence 5999999987766554 123678889999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 138 al~~LH~~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~----------------------------------- 180 (353)
T 3coi_A 138 GLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADAEM----------------------------------- 180 (353)
T ss_dssp HHHHHHHTTCCCSSCCGGGEEECTTC--CEEECSTTCTTC----------------------------------------
T ss_pred HHHHHHHCCcccCCCCHHHEeECCCC--cEEEeecccccCCCCCc-----------------------------------
Confidence 99999999999999999999997665 49999999997643211
Q ss_pred ceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhh-----------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKD----------------- 757 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~----------------- 757 (934)
+...||+.|+|||++.+ ..++.++|||||||++|+|++| .+||.... .... .+...
T Consensus 181 ---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 181 ---TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS-SCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred ---cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 01468999999999987 6789999999999999999996 66765432 2111 11110
Q ss_pred ------cc-------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 758 ------RK-------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 758 ------~~-------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. .......++++.+||.+||+.||++|||+.++++||||...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 00 00112457899999999999999999999999999999654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-40 Score=360.03 Aligned_cols=255 Identities=24% Similarity=0.402 Sum_probs=195.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
....+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. ++..++||||+++++++.+.+..|+||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS-IMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHH-HHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34567799999999999999999855 4589999999976543 45566665 788899999999999999999999999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|+|.+ +|.+++.. ....+++.+++.++.||+.||+|||++
T Consensus 104 e~~~~~~L~~~~~~---------------------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~ 144 (314)
T 3com_A 104 EYCGAGSVSDIIRL---------------------------------------RNKTLTEDEIATILQSTLKGLEYLHFM 144 (314)
T ss_dssp ECCTTEEHHHHHHH---------------------------------------HTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCHHHHHHh---------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 98765 55555421 124567889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++. +||+|||+++.+....... ....|
T Consensus 145 ~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~-----------------------------------~~~~~ 187 (314)
T 3com_A 145 RKIHRDIKAGNILLNTEGH--AKLADFGVAGQLTDTMAKR-----------------------------------NTVIG 187 (314)
T ss_dssp TEECCCCSGGGEEECTTCC--EEECCCTTCEECBTTBSCB-----------------------------------CCCCS
T ss_pred CCcCCCcCHHHEEECCCCC--EEEeecccchhhhhhcccc-----------------------------------CccCC
Confidence 9999999999999976654 9999999998765432111 11468
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccc--cccCCCHHHHHHHHHcccCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDL--FLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~--~~~~~~~e~~dLI~~~L~~D 781 (934)
|+.|+|||++.+..++.++|||||||++|+|++| .+||...... ....+... ... .+...++++.+||.+||+.|
T Consensus 188 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 266 (314)
T 3com_A 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG-KPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKS 266 (314)
T ss_dssp CGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSC
T ss_pred CCCccChhhcCCCCCCccccHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCC
Confidence 9999999999999999999999999999999996 6677654322 22222211 111 12335689999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCcc
Q 002343 782 PDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~~ 801 (934)
|.+|||+.++++||||....
T Consensus 267 p~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 267 PEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp TTTSCCHHHHTTSHHHHTCC
T ss_pred hhhCcCHHHHHhCHHHhcCC
Confidence 99999999999999997654
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-41 Score=380.45 Aligned_cols=248 Identities=15% Similarity=0.099 Sum_probs=175.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHH-HHH--HHHHHhCCCCceeEEE-------EEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVAL-KEI--QNLIASDQHPNIVRWY-------GVE 536 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~-~Ei--~~ll~~l~HpNIV~l~-------g~~ 536 (934)
..|.+.+.||+|+||+||++.. .+|+.||||++..... ...+ +|+ ..++.. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 4588999999999999999864 5789999999987542 1223 332 234555 899988866 444
Q ss_pred ecC-----------------CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhh
Q 002343 537 SDQ-----------------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWK 599 (934)
Q Consensus 537 ~~~-----------------~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (934)
... ..+|||||||+++|.+++...+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-------------------------------------- 182 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-------------------------------------- 182 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH--------------------------------------
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc--------------------------------------
Confidence 332 3489999988887777764311
Q ss_pred hCCCCHHHH------HHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcc
Q 002343 600 ANGHPSAQL------LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMD 673 (934)
Q Consensus 600 ~~~l~~~~i------~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~ 673 (934)
..+++..+ ..++.||+.||+|||++|||||||||+|||++.++. +||+|||+|+.......
T Consensus 183 -~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DFG~a~~~~~~~~---------- 249 (371)
T 3q60_A 183 -FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR--LMLGDVSALWKVGTRGP---------- 249 (371)
T ss_dssp -HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSC--EEECCGGGEEETTCEEE----------
T ss_pred -cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCC--EEEEecceeeecCCCcc----------
Confidence 01122223 567799999999999999999999999999976654 99999999986542110
Q ss_pred hhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhccc--CCCcccccccchhhhhHHhhcCCCCCCCCchhHH
Q 002343 674 LQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD 751 (934)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~ 751 (934)
...||+.|+|||++.+ ..++.++|||||||++|||++| .+||.......
T Consensus 250 ----------------------------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg-~~Pf~~~~~~~ 300 (371)
T 3q60_A 250 ----------------------------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL-FLPFGLVTPGI 300 (371)
T ss_dssp ----------------------------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS-SCSTTBCCTTC
T ss_pred ----------------------------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC-CCCCCCcCccc
Confidence 1347799999999987 6789999999999999999995 77776542211
Q ss_pred HHHH-------hhc-cc--ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 752 ANIV-------KDR-KD--LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 752 ~~i~-------~~~-~~--~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.... ... .. ......++++.+||.+||+.||++|||+.++|+||||....
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred ccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 1000 000 11 11135578999999999999999999999999999995433
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=362.99 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=192.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC--hhHHHHHHHHHHHhCCCCceeEEEEEEec------C
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESD------Q 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------~ 539 (934)
....+.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+..+....+||||+++++++.. .
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 34567799999999999999999865 478999999986543 34566777645444589999999999987 5
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+..|+|||||.+ +|.+++.. . +...+++..++.++.||+.|
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~-----------~---------------------------~~~~~~~~~~~~i~~qi~~~ 141 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKN-----------T---------------------------KGNTLKEEWIAYICREILRG 141 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHH-----------S---------------------------GGGCCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCcHHHHHHh-----------c---------------------------ccCCCCHHHHHHHHHHHHHH
Confidence 689999997764 55555421 1 12356788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++. +||+|||+++.+.......
T Consensus 142 l~~lH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~--------------------------------- 186 (326)
T 2x7f_A 142 LSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRTVGRR--------------------------------- 186 (326)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCTTTC------------------------------------------
T ss_pred HHHHHHCCccccCCcHHHEEEcCCCC--EEEeeCcCceecCcCcccc---------------------------------
Confidence 99999999999999999999976654 9999999998654321100
Q ss_pred eeecCCCCCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH-hhc-ccccccCCCHHH
Q 002343 699 FFTVGYGSSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV-KDR-KDLFLVEHIPEA 770 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~-~~~-~~~~~~~~~~e~ 770 (934)
....||+.|+|||++. +..++.++|||||||++|+|++| .+||..... .....+ ... ........++++
T Consensus 187 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 263 (326)
T 2x7f_A 187 --NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG-APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKF 263 (326)
T ss_dssp ------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHH
T ss_pred --ccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHhhcCccccCCccccCHHH
Confidence 1146899999999997 56689999999999999999996 666654332 222222 221 122234457899
Q ss_pred HHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 771 VDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 771 ~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.+||.+||..||.+|||+.++++||||++...
T Consensus 264 ~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 295 (326)
T 2x7f_A 264 QSFIESCLVKNHSQRPATEQLMKHPFIRDQPN 295 (326)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred HHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence 99999999999999999999999999976543
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=371.24 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=196.8
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~ 537 (934)
..+.|.+.+.||+|+||+||++... ++..||||++..... +...+|+. +++.+ +|||||++++++.
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHH-HHHHSCCCTTBCCEEEEEC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHH-HHHHhcCCCCEeeEEEEEc
Confidence 3467899999999999999998643 356799999976543 23456665 66667 8999999999999
Q ss_pred cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 538 ~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
+.+.+|+|||||.+ +|.+++ .......... ..+........+++.+++.++.||+
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l-----------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~i~~qi~ 213 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYL-----------RARRPPGMEY-------------SYDINRVPEEQMTFKDLVSCTYQLA 213 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHH-----------HHTCCC------------------------CCCCCCHHHHHHHHHHHH
T ss_pred cCCCEEEEEEcCCCCCHHHHH-----------HhhCCccccc-------------cccccccccccCCHHHHHHHHHHHH
Confidence 99999999997653 555544 3221100000 0000011234578899999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++|||||||||+|||++.++ .+||+|||+|+.+.........
T Consensus 214 ~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~~----------------------------- 262 (370)
T 2psq_A 214 RGMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKKT----------------------------- 262 (370)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCCSSCEETTCCCTTCTT-----------------------------
T ss_pred HHHHHHHhCCeeccccchhhEEECCCC--CEEEccccCCcccCcccceecc-----------------------------
Confidence 999999999999999999999997665 4999999999876543221110
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLF 774 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI 774 (934)
....||+.|+|||++.+..++.++|||||||++|||++++.+||.... ......+... ....+...++++.+||
T Consensus 263 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 338 (370)
T 2psq_A 263 ----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMM 338 (370)
T ss_dssp ----TTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred ----cCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 114588999999999999999999999999999999996678886543 3333333322 2333445678999999
Q ss_pred HHcccCCCCCCcCHHHHHcC
Q 002343 775 TRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~H 794 (934)
.+||+.||++|||+.|++++
T Consensus 339 ~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 339 RDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999864
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=370.95 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=195.6
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+....+.|.+.+.||+|+||+||++.. .+++.||+|++..... +...+|+. +++.++||||+++++++.+++..
T Consensus 28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ-VLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHG-GGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHH-HHHHCCCCCEEEEeEEEEECCEE
Confidence 345567899999999999999999855 4689999999976533 23445554 77888999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|+|||||.+ +|.+++ .. ...+++..+..++.||+.||+|
T Consensus 107 ~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~~i~~~l~~ 146 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVL-----------KK-----------------------------AGRIPEQILGKVSIAVIKGLTY 146 (360)
T ss_dssp EEEECCCTTCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHH-----------HH-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999997754 454443 21 2346788899999999999999
Q ss_pred HHHC-CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 622 LHEI-GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 622 LHs~-gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
||++ ||+||||||+|||++.++. +||+|||+++.+.....
T Consensus 147 lh~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~------------------------------------- 187 (360)
T 3eqc_A 147 LREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMA------------------------------------- 187 (360)
T ss_dssp HHHHHCCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHHHC--------------------------------------
T ss_pred HHHhCCEEcCCccHHHEEECCCCC--EEEEECCCCcccccccc-------------------------------------
Confidence 9996 9999999999999977664 99999999976532110
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHH--------------------------
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI-------------------------- 754 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i-------------------------- 754 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||..........
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG-RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHT-SCCSSCCCHHHHHHHHC-----------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 114699999999999999999999999999999999996 66665432221110
Q ss_pred ------------------Hhhccc-ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 755 ------------------VKDRKD-LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 755 ------------------~~~~~~-~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
...... ......++++.+||.+||+.||++|||++|+|+||||...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 111111 1112346789999999999999999999999999999543
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=354.24 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=193.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. ++..++||||+++++++.+.+..|+|||+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHH-HHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3467899999999999999999777888999999976532 34556665 88889999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.+++... ...+++.+++.++.||+.||+|||++||+
T Consensus 101 ~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 142 (283)
T 3gen_A 101 MA----------NGCLLNYLREM----------------------------RHRFQTQQLLEMCKDVCEAMEYLESKQFL 142 (283)
T ss_dssp CT----------TCBHHHHHHCG----------------------------GGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cC----------CCcHHHHHHHh----------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 65 33444433211 23467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++.......... ....||+.
T Consensus 143 H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~ 186 (283)
T 3gen_A 143 HRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSS----------------------------------VGSKFPVR 186 (283)
T ss_dssp CSSCSGGGEEECTTS--CEEECSTTGGGGBCCHHHHST----------------------------------TSTTSCGG
T ss_pred CCCCccceEEEcCCC--CEEEccccccccccccccccc----------------------------------cCCccCcc
Confidence 999999999997665 499999999987644221110 01347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|+|++++.+||...... ... +........+...++++.+||.+||+.||++||
T Consensus 187 y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 266 (283)
T 3gen_A 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERP 266 (283)
T ss_dssp GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred cCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCc
Confidence 999999999999999999999999999999568888654332 222 222223333445578999999999999999999
Q ss_pred CHHHHHcC
Q 002343 787 KAQNVLNH 794 (934)
Q Consensus 787 Ta~evL~H 794 (934)
|+.++++|
T Consensus 267 s~~~ll~~ 274 (283)
T 3gen_A 267 TFKILLSN 274 (283)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999976
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=366.94 Aligned_cols=260 Identities=28% Similarity=0.419 Sum_probs=197.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVE 536 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~ 536 (934)
..+.+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~ 84 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE-ILKKLNHPCIIKIKNFF 84 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHH-HHHHCCCTTBCCEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHH-HHHhCCCCCCceEeeEE
Confidence 34567899999999999999999854 4689999999865321 12345655 77889999999999999
Q ss_pred ecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHH
Q 002343 537 SDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (934)
Q Consensus 537 ~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qI 615 (934)
..++ .|+|||||.+ +|.+++ .. ...+++.+++.++.||
T Consensus 85 ~~~~-~~lv~e~~~~~~L~~~~-----------~~-----------------------------~~~~~~~~~~~~~~qi 123 (322)
T 2ycf_A 85 DAED-YYIVLELMEGGELFDKV-----------VG-----------------------------NKRLKEATCKLYFYQM 123 (322)
T ss_dssp ESSS-EEEEEECCTTEETHHHH-----------ST-----------------------------TCCCCHHHHHHHHHHH
T ss_pred cCCc-eEEEEecCCCCcHHHHH-----------hc-----------------------------cCCCCHHHHHHHHHHH
Confidence 8765 8999997764 454443 11 2356788899999999
Q ss_pred HHHHHHHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 616 VSGLSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 616 a~gL~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
+.||+|||++||+||||||+|||++.++ ...+||+|||+++........
T Consensus 124 ~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------ 173 (322)
T 2ycf_A 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM------------------------------ 173 (322)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHH------------------------------
T ss_pred HHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccccc------------------------------
Confidence 9999999999999999999999997543 345999999999876432110
Q ss_pred cccceeecCCCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc-ccc---cccC
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR-KDL---FLVE 765 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~-~~~---~~~~ 765 (934)
....||+.|+|||++. ...++.++|||||||++|+|++| .+||..... .....+... ... ....
T Consensus 174 ------~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (322)
T 2ycf_A 174 ------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG-YPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 246 (322)
T ss_dssp ------HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHS-SCSSCSTTCSSCHHHHHHHTCCCCCHHHHTT
T ss_pred ------ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhC-CCCCcccchHHHHHHHHHhCccccCchhhhh
Confidence 0135899999999974 46789999999999999999996 677754321 112222221 111 1234
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccchhhhh
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFL 807 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~~~~fl 807 (934)
.++++.+||.+||+.||++|||+.++++||||...+.+..+.
T Consensus 247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~~~~~~ 288 (322)
T 2ycf_A 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 288 (322)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHHHHHHH
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHHHHHHH
Confidence 578999999999999999999999999999998876654443
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=368.68 Aligned_cols=256 Identities=27% Similarity=0.389 Sum_probs=181.0
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+..+++.++||||+++++++.+.+..|+||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35688889999999999999865 4689999999976532 234566666778899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI- 625 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~- 625 (934)
|+|.++|.+++... . ......+++..+..++.|++.||+|||++
T Consensus 101 e~~~~~l~~~~~~~--------~---------------------------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 145 (327)
T 3aln_A 101 ELMSTSFDKFYKYV--------Y---------------------------SVLDDVIPEEILGKITLATVKALNHLKENL 145 (327)
T ss_dssp CCCSEEHHHHHHHH--------H---------------------------HTTCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCChHHHHHHH--------H---------------------------hhhcccCcHHHHHHHHHHHHHHHHHHhccC
Confidence 99998877665210 0 00134578889999999999999999998
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++.+...... ....|
T Consensus 146 ~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~------------------------------------~~~~g 187 (327)
T 3aln_A 146 KIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVDSIAK------------------------------------TRDAG 187 (327)
T ss_dssp SCCCSCCCGGGEEEETTT--EEEECCCSSSCC------------------------------------------------
T ss_pred CEeECCCCHHHEEEcCCC--CEEEccCCCceeccccccc------------------------------------ccCCC
Confidence 999999999999997665 5999999999876432110 11358
Q ss_pred CCccccchhc----ccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHH---Hhhccccc----ccCCCHHHHHHH
Q 002343 706 SSGWQAPEQL----LQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI---VKDRKDLF----LVEHIPEAVDLF 774 (934)
Q Consensus 706 T~~Y~APE~l----~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i---~~~~~~~~----~~~~~~e~~dLI 774 (934)
|+.|+|||++ .+..++.++|||||||++|+|++| ..||.......... ........ ....++++.+||
T Consensus 188 t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 266 (327)
T 3aln_A 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG-RFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFV 266 (327)
T ss_dssp ------------------CCSHHHHHHHHHHHHHHHHS-CCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHH
T ss_pred CccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHC-CCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHH
Confidence 9999999998 456789999999999999999996 67776532211111 11111111 124578999999
Q ss_pred HHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
.+||+.||++|||+.++++||||...+
T Consensus 267 ~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 267 NLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp HHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred HHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 999999999999999999999996543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=364.14 Aligned_cols=250 Identities=24% Similarity=0.336 Sum_probs=192.5
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
...+.|.+.+.||+|+||+||++... .+..||||++..... +...+|+. +++.++||||+++++++.+.+.
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS-IMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECGGGC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEeCCc
Confidence 34577999999999999999998653 355699999975433 23445655 7888999999999999999999
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++ ... ...+++.+++.++.||+.||+
T Consensus 125 ~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~~L~ 165 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFL-----------RTH----------------------------DGQFTIMQLVGMLRGVGAGMR 165 (325)
T ss_dssp CEEEEECCTTCBHHHHH-----------HTT----------------------------TTCSCHHHHHHHHHHHHHHHH
T ss_pred cEEEeeCCCCCcHHHHH-----------Hhc----------------------------ccCCCHHHHHHHHHHHHHHHH
Confidence 9999997653 444443 211 234678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++.+......... .
T Consensus 166 ~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~--------------------------------~ 211 (325)
T 3kul_A 166 YLSDLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDPDAAYT--------------------------------T 211 (325)
T ss_dssp HHHHTTEECSCCSGGGEEECTTC--CEEECCCSSCEECC----CCEE--------------------------------C
T ss_pred HHHHCCeeCCCCCcceEEECCCC--CEEECCCCcccccccCccceee--------------------------------c
Confidence 99999999999999999996655 5999999999877553221111 0
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHh-hcccccccCCCHHHHHHHHHcc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~-~~~~~~~~~~~~e~~dLI~~~L 778 (934)
....||+.|+|||++.+..++.++|||||||++|||++++.+||...... ....+. ......+...++++.+||.+||
T Consensus 212 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 291 (325)
T 3kul_A 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCW 291 (325)
T ss_dssp C---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred cCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHc
Confidence 11457889999999999999999999999999999999557777654333 222222 2233334556789999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
..||++|||+.++++
T Consensus 292 ~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 292 HKDRAQRPRFSQIVS 306 (325)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred cCChhhCcCHHHHHH
Confidence 999999999999985
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=368.08 Aligned_cols=254 Identities=23% Similarity=0.351 Sum_probs=189.5
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCC-
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQD- 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~- 540 (934)
..+.++|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ-NAAALNHPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHT-TCCCCCCTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHH-HHHcCCCCCcceEEEeeeccCC
Confidence 45677899999999999999999854 6789999999975432 12334444 677889999999999987654
Q ss_pred ---eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 541 ---~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
..|+|||||++ +|.+++ .. ...+++.+++.++.||+
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l-----------~~-----------------------------~~~~~~~~~~~~~~qi~ 126 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIV-----------HT-----------------------------EGPMTPKRAIEVIADAC 126 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHH
T ss_pred CCcccEEEEecCCCCCHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHH
Confidence 45999997753 555444 21 23567888999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++. +||+|||+++.+..........
T Consensus 127 ~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~---------------------------- 176 (311)
T 3ork_A 127 QALNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQT---------------------------- 176 (311)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEEETTSC--EEECCCSCC-----------------------------------------
T ss_pred HHHHHHHHCCCCcCCCCHHHEEEcCCCC--EEEeeccCcccccccccccccc----------------------------
Confidence 9999999999999999999999987765 9999999998765432211110
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcccc---cccCCCHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDL---FLVEHIPEAV 771 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~~---~~~~~~~e~~ 771 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||........ ......... .....++++.
T Consensus 177 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 251 (311)
T 3ork_A 177 ----AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG-EPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 251 (311)
T ss_dssp ---------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHH
T ss_pred ----cccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHH
Confidence 114699999999999999999999999999999999996 677765433222 222221111 1234678999
Q ss_pred HHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
+||.+||+.||++||++.+++.|+|+.
T Consensus 252 ~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 252 AVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 999999999999999999999999984
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=363.14 Aligned_cols=252 Identities=23% Similarity=0.420 Sum_probs=191.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCC--e
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--F 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--~ 541 (934)
...+++|.+.+.||+|+||+||++... +|+.||||++.... .+...+|+. +++.++||||+++++++.+.+ .
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECTTTCC
T ss_pred cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH-HHHhcCCCCcceEEEEeecCCCce
Confidence 345688999999999999999998554 58999999997532 234556665 788899999999999988755 8
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++ .... ....+++.+++.++.||+.||+
T Consensus 84 ~~lv~e~~~~~~L~~~l-----------~~~~--------------------------~~~~~~~~~~~~i~~qi~~~L~ 126 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVL-----------EEPS--------------------------NAYGLPESEFLIVLRDVVGGMN 126 (319)
T ss_dssp EEEEEECCTTCBHHHHH-----------HSGG--------------------------GTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHH-----------HHhc--------------------------cccCCCHHHHHHHHHHHHHHHH
Confidence 8999997753 444444 2210 1234788999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEe--cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 621 HLHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~--~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|||++||+||||||+|||+. .++...+||+|||+|+.+......
T Consensus 127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~---------------------------------- 172 (319)
T 4euu_A 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---------------------------------- 172 (319)
T ss_dssp HHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB----------------------------------
T ss_pred HHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce----------------------------------
Confidence 99999999999999999983 233456999999999876543221
Q ss_pred eeecCCCCCccccchhcc--------cCCCcccccccchhhhhHHhhcCCCCCCCCc------hhHHHHHHhhcccc---
Q 002343 699 FFTVGYGSSGWQAPEQLL--------QGRQTRAIDLFSLGCILFFCITGGKHPYGES------FERDANIVKDRKDL--- 761 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~--------~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~------~~~~~~i~~~~~~~--- 761 (934)
...+||+.|+|||++. +..++.++|||||||++|||++| .+||... ......+....+..
T Consensus 173 --~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 173 --VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG-SLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp --CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS-SCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred --eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 1146999999999986 56789999999999999999996 6677421 11122222222110
Q ss_pred ---------------cc------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 762 ---------------FL------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 762 ---------------~~------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
.+ ....+.+.+||.+||+.||++|||++|+|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 00 11134788999999999999999999999998
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=362.52 Aligned_cols=264 Identities=21% Similarity=0.280 Sum_probs=182.1
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEec-C---cEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYE-G---RSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~-g---~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
....++|.+.+.||+|+||+||++.... + ..||||++.... .+...+|+. +++.++||||+++++++.+.
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAA-CMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHH-HHTTCCCTTBCCCCEEEECC
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHH-HHHHCCCCceehhhceeecc
Confidence 3455779999999999999999985443 3 389999986542 133455665 77888999999999999887
Q ss_pred CeE------EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 540 DFV------YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 540 ~~~------yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
+.. |+|||||.+ |+|.+++....... ....+++.+++.++.
T Consensus 98 ~~~~~~~~~~~v~e~~~~----------~~L~~~l~~~~~~~-----------------------~~~~~~~~~~~~i~~ 144 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKH----------GDLHAFLLASRIGE-----------------------NPFNLPLQTLVRFMV 144 (323)
T ss_dssp -------CEEEEEECCTT----------CBHHHHHHHHHC--------------------------CCCCCHHHHHHHHH
T ss_pred ccccCCCccEEEEEeccC----------CcHHHHHHhhhccc-----------------------cccccCHHHHHHHHH
Confidence 665 999996654 44444433211000 123578899999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...........
T Consensus 145 qi~~al~~LH~~~ivH~Dikp~NIli~~~~--~~kl~Dfg~a~~~~~~~~~~~~-------------------------- 196 (323)
T 3qup_A 145 DIACGMEYLSSRNFIHRDLAARNCMLAEDM--TVCVADFGLSRKIYSGDYYRQG-------------------------- 196 (323)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEEECCCCC---------------------------------------
T ss_pred HHHHHHHHHHcCCcccCCCCcceEEEcCCC--CEEEeecccccccccccccccc--------------------------
Confidence 999999999999999999999999997665 4999999999876543221110
Q ss_pred ccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHH
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAV 771 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~ 771 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||...... .. .+........+...++++.
T Consensus 197 -------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (323)
T 3qup_A 197 -------CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVY 269 (323)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred -------ccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHH
Confidence 11347889999999999999999999999999999999668888654332 22 2333333444556778999
Q ss_pred HHHHHcccCCCCCCcC-------HHHHHcCCCCCCcc
Q 002343 772 DLFTRLLDPNPDLRPK-------AQNVLNHPFFWTAD 801 (934)
Q Consensus 772 dLI~~~L~~DP~~RPT-------a~evL~HPff~~~~ 801 (934)
+||.+||+.||++||| ++++++|||+....
T Consensus 270 ~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 270 DLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999999 67788999996644
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=358.11 Aligned_cols=255 Identities=26% Similarity=0.370 Sum_probs=194.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
...+.|.+.+.||+|+||+||++... +++.||+|++.... .+...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-ILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHH-HHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHH-HHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 35577999999999999999998654 58999999986443 234556665 77888999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|++ +|.+++ .. ....+++.+++.++.||+.||+|||+
T Consensus 95 ~e~~~~~~l~~~~-----------~~----------------------------~~~~~~~~~~~~~~~~i~~~l~~lH~ 135 (302)
T 2j7t_A 95 IEFCPGGAVDAIM-----------LE----------------------------LDRGLTEPQIQVVCRQMLEALNFLHS 135 (302)
T ss_dssp EECCTTEEHHHHH-----------HH----------------------------HTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHH-----------Hh----------------------------hccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 997764 444433 21 13457888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++. +||+|||++......... .....
T Consensus 136 ~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~-----------------------------------~~~~~ 178 (302)
T 2j7t_A 136 KRIIHRDLKAGNVLMTLEGD--IRLADFGVSAKNLKTLQK-----------------------------------RDSFI 178 (302)
T ss_dssp TTCCCCCCSGGGEEECTTSC--EEECCCHHHHHHHHHHHC----------------------------------------
T ss_pred CCcccCCCCHHHEEECCCCC--EEEEECCCCccccccccc-----------------------------------ccccc
Confidence 99999999999999976654 999999998643211000 01146
Q ss_pred CCCccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhccc--ccccCCCHHHHHHHH
Q 002343 705 GSSGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKD--LFLVEHIPEAVDLFT 775 (934)
Q Consensus 705 GT~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~--~~~~~~~~e~~dLI~ 775 (934)
||+.|+|||++. +..++.++|||||||++|+|++| .+||...... . ..+...... ..+...+.++.+||.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 257 (302)
T 2j7t_A 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLK 257 (302)
T ss_dssp CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred CChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcC-CCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHH
Confidence 899999999984 56789999999999999999996 6677654322 2 222222221 123445789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
+||+.||++|||+.++++||||.....
T Consensus 258 ~~l~~dp~~Rps~~~ll~h~~~~~~~~ 284 (302)
T 2j7t_A 258 IALDKNPETRPSAAQLLEHPFVSSITS 284 (302)
T ss_dssp HHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred HHcccChhhCCCHHHHhcChHHhhhcc
Confidence 999999999999999999999976554
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=374.25 Aligned_cols=261 Identities=23% Similarity=0.275 Sum_probs=199.9
Q ss_pred eecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.++|||||++++++.+.
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSS
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHH-HHHhCCCCCCCeEEEEEecC
Confidence 3456789999999999999999753 3577899999965432 23455665 78888999999999999999
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+..|+|||||.+ +|.+++ ....... .....+++.+++.++.||+.|
T Consensus 147 ~~~~lv~e~~~~g~L~~~l-----------~~~~~~~----------------------~~~~~~~~~~~~~i~~qi~~a 193 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFL-----------RETRPRP----------------------SQPSSLAMLDLLHVARDIACG 193 (367)
T ss_dssp SSCEEEEECCTTEEHHHHH-----------HHHSCCS----------------------SSCCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHH-----------Hhhcccc----------------------CccccccHHHHHHHHHHHHHH
Confidence 999999997753 555544 3211100 012357888999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
|+|||++||+||||||+|||++.++ ...+||+|||+|+.+.........
T Consensus 194 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~------------------------------ 243 (367)
T 3l9p_A 194 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG------------------------------ 243 (367)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTC------------------------------
T ss_pred HHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccC------------------------------
Confidence 9999999999999999999997443 345999999999865432211100
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHh-hcccccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVK-DRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~-~~~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|||++++.+||....... ...+. ......+...++++.+||.
T Consensus 244 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 320 (367)
T 3l9p_A 244 ---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMT 320 (367)
T ss_dssp ---CGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ---CCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 114589999999999999999999999999999999996688887654332 23232 2223334556789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff 797 (934)
+||+.||++|||+.++++|.++
T Consensus 321 ~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 321 QCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHH
Confidence 9999999999999999998765
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-40 Score=366.14 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=201.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--------------------hHHHHHHHHHHHhCCCCc
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--------------------DVALKEIQNLIASDQHPN 528 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--------------------~~~~~Ei~~ll~~l~HpN 528 (934)
....+.|.+.+.||+|+||+||++.. +|+.||||++..... +...+|+. +++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ-IITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHH-HHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHH-HHHhCCCCC
Confidence 34556899999999999999999877 999999999864321 44556665 788899999
Q ss_pred eeEEEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHH
Q 002343 529 IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQ 607 (934)
Q Consensus 529 IV~l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 607 (934)
|+++++++.+.+..|+|||+|++ +|.+++..... +.. .....+++..
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----l~~---------------------------~~~~~~~~~~ 152 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV-----LDK---------------------------NYTCFIPIQV 152 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEES-----SCS---------------------------SSCCCCCHHH
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhh-----hhh---------------------------ccccCCCHHH
Confidence 99999999999999999998875 77666310000 000 0134578899
Q ss_pred HHHHHHHHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhh
Q 002343 608 LLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKL 686 (934)
Q Consensus 608 i~~i~~qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (934)
++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.......
T Consensus 153 ~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~----------------------- 207 (348)
T 2pml_X 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDKKI----------------------- 207 (348)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTS--CEEECCCTTCEECBTTEE-----------------------
T ss_pred HHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCC--cEEEeccccccccccccc-----------------------
Confidence 99999999999999999 9999999999999997665 499999999987644310
Q ss_pred hhhccccccccceeecCCCCCccccchhcccC-CCcc-cccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhccccc
Q 002343 687 VICECVFQFGVLFFTVGYGSSGWQAPEQLLQG-RQTR-AIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKDLF 762 (934)
Q Consensus 687 ~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~-~~t~-ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~~~~~ 762 (934)
....||+.|+|||++.+. .++. ++|||||||++|+|++| .+||.... ......+.......
T Consensus 208 --------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~i~~~~~~~ 272 (348)
T 2pml_X 208 --------------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN-VVPFSLKISLVELFNNIRTKNIEY 272 (348)
T ss_dssp --------------CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHS-SCSSCCSSCSHHHHHHHTSCCCCC
T ss_pred --------------cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHhccCcCC
Confidence 114689999999999887 6666 99999999999999996 66775432 22222332222222
Q ss_pred c-------------------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 763 L-------------------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 763 ~-------------------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
+ ...++++.+||.+||+.||.+|||+.|+++||||.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN 330 (348)
T ss_dssp CCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence 2 34578999999999999999999999999999997654
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=357.21 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=192.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe-cC-------cEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY-EG-------RSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~-~g-------~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
..+.|.+.+.||+|+||+||++... ++ +.||+|++..... +...+|+. +++.++||||+++++++.++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS-MMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHH-HHHTSCCTTBCCEEEEECCT
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHH-HHHhCCCCCEeEEEEEEEeC
Confidence 3467899999999999999998443 33 5799999865432 33445554 88899999999999999999
Q ss_pred CeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+..|+|||||. ++|.+++ ... ...+++.+++.++.||+.|
T Consensus 85 ~~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~~ 125 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYL-----------KKN----------------------------KNCINILWKLEVAKQLAAA 125 (289)
T ss_dssp TCCEEEEECCTTCBHHHHH-----------HHT----------------------------GGGCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH-----------HhC----------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99999999776 3555544 211 1236778899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCc------eEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSF------CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECV 692 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~------~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (934)
|+|||++||+||||||+|||++.++.. .+||+|||+++......
T Consensus 126 L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 175 (289)
T 4fvq_A 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------------------------------ 175 (289)
T ss_dssp HHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH------------------------------
T ss_pred HHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCcc------------------------------
Confidence 999999999999999999999876531 28999999987543211
Q ss_pred cccccceeecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHH
Q 002343 693 FQFGVLFFTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771 (934)
Q Consensus 693 ~~~g~~~~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~ 771 (934)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.+|+..................+...++++.
T Consensus 176 ---------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (289)
T 4fvq_A 176 ---------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELA 246 (289)
T ss_dssp ---------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTH
T ss_pred ---------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHH
Confidence 0247889999999987 678999999999999999999888888765444333332233333444567899
Q ss_pred HHHHHcccCCCCCCcCHHHHHcC
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+||.+||+.||++|||+.++++|
T Consensus 247 ~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 247 NLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999999975
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=357.52 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=185.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.....|.+.+.||+|+||+||++. .+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVA-IMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEE-ETTEEEEEEEECCCCCSHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEE-ECCCcEEEEEecCCCCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEECCceEE
Confidence 345678999999999999999974 4789999999865432 23445665 7888999999999999999999999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||.+ +|.+++ .... ....+++.+++.++.||+.||+|||
T Consensus 112 v~e~~~~~~L~~~l-----------~~~~--------------------------~~~~~~~~~~~~i~~qi~~aL~~LH 154 (309)
T 3p86_A 112 VTEYLSRGSLYRLL-----------HKSG--------------------------AREQLDERRRLSMAYDVAKGMNYLH 154 (309)
T ss_dssp EEECCTTCBHHHHH-----------HSTT--------------------------HHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcHHHHH-----------hhcC--------------------------CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9997653 444443 2210 0112578889999999999999999
Q ss_pred HCC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 624 EIG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 624 s~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
++| |+||||||+|||++.++ .+||+|||+|+........ ..
T Consensus 155 ~~~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~-----------------------------------~~ 197 (309)
T 3p86_A 155 NRNPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKASTFLS-----------------------------------SK 197 (309)
T ss_dssp TSSSCCCCTTCCGGGEEECTTC--CEEECCCC------------------------------------------------
T ss_pred cCCCCEECCCCChhhEEEeCCC--cEEECCCCCCccccccccc-----------------------------------cc
Confidence 999 99999999999997665 4999999999754332110 01
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH--hhcccccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV--KDRKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~--~~~~~~~~~~~~~e~~dLI~~~L 778 (934)
...||+.|+|||++.+..++.++|||||||++|+|++| .+||....... ...+ .......+...++++.+||.+||
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 276 (309)
T 3p86_A 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCW 276 (309)
T ss_dssp ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHC-CCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHT
T ss_pred cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence 14699999999999999999999999999999999996 67776543332 2222 12222334456789999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
+.||++|||+.++++
T Consensus 277 ~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 277 TNEPWKRPSFATIMD 291 (309)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred cCChhhCcCHHHHHH
Confidence 999999999999986
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=356.07 Aligned_cols=252 Identities=22% Similarity=0.347 Sum_probs=190.4
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..++||||+++++++.+++
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH-NSSQLSHQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHH-HHTTCCBTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHH-HHhcCCCCCCceEEEeeeeCC
Confidence 466788899999999999999999854 5689999999854321 23345554 778899999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|+|||||.+ |+|.+++.. ...+++.+++.++.||+.||+
T Consensus 85 ~~~lv~e~~~g----------~~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~~l~ 125 (294)
T 4eqm_A 85 CYYLVMEYIEG----------PTLSEYIES-----------------------------HGPLSVDTAINFTNQILDGIK 125 (294)
T ss_dssp EEEEEEECCCS----------CBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCC----------CCHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHHHH
Confidence 99999997754 344333321 245788899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++. +||+|||+|+.+........
T Consensus 126 ~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~---------------------------------- 169 (294)
T 4eqm_A 126 HAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLTQT---------------------------------- 169 (294)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSC--EEECCCSSSTTC------------------------------------------
T ss_pred HHHHCCcccCCCCHHHEEECCCCC--EEEEeCCCcccccccccccc----------------------------------
Confidence 999999999999999999976654 99999999987643221110
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH--HHHhhcccc----cccCCCHHHHHHH
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDL----FLVEHIPEAVDLF 774 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~--~i~~~~~~~----~~~~~~~e~~dLI 774 (934)
...+||+.|+|||++.+..++.++|||||||++|+|++| .+||........ ..+...... .....++++.++|
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 248 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG-EPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI 248 (294)
T ss_dssp -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHS-SCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHH
T ss_pred CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHH
Confidence 114699999999999999999999999999999999996 777765433222 222222111 1234568999999
Q ss_pred HHcccCCCCCCcCHHHHHcCCC
Q 002343 775 TRLLDPNPDLRPKAQNVLNHPF 796 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~HPf 796 (934)
.+||+.||++||+..+.+.+.|
T Consensus 249 ~~~l~~dp~~R~~~~~~l~~~l 270 (294)
T 4eqm_A 249 LRATEKDKANRYKTIQEMKDDL 270 (294)
T ss_dssp HHHSCSSGGGSCSSHHHHHHHH
T ss_pred HHHhcCCHhHccccHHHHHHHH
Confidence 9999999999996555555554
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=357.01 Aligned_cols=255 Identities=23% Similarity=0.379 Sum_probs=192.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCC--CCceeEEEEEEecCCe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQ--HPNIVRWYGVESDQDF 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~--HpNIV~l~g~~~~~~~ 541 (934)
...++.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. ++..++ ||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHH-HHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHH-HHHhccccCCceEEEEEEeecCCE
Confidence 345678999999999999999998777899999999865432 23455665 555554 6999999999999999
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||++.++|.+++.. ...+++.+++.++.||+.||+|
T Consensus 103 ~~lv~e~~~~~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~aL~~ 142 (313)
T 3cek_A 103 IYMVMECGNIDLNSWLKK----------------------------------------KKSIDPWERKSYWKNMLEAVHT 142 (313)
T ss_dssp EEEEECCCSEEHHHHHHH----------------------------------------CSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCcHHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999666677666521 2346778899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++. + .+||+|||+++.+........ ..
T Consensus 143 LH~~~ivH~dlkp~NIl~~~-~--~~kL~Dfg~~~~~~~~~~~~~---------------------------------~~ 186 (313)
T 3cek_A 143 IHQHGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPDTTSVV---------------------------------KD 186 (313)
T ss_dssp HHHTTCCCCCCCGGGEEEET-T--EEEECCCSSSCC--------------------------------------------
T ss_pred HHHCCceecCCCcccEEEEC-C--eEEEeeccccccccCcccccc---------------------------------cc
Confidence 99999999999999999953 3 599999999987654322110 01
Q ss_pred cCCCCCccccchhccc-----------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH---HHHHhhcc-cccccCC
Q 002343 702 VGYGSSGWQAPEQLLQ-----------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD---ANIVKDRK-DLFLVEH 766 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~-----------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~---~~i~~~~~-~~~~~~~ 766 (934)
...||+.|+|||++.+ ..++.++|||||||++|+|++| ..||....... ..+..... ...+...
T Consensus 187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (313)
T 3cek_A 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-KTPFQQIINQISKLHAIIDPNHEIEFPDIP 265 (313)
T ss_dssp ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHS-SCTTTTCCSHHHHHHHHHCTTSCCCCCCCS
T ss_pred CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHhcccccCCcccc
Confidence 1469999999999875 4688999999999999999996 67776543222 22222211 1223344
Q ss_pred CHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 767 ~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
++++.+||.+||+.||++||++.++++||||....
T Consensus 266 ~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred hHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 67899999999999999999999999999996543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=366.36 Aligned_cols=290 Identities=21% Similarity=0.292 Sum_probs=197.4
Q ss_pred eecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+..+....+|||||++++++.+.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 4457799999999999999999853 3468999999976433 23567776444444899999999998875
Q ss_pred C-eEEEEEecccC-ChhhhHHhhcCCHH------HHHhh-hhccchhHHHHHHhhcc-------------------cccc
Q 002343 540 D-FVYLSLERCTC-SLNDLIYVLSGSFE------EQLNA-KEQDSNLLNEVRIRLLP-------------------VMEN 591 (934)
Q Consensus 540 ~-~~yLVmE~c~~-sL~dli~~~~GsL~------~~L~~-~~~~~~~~~~~~~~~~~-------------------~~~~ 591 (934)
+ ..|+|||||.+ +|.+++....+... ..+.. ..........+..++.. ....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 4 59999998874 67766644322100 00000 00000000000000000 0000
Q ss_pred hhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCC
Q 002343 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATG 671 (934)
Q Consensus 592 ~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~ 671 (934)
...........+++.+++.++.||+.||+|||++|||||||||+|||++.++ .+||+|||+|+.+.........
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~---- 252 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRK---- 252 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTSCTTCEEC----
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--cEEEEeccceeeecccccchhc----
Confidence 0000001123488999999999999999999999999999999999997655 4999999999876543221111
Q ss_pred cchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--h
Q 002343 672 MDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--E 749 (934)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~ 749 (934)
....||+.|+|||++.+..++.++|||||||++|||++++.+||.... .
T Consensus 253 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 303 (359)
T 3vhe_A 253 -----------------------------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303 (359)
T ss_dssp -------------------------------CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred -----------------------------cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH
Confidence 114589999999999999999999999999999999995577876532 2
Q ss_pred HHHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 750 RDANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 750 ~~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
.....+. ......+...++++.+||.+||+.||.+|||+.++++|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 304 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 2222222 22333344567899999999999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=358.71 Aligned_cols=266 Identities=26% Similarity=0.341 Sum_probs=181.5
Q ss_pred ecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+.|.+.+.||+|+||+||++. ..+++.||||++..... +...+|+. ++..++||||+++++++.+.+..|+|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQ-AMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHH-HHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34678889999999999999985 45789999999864432 23345554 66778999999999999999999999
Q ss_pred Eeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|. ++|.+++. ...... ......+++.+++.++.||+.||+|||+
T Consensus 92 ~e~~~~~~L~~~l~-----------~~~~~~---------------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 139 (303)
T 2vwi_A 92 MKLLSGGSVLDIIK-----------HIVAKG---------------------EHKSGVLDESTIATILREVLEGLEYLHK 139 (303)
T ss_dssp EECCTTCBHHHHHH-----------HHHHTT---------------------TTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhccCCchHHHHH-----------HHhhcc---------------------ccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99775 35555542 110000 0013457889999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++. +||+|||+++.+.......... ......
T Consensus 140 ~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~------------------------------~~~~~~ 187 (303)
T 2vwi_A 140 NGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDITRNK------------------------------VRKTFV 187 (303)
T ss_dssp TTCCCCCCSGGGEEECTTCC--EEECCCHHHHHCC---------------------------------------------
T ss_pred CCCCCCCCChhhEEEcCCCC--EEEEeccchheeccCCCccchh------------------------------hhcccC
Confidence 99999999999999976654 9999999998765432111000 001246
Q ss_pred CCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccc---------cccCCCHHHHH
Q 002343 705 GSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDL---------FLVEHIPEAVD 772 (934)
Q Consensus 705 GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~---------~~~~~~~e~~d 772 (934)
||+.|+|||++.+ ..++.++|||||||++|+|++| .+||....... . ......... .....++++.+
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T 2vwi_A 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266 (303)
T ss_dssp CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHS-SCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHH
T ss_pred CCccccCHHHhccccCCCchhhHHHHHHHHHHHHhC-CCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHH
Confidence 9999999999976 5689999999999999999996 66775533222 1 122211111 11345678999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||.+||+.||.+|||+.++++||||.....
T Consensus 267 li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 267 MISLCLQKDPEKRPTAAELLRHKFFQKAKN 296 (303)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred HHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence 999999999999999999999999976443
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=369.29 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=190.5
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhC-----------CCCceeEEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASD-----------QHPNIVRWYGVES 537 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l-----------~HpNIV~l~g~~~ 537 (934)
.++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..+ .||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHH-HHHHhhcccccchhccccchHHHHHHHhh
Confidence 46799999999999999999854 6789999999975432 33455555 33433 3899999999988
Q ss_pred cCC----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 538 DQD----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 538 ~~~----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
..+ ..++|||+|.++|.+++... ...++++.+++.++.
T Consensus 97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~--------------------------------------~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVLGENLLALIKKY--------------------------------------EHRGIPLIYVKQISK 138 (373)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHT--------------------------------------TTSCCCHHHHHHHHH
T ss_pred ccCCCCceEEEEEecCCCCHHHHHHHh--------------------------------------hccCCcHHHHHHHHH
Confidence 654 89999998877777665210 124478889999999
Q ss_pred HHHHHHHHHHHC-CCcccCCCCCeEEEecC----CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhh
Q 002343 614 DIVSGLSHLHEI-GLIHRDLKPQNVLISKD----KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688 (934)
Q Consensus 614 qIa~gL~yLHs~-gIVHRDLKP~NILl~~d----~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (934)
||+.||+|||++ |||||||||+|||++.+ ....+||+|||+|+.......
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------- 193 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT------------------------- 193 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC-------------------------
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCC-------------------------
Confidence 999999999998 99999999999999642 234699999999987643211
Q ss_pred hccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--------hHHHHHHhhcc-
Q 002343 689 CECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--------ERDANIVKDRK- 759 (934)
Q Consensus 689 ~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--------~~~~~i~~~~~- 759 (934)
...||+.|+|||++.+..++.++|||||||++|||++| .+||.... .....+.....
T Consensus 194 -------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 259 (373)
T 1q8y_A 194 -------------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG-DFLFEPDEGHSYTKDDDHIAQIIELLGE 259 (373)
T ss_dssp -------------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHS-SCCC---------CHHHHHHHHHHHHCS
T ss_pred -------------CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhC-CCCCCCCcccccCChHHHHHHHHHhcCC
Confidence 14689999999999999999999999999999999996 67775322 11111111000
Q ss_pred ----------------------------------------cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 760 ----------------------------------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 760 ----------------------------------------~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
.......++++.+||.+||+.||++|||++|+|+||||.+
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 339 (373)
T 1q8y_A 260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339 (373)
T ss_dssp CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence 0011122457889999999999999999999999999976
Q ss_pred c
Q 002343 800 A 800 (934)
Q Consensus 800 ~ 800 (934)
.
T Consensus 340 ~ 340 (373)
T 1q8y_A 340 T 340 (373)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=351.46 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=196.4
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+.++|.+.+.||+|+||+||++.. .+++.||||++.... .+...+|+. +++.++||||+++++++.+.+..
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHH-HHHhccCCCccEEEEEEeCCCeE
Confidence 34567899999999999999999855 478999999986432 234556665 77889999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|+|||+|.+ +|.+++ .. ...+++.+++.++.||+.||+|
T Consensus 97 ~lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~ 136 (287)
T 2wei_A 97 YIVGELYTGGELFDEI-----------IK-----------------------------RKRFSEHDAARIIKQVFSGITY 136 (287)
T ss_dssp EEEECCCCSCBHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 999997753 444433 21 2356788999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
||++||+||||||+|||++.++ ...+||+|||+++.........
T Consensus 137 LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------- 181 (287)
T 2wei_A 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----------------------------------- 181 (287)
T ss_dssp HHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCS-----------------------------------
T ss_pred HHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccc-----------------------------------
Confidence 9999999999999999997543 3469999999998764432110
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcc-cc---cccCCCHHHHHHHH
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRK-DL---FLVEHIPEAVDLFT 775 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~-~~---~~~~~~~e~~dLI~ 775 (934)
...||+.|+|||++.+ .++.++|||||||++|+|++| .+||... .......+.... .. .....++++.+||.
T Consensus 182 -~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 258 (287)
T 2wei_A 182 -DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG-TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258 (287)
T ss_dssp -CHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHH
T ss_pred -cccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHH
Confidence 1347889999999875 589999999999999999996 5566543 332222222221 11 12345789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
+||+.||++|||+.++++||||..
T Consensus 259 ~~l~~dp~~Rps~~ell~hp~~~~ 282 (287)
T 2wei_A 259 KMLTFHPSLRITATQCLEHPWIQK 282 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred HHcccChhhCcCHHHHhcCHHHhc
Confidence 999999999999999999999943
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=351.35 Aligned_cols=247 Identities=29% Similarity=0.405 Sum_probs=188.2
Q ss_pred eeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc-CCh
Q 002343 479 KEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSL 553 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~-~sL 553 (934)
..||+|+||+||++.. .+++.||||.+..... +...+|+ .+++.++||||+++++++.+.+..|+|||+|. ++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI-ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHH-HHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHH-HHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 4799999999999854 5688999999875432 2344555 48889999999999999999999999999775 355
Q ss_pred hhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 002343 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLK 633 (934)
Q Consensus 554 ~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLK 633 (934)
.+++.... ....+++..++.++.||+.||+|||++||+|||||
T Consensus 107 ~~~l~~~~-------------------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 149 (295)
T 2clq_A 107 SALLRSKW-------------------------------------GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149 (295)
T ss_dssp HHHHHHTT-------------------------------------CCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred HHHHHhhc-------------------------------------cCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCC
Confidence 55442110 01234577888999999999999999999999999
Q ss_pred CCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccc
Q 002343 634 PQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712 (934)
Q Consensus 634 P~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~AP 712 (934)
|+|||++. ++ .+||+|||+++......... ....||+.|+||
T Consensus 150 p~Nil~~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~~~~~~y~aP 192 (295)
T 2clq_A 150 GDNVLINTYSG--VLKISDFGTSKRLAGINPCT-----------------------------------ETFTGTLQYMAP 192 (295)
T ss_dssp GGGEEEETTTC--CEEECCTTTCEESCC----------------------------------------CCCCCCGGGCCH
T ss_pred hhhEEEECCCC--CEEEeecccccccCCCCCcc-----------------------------------cccCCCccccCh
Confidence 99999976 44 59999999998764321110 114689999999
Q ss_pred hhcccCC--CcccccccchhhhhHHhhcCCCCCCCCchhHHHHH----HhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 713 EQLLQGR--QTRAIDLFSLGCILFFCITGGKHPYGESFERDANI----VKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 713 E~l~~~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i----~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|++.+.. ++.++|||||||++|+|++| .+||.......... ........+...++++.+||.+||+.||++||
T Consensus 193 E~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 271 (295)
T 2clq_A 193 EIIDKGPRGYGKAADIWSLGCTIIEMATG-KPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRA 271 (295)
T ss_dssp HHHHHGGGGCSHHHHHHHHHHHHHHHHHT-SCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSC
T ss_pred hhhcCCCCCCCcHHHHHHHHHHHHHHHHC-CCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCC
Confidence 9997654 78999999999999999996 67775432221111 11122233445678999999999999999999
Q ss_pred CHHHHHcCCCCCCcc
Q 002343 787 KAQNVLNHPFFWTAD 801 (934)
Q Consensus 787 Ta~evL~HPff~~~~ 801 (934)
|+.++++||||....
T Consensus 272 s~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 272 CANDLLVDEFLKVSS 286 (295)
T ss_dssp CHHHHHTSGGGCC--
T ss_pred CHHHHhcChhhhhcc
Confidence 999999999997544
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=345.50 Aligned_cols=246 Identities=23% Similarity=0.343 Sum_probs=195.1
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. +++.++||||+++++++.+++..|+|||+|+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56888999999999999998877889999999976532 34556665 7888999999999999999999999999775
Q ss_pred C-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 551 C-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 551 ~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
+ +|.+++ ... ...+++..++.++.||+.||+|||++||+|
T Consensus 87 ~~~L~~~~-----------~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 87 HGCLSDYL-----------RTQ----------------------------RGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp TCBHHHHH-----------HHT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCcHHHHH-----------hhC----------------------------cccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 3 454444 211 234678889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.......... ....||+.|
T Consensus 128 ~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~y 171 (267)
T 3t9t_A 128 RDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSS----------------------------------TGTKFPVKW 171 (267)
T ss_dssp SSCCGGGEEECGGG--CEEECCTTGGGGBCCHHHHST----------------------------------TSTTCCGGG
T ss_pred CCCchheEEECCCC--CEEEccccccccccccccccc----------------------------------ccccccccc
Confidence 99999999997665 499999999987643211000 013578899
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|+|++++.+||...... ... +........+...++++.+||.+||+.||++|||
T Consensus 172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 251 (267)
T 3t9t_A 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 251 (267)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred cChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcC
Confidence 99999999999999999999999999999668888764332 222 2222223334445789999999999999999999
Q ss_pred HHHHHcC
Q 002343 788 AQNVLNH 794 (934)
Q Consensus 788 a~evL~H 794 (934)
+.+++++
T Consensus 252 ~~~ll~~ 258 (267)
T 3t9t_A 252 FSRLLRQ 258 (267)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=349.45 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=194.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEe--cCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVES--DQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~--~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++.. .+|+.||+|++..... +...+|+. +++.++||||+++++++. ..+..|+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVN-LLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHH-HHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 5688899999999999999855 4689999999975432 23345554 778889999999999874 4678999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||++ +|.+++. .... ....+++.+++.++.||+.||+|||
T Consensus 85 v~e~~~~~~L~~~l~-----------~~~~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH 128 (279)
T 2w5a_A 85 VMEYCEGGDLASVIT-----------KGTK-------------------------ERQYLDEEFVLRVMTQLTLALKECH 128 (279)
T ss_dssp EEECCTTEEHHHHHH-----------HHHH-------------------------TTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHH-----------hhcc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9997764 5655542 1100 1234788899999999999999999
Q ss_pred HCC-----CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 624 EIG-----LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 624 s~g-----IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
+++ |+||||||+|||++.++ .+||+|||+++.........
T Consensus 129 ~~~~~~~~ivH~dl~p~NIl~~~~~--~~kl~dfg~~~~~~~~~~~~--------------------------------- 173 (279)
T 2w5a_A 129 RRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFA--------------------------------- 173 (279)
T ss_dssp HHC------CCCCCSGGGEEECSSS--CEEECCCCHHHHC---CHHH---------------------------------
T ss_pred cccCCCCeeEEeccchhhEEEcCCC--CEEEecCchheeeccccccc---------------------------------
Confidence 999 99999999999997665 49999999998764321100
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||...... .. .+........+...++++.+||.+
T Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~ 250 (279)
T 2w5a_A 174 --KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 250 (279)
T ss_dssp --HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred --cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHC-CCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHH
Confidence 013589999999999999999999999999999999996 6777654332 22 222333333344567899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
||+.||++|||+.|+++|||+...+
T Consensus 251 ~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 251 MLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp HTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred HcCCCcccCCCHHHHHhChhhhhhc
Confidence 9999999999999999999996544
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=353.69 Aligned_cols=250 Identities=22% Similarity=0.343 Sum_probs=186.2
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHh--CCCCceeEEEEEEec----CCeE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--DQHPNIVRWYGVESD----QDFV 542 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~--l~HpNIV~l~g~~~~----~~~~ 542 (934)
+.+.+.|.+.+.||+|+||+||++. .+|+.||||++.........+|.. ++.. ++||||+++++++.+ ....
T Consensus 4 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~e~~-~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 4 RTVARDITLLECVGKGRYGEVWRGS-WQGENVAVKIFSSRDEKSWFRETE-LYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CCCGGGCEEEEEEEECSSEEEEEEE-ETTEEEEEEEECGGGHHHHHHHHH-HHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccccCcEEEEEeeccCCCcEEEEEE-ECCEEEEEEEeccccchhhHHHHH-HHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 4567889999999999999999965 489999999997665555556655 3333 799999999998654 3569
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||||.+ |+|.++++ ...+++..++.++.||+.||+||
T Consensus 82 ~lv~e~~~~----------g~L~~~l~------------------------------~~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 82 WLITHYHEM----------GSLYDYLQ------------------------------LTTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp EEEECCCTT----------CBHHHHHT------------------------------TCCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEehhhccC----------CCHHHHHh------------------------------hcccCHHHHHHHHHHHHHHHHHH
Confidence 999996653 44444432 23467888999999999999999
Q ss_pred H--------HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 623 H--------EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 623 H--------s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
| +++|+||||||+|||++.++ .+||+|||+|+............
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~~~~-------------------------- 173 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVG-------------------------- 173 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEEECC--------------------------
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCC--CEEEeeCCCeeeccccccccccc--------------------------
Confidence 9 99999999999999997665 49999999998765543221110
Q ss_pred cccceeecCCCCCccccchhcccC------CCcccccccchhhhhHHhhcCC---------CCCCCCc------hhHHHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQG------RQTRAIDLFSLGCILFFCITGG---------KHPYGES------FERDAN 753 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~------~~t~ksDIWSLGvILyeLltGg---------~~Pf~~~------~~~~~~ 753 (934)
.....||+.|+|||++.+. .++.++|||||||++|||++|. .+||... ......
T Consensus 174 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~ 248 (301)
T 3q4u_A 174 -----NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 248 (301)
T ss_dssp -----CCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred -----ccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhH
Confidence 0114699999999999876 5568999999999999999971 5566432 112222
Q ss_pred HHhhcc--cccc-----cCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 754 IVKDRK--DLFL-----VEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 754 i~~~~~--~~~~-----~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
...... ...+ ...++++.+||.+||+.||++|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 249 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 221111 1111 112367999999999999999999999985
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-40 Score=365.78 Aligned_cols=252 Identities=22% Similarity=0.324 Sum_probs=176.4
Q ss_pred eecceEEEe-eeecccCcEEEEEEEEe-cCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEE
Q 002343 470 RIGKLVVFN-KEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVY 543 (934)
Q Consensus 470 ~i~~~~~~~-~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~y 543 (934)
.+.+.|.+. +.||+|+||+||++... +|+.||||++... ....+|+..++....||||+++++++.. ....|
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 345667774 56999999999998554 6999999998653 3456677667888999999999999876 55699
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||.+ +|.+++ ... ....+++.+++.++.||+.||+||
T Consensus 103 lv~e~~~gg~L~~~l-----------~~~---------------------------~~~~l~~~~~~~i~~ql~~~l~~L 144 (336)
T 3fhr_A 103 IIMECMEGGELFSRI-----------QER---------------------------GDQAFTEREAAEIMRDIGTAIQFL 144 (336)
T ss_dssp EEEECCTTEEHHHHH-----------HTC----------------------------CCCCBHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCCCHHHHH-----------Hhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997764 555444 211 023578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|++||+||||||+|||++.++ ...+||+|||+++....... .
T Consensus 145 H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------~ 187 (336)
T 3fhr_A 145 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-------------------------------------Q 187 (336)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------------------------
T ss_pred HhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccccc-------------------------------------c
Confidence 999999999999999997533 34699999999986543211 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-----HHH-hhc---ccccccCCCHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----NIV-KDR---KDLFLVEHIPEAVD 772 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----~i~-~~~---~~~~~~~~~~e~~d 772 (934)
..+||+.|+|||++.+..++.++|||||||++|+|++| .+||........ ..+ ... ........++++.+
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (336)
T 3fhr_A 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266 (336)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHS-SCCC---------------------CCCTTTSTTCCHHHHH
T ss_pred cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHC-CCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHH
Confidence 14689999999999988999999999999999999996 667654322211 111 111 11112346789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||.+||+.||++|||+.|+++||||..
T Consensus 267 li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 267 LIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhcCccccc
Confidence 999999999999999999999999954
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=353.01 Aligned_cols=249 Identities=25% Similarity=0.322 Sum_probs=186.4
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-----ecCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEec--C
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVESD--Q 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-----~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~ 539 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++...... ...+|+. +++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE-ILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECHHHH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCC
Confidence 3457899999999999999999853 36899999999755432 3445655 8889999999999999865 4
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..+|+|||||.+ +|.+++ ... ...+++.+++.++.||+.|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~~~~qi~~~ 126 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYL-----------QKH----------------------------KERIDHIKLLQYTSQICKG 126 (295)
T ss_dssp TSCEEEEECCTTCBHHHHH-----------HHC----------------------------GGGCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHH-----------Hhc----------------------------ccccCHHHHHHHHHHHHHH
Confidence 569999997653 554444 221 1236788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++.+..........
T Consensus 127 l~~lH~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~------------------------------ 174 (295)
T 3ugc_A 127 MEYLGTKRYIHRDLATRNILVENEN--RVKIGDFGLTKVLPQDKEFFKVK------------------------------ 174 (295)
T ss_dssp HHHHHHTTCCCSCCSGGGEEEEETT--EEEECCCCSCC------------------------------------------
T ss_pred HHHHhcCCcccCCCCHhhEEEcCCC--eEEEccCcccccccCCcceeeec------------------------------
Confidence 9999999999999999999997765 49999999998765433211110
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-----------------H-HHhhccc
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----------------N-IVKDRKD 760 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----------------~-i~~~~~~ 760 (934)
....||..|+|||++.+..++.++|||||||++|+|++| ..|+........ . +......
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (295)
T 3ugc_A 175 --EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY-IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251 (295)
T ss_dssp ---CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHT-TCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC
T ss_pred --cCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhc-ccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC
Confidence 114578889999999999999999999999999999996 556654322211 1 1111222
Q ss_pred ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 761 ~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
..+...++++.+||.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 252 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 234456789999999999999999999999985
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=360.20 Aligned_cols=256 Identities=20% Similarity=0.222 Sum_probs=195.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+++.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.+ +||||+++++++.+.+..|+|
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYR-FYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp CEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHH-HHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred EEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHH-HHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 45778899999999999999999854 6799999999875433 34566776 55666 999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|.++|.+++... ...+++.+++.++.||+.||+|||++
T Consensus 84 ~e~~~~~L~~~~~~~---------------------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (330)
T 2izr_A 84 LELLGPSLEDLFDLC---------------------------------------DRTFSLKTVLMIAIQLISRMEYVHSK 124 (330)
T ss_dssp EECCCCBHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998876777765321 23567889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCC---ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLISKDKS---FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~---~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||+||||||+|||++.++. ..+||+|||+|+.+............ ....
T Consensus 125 ~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~----------------------------~~~~ 176 (330)
T 2izr_A 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYR----------------------------EHKS 176 (330)
T ss_dssp TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCC----------------------------CCCC
T ss_pred CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcccccc----------------------------ccCC
Confidence 9999999999999975432 23999999999976543321110000 0112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----hHH-HHHHhhccc---ccccCCCHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----ERD-ANIVKDRKD---LFLVEHIPEAVDLF 774 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~~~-~~i~~~~~~---~~~~~~~~e~~dLI 774 (934)
.+||+.|+|||++.+..++.++|||||||++|||++| .+||.... ... ..+...... .......+++.+||
T Consensus 177 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li 255 (330)
T 2izr_A 177 LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG-SLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYL 255 (330)
T ss_dssp CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHH
T ss_pred cCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcC-CCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHH
Confidence 5799999999999999999999999999999999996 66775421 111 111111111 11122345999999
Q ss_pred HHcccCCCCCCcCHHHHHc
Q 002343 775 TRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~ 793 (934)
.+||+.||.+||++++|++
T Consensus 256 ~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 256 RYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHCCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCCCCHHHHHH
Confidence 9999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=349.85 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=183.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
....++|.+.+.||+|+||+||++... .+..||||++..... +...+|+. +++.++||||+++++++. ++
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEC-SS
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCccceEEEEEc-cC
Confidence 344578999999999999999998543 356799999865432 23345554 788899999999999985 56
Q ss_pred eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..|+|||+|.+ +|.+++ ... ...+++.+++.++.||+.||
T Consensus 89 ~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~~~~qi~~~l 129 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFL-----------QVR----------------------------KYSLDLASLILYAYQLSTAL 129 (281)
T ss_dssp SCEEEEECCTTEEHHHHH-----------HHT----------------------------TTTSCHHHHHHHHHHHHHHH
T ss_pred ccEEEEecCCCCCHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHH
Confidence 78999997764 454444 211 23467888999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++ .+||+|||+++..........
T Consensus 130 ~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~--------------------------------- 174 (281)
T 1mp8_A 130 AYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKA--------------------------------- 174 (281)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEETT--EEEECC------------------------------------------------
T ss_pred HHHHhCCeecccccHHHEEECCCC--CEEECccccccccCccccccc---------------------------------
Confidence 999999999999999999998765 599999999987654321110
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
....||+.|+|||++.+..++.++|||||||++|||++++.+||...... .. .+........+...++++.+||.+|
T Consensus 175 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~ 253 (281)
T 1mp8_A 175 -SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 253 (281)
T ss_dssp -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred -ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 11357889999999999999999999999999999998668888654332 22 2333333334456678999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||++|||+.+++++
T Consensus 254 l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 254 WAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred ccCChhhCcCHHHHHHH
Confidence 99999999999999864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=349.26 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=197.2
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+..+++.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+..+....+|+||+++++++.+....|+|
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 356788899999999999999999854 6799999999875443 34566766444444899999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|.++|.+++... ...+++.+++.++.||+.||+|||++
T Consensus 85 ~e~~~~~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 125 (298)
T 1csn_A 85 IDLLGPSLEDLLDLC---------------------------------------GRKFSVKTVAMAAKQMLARVQSIHEK 125 (298)
T ss_dssp EECCCCBHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCCCHHHHHHHh---------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998866776665321 23467889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCC---CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLISKDK---SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~---~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||+||||||+|||++.++ ...+||+|||+|+.+............ ....
T Consensus 126 ~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~----------------------------~~~~ 177 (298)
T 1csn_A 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR----------------------------EKKN 177 (298)
T ss_dssp TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCC----------------------------CCCC
T ss_pred CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccccccc----------------------------CccC
Confidence 999999999999997543 234999999999987654322111000 0112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc----hhHH-HHHHhhcc----cccccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES----FERD-ANIVKDRK----DLFLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~----~~~~-~~i~~~~~----~~~~~~~~~e~~dL 773 (934)
..||+.|+|||++.+..++.++|||||||++|||++| .+||... .... ..+..... .......++++.+|
T Consensus 178 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (298)
T 1csn_A 178 LSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG-SLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 256 (298)
T ss_dssp CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred CCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcC-CCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHH
Confidence 5699999999999999999999999999999999996 6777542 1111 11111111 11123467899999
Q ss_pred HHHcccCCCCCCcCHHHHHc
Q 002343 774 FTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~ 793 (934)
|.+||+.||++||++++|++
T Consensus 257 i~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 257 MHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHhcCCcccCCCHHHHHH
Confidence 99999999999999999975
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=351.07 Aligned_cols=265 Identities=26% Similarity=0.428 Sum_probs=186.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEec---------
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESD--------- 538 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--------- 538 (934)
+.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVM-LLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHH-HHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456789999999999999999865 5789999999965432 23455655 7888999999999998865
Q ss_pred ----CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 539 ----QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 539 ----~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
.+..|+|||+|++ +|.+++ ... ...+++.+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~ 123 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLI-----------HSE----------------------------NLNQQRDEYWRLFR 123 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHH-----------HHS----------------------------CGGGCHHHHHHHHH
T ss_pred ccccCCceEEEEecCCCCCHHHhh-----------hcc----------------------------ccccchHHHHHHHH
Confidence 4578999997753 555554 211 11235677889999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
||+.||+|||++||+||||||+|||++.++ .+||+|||+++................
T Consensus 124 qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~--------------------- 180 (303)
T 1zy4_A 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNL--------------------- 180 (303)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCCCCCSCTTC---------------------------------
T ss_pred HHHHHHHHHHhCCeecccCCHHhEEEcCCC--CEEEeeCcchhhcccccchhccccccc---------------------
Confidence 999999999999999999999999997665 499999999987654321110000000
Q ss_pred ccccceeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcc----cccccCC
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRK----DLFLVEH 766 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~----~~~~~~~ 766 (934)
...........||+.|+|||++.+. .++.++|||||||++|+|++ ||...... ....+.... .......
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (303)
T 1zy4_A 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFDDNK 256 (303)
T ss_dssp -------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHHSTTCCCCTTCCTTT
T ss_pred cccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh----ccCCchhHHHHHHhccccccccCccccccc
Confidence 0000011225699999999999865 68999999999999999998 44432221 112222211 1122334
Q ss_pred CHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 767 ~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
++++.+||.+||+.||++|||+.++++||||.....
T Consensus 257 ~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (303)
T 1zy4_A 257 MKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292 (303)
T ss_dssp SHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred hHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence 578999999999999999999999999999976443
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=368.93 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=192.8
Q ss_pred cceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.|.+.+.||+|+||+||++... +++.||||++...... ...+|+. +++.++|||||++++++.+++..|+||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR-ILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHH-HHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHH-HHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 356888999999999999998664 6899999998754322 2345655 788999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||+ +|+|.+++... ...+++.+++.++.||+.||+|||++|
T Consensus 192 e~~~----------~g~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 192 ELVQ----------GGDFLTFLRTE----------------------------GARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp ECCT----------TCBHHHHHHHH----------------------------GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EcCC----------CCCHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9665 34444444321 123577889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+|+........... ....+|
T Consensus 234 ivHrDlkp~Nil~~~~~--~~kl~DfG~s~~~~~~~~~~~~---------------------------------~~~~~~ 278 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKN--VLKISDFGMSREEADGVYAASG---------------------------------GLRQVP 278 (377)
T ss_dssp EECSCCSGGGEEECTTC--CEEECCGGGCEECTTSEEECCS---------------------------------SCCEEE
T ss_pred cCCcccCHHHEEEcCCC--cEEECcCCCceecCCCceeecC---------------------------------CCCCCC
Confidence 99999999999997665 4999999999865432211100 002357
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhhc-ccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+.|+|||++.+..++.++|||||||++|||++++.+||....... ...+... ....+...++++.+||.+||+.||++
T Consensus 279 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 358 (377)
T 3cbl_A 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQ 358 (377)
T ss_dssp GGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred cCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchh
Confidence 789999999999999999999999999999996688887654332 2333322 22233446789999999999999999
Q ss_pred CcCHHHHHc
Q 002343 785 RPKAQNVLN 793 (934)
Q Consensus 785 RPTa~evL~ 793 (934)
|||+.++++
T Consensus 359 Rps~~~i~~ 367 (377)
T 3cbl_A 359 RPSFSTIYQ 367 (377)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999975
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=354.33 Aligned_cols=274 Identities=24% Similarity=0.330 Sum_probs=198.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
....+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++.+
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN-VLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHH-HHhhCCCCceeeEEEEEec
Confidence 34457899999999999999999854 3458999999975433 23345554 7788899999999999999
Q ss_pred CCeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+..|+|||||. ++|.+++......-..++.... . .............+++.+++.++.||+.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 161 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG-S---------------RNSSSLDHPDERALTMGDLISFAWQISQ 161 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC--------------------------------CEECHHHHHHHHHHHHH
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccc-c---------------ccccccccccccCcCHHHHHHHHHHHHH
Confidence 999999999776 4666655321100000000000 0 0000000111344788999999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++...........
T Consensus 162 ~l~~lH~~~ivH~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~~------------------------------ 209 (314)
T 2ivs_A 162 GMQYLAEMKLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSYVKR------------------------------ 209 (314)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETTT--EEEECCCTTCEECTTTSCEECS------------------------------
T ss_pred HHHHHHHCCCcccccchheEEEcCCC--CEEEccccccccccccccceec------------------------------
Confidence 99999999999999999999997665 4999999999876543321111
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||.... ......+... ....+...++++.+||.
T Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 286 (314)
T 2ivs_A 210 ---SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML 286 (314)
T ss_dssp ---SCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ---cCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHH
Confidence 114578999999999999999999999999999999995577776543 3333333332 23334456789999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||++|||+.++++|
T Consensus 287 ~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 287 QCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHccCChhhCcCHHHHHHH
Confidence 9999999999999999875
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-39 Score=352.97 Aligned_cols=249 Identities=27% Similarity=0.358 Sum_probs=181.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... ...+.|+..+++.++||||+++++++.+.+..|+|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 5678889999999999999865 4689999999976543 2345566667888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI-G 626 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~-g 626 (934)
+|++.+..+... ....+++..++.++.||+.||+|||++ |
T Consensus 105 ~~~~~~~~l~~~---------------------------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ 145 (318)
T 2dyl_A 105 LMGTCAEKLKKR---------------------------------------MQGPIPERILGKMTVAIVKALYYLKEKHG 145 (318)
T ss_dssp CCSEEHHHHHHH---------------------------------------HTSCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCcHHHHHHH---------------------------------------hccCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 885443333211 134578889999999999999999995 9
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++.+...... ....||
T Consensus 146 i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~------------------------------------~~~~~~ 187 (318)
T 2dyl_A 146 VIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAK------------------------------------DRSAGC 187 (318)
T ss_dssp CCCCCCCGGGEEECTTS--CEEECCCTTC--------------------------------------------------C
T ss_pred EEeCCCCHHHEEECCCC--CEEEEECCCchhccCCccc------------------------------------cccCCC
Confidence 99999999999997665 4999999999765432211 114589
Q ss_pred Cccccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCch---hHHHHHHhhcccccc--cCCCHHHHHHHHH
Q 002343 707 SGWQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESF---ERDANIVKDRKDLFL--VEHIPEAVDLFTR 776 (934)
Q Consensus 707 ~~Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~~~~~i~~~~~~~~~--~~~~~e~~dLI~~ 776 (934)
+.|+|||++. ...++.++|||||||++|+|++| .+||.... .....+........+ ...++++.+||.+
T Consensus 188 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 266 (318)
T 2dyl_A 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG-QFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKD 266 (318)
T ss_dssp CTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHS-SCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHH
T ss_pred ccccChhhcccccccccCCccccchhhHHHHHHHHHhC-CCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHH
Confidence 9999999994 45688999999999999999996 67776422 222233333222222 2357899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~ 799 (934)
||+.||.+||++.++++||||..
T Consensus 267 ~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 267 CLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp HTCSCTTTSCCHHHHTTSHHHHH
T ss_pred HccCChhHCcCHHHHhhCHHHHh
Confidence 99999999999999999999953
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=359.08 Aligned_cols=249 Identities=23% Similarity=0.297 Sum_probs=195.8
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---------hHHHHHHHHHHHhC--CCCceeEEEEE
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---------DVALKEIQNLIASD--QHPNIVRWYGV 535 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l--~HpNIV~l~g~ 535 (934)
+..+.++|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.+ .||||++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-LLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHH-HHHHHCSSSCSBCCEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHH-HHHhhccCCCCceEEEEE
Confidence 355677899999999999999999854 5789999999865421 22345665 44545 47999999999
Q ss_pred EecCCeEEEEEeccc--CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHH
Q 002343 536 ESDQDFVYLSLERCT--CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTR 613 (934)
Q Consensus 536 ~~~~~~~yLVmE~c~--~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 613 (934)
+.+.+..++|||+|. ++|.+++ .. ...+++.+++.++.
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l-----------~~-----------------------------~~~l~~~~~~~i~~ 156 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFI-----------TE-----------------------------RGALQEELARSFFW 156 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHH-----------HH-----------------------------HCSCCHHHHHHHHH
T ss_pred EecCCcEEEEEEcCCCCccHHHHH-----------hc-----------------------------cCCCCHHHHHHHHH
Confidence 999999999999876 3454444 21 23467888999999
Q ss_pred HHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 614 DIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 614 qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
||+.||+|||++||+||||||+|||++.+. ..+||+|||+++.+.....
T Consensus 157 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~~kL~Dfg~~~~~~~~~~------------------------------ 205 (320)
T 3a99_A 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNR-GELKLIDFGSGALLKDTVY------------------------------ 205 (320)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEEETTT-TEEEECCCTTCEECCSSCB------------------------------
T ss_pred HHHHHHHHHHHCCcEeCCCCHHHEEEeCCC-CCEEEeeCccccccccccc------------------------------
Confidence 999999999999999999999999997322 3599999999987653211
Q ss_pred ccccceeecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHH
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVD 772 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~d 772 (934)
....||+.|+|||++.+..+ +.++|||||||++|||++| ..||..... +. ..........++++.+
T Consensus 206 -------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~----~~-~~~~~~~~~~~~~~~~ 272 (320)
T 3a99_A 206 -------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDEE----II-RGQVFFRQRVSSECQH 272 (320)
T ss_dssp -------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS-SCSCCSHHH----HH-HCCCCCSSCCCHHHHH
T ss_pred -------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHC-CCCCCChhh----hh-cccccccccCCHHHHH
Confidence 11458999999999987776 7899999999999999996 777765322 12 2223344566789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
||.+||+.||++|||++++++||||.+..
T Consensus 273 li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred HHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 99999999999999999999999997643
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=362.81 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=197.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe--------cCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY--------EGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGV 535 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~--------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~ 535 (934)
....++|.+.+.||+|+||+||++... .+..||||++..... ....+|+. +++.+ +|||||+++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME-MMKMIGKHKNIINLLGA 143 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHH-HHHHhcCCchhhhheee
Confidence 344578999999999999999998542 235799999976543 23456666 55555 99999999999
Q ss_pred EecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 536 ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 536 ~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
+.+++..|+|||||.+ +|.+++ .......... ...........+++.+++.++.|
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l-----------~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~i~~q 199 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYL-----------QARRPPGLEY-------------SYNPSHNPEEQLSSKDLVSCAYQ 199 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHH-----------HHTCCSSSSS-------------CCCCCSSCCCCCCHHHHHHHHHH
T ss_pred eccCCceEEEEEecCCCcHHHHH-----------HHhccccccc-------------ccccccccccccCHHHHHHHHHH
Confidence 9999999999997754 555554 3211000000 00000001245789999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
|+.||+|||++|||||||||+|||++.++ .+||+|||+|+.+.........
T Consensus 200 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~--------------------------- 250 (382)
T 3tt0_A 200 VARGMEYLASKKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKKT--------------------------- 250 (382)
T ss_dssp HHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECSCSCCCCSSCCCTTCCC---------------------------
T ss_pred HHHHHHHHHhCCEecCCCCcceEEEcCCC--cEEEcccCcccccccccccccc---------------------------
Confidence 99999999999999999999999997665 4999999999876543221110
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhh-cccccccCCCHHHHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKD-RKDLFLVEHIPEAVD 772 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~-~~~~~~~~~~~e~~d 772 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++..||.... ......+.. .....+...++++.+
T Consensus 251 ------~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (382)
T 3tt0_A 251 ------TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM 324 (382)
T ss_dssp ------TTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHH
T ss_pred ------cCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHH
Confidence 114578999999999999999999999999999999995677876543 333333332 233344566789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~H 794 (934)
||.+||+.||++|||+.++++|
T Consensus 325 li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 325 MMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999975
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=358.08 Aligned_cols=248 Identities=23% Similarity=0.282 Sum_probs=187.2
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCc----EEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGR----SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~----~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
.+.|.+.+.||+|+||+||++.. .+++ .||+|.+.... .....+|+. +++.++|||||++++++.+.. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHH-HHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCEeEEEEEEecCC-e
Confidence 45689999999999999999854 3444 46888875432 234455655 788899999999999998865 7
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
++|+|+| .+|+|.+++... ...+++..++.++.||+.||+||
T Consensus 92 ~~v~e~~----------~~g~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~L 133 (327)
T 3poz_A 92 QLITQLM----------PFGCLLDYVREH----------------------------KDNIGSQYLLNWCVQIAKGMNYL 133 (327)
T ss_dssp EEEEECC----------TTCBHHHHHHHS----------------------------TTSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEec----------CCCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 7888844 445555554321 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+|+.+......... ..
T Consensus 134 H~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~---------------------------------~~ 178 (327)
T 3poz_A 134 EDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHA---------------------------------EG 178 (327)
T ss_dssp HHTTCCCSCCCGGGEEEEETT--EEEECCTTHHHHHTTTCC---------------------------------------
T ss_pred hhCCeeCCCCChheEEECCCC--CEEEccCcceeEccCCcccccc---------------------------------cC
Confidence 999999999999999997765 4999999999887544321111 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..||+.|+|||++.+..++.++|||||||++|||++++.+||..... .....+... ....+...+.++.+||.+||+.
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 258 (327)
T 3poz_A 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMI 258 (327)
T ss_dssp -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCS
T ss_pred CCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCC
Confidence 45788999999999999999999999999999999955788865433 333333322 2333445678999999999999
Q ss_pred CCCCCcCHHHHHcC
Q 002343 781 NPDLRPKAQNVLNH 794 (934)
Q Consensus 781 DP~~RPTa~evL~H 794 (934)
||++||++.++++|
T Consensus 259 ~p~~Rps~~ell~~ 272 (327)
T 3poz_A 259 DADSRPKFRELIIE 272 (327)
T ss_dssp CGGGSCCHHHHHHH
T ss_pred ChhhCCCHHHHHHH
Confidence 99999999999875
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=354.78 Aligned_cols=258 Identities=21% Similarity=0.314 Sum_probs=188.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||+|+||+||++.. .+++.||+|++..... +...+|+. +++.++||||+++++++.+++..|+||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK-VMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHH-HHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 5688899999999999999855 4689999999865432 23445655 78889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++... ...+++.+++.++.||+.||+|||++||+
T Consensus 89 ~~~----------~~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~~~iv 130 (310)
T 3s95_A 89 IKG----------GTLRGIIKSM----------------------------DSQYPWSQRVSFAKDIASGMAYLHSMNII 130 (310)
T ss_dssp CTT----------CBHHHHHHHC----------------------------CTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cCC----------CcHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 653 4444443221 23467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+++............... ...........+||+.
T Consensus 131 H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~gt~~ 187 (310)
T 3s95_A 131 HRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQPEGLRSL---------------------KKPDRKKRYTVVGNPY 187 (310)
T ss_dssp CSCCSTTSEEECTTSC--EEECCCTTCEECC-----------------------------------------CCCCSCGG
T ss_pred CCCCCcCeEEECCCCC--EEEeecccceecccccccccccccc---------------------cccccccccccCCCcc
Confidence 9999999999976654 9999999998775443211100000 0000001112579999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH----HHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD----ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~----~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+|||++.+..++.++|||||||++|||++| .+|+....... ...........+...++++.+||.+||+.||++
T Consensus 188 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 266 (310)
T 3s95_A 188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIGR-VNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEK 266 (310)
T ss_dssp GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHT-CCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred eeCHHHhcCCCCCcHHHHHHHHHHHHHHhcC-CCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999999999999999999996 55554321110 000011111223455678999999999999999
Q ss_pred CcCHHHHHc
Q 002343 785 RPKAQNVLN 793 (934)
Q Consensus 785 RPTa~evL~ 793 (934)
|||+.++++
T Consensus 267 Rps~~~l~~ 275 (310)
T 3s95_A 267 RPSFVKLEH 275 (310)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=372.62 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=193.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC--hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
...+.|.+.+.||+|+||+||++...++..||||++.... .+...+|+. +++.++|||||++++++. .+..|||||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEAN-VMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHH-HHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHH-HHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3446788999999999999999877778899999997543 244556665 888999999999999986 567999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||. +|+|.++|.... ...+++.+++.++.||+.||+|||+++|
T Consensus 263 ~~~----------~g~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~i 305 (454)
T 1qcf_A 263 FMA----------KGSLLDFLKSDE---------------------------GSKQPLPKLIDFSAQIAEGMAFIEQRNY 305 (454)
T ss_dssp CCT----------TCBHHHHHHSHH---------------------------HHTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecC----------CCcHHHHHHhcc---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 654 445555443210 1235778899999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+|||++.++ .+||+|||+|+.+........ ....+|.
T Consensus 306 vHrDlkp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~----------------------------------~~~~~~~ 349 (454)
T 1qcf_A 306 IHRDLRAANILVSASL--VCKIADFGLARVIEDNEYTAR----------------------------------EGAKFPI 349 (454)
T ss_dssp CCSSCSGGGEEECTTC--CEEECSTTGGGGBCCHHHHTT----------------------------------CSSSSCG
T ss_pred cCCCCCHHHEEECCCC--cEEEeeCCCceEcCCCceecc----------------------------------CCCcccc
Confidence 9999999999997665 499999999987643211100 0134788
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-cccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
.|+|||++....++.++|||||||++|||++++.+||..... .....+.. .....+...++++.+||.+||+.||++|
T Consensus 350 ~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 429 (454)
T 1qcf_A 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 429 (454)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred cccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHC
Confidence 999999999999999999999999999999966888865433 22222222 2223344567899999999999999999
Q ss_pred cCHHHHHc
Q 002343 786 PKAQNVLN 793 (934)
Q Consensus 786 PTa~evL~ 793 (934)
||+++|++
T Consensus 430 Pt~~~i~~ 437 (454)
T 1qcf_A 430 PTFEYIQS 437 (454)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999974
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=352.80 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=198.4
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
+...++|.+.+.||+|+||+||++... .++.||||++...... ...+|+. +++.++||||+++++++.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS-VMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHH-HGGGCCCTTBCCEEEEECS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHH-HHHhcCCCCEeeeEEEEcc
Confidence 456678999999999999999997543 4789999999755432 2345554 7888999999999999999
Q ss_pred CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+..|+|||+|.+ +|.+++ ....... ...-....+++.+++.++.||+.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l-----------~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYL-----------RSLRPAM-------------------ANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHH-----------HHHHHHH-------------------HHCTTCCCCCHHHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCcHHHHH-----------HHhchhh-------------------ccCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999997763 555554 2211000 00000234678899999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++...........
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~~------------------------------ 197 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKG------------------------------ 197 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTC--CEEECCTTCCCGGGGGGCEEGG------------------------------
T ss_pred HHHHHHHCCCccCCCccceEEEcCCC--eEEECcCccccccccccccccc------------------------------
Confidence 99999999999999999999997665 4999999999866433211100
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHhhcccccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVKDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~~~~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||....... .. +........+...++++.+||.
T Consensus 198 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (322)
T 1p4o_A 198 ---GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR 274 (322)
T ss_dssp ---GSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ---cCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 114578999999999999999999999999999999997788887643332 22 2222223334556789999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||.+|||+.++++|
T Consensus 275 ~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 275 MCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCcccCcCHHHHHHH
Confidence 9999999999999999986
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=360.21 Aligned_cols=254 Identities=16% Similarity=0.167 Sum_probs=188.1
Q ss_pred ecceEEEeeeecccCcEEEEEEEEec------CcEEEEEEeecCChhHHHHHHH--------------HHHHhCCCCcee
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHHDVALKEIQ--------------NLIASDQHPNIV 530 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~------g~~VAVK~l~~~~~~~~~~Ei~--------------~ll~~l~HpNIV 530 (934)
.++.|.+.+.||+|+||+||++.... ++.||||++..... ...+|+. ..+..++||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 34689999999999999999986543 47899999876542 2222222 134567899999
Q ss_pred EEEEEEecC----CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHH
Q 002343 531 RWYGVESDQ----DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (934)
Q Consensus 531 ~l~g~~~~~----~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 606 (934)
++++++.+. .+.|||||||.++|.+++... ...+++.
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~---------------------------------------~~~l~~~ 152 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEAN---------------------------------------AKRFSRK 152 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHT---------------------------------------TSCCCHH
T ss_pred eEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhc---------------------------------------cCCCCHH
Confidence 999998764 569999998866666655211 2457888
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhh
Q 002343 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKL 686 (934)
Q Consensus 607 ~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (934)
+++.++.||+.||+|||++|||||||||+|||++.+....+||+|||+|+.+............
T Consensus 153 ~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~---------------- 216 (364)
T 3op5_A 153 TVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAAD---------------- 216 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCC----------------
T ss_pred HHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccC----------------
Confidence 9999999999999999999999999999999998334446999999999887643322111100
Q ss_pred hhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhc--c---
Q 002343 687 VICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDR--K--- 759 (934)
Q Consensus 687 ~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~--~--- 759 (934)
.....+||+.|+|||++.+..++.++|||||||++|||++| .+||...... ........ .
T Consensus 217 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~ 283 (364)
T 3op5_A 217 ------------PKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG-HLPWEDNLKDPKYVRDSKIRYRENIA 283 (364)
T ss_dssp ------------SSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-CCTTGGGTTCHHHHHHHHHHHHHCHH
T ss_pred ------------cccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC-CCCccccccCHHHHHHHHHHhhhhHH
Confidence 01124699999999999999999999999999999999995 7788643211 11111100 0
Q ss_pred -----cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 760 -----DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 760 -----~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.......++++.+||.+||..||++||++.+|++
T Consensus 284 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 284 SLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 0111345789999999999999999999999875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=348.99 Aligned_cols=267 Identities=22% Similarity=0.307 Sum_probs=197.6
Q ss_pred eecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESD 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~ 538 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..+ +||||+++++++.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK-VLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHH-HHhhcccCCCeeeEEEEEec
Confidence 3456799999999999999999854 2467999999975543 33456665 55666 99999999999999
Q ss_pred CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.+..|+|||+|.+ +|.+++............ ......-....+++.+++.++.||+.
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~qi~~ 156 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKT----------------------SPAIMEDDELALDLEDLLSFSYQVAK 156 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC------------------------------------CCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccc----------------------cccccccccccCCHHHHHHHHHHHHH
Confidence 9999999998764 666665432211100000 00000001245789999999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++||+||||||+|||++.++ .+||+|||+++...........
T Consensus 157 ~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~------------------------------ 204 (313)
T 1t46_A 157 GMAFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYVVK------------------------------ 204 (313)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEETTT--EEEECCCGGGSCTTSCTTSEEC------------------------------
T ss_pred HHHHHHHCCeecCCCccceEEEcCCC--CEEEccccccccccccccceec------------------------------
Confidence 99999999999999999999997665 5999999999876554321110
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhh-cccccccCCCHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKD-RKDLFLVEHIPEAVDLF 774 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~-~~~~~~~~~~~e~~dLI 774 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||..... .....+.. .....+...++++.+||
T Consensus 205 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 281 (313)
T 1t46_A 205 ---GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIM 281 (313)
T ss_dssp ---SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred ---cCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHH
Confidence 1135788999999999999999999999999999999966888865432 22222222 22233445678999999
Q ss_pred HHcccCCCCCCcCHHHHHcC
Q 002343 775 TRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~H 794 (934)
.+||+.||.+|||+.+++++
T Consensus 282 ~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 282 KTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999864
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=358.27 Aligned_cols=253 Identities=17% Similarity=0.166 Sum_probs=185.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCChh--------------HHHHHHHHHHHhCCCCceeEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD--------------VALKEIQNLIASDQHPNIVRW 532 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~~--------------~~~~Ei~~ll~~l~HpNIV~l 532 (934)
.++.|.+.+.||+|+||+||++... ++..||||++...... ...+|+. ++..++||||+++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~-~~~~l~h~ni~~~ 113 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWI-ERKQLDYLGIPLF 113 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHH-HHHTCSCCCCCCE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHH-hhccccccCccee
Confidence 4578999999999999999998654 6789999998755321 1223333 6678899999999
Q ss_pred EEEEec----CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHH
Q 002343 533 YGVESD----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQL 608 (934)
Q Consensus 533 ~g~~~~----~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 608 (934)
++++.+ ....|+|||+|.++|.+++. . ...+++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~-----------~-----------------------------~~~~~~~~~ 153 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERLGIDLQKISG-----------Q-----------------------------NGTFKKSTV 153 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECEEEEHHHHCB-----------G-----------------------------GGBCCHHHH
T ss_pred ecccccccCCCcEEEEEEeccCCCHHHHHH-----------h-----------------------------cCCCCHHHH
Confidence 999988 78999999988656665542 1 124678899
Q ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhh
Q 002343 609 LKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVI 688 (934)
Q Consensus 609 ~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (934)
+.++.||+.||+|||++||+||||||+|||++.++...+||+|||+|+.+............
T Consensus 154 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~------------------ 215 (345)
T 2v62_A 154 LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQEN------------------ 215 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCC------------------
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhc------------------
Confidence 99999999999999999999999999999998776446999999999887543221111000
Q ss_pred hccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch---hHHHHHHhhccccc---
Q 002343 689 CECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF---ERDANIVKDRKDLF--- 762 (934)
Q Consensus 689 ~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~~~~~i~~~~~~~~--- 762 (934)
......||+.|+|||++.+..++.++|||||||++|||++| .+||.... ..............
T Consensus 216 ----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 284 (345)
T 2v62_A 216 ----------PRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCG-KLPWEQNLKDPVAVQTAKTNLLDELPQS 284 (345)
T ss_dssp ----------GGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS-SCTTGGGTTCHHHHHHHHHHHHHTTTHH
T ss_pred ----------cccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC-CCCccccccccHHHHHHHHhhcccccHH
Confidence 00125699999999999999999999999999999999996 77874321 11111111100000
Q ss_pred ------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 763 ------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 763 ------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
....++++.+||.+||+.||++||++++|++
T Consensus 285 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 285 VLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1156789999999999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=355.25 Aligned_cols=272 Identities=21% Similarity=0.247 Sum_probs=196.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
..+.|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++||||+++++++.+.+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA-LMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHH-HHHhCCCCCEEEEEEEEccCC
Confidence 4467888999999999999998654 348999999976543 23345554 788899999999999999999
Q ss_pred eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..|+|||||.+ +|.+++..........+... ... .......-....+++.+++.++.||+.||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~----~~~------------~~~~~~~~~~~~l~~~~~~~i~~qi~~~l 187 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS----DLS------------TRARVSSPGPPPLSCAEQLCIARQVAAGM 187 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC--------------------------------------CCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccc----ccc------------ccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 99999997764 66665532211000000000 000 00000001125688999999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++ .+||+|||+++.+........
T Consensus 188 ~~LH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~--------------------------------- 232 (343)
T 1luf_A 188 AYLSERKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKA--------------------------------- 232 (343)
T ss_dssp HHHHHTTCCCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCBC----------------------------------
T ss_pred HHHHhCCeecCCCCcceEEECCCC--eEEEeecCCCcccccCccccc---------------------------------
Confidence 999999999999999999997665 499999999987643321110
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH-hhcccccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV-KDRKDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~-~~~~~~~~~~~~~e~~dLI~~~ 777 (934)
.....||+.|+|||++.+..++.++|||||||++|+|++++.+||..... .....+ .......+...++++.+||.+|
T Consensus 233 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 312 (343)
T 1luf_A 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC 312 (343)
T ss_dssp ---CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHH
Confidence 01145899999999999999999999999999999999955777765433 222222 2222333455678999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||++||++.+++++
T Consensus 313 l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 313 WSKLPADRPSFCSIHRI 329 (343)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred cccCcccCCCHHHHHHH
Confidence 99999999999999863
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=364.93 Aligned_cols=249 Identities=25% Similarity=0.361 Sum_probs=180.5
Q ss_pred cceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.|.+.+.||+|+||+||++... ++..||||++..... +...+|+. +++.++|||||++++++.+.+..|
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS-IMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEeeCCceE
Confidence 356778899999999999998554 577899999975432 23445554 788999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||+ +|+|.+++... ...+++.+++.++.||+.||+|||
T Consensus 123 lv~e~~~----------~~sL~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~LH 164 (373)
T 2qol_A 123 IVTEYME----------NGSLDSFLRKH----------------------------DAQFTVIQLVGMLRGIASGMKYLS 164 (373)
T ss_dssp EEEECCT----------TCBHHHHHHTT----------------------------TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC----------CCcHHHHHHhC----------------------------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999664 34444444321 234678889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++.+.......... ...
T Consensus 165 ~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~--------------------------------~~~ 210 (373)
T 2qol_A 165 DMGYVHRDLAARNILINSNL--VCKVSDFGLGRVLEDDPEAAYTT--------------------------------RGG 210 (373)
T ss_dssp HTTCCCSCCCGGGEEECTTC--CEEECCC---------------------------------------------------
T ss_pred HCCeeCCCCCcceEEEcCCC--CEEECcCccccccccCCccceec--------------------------------cCC
Confidence 99999999999999996655 59999999998765432211000 013
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||+.|+|||++.+..++.++|||||||++|||++.|.+||..... .....+... ....+...+.++.+||.+||+.|
T Consensus 211 ~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~d 290 (373)
T 2qol_A 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290 (373)
T ss_dssp ---CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSS
T ss_pred CcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcC
Confidence 4678999999999999999999999999999999855777765433 223333222 22233456789999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++||++.++++
T Consensus 291 p~~RPs~~~i~~ 302 (373)
T 2qol_A 291 RNNRPKFEQIVS 302 (373)
T ss_dssp GGGSCCHHHHHH
T ss_pred hhhCcCHHHHHH
Confidence 999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=347.81 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=196.2
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec--------
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD-------- 538 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-------- 538 (934)
+..++..|.+.+.||+|+||+||++... +|+.||||++.... +...+|+. ++..++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVK-ALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHH-HHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHH-HHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3567788999999999999999998654 79999999997543 34556765 7788899999999998865
Q ss_pred --------CCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHH
Q 002343 539 --------QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (934)
Q Consensus 539 --------~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 609 (934)
....|+|||||++ +|.+++ ... ....+++..++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l-----------~~~---------------------------~~~~~~~~~~~ 125 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWI-----------EKR---------------------------RGEKLDKVLAL 125 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHH-----------HHG---------------------------GGSCCCHHHHH
T ss_pred cccccccCcceEEEEEeccCCCCHHHHH-----------hhc---------------------------cCCCCCHHHHH
Confidence 4568999997764 555444 211 12456788899
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhh
Q 002343 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVIC 689 (934)
Q Consensus 610 ~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (934)
.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+......
T Consensus 126 ~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~------------------------- 178 (284)
T 2a19_B 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKR------------------------- 178 (284)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEESSCCSCC-------------------------
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC--CEEECcchhheeccccccc-------------------------
Confidence 9999999999999999999999999999997765 5999999999876543211
Q ss_pred ccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHH
Q 002343 690 ECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPE 769 (934)
Q Consensus 690 ~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e 769 (934)
....||+.|+|||++.+..++.++|||||||++|+|++|..+++ ........+ . ........+++
T Consensus 179 -----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~ 243 (284)
T 2a19_B 179 -----------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF-ETSKFFTDL-R--DGIISDIFDKK 243 (284)
T ss_dssp -----------CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH-HHHHHHHHH-H--TTCCCTTSCHH
T ss_pred -----------cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch-hHHHHHHHh-h--cccccccCCHH
Confidence 11458999999999999999999999999999999999754433 221111111 1 12223446789
Q ss_pred HHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 770 ~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
+.+||.+||+.||++|||+.|+++|++.+.
T Consensus 244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999999999987644
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=355.25 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=184.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---------hHHHHHHHHHHHhC----CCCceeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---------DVALKEIQNLIASD----QHPNIVRWYG 534 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l----~HpNIV~l~g 534 (934)
..+.+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. ++..+ +||||+++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA-LLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHH-HHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHH-HHHhhcccCCCCCeeeEEE
Confidence 45667899999999999999999854 5689999999965432 11234555 34444 8999999999
Q ss_pred EEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 535 ~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
++.+.+..|+|||++ ..+++|.+++.. ...+++.+++.++.|
T Consensus 106 ~~~~~~~~~~v~e~~---------~~~~~L~~~l~~-----------------------------~~~~~~~~~~~~~~q 147 (312)
T 2iwi_A 106 WFETQEGFMLVLERP---------LPAQDLFDYITE-----------------------------KGPLGEGPSRCFFGQ 147 (312)
T ss_dssp EC-----CEEEEECC---------SSEEEHHHHHHH-----------------------------HCSCCHHHHHHHHHH
T ss_pred EEecCCeEEEEEEec---------CCCCCHHHHHHh-----------------------------cCCCCHHHHHHHHHH
Confidence 999999999999962 223334343321 234678889999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEe-cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLIS-KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVF 693 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~-~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (934)
|+.||+|||++||+||||||+|||++ .++ .+||+|||+++.......
T Consensus 148 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~kl~dfg~~~~~~~~~~------------------------------ 195 (312)
T 2iwi_A 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRG--CAKLIDFGSGALLHDEPY------------------------------ 195 (312)
T ss_dssp HHHHHHHHHHHTEECCCCSGGGEEEETTTT--EEEECCCSSCEECCSSCB------------------------------
T ss_pred HHHHHHHHHHCCeeecCCChhhEEEeCCCC--eEEEEEcchhhhcccCcc------------------------------
Confidence 99999999999999999999999997 443 599999999987654221
Q ss_pred ccccceeecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHH
Q 002343 694 QFGVLFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVD 772 (934)
Q Consensus 694 ~~g~~~~t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~d 772 (934)
....||+.|+|||++.+..+ +.++|||||||++|+|++| ..||..... +.. .........++++.+
T Consensus 196 -------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~----~~~-~~~~~~~~~~~~~~~ 262 (312)
T 2iwi_A 196 -------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG-DIPFERDQE----ILE-AELHFPAHVSPDCCA 262 (312)
T ss_dssp -------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS-SCSCCSHHH----HHH-TCCCCCTTSCHHHHH
T ss_pred -------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC-CCCCCChHH----Hhh-hccCCcccCCHHHHH
Confidence 11458999999999987776 5699999999999999996 778765322 222 222334556789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||.+||+.||++|||++|+++||||.....
T Consensus 263 li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 263 LIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 999999999999999999999999976443
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=353.58 Aligned_cols=274 Identities=22% Similarity=0.282 Sum_probs=197.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCC----hhHHHHHHHHHHHhC-CCCceeEEEEEEe
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTH----HDVALKEIQNLIASD-QHPNIVRWYGVES 537 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l-~HpNIV~l~g~~~ 537 (934)
....+.|.+.+.||+|+||+||++... +++.||||++.... .+...+|+. ++..+ +||||+++++++.
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK-MMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHH-HHHHHCCCTTBCCEEEEEC
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEe
Confidence 344577999999999999999998652 45689999996532 234566776 55666 9999999999999
Q ss_pred cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 538 ~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
+.+..|+|||||++ +|.+++....+.+...-.. .. ... .....-....+++.+++.++.||+
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~----~~----~~~---------~~~~~~~~~~l~~~~~~~i~~qi~ 182 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE----YE----NQK---------RLEEEEDLNVLTFEDLLCFAYQVA 182 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------------------------CCHHHHHHHHHHHH
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccc----hh----hhc---------ccccccccccCCHHHHHHHHHHHH
Confidence 99999999998764 6666664332221100000 00 000 000000124578899999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 183 ~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~----------------------------- 231 (344)
T 1rjb_A 183 KGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVR----------------------------- 231 (344)
T ss_dssp HHHHHHHHTTEEETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTSEEE-----------------------------
T ss_pred HHHHHHHhCCcccCCCChhhEEEcCCC--cEEeCCCccCcccccCccceec-----------------------------
Confidence 999999999999999999999997665 5999999999876543221110
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc-ccccccCCCHHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR-KDLFLVEHIPEAVDL 773 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~-~~~~~~~~~~e~~dL 773 (934)
....||+.|+|||++.+..++.++|||||||++|+|+|++.+||..... .....+... ....+...++++.+|
T Consensus 232 ----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 307 (344)
T 1rjb_A 232 ----GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYII 307 (344)
T ss_dssp ----TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ----cCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 1135788999999999999999999999999999999956888865432 222223222 223344567899999
Q ss_pred HHHcccCCCCCCcCHHHHHcCC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~HP 795 (934)
|.+||+.||.+|||+.++++|.
T Consensus 308 i~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 308 MQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHHH
Confidence 9999999999999999999864
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=344.39 Aligned_cols=246 Identities=25% Similarity=0.334 Sum_probs=189.7
Q ss_pred EEEeeeecccCcEEEEEEEE---ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 475 VVFNKEIAKGSNGTVVLEGN---YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~---~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+...+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++ ..+..|+|||
T Consensus 12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~-~~~~~~lv~e 89 (287)
T 1u59_A 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLDNPYIVRLIGVC-QAEALMLVME 89 (287)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHH-HHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence 34445999999999999753 3678999999976432 23445655 77888999999999999 4566999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
+|.+ +|.+++ .. ....+++.+++.++.||+.||+|||++|
T Consensus 90 ~~~~~~L~~~l-----------~~----------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 90 MAGGGPLHKFL-----------VG----------------------------KREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp CCTTEEHHHHH-----------TT----------------------------CTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCHHHHH-----------Hh----------------------------CCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7764 444443 21 0234678899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+|||++.++ .+||+|||+++.+........... ...||
T Consensus 131 i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~--------------------------------~~~~~ 176 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARS--------------------------------AGKWP 176 (287)
T ss_dssp EECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECCCC--------------------------------SSCCC
T ss_pred EeeCCCchheEEEcCCC--CEEECcccceeeeccCcceeeccc--------------------------------ccccc
Confidence 99999999999997665 599999999987754432211111 14578
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+.|+|||++.+..++.++|||||||++|+|++++.+||...... ... +........+...++++.+||.+||+.||++
T Consensus 177 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 256 (287)
T 1u59_A 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWED 256 (287)
T ss_dssp GGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred ccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhh
Confidence 99999999998899999999999999999999557788654332 222 2233333345567889999999999999999
Q ss_pred CcCHHHHHcCC
Q 002343 785 RPKAQNVLNHP 795 (934)
Q Consensus 785 RPTa~evL~HP 795 (934)
||++.++++|.
T Consensus 257 Rps~~~l~~~l 267 (287)
T 1u59_A 257 RPDFLTVEQRM 267 (287)
T ss_dssp SCCHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 99999999874
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=355.55 Aligned_cols=244 Identities=22% Similarity=0.268 Sum_probs=181.5
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEEEEEEecCC----eEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQD----FVYLS 545 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~----~~yLV 545 (934)
.+.|.+.+.||+|+||+||++. ..++.||||++...... ...+|+. ++..++|||||++++++.+.. .+|+|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQ-LLNEYVAVKIFPIQDKQSWQNEYEVY-SLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEE-ETTEEEEEEEECGGGHHHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEE-ECCCEEEEEEeecCchHHHHHHHHHH-HHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 3679999999999999999974 45899999999755433 2334444 677889999999999998744 47999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.+++. ...+++.+++.++.||+.||+|||++
T Consensus 101 ~e~~~~----------g~L~~~l~------------------------------~~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 101 TAFHEK----------GSLSDFLK------------------------------ANVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp EECCTT----------CBHHHHHH------------------------------HCCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred EecCCC----------CCHHHHHH------------------------------hcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 997654 34444332 23467888999999999999999999
Q ss_pred ----------CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 626 ----------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 626 ----------gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
||+||||||+|||++.++ .+||+|||+|+.+.........
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~--~~kL~DFg~a~~~~~~~~~~~~---------------------------- 190 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFGLALKFEAGKSAGDT---------------------------- 190 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTC--CEEECCCTTCEEECTTSCCCCC----------------------------
T ss_pred ccccccccCCCEEeCCCChHhEEECCCC--eEEEccCCcccccccccCcccc----------------------------
Confidence 999999999999997655 5999999999877654321110
Q ss_pred ccceeecCCCCCccccchhccc-----CCCcccccccchhhhhHHhhcCCCCCCCCch-----------------hHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQ-----GRQTRAIDLFSLGCILFFCITGGKHPYGESF-----------------ERDAN 753 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~-----~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----------------~~~~~ 753 (934)
...+||+.|+|||++.+ ..++.++|||||||++|||++| .+||.... .....
T Consensus 191 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (322)
T 3soc_A 191 -----HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR-CTAADGPVDEYMLPFEEEIGQHPSLEDMQE 264 (322)
T ss_dssp -----TTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-BTTSSSCCCCCCCTTHHHHCSSCCHHHHHH
T ss_pred -----ccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC-CCCCCCCcchhccchhhhhccCCchhhhhh
Confidence 11469999999999986 3567789999999999999996 55664321 11111
Q ss_pred HHhhccc-cccc------CCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 754 IVKDRKD-LFLV------EHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 754 i~~~~~~-~~~~------~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
....... .... ...+++.+||.+||+.||++|||+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 265 VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 1111111 1000 11246999999999999999999999985
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=345.73 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=191.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEE-ecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVE-SDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~-~~~~~~y 543 (934)
..|.+.+.||+|+||+||++...+ +..||||.+..... +...+|+. +++.++||||+++++++ .+++..|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHH-HHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHH-HHHhCCCCCEeeeeeEEEcCCCceE
Confidence 568899999999999999985432 34699999875433 23445554 88899999999999985 4567899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||+|.+ |+|.+++... ...+++.+++.++.||+.||+|||
T Consensus 104 ~v~e~~~~----------~~L~~~l~~~----------------------------~~~~~~~~~~~i~~ql~~~l~~lH 145 (298)
T 3f66_A 104 VVLPYMKH----------GDLRNFIRNE----------------------------THNPTVKDLIGFGLQVAKGMKYLA 145 (298)
T ss_dssp EEEECCTT----------CBHHHHHHCT----------------------------TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC----------CCHHHHHHhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997664 3444433211 234577889999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+|+.+.......... .+..
T Consensus 146 ~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~-------------------------------~~~~ 192 (298)
T 3f66_A 146 SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHN-------------------------------KTGA 192 (298)
T ss_dssp HTTCCCSCCSGGGEEECTTC--CEEECSCGGGCCCSCGGGCBC------------------------------------C
T ss_pred hCCccCCCCchheEEECCCC--CEEECcccccccccccchhcccc-------------------------------ccCC
Confidence 99999999999999997655 49999999998765432211111 1124
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||+.|+|||++.+..++.++|||||||++|+|++|+.+||....... ..+........+...++++.+||.+||+.|
T Consensus 193 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 272 (298)
T 3f66_A 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 272 (298)
T ss_dssp CBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence 688999999999999999999999999999999998888887643322 233333334444556789999999999999
Q ss_pred CCCCcCHHHHHc
Q 002343 782 PDLRPKAQNVLN 793 (934)
Q Consensus 782 P~~RPTa~evL~ 793 (934)
|++|||+.++++
T Consensus 273 p~~Rps~~ell~ 284 (298)
T 3f66_A 273 AEMRPSFSELVS 284 (298)
T ss_dssp GGGSCCHHHHHH
T ss_pred hhhCcCHHHHHH
Confidence 999999999986
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=345.59 Aligned_cols=250 Identities=23% Similarity=0.287 Sum_probs=197.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
....+.|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 445677999999999999999998654 488999999976543 34456665 78889999999999999999999999
Q ss_pred Eeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|. ++|.+++ ... ....+++..++.++.||+.||+|||+
T Consensus 88 ~e~~~~~~L~~~~-----------~~~---------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (288)
T 3kfa_A 88 TEFMTYGNLLDYL-----------REC---------------------------NRQEVSAVVLLYMATQISSAMEYLEK 129 (288)
T ss_dssp EECCTTEEHHHHH-----------HHC---------------------------CTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHH-----------Hhc---------------------------ccCCccHhHHHHHHHHHHHHHHHHHH
Confidence 99776 3555544 211 12346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++.......... ....
T Consensus 130 ~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~----------------------------------~~~~ 173 (288)
T 3kfa_A 130 KNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAH----------------------------------AGAK 173 (288)
T ss_dssp HTCCCSCCSGGGEEECGGG--CEEECCCCGGGTSCSSSSEEE----------------------------------TTEE
T ss_pred CCccCCCCCcceEEEcCCC--CEEEccCccceeccCCccccc----------------------------------cCCc
Confidence 9999999999999997665 499999999987654322111 0134
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhh-cccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.|+|||++.+..++.++|||||||++|+|++++.+||..... .....+.. .....+...++++.+||.+||+.||
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 253 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCCh
Confidence 788999999999999999999999999999999966888865433 22233322 2333445567899999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
.+|||+.++++
T Consensus 254 ~~Rps~~~~~~ 264 (288)
T 3kfa_A 254 SDRPSFAEIHQ 264 (288)
T ss_dssp GGSCCHHHHHH
T ss_pred hhCcCHHHHHH
Confidence 99999999975
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=346.41 Aligned_cols=248 Identities=26% Similarity=0.338 Sum_probs=188.7
Q ss_pred cceEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC--C
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ--D 540 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~ 540 (934)
.+.|.+.+.||+|+||+||++. ..+++.||||++..... +...+|+. +++.++||||+++++++.+. +
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE-ILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHH-HHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHH-HHHhCCCCCeeeeeeEEecCCCc
Confidence 3568899999999999999986 34689999999875432 34455665 78899999999999999876 6
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.+|+|||+|.+ |+|.+++... ...+++.+++.++.||+.||+
T Consensus 99 ~~~lv~e~~~~----------~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 99 GIKLIMEFLPS----------GSLKEYLPKN----------------------------KNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp CEEEEEECCTT----------CBHHHHHHHH----------------------------TTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCC----------CcHHHHHHhc----------------------------cccCCHHHHHHHHHHHHHHHH
Confidence 79999997654 3444433211 234678899999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++............
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~-------------------------------- 186 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEYYTVK-------------------------------- 186 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCCEEECC--------------------------------
T ss_pred HhhcCCcccCCCchheEEEcCCC--CEEECcccccccccCCCcceecc--------------------------------
Confidence 99999999999999999997765 59999999998876543221111
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh----------------HHHHHHh-hcccccc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE----------------RDANIVK-DRKDLFL 763 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~----------------~~~~i~~-~~~~~~~ 763 (934)
....||..|+|||++.+..++.++|||||||++|+|++| .+|+..... .....+. ......+
T Consensus 187 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (302)
T 4e5w_A 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY-CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP 265 (302)
T ss_dssp CCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-TCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCC
T ss_pred CCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHc-cCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCC
Confidence 114588999999999999999999999999999999997 444432211 1111111 2222334
Q ss_pred cCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 764 VEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 764 ~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
...++++.+||.+||+.||.+|||+.++++
T Consensus 266 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 456789999999999999999999999985
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=366.23 Aligned_cols=244 Identities=26% Similarity=0.361 Sum_probs=190.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~-~~yLVmE~ 548 (934)
..+.|.+.+.||+|+||+||++. ..|+.||||++..... +...+|+. +++.++|||||++++++.+.+ ..||||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKNDATAQAFLAEAS-VMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEE-ETTEEEEEEEESSCTTSHHHHHHHH-HHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred ChHHeEEEeeecCcCCeeEEEEE-ecCCeEEEEEeCCchHHHHHHHHHH-HHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 34668889999999999999864 5688999999976544 34455655 889999999999999987655 79999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.+++.... ...+++..++.++.||+.||+|||++|||
T Consensus 269 ~~----------~g~L~~~l~~~~---------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 269 MA----------KGSLVDYLRSRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp CT----------TCBHHHHHHHHC---------------------------TTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cC----------CCcHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 64 444444443210 12357788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+|+....... ...+|+.
T Consensus 312 HrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~--------------------------------------~~~~~~~ 351 (450)
T 1k9a_A 312 HRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQD--------------------------------------TGKLPVK 351 (450)
T ss_dssp CSCCCGGGEEECTTS--CEEECCCTTCEECC--------------------------------------------CCCTT
T ss_pred CCCCCHhhEEECCCC--CEEEeeCCCccccccccc--------------------------------------CCCCCcc
Confidence 999999999997665 499999999985432110 1347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|||++.|.+||..... .... +........+...++++.+||.+||+.||++||
T Consensus 352 y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rp 431 (450)
T 1k9a_A 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRP 431 (450)
T ss_dssp TSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred eeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence 99999999999999999999999999999956888865432 2222 223323334456678999999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
|+.++++
T Consensus 432 t~~~l~~ 438 (450)
T 1k9a_A 432 TFLQLRE 438 (450)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999875
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=341.83 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=193.9
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
....+.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. +++.++||||+++++++.+ +..|+||
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN-LMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHH-HHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 445578999999999999999998877788999999975432 34556665 7888899999999999874 5689999
Q ss_pred eccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|+|. ++|.+++ ... ....+++.+++.++.||+.||+|||++
T Consensus 87 e~~~~~~L~~~l-----------~~~---------------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (279)
T 1qpc_A 87 EYMENGSLVDFL-----------KTP---------------------------SGIKLTINKLLDMAAQIAEGMAFIEER 128 (279)
T ss_dssp ECCTTCBHHHHT-----------TSH---------------------------HHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCHHHHH-----------hcC---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9764 3454443 211 012467888999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||+||||||+|||++.++ .+||+|||+++.......... ....|
T Consensus 129 ~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~----------------------------------~~~~~ 172 (279)
T 1qpc_A 129 NYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAR----------------------------------EGAKF 172 (279)
T ss_dssp TEECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCEECC----------------------------------TTCCC
T ss_pred CeeccCCCHhhEEEcCCC--CEEECCCcccccccCcccccc----------------------------------cCCCC
Confidence 999999999999997655 499999999987654321111 01347
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|+.|+|||++.+..++.++|||||||++|+|++++.+||...... ....+ .......+...++++.+||.+||+.||+
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 252 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPE 252 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChh
Confidence 889999999998899999999999999999999668888654332 22222 2222333445678999999999999999
Q ss_pred CCcCHHHHHc
Q 002343 784 LRPKAQNVLN 793 (934)
Q Consensus 784 ~RPTa~evL~ 793 (934)
+|||++++++
T Consensus 253 ~Rps~~~l~~ 262 (279)
T 1qpc_A 253 DRPTFDYLRS 262 (279)
T ss_dssp GSCCHHHHHH
T ss_pred hCCCHHHHHH
Confidence 9999999985
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=342.71 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=189.6
Q ss_pred eEEEeeeecccCcEEEEEEEEec-C---cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE-EE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYE-G---RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV-YL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~-g---~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~-yL 544 (934)
.|...+.||+|+||+||++...+ + ..||||.+..... +...+|+. +++.++||||+++++++.+.+.. |+
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL-LMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHH-HHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHH-HHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 46678999999999999985433 2 3799999875443 23345554 78889999999999999876655 99
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|. +|+|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 101 v~e~~~----------~~~L~~~~~~~----------------------------~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (298)
T 3pls_A 101 LLPYMC----------HGDLLQFIRSP----------------------------QRNPTVKDLISFGLQVARGMEYLAE 142 (298)
T ss_dssp EECCCT----------TCBHHHHHHCT----------------------------TCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccc----------CCCHHHHHhcc----------------------------ccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999654 34444443221 2345778899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+|+.+.......... .....
T Consensus 143 ~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~-------------------------------~~~~~ 189 (298)
T 3pls_A 143 QKFVHRDLAARNCMLDESF--TVKVADFGLARDILDREYYSVQQ-------------------------------HRHAR 189 (298)
T ss_dssp TTCCCSCCSGGGEEECTTC--CEEECCTTSSCTTTTGGGGCSCC-------------------------------SSCTT
T ss_pred CCcccCCCCcceEEEcCCC--cEEeCcCCCcccccCCccccccc-------------------------------CcCCC
Confidence 9999999999999997665 49999999998765432111110 01145
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-H-HHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-N-IVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.|+|||.+.+..++.++|||||||++|+|++|+.+||........ . +........+...++++.+||.+||+.||
T Consensus 190 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 269 (298)
T 3pls_A 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADP 269 (298)
T ss_dssp CGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCCh
Confidence 889999999999999999999999999999999988888876543322 2 22223333344567899999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
.+|||+.++++
T Consensus 270 ~~Rps~~~ll~ 280 (298)
T 3pls_A 270 AVRPTFRVLVG 280 (298)
T ss_dssp GGSCCHHHHHH
T ss_pred hhCcCHHHHHH
Confidence 99999999985
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=368.52 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=189.8
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.|.+.+.||+|+||+||++....+..||||++..... +...+|+. +++.++|||||++++++.+ +..||||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 3466888999999999999998777778899999975432 34556665 8889999999999999876 678999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.++|... ....+++.+++.++.||+.||+|||++|||
T Consensus 260 ~~----------~gsL~~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 302 (452)
T 1fmk_A 260 MS----------KGSLLDFLKGE---------------------------TGKYLRLPQLVDMAAQIASGMAYVERMNYV 302 (452)
T ss_dssp CT----------TCBHHHHHSHH---------------------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hc----------CCCHHHHHHhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 54 44555544321 023467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+|+.......... ....||..
T Consensus 303 HrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~----------------------------------~~~~~~~~ 346 (452)
T 1fmk_A 303 HRDLRAANILVGENL--VCKVADFGLARLIEDNEYTAR----------------------------------QGAKFPIK 346 (452)
T ss_dssp CSCCSGGGEEECGGG--CEEECCCCTTC------------------------------------------------CCGG
T ss_pred CCCCChhhEEECCCC--CEEECCCccceecCCCceecc----------------------------------cCCccccc
Confidence 999999999997654 599999999987654321100 01347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|||++++.+||...... ....+... ....+...++++.+||.+||+.||++||
T Consensus 347 y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 426 (452)
T 1fmk_A 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP 426 (452)
T ss_dssp GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred ccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 999999999999999999999999999999668888764332 22222222 2233455678999999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
|++++++
T Consensus 427 t~~~l~~ 433 (452)
T 1fmk_A 427 TFEYLQA 433 (452)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=354.60 Aligned_cols=262 Identities=22% Similarity=0.270 Sum_probs=196.0
Q ss_pred eecceEEEeeeecccCcEEEEEEE------EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~------~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
...+.|.+.+.||+|+||+||++. ..+++.||||++..... ....+|+. +++.++||||+++++++.+.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHH-HHhhCCCCCCCeEEEEEcCC
Confidence 345778999999999999999975 24578999999965432 23445554 77888999999999999999
Q ss_pred CeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+..|+|||||. ++|.+++. ...... .....+++.+++.++.||+.|
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~-----------~~~~~~----------------------~~~~~~~~~~~~~i~~qi~~a 152 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLR-----------ETRPRP----------------------SQPSSLAMLDLLHVARDIACG 152 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHH-----------HTSCCS----------------------SSTTSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcHHHHHH-----------hhcccc----------------------cccccccHHHHHHHHHHHHHH
Confidence 99999999774 35555542 211000 012347788999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
|+|||++||+||||||+|||++.++ ...+||+|||+++...........
T Consensus 153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~------------------------------ 202 (327)
T 2yfx_A 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG------------------------------ 202 (327)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------C------------------------------
T ss_pred HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccC------------------------------
Confidence 9999999999999999999997433 346999999999866443211100
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||...... ....+ .......+...++++.+||.
T Consensus 203 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 279 (327)
T 2yfx_A 203 ---GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMT 279 (327)
T ss_dssp ---CGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ---CCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 11458999999999999999999999999999999999668888764333 22222 22233334556789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~ 798 (934)
+||+.||.+||++.++++|.|+.
T Consensus 280 ~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 280 QCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999998753
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=348.01 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=186.4
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
....+.|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++||||+++++++.+.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAA-CMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHH-HHHTCCCTTBCCCCEEEEC-
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHH-HHhcCCCCCeeeeeEEEeec
Confidence 445678999999999999999998554 345899999864422 23445554 78889999999999999875
Q ss_pred C-----eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 540 D-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 540 ~-----~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
+ ..|+|||+|.+ |+|.+++...... .....+++.+++.++.|
T Consensus 109 ~~~~~~~~~~v~e~~~~----------~~L~~~l~~~~~~-----------------------~~~~~~~~~~~~~i~~q 155 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKY----------GDLHTYLLYSRLE-----------------------TGPKHIPLQTLLKFMVD 155 (313)
T ss_dssp ------CEEEEEECCTT----------CBHHHHHHHTTBT-----------------------TSCCCCCHHHHHHHHHH
T ss_pred cccCCcccEEEEecccC----------CCHHHHHHHhhhh-----------------------cCCccCCHHHHHHHHHH
Confidence 5 45999996653 3444433211100 01345788999999999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQ 694 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (934)
|+.||+|||++||+||||||+|||++.++ .+||+|||+++.+........
T Consensus 156 i~~aL~~LH~~~ivH~dikp~NIli~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------- 205 (313)
T 3brb_A 156 IALGMEYLSNRNFLHRDLAARNCMLRDDM--TVCVADFGLSKKIYSGDYYRQ---------------------------- 205 (313)
T ss_dssp HHHHHHHHHTTTCCCCCCSGGGEEECTTS--CEEECSCSCC---------------------------------------
T ss_pred HHHHHHHHHhCCcccCCCCcceEEEcCCC--cEEEeecCcceecccccccCc----------------------------
Confidence 99999999999999999999999997665 499999999987654321110
Q ss_pred cccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccccccCCCHHHHH
Q 002343 695 FGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIPEAVD 772 (934)
Q Consensus 695 ~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~e~~d 772 (934)
.....||+.|+|||++.+..++.++|||||||++|+|++++.+||....... ..+........+...++++.+
T Consensus 206 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 280 (313)
T 3brb_A 206 -----GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYE 280 (313)
T ss_dssp ----------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHH
T ss_pred -----ccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHH
Confidence 0113578899999999999999999999999999999997788886543322 223333333445566789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~H 794 (934)
||.+||..||++|||+.++++|
T Consensus 281 li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 281 IMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=359.64 Aligned_cols=254 Identities=24% Similarity=0.292 Sum_probs=191.5
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
....+.|.+.+.||+|+||+||++...+|+.||||++..... +...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE-TLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHH-GGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHH-HHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 345567888899999999999998877799999999865432 33455655 77889999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||.+ +|.+++.... . ....+++.+++.++.||+.||+|||+
T Consensus 114 ~e~~~~~~L~~~l~~~~-----------~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~ 157 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGSD-----------L-------------------------PTMSMSWEQRLEICIGAARGLHYLHT 157 (321)
T ss_dssp EECCTTCBTGGGSSSSC-----------C-------------------------CSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHHhccC-----------C-------------------------CccccCHHHHHHHHHHHHHHHHHhcC
Confidence 998764 6665542100 0 02347888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++.......... .+...
T Consensus 158 ~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------------~~~~~ 202 (321)
T 2qkw_B 158 RAIIHRDVKSINILLDENF--VPKITDFGISKKGTELDQTHL---------------------------------STVVK 202 (321)
T ss_dssp TTEECSCCCSTTEEECTTC--CEEECCCTTCEECSSSSCCCC---------------------------------BCCCE
T ss_pred CCeecCCCCHHHEEECCCC--CEEEeeccccccccccccccc---------------------------------ccccC
Confidence 9999999999999997665 499999999986543221110 01145
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HH---HH----HHhhcc----------cccccCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD---AN----IVKDRK----------DLFLVEH 766 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~---~~----i~~~~~----------~~~~~~~ 766 (934)
||+.|+|||++.+..++.++|||||||++|||++| .+||..... .. .. ...... .......
T Consensus 203 gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (321)
T 2qkw_B 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPES 281 (321)
T ss_dssp EETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHC-CTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHH
T ss_pred CCccccCHHHhcCCCCCcccchHhHHHHHHHHHhC-CCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHH
Confidence 89999999999999999999999999999999997 555543211 10 00 000000 0011122
Q ss_pred CHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 767 IPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 767 ~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
+.++.+|+.+||+.||++|||+.++++|.
T Consensus 282 ~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp HHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 35788999999999999999999999763
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=361.21 Aligned_cols=253 Identities=17% Similarity=0.172 Sum_probs=186.9
Q ss_pred eecceEEEeeeecccCcEEEEEE------EEecCcEEEEEEeecCChhHHHHHHHHHHHhCC---CCceeEEEEEEecCC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLE------GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQ---HPNIVRWYGVESDQD 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~------~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~---HpNIV~l~g~~~~~~ 540 (934)
..++.|.+.+.||+|+||+||++ ...+++.||||++.........+|++ +++.++ |+||+++++++...+
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~-~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQ-LMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHH-HHHHSCGGGGGGBCCEEEEEECSS
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHH-HHHHhhhhhhhhhhhhheeeecCC
Confidence 34578999999999999999998 45678999999998766666666665 555555 999999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|||||||. +|+|.+++..... .....+++.+++.++.||+.||+
T Consensus 141 ~~~lv~e~~~----------~g~L~~~l~~~~~------------------------~~~~~l~~~~~~~i~~qi~~~L~ 186 (365)
T 3e7e_A 141 GSVLVGELYS----------YGTLLNAINLYKN------------------------TPEKVMPQGLVISFAMRMLYMIE 186 (365)
T ss_dssp CEEEEECCCC----------SCBHHHHHHHHHT------------------------STTCSCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccC----------CCcHHHHHHHhhc------------------------ccccCCCHHHHHHHHHHHHHHHH
Confidence 9999999665 3444444432110 01345789999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecC---------CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 621 HLHEIGLIHRDLKPQNVLISKD---------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d---------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
|||++|||||||||+|||++.+ ....+||+|||+|+.+.......
T Consensus 187 ~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~-------------------------- 240 (365)
T 3e7e_A 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT-------------------------- 240 (365)
T ss_dssp HHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTE--------------------------
T ss_pred HHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCc--------------------------
Confidence 9999999999999999999760 13459999999998654321111
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHH
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~ 771 (934)
..+..+||+.|||||++.+..++.++|||||||++|||++| .+||......... ...........+.+.
T Consensus 241 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~---~~~~~~~~~~~~~~~ 309 (365)
T 3e7e_A 241 -------IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG-TYMKVKNEGGECK---PEGLFRRLPHLDMWN 309 (365)
T ss_dssp -------EECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS-SCCCEEEETTEEE---ECSCCTTCSSHHHHH
T ss_pred -------eeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhC-CCccccCCCCcee---echhccccCcHHHHH
Confidence 11225799999999999999999999999999999999997 5565432211100 000111112346788
Q ss_pred HHHHHcccCCCCCCcCHHHHHcC
Q 002343 772 DLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 772 dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+++.+||+.+|.+|++..+.+.+
T Consensus 310 ~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 310 EFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp HHHHHHHCCCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCCCcchHHHHHHH
Confidence 99999999999999765554443
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=350.94 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=190.9
Q ss_pred cceEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCChh---HHHHHHHHHHHhCCCCceeEEEEEEe--cCCe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHHD---VALKEIQNLIASDQHPNIVRWYGVES--DQDF 541 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~~---~~~~Ei~~ll~~l~HpNIV~l~g~~~--~~~~ 541 (934)
.+.|.+.+.||+|+||+||++. ..+++.||||++...... ...+|+. +++.++||||+++++++. +.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQ-ILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHH-HHHhcCCCceeEEEEEEecCCCce
Confidence 3679999999999999999986 346889999999765432 2455655 788899999999999887 4667
Q ss_pred EEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||+ ++|.+++ ... ...+++.+++.++.||+.||+
T Consensus 101 ~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~al~ 141 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFL-----------QRH----------------------------RARLDASRLLLYSSQICKGME 141 (327)
T ss_dssp EEEEEECCTTCBHHHHH-----------HHH----------------------------GGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCCCHHHHH-----------Hhc----------------------------ccCCCHHHHHHHHHHHHHHHH
Confidence 999999774 3454444 221 123678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++............
T Consensus 142 ~lH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~-------------------------------- 187 (327)
T 3lxl_A 142 YLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKDYYVVR-------------------------------- 187 (327)
T ss_dssp HHHHTTEECSCCSGGGEEEEETT--EEEECCGGGCEECCTTCSEEECS--------------------------------
T ss_pred HHHhCCccCCCCChhhEEECCCC--CEEEcccccceecccCCccceee--------------------------------
Confidence 99999999999999999997765 49999999998775443221111
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH----------------HHHH-hhcccccc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD----------------ANIV-KDRKDLFL 763 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~----------------~~i~-~~~~~~~~ 763 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| ..||....... ...+ .......+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T 3lxl_A 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY-CDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP 266 (327)
T ss_dssp SCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-TCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCC
T ss_pred ccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhC-CCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCC
Confidence 114689999999999999999999999999999999997 55554332211 1111 12222334
Q ss_pred cCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 764 VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 764 ~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
...++++.+||.+||+.||++|||+.++++|
T Consensus 267 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 267 PACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4567899999999999999999999999754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=373.15 Aligned_cols=248 Identities=23% Similarity=0.297 Sum_probs=194.9
Q ss_pred cceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
...|.+.+.||+|+||+||++... +++.||||++..... +...+|+. +++.++|||||++++++.+.+.+||||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHH-HHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356888999999999999998654 488999999975432 44556665 88889999999999999999999999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.++|... ....+++..++.++.||+.||+|||++|||
T Consensus 298 ~~----------~g~L~~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 340 (495)
T 1opk_A 298 MT----------YGNLLDYLREC---------------------------NRQEVSAVVLLYMATQISSAMEYLEKKNFI 340 (495)
T ss_dssp CT----------TCBHHHHHHHS---------------------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cC----------CCCHHHHHHhc---------------------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 65 44444444321 023467788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+|+.+........ ....+|..
T Consensus 341 HrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~----------------------------------~~~~~~~~ 384 (495)
T 1opk_A 341 HRNLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAH----------------------------------AGAKFPIK 384 (495)
T ss_dssp CSCCSGGGEEECGGG--CEEECCTTCEECCTTCCEECC----------------------------------TTCCCCGG
T ss_pred cCCCChhhEEECCCC--cEEEeecccceeccCCceeec----------------------------------CCCcCCcc
Confidence 999999999996655 599999999987654321110 01346789
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|||++++.+||..... .....+... ....+...++++.+||.+||+.||++||
T Consensus 385 y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 464 (495)
T 1opk_A 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464 (495)
T ss_dssp GCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred eeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCc
Confidence 99999999999999999999999999999966888865432 233333322 2233445678999999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
|+.+|++
T Consensus 465 s~~el~~ 471 (495)
T 1opk_A 465 SFAEIHQ 471 (495)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999975
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=341.44 Aligned_cols=254 Identities=20% Similarity=0.229 Sum_probs=191.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeE-EEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVR-WYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~-l~g~~~~~~~~yLV 545 (934)
..++++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|+|++. +..+..+.+..|+|
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESK-IYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHH-HHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHH-HHHHhhcCCCCCccccccCCCCceEEE
Confidence 45778899999999999999999864 6799999999875443 45566665 666667766554 44455778899999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|.++|.+++... ...+++.+++.++.||+.||+|||++
T Consensus 84 ~e~~~~~L~~~~~~~---------------------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 124 (296)
T 3uzp_A 84 MELLGPSLEDLFNFC---------------------------------------SRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp EECCCCBHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCHHHHHHhh---------------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998877777666311 23467889999999999999999999
Q ss_pred CCcccCCCCCeEEEe---cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLIS---KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl~---~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||+||||||+|||++ .++ .+||+|||+++.+............ ....
T Consensus 125 ~ivH~dlkp~NIl~~~~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~----------------------------~~~~ 174 (296)
T 3uzp_A 125 NFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYR----------------------------ENKN 174 (296)
T ss_dssp TEECSCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCC----------------------------CSCC
T ss_pred CeeeCCCCHHHeEEecCCCCC--eEEEeeCCCcccccccccccccccc----------------------------cccc
Confidence 999999999999995 443 5999999999887654321110000 0112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcc----cccccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRK----DLFLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~----~~~~~~~~~e~~dL 773 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.... .....+..... .......++++.+|
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 253 (296)
T 3uzp_A 175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG-SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY 253 (296)
T ss_dssp CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred cccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhC-CCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHH
Confidence 5699999999999999999999999999999999996 67775421 11111111111 11124567899999
Q ss_pred HHHcccCCCCCCcCHHHHHc
Q 002343 774 FTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~ 793 (934)
|.+||+.||++|||+.++++
T Consensus 254 i~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 254 LNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhcCcCcCCCHHHHHH
Confidence 99999999999999999975
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=349.17 Aligned_cols=265 Identities=21% Similarity=0.294 Sum_probs=194.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
..+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+..+....+||||+++++++.+.+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 456799999999999999999853 3468999999976543 234566664444448999999999987754
Q ss_pred -eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 -~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..|+|||+|.+ +|.+++......... . ...........+++.+++.++.||+.|
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~--------~----------------~~~~~~~~~~~~~~~~~~~~~~qi~~a 160 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVP--------Y----------------KVAPEDLYKDFLTLEHLICYSFQVAKG 160 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEEC--------C-----------------------CTTCEEHHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCCCcHHHHHHhccccccc--------c----------------cccchhhhccccCHHHHHHHHHHHHHH
Confidence 59999997764 566555321110000 0 000000012346788999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 161 l~~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~------------------------------- 207 (316)
T 2xir_A 161 MEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRK------------------------------- 207 (316)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTTCTTSEEE-------------------------------
T ss_pred HHHHHhCCcccccCccceEEECCCC--CEEECCCccccccccCccceec-------------------------------
Confidence 9999999999999999999997655 4999999999876543221110
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHH-hhcccccccCCCHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIV-KDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~-~~~~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||.... ......+ .......+...++++.++|.
T Consensus 208 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 285 (316)
T 2xir_A 208 --GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285 (316)
T ss_dssp --TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred --cCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHH
Confidence 113578999999999999999999999999999999996688886532 2222222 22223334456789999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||.+|||+.++++|
T Consensus 286 ~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 286 DCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCChhhCcCHHHHHHH
Confidence 9999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=344.09 Aligned_cols=254 Identities=20% Similarity=0.226 Sum_probs=184.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEE-EEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRW-YGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l-~g~~~~~~~~yLV 545 (934)
..++++|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..++|+|++.. ..++.+.+..|+|
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESK-IYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHH-HHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHH-HHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 35678899999999999999999854 6789999998754433 34556665 5566666665554 4555778899999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|.++|.+++... ...+++.+++.++.||+.||+|||++
T Consensus 84 ~e~~~~~L~~~~~~~---------------------------------------~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (296)
T 4hgt_A 84 MELLGPSLEDLFNFC---------------------------------------SRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp EECCCCBHHHHHHHT---------------------------------------TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCHHHHHHHh---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 998877777665311 23468889999999999999999999
Q ss_pred CCcccCCCCCeEEE---ecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLI---SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl---~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||+||||||+|||+ +.++ .+||+|||+|+.+............ ....
T Consensus 125 ~ivH~Dlkp~NIl~~~~~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~----------------------------~~~~ 174 (296)
T 4hgt_A 125 NFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYR----------------------------ENKN 174 (296)
T ss_dssp TEECSCCSGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCC----------------------------CSCC
T ss_pred CeecCCCCHHHeeeeccCCCC--eEEEecCccceeccCcccCccCCCC----------------------------cccc
Confidence 99999999999999 4444 4999999999887654322110000 0112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-----hHHHHHHhhcc----cccccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-----ERDANIVKDRK----DLFLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-----~~~~~i~~~~~----~~~~~~~~~e~~dL 773 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.... .....+..... .......++++.+|
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 253 (296)
T 4hgt_A 175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG-SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY 253 (296)
T ss_dssp CCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred cCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcC-CCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHH
Confidence 5699999999999999999999999999999999996 66775421 11111111111 11123457899999
Q ss_pred HHHcccCCCCCCcCHHHHHc
Q 002343 774 FTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~ 793 (934)
|.+||+.||++|||++++++
T Consensus 254 i~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 254 LNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhcCCCCCCCHHHHHH
Confidence 99999999999999999985
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=340.06 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=186.4
Q ss_pred ecceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
..+.|.+.+.||+|+||+||++.... +..||||.+..... +...+|+. +++.++||||+++++++.++ ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHH-HHHHHCCTTBCCEEEEECSS-SC
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHH-HHHhCCCCCcceEEEEEcCC-CC
Confidence 34678899999999999999985443 34699999876532 23445555 67778999999999998754 56
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|+|||+|.+ |+|.+++... ...+++..++.++.||+.||+||
T Consensus 88 ~~v~e~~~~----------~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~~l 129 (281)
T 3cc6_A 88 WIIMELYPY----------GELGHYLERN----------------------------KNSLKVLTLVLYSLQICKAMAYL 129 (281)
T ss_dssp EEEEECCTT----------CBHHHHHHHH----------------------------TTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC----------CCHHHHHHhc----------------------------cccCCHHHHHHHHHHHHHHHHHH
Confidence 899997663 3444433211 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.......... ..
T Consensus 130 H~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~----------------------------------~~ 173 (281)
T 3cc6_A 130 ESINCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKA----------------------------------SV 173 (281)
T ss_dssp HHTTCCCCCCSGGGEEEEETT--EEEECCCCGGGCC-------------------------------------------C
T ss_pred HHCCcccCCCccceEEECCCC--cEEeCccCCCccccccccccc----------------------------------cc
Confidence 999999999999999998765 599999999987654321110 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHH-hhcccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIV-KDRKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..||+.|+|||++.+..++.++|||||||++|+|++++.+||... .......+ .......+...++++.+||.+||+.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 253 (281)
T 3cc6_A 174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDY 253 (281)
T ss_dssp CCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred CCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccC
Confidence 457889999999999999999999999999999998446677533 22222222 2222333445678999999999999
Q ss_pred CCCCCcCHHHHHcC
Q 002343 781 NPDLRPKAQNVLNH 794 (934)
Q Consensus 781 DP~~RPTa~evL~H 794 (934)
||++|||+.+++++
T Consensus 254 ~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 254 DPSDRPRFTELVCS 267 (281)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred CchhCcCHHHHHHH
Confidence 99999999999875
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=354.15 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=186.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcE----EEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRS----VAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~----VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+.||+|+||+||++.. .+++. ||+|.+..... ....+|+. +++.++||||+++++++. ++..|
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML-AIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHH-HHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHH-HHhcCCCCCcCeEEEEEc-CCccE
Confidence 5688899999999999999854 34543 88887753321 23345555 778889999999999986 45689
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||. +|+|.+++... ...+++..++.++.||+.||+|||
T Consensus 91 ~v~e~~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~qi~~~l~~lH 132 (325)
T 3kex_A 91 LVTQYLP----------LGSLLDHVRQH----------------------------RGALGPQLLLNWGVQIAKGMYYLE 132 (325)
T ss_dssp EEEECCT----------TCBSHHHHHSS----------------------------GGGSCTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCC----------CCCHHHHHHHc----------------------------cccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999665 34444443221 123566788999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++. +||+|||+|+.+......... +..
T Consensus 133 ~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~~~~~---------------------------------~~~ 177 (325)
T 3kex_A 133 EHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLY---------------------------------SEA 177 (325)
T ss_dssp HTTCCCSCCSSTTEEESSSSC--EEECSCSGGGGSCCCTTCCC-------------------------------------
T ss_pred hCCCCCCccchheEEECCCCe--EEECCCCcccccCcccccccc---------------------------------cCC
Confidence 999999999999999976654 999999999987554321110 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||..|+|||++.+..++.++|||||||++|+|+++|.+||.... ......+... ....+...++++.+||.+||+.|
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 257 (325)
T 3kex_A 178 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMID 257 (325)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSC
T ss_pred CCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCC
Confidence 588899999999999999999999999999999995577776543 2333333322 23333445678999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||+.++++|
T Consensus 258 p~~Rps~~el~~~ 270 (325)
T 3kex_A 258 ENIRPTFKELANE 270 (325)
T ss_dssp TTTSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999987
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=338.68 Aligned_cols=242 Identities=25% Similarity=0.371 Sum_probs=179.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++. ..|+.||||++..... +...+|+ .+++.++||||+++++++.+++..|+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAF-WIGDEVAVKAARHDPDEDISQTIENVRQEA-KLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEE-ETTEEEEEEEC----------CHHHHHHHH-HHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEE-EcCCeEEEEEEecCCcccHHHHHHHHHHHH-HHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 568889999999999999975 4689999999864322 2334454 478889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.+++. ...+++.+++.++.||+.||+|||++
T Consensus 85 ~e~~~~----------~~L~~~~~------------------------------~~~~~~~~~~~i~~~l~~~l~~lH~~ 124 (271)
T 3dtc_A 85 MEFARG----------GPLNRVLS------------------------------GKRIPPDILVNWAVQIARGMNYLHDE 124 (271)
T ss_dssp EECCTT----------EEHHHHHT------------------------------SSCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEcCCC----------CCHHHHhh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 997753 33333221 24567889999999999999999999
Q ss_pred C---CcccCCCCCeEEEecC------CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 626 G---LIHRDLKPQNVLISKD------KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 626 g---IVHRDLKP~NILl~~d------~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
| |+||||||+|||++.+ ....+||+|||+++........
T Consensus 125 ~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------- 172 (271)
T 3dtc_A 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM-------------------------------- 172 (271)
T ss_dssp SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------------------------------
T ss_pred CCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccccc--------------------------------
Confidence 9 8999999999999752 1345999999999865432110
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhc-ccccccCCCHHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDR-KDLFLVEHIPEAVDL 773 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~-~~~~~~~~~~e~~dL 773 (934)
...||+.|+|||++.+..++.++|||||||++|+|++| .+||....... .... ... ....+...++++.+|
T Consensus 173 -----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (271)
T 3dtc_A 173 -----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG-EVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL 246 (271)
T ss_dssp --------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHC-CCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHH
T ss_pred -----CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHH
Confidence 14589999999999999999999999999999999996 66776543322 2222 111 122334567899999
Q ss_pred HHHcccCCCCCCcCHHHHHcC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~H 794 (934)
|.+||+.||++|||+.|+++|
T Consensus 247 i~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 247 MEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCcccCcCHHHHHHH
Confidence 999999999999999999875
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=348.86 Aligned_cols=264 Identities=22% Similarity=0.324 Sum_probs=194.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEE--------ecCcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVES 537 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~--------~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~ 537 (934)
..+.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. +++.+ +||||+++++++.
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEC
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHH-HHHHhhcCCCEeeEEEEEc
Confidence 456789999999999999999854 3577899999975543 23456665 55555 9999999999999
Q ss_pred cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 538 DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 538 ~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
+.+..|+|||+|.+ +|.+++.. ...... ....+........+++.+++.++.||+
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~-----------~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~qi~ 167 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRA-----------RRPPGM-------------EYSYDINRVPEEQMTFKDLVSCTYQLA 167 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHT-----------TSCTTC-------------CSCC--------CCCHHHHHHHHHHHH
T ss_pred cCCceEEEEECCCCCcHHHHHHH-----------hccccc-------------cccccccccccccCCHHHHHHHHHHHH
Confidence 99999999997754 55555432 110000 000000011234578899999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++||+||||||+|||++.++ .+||+|||+++...........
T Consensus 168 ~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~----------------------------- 216 (334)
T 2pvf_A 168 RGMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKKT----------------------------- 216 (334)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCEECTTTSSEECC-----------------------------
T ss_pred HHHHHHHhCCeeCCCCccceEEEcCCC--CEEEcccccccccccccccccc-----------------------------
Confidence 999999999999999999999997665 4999999999876543221110
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHHHHHhh-cccccccCCCHHHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDANIVKD-RKDLFLVEHIPEAVDLF 774 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~~i~~~-~~~~~~~~~~~e~~dLI 774 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||.... ......+.. .....+...++++.+||
T Consensus 217 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (334)
T 2pvf_A 217 ----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMM 292 (334)
T ss_dssp ----SCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHH
T ss_pred ----CCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHH
Confidence 114578999999999998999999999999999999995677876543 333333322 22333455678999999
Q ss_pred HHcccCCCCCCcCHHHHHcC
Q 002343 775 TRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL~H 794 (934)
.+||+.||.+|||+.+++++
T Consensus 293 ~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 293 RDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHH
Confidence 99999999999999999974
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=356.76 Aligned_cols=252 Identities=15% Similarity=0.183 Sum_probs=190.7
Q ss_pred cceEEEeeeecccCcEEEEEEEEe---------cCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeE-----------
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY---------EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVR----------- 531 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~---------~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~----------- 531 (934)
++.|.+.+.||+|+||+||++... .++.||||++... +...+|+. +++.++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQN-FFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHH-HHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHH-HHHHhcccchhhhhhhhccCCcc
Confidence 578999999999999999998654 3789999998755 34566765 677778999887
Q ss_pred ----EEEEEec-CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHH
Q 002343 532 ----WYGVESD-QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (934)
Q Consensus 532 ----l~g~~~~-~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 606 (934)
+++++.. ++..|+|||||.++|.+++... ....+++.
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~--------------------------------------~~~~l~~~ 159 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVS--------------------------------------PKHVLSER 159 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHS--------------------------------------GGGCCCHH
T ss_pred CccchhhccccCCcEEEEEecCCCcCHHHHHHhC--------------------------------------CcCCCCHH
Confidence 6777765 7899999998866776665310 02457888
Q ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhh
Q 002343 607 QLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKL 686 (934)
Q Consensus 607 ~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (934)
+++.++.||+.||+|||++||+||||||+|||++.++...+||+|||+|+.+............
T Consensus 160 ~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~---------------- 223 (352)
T 2jii_A 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEG---------------- 223 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTT----------------
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccc----------------
Confidence 9999999999999999999999999999999998765346999999999877643322111000
Q ss_pred hhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch---hHHHHHH---hhccc
Q 002343 687 VICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF---ERDANIV---KDRKD 760 (934)
Q Consensus 687 ~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~---~~~~~i~---~~~~~ 760 (934)
......||+.|+|||++.+..++.++|||||||++|||++| ..||.... ....... .....
T Consensus 224 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T 2jii_A 224 ------------SRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG-FLPWTNCLPNTEDIMKQKQKFVDKPG 290 (352)
T ss_dssp ------------SSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-CCTTGGGTTCHHHHHHHHHHHHHSCC
T ss_pred ------------ccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC-CCCcccCCcCHHHHHHHHHhccCChh
Confidence 01124799999999999999999999999999999999996 67776532 1111111 11111
Q ss_pred ccc------cCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 761 LFL------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 761 ~~~------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
... ...++++.+||.+||+.||++|||++++++
T Consensus 291 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 291 PFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp CEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred hhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 111 234789999999999999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=360.42 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=191.4
Q ss_pred eecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
...+.|.+.+.||+|+||+||++...+|+.||||++..... ....+|+. +++.++||||+++++++.+.+..|+|
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv 105 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLV 105 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHH-GGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred HHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHH-HHHhccCCCccceEEEEecCCceEEE
Confidence 45567888899999999999998777899999999875432 24456665 77889999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.+ |+|.+++..... ....+++..++.++.||+.||+|||++
T Consensus 106 ~e~~~~----------~~L~~~l~~~~~-------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~ 150 (326)
T 3uim_A 106 YPYMAN----------GSVASCLRERPE-------------------------SQPPLDWPKRQRIALGSARGLAYLHDH 150 (326)
T ss_dssp EECCTT----------CBHHHHHHCCST-------------------------TCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEeccC----------CCHHHHHHhccc-------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 996653 344444332110 123478889999999999999999999
Q ss_pred ---CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 ---GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 ---gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
||+||||||+|||++.++ .+||+|||+|+.......... ..
T Consensus 151 ~~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~----------------------------------~~ 194 (326)
T 3uim_A 151 CDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDTHVT----------------------------------TA 194 (326)
T ss_dssp SSSCEECCCCSGGGEEECTTC--CEEECCCSSCEECCSSSSCEE----------------------------------CC
T ss_pred CCCCeEeCCCchhhEEECCCC--CEEeccCccccccCccccccc----------------------------------cc
Confidence 999999999999997665 499999999987654322111 12
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch------hHHHHHHhhcc--------------ccc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF------ERDANIVKDRK--------------DLF 762 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~------~~~~~i~~~~~--------------~~~ 762 (934)
..||+.|+|||++.+..++.++|||||||++|+|++| .+||.... ......+.... ...
T Consensus 195 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 3uim_A 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG-QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNY 273 (326)
T ss_dssp CCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHC-CCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSC
T ss_pred ccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhC-CCcccccccccccchhHHHHHHHHhhchhhhhhcChhhcccc
Confidence 4599999999999999999999999999999999996 77774211 00111111100 000
Q ss_pred ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCC
Q 002343 763 LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 763 ~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HP 795 (934)
....++++.+|+.+||+.||++|||+.++++|-
T Consensus 274 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 111235789999999999999999999999875
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=360.38 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=181.3
Q ss_pred ceEEEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDFVY 543 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~y 543 (934)
..|.+.+.||+|+||+||++...+ +..||||.+..... +...+|+. +++.++|||||++++++.+ ++..|
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHT-TSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCCCCeE
Confidence 357788999999999999985532 24699999865432 23445554 7788899999999998654 56889
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++... ...+++.+++.++.||+.||+|||
T Consensus 168 lv~e~~~~----------g~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~LH 209 (373)
T 3c1x_A 168 VVLPYMKH----------GDLRNFIRNE----------------------------THNPTVKDLIGFGLQVAKGMKFLA 209 (373)
T ss_dssp EEEECCTT----------CBHHHHHHCT----------------------------TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCC----------CCHHHHHhhc----------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99996653 4444444321 233567788999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+|+.+.......... .+..
T Consensus 210 ~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~~-------------------------------~~~~ 256 (373)
T 3c1x_A 210 SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHN-------------------------------KTGA 256 (373)
T ss_dssp HTTCCCSCCCGGGEEECTTC--CEEECCC---------------------------------------------------
T ss_pred HCCEecCccchheEEECCCC--CEEEeeccccccccccccccccc-------------------------------cCCC
Confidence 99999999999999997655 49999999998765432111100 0114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||+.|+|||++.+..++.++|||||||++|||++|+.+||...... ...+........+...++++.+||.+||+.|
T Consensus 257 ~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~d 336 (373)
T 3c1x_A 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 336 (373)
T ss_dssp -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 57889999999999999999999999999999999889998754322 2233333333344556789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||+.+++++
T Consensus 337 p~~RPs~~ell~~ 349 (373)
T 3c1x_A 337 AEMRPSFSELVSR 349 (373)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999864
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=342.22 Aligned_cols=245 Identities=25% Similarity=0.350 Sum_probs=187.0
Q ss_pred ceEEEee-eecccCcEEEEEEEE---ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 473 KLVVFNK-EIAKGSNGTVVLEGN---YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 473 ~~~~~~~-~IG~GsfGtVy~~~~---~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+.|.+.+ .||+|+||+||++.. ..++.||||++..... +...+|+. +++.++||||+++++++ ..+..|
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHH-HHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCEEEEEEEE-CCCCcE
Confidence 5677777 999999999999843 2468999999875432 23445554 78889999999999999 567789
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||+|.+ +|.+++ .. ...+++.+++.++.||+.||+||
T Consensus 94 lv~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~L 133 (291)
T 1xbb_A 94 LVMEMAELGPLNKYL-----------QQ-----------------------------NRHVKDKNIIELVHQVSMGMKYL 133 (291)
T ss_dssp EEEECCTTEEHHHHH-----------HH-----------------------------CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHH-----------Hh-----------------------------CcCCCHHHHHHHHHHHHHHHHHH
Confidence 99997763 454444 21 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.+.......... ..
T Consensus 134 H~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~--------------------------------~~ 179 (291)
T 1xbb_A 134 EESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQ--------------------------------TH 179 (291)
T ss_dssp HHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC-----------------------------------
T ss_pred HhCCeEcCCCCcceEEEeCCC--cEEEccCCcceeeccCCCccccc--------------------------------cc
Confidence 999999999999999998765 59999999998775543221111 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHh-hcccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVK-DRKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..||+.|+|||++.+..++.++|||||||++|+|++++.+||....... ...+. ......+...++++.+||.+||+.
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 259 (291)
T 1xbb_A 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 259 (291)
T ss_dssp -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred CCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 3578899999999998999999999999999999995577876543332 22222 222333455678999999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
||++||++.++++
T Consensus 260 dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 260 DVENRPGFAAVEL 272 (291)
T ss_dssp STTTSCCHHHHHH
T ss_pred ChhhCcCHHHHHH
Confidence 9999999999985
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=351.46 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=184.3
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHH-HhCCCCceeEEEEEEecC----CeEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLI-ASDQHPNIVRWYGVESDQ----DFVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll-~~l~HpNIV~l~g~~~~~----~~~y 543 (934)
..+.+.|.+.+.||+|+||+||++. ..|+.||||++.........+|...+. ..++||||+++++++.+. ...|
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGK-WRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEE-ETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccccceEEEeEeecCCCeEEEEEE-ECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 4566789999999999999999964 459999999997665555555554222 234899999999999887 7899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++. ...+++.+++.++.||+.||+|||
T Consensus 112 lv~e~~~~----------g~L~~~l~------------------------------~~~~~~~~~~~i~~~i~~~l~~lH 151 (337)
T 3mdy_A 112 LITDYHEN----------GSLYDYLK------------------------------STTLDAKSMLKLAYSSVSGLCHLH 151 (337)
T ss_dssp EEECCCTT----------CBHHHHHH------------------------------HCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCC----------CcHHHHhh------------------------------ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997654 34444332 234678889999999999999999
Q ss_pred HC--------CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 624 EI--------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 624 s~--------gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
++ |||||||||+|||++.++ .+||+|||+|+.+..........
T Consensus 152 ~~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~~~~--------------------------- 202 (337)
T 3mdy_A 152 TEIFSTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVKFISDTNEVDIP--------------------------- 202 (337)
T ss_dssp SCBCSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCEECC------------------------------------
T ss_pred HhhhhhccCCCEEecccchHHEEECCCC--CEEEEeCCCceeeccccccccCC---------------------------
Confidence 98 999999999999997665 49999999998765433211100
Q ss_pred ccceeecCCCCCccccchhcccCCCccc------ccccchhhhhHHhhcCC---------CCCCCCc------hhHHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRA------IDLFSLGCILFFCITGG---------KHPYGES------FERDANI 754 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~k------sDIWSLGvILyeLltGg---------~~Pf~~~------~~~~~~i 754 (934)
....+||+.|+|||++.+..++.+ +|||||||++|||++|. ..||... .......
T Consensus 203 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 278 (337)
T 3mdy_A 203 ----PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREI 278 (337)
T ss_dssp ----CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred ----CCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHH
Confidence 012469999999999988766554 99999999999999972 4455432 1111122
Q ss_pred Hhhc--ccccc-----cCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 755 VKDR--KDLFL-----VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 755 ~~~~--~~~~~-----~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
.... ....+ ...++++.+||.+||+.||++|||+.++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 279 VCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 2111 11111 1234579999999999999999999999975
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-38 Score=346.03 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=187.6
Q ss_pred ceEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD--QDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~ 541 (934)
+.|.+.+.||+|+||+||++. ..+++.||||++..... +...+|+. +++.++||||+++++++.+ ...
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEID-ILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHH-HHHhCCCcchhhEEEEEecCCCce
Confidence 345889999999999998753 23688999999976543 23455655 7888999999999999987 468
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|+|||+|.+ |+|.+++. ..++++.+++.++.||+.||+|
T Consensus 110 ~~lv~e~~~~----------~~L~~~l~------------------------------~~~~~~~~~~~i~~~l~~~l~~ 149 (318)
T 3lxp_A 110 LQLVMEYVPL----------GSLRDYLP------------------------------RHSIGLAQLLLFAQQICEGMAY 149 (318)
T ss_dssp EEEEECCCTT----------CBHHHHGG------------------------------GSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccC----------CcHHHHHh------------------------------hCCCCHHHHHHHHHHHHHHHHH
Confidence 9999997653 34433332 2346788899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++ .+||+|||+++............ .
T Consensus 150 LH~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~--------------------------------~ 195 (318)
T 3lxp_A 150 LHAQHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEYYRVR--------------------------------E 195 (318)
T ss_dssp HHHTTEECSCCSGGGEEECTTC--CEEECCGGGCEECCTTCSEEEC----------------------------------
T ss_pred HHhCCccCCCCchheEEEcCCC--CEEECCccccccccccccccccc--------------------------------c
Confidence 9999999999999999997665 49999999998876543211111 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH----------------HHHHh-hccccccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD----------------ANIVK-DRKDLFLV 764 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~----------------~~i~~-~~~~~~~~ 764 (934)
...||+.|+|||++.+..++.++|||||||++|+|++| ..||....... ...+. ......+.
T Consensus 196 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (318)
T 3lxp_A 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH-CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD 274 (318)
T ss_dssp -CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT-TCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCT
T ss_pred CCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhC-CCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCc
Confidence 14588999999999999999999999999999999996 66665432221 11111 12222344
Q ss_pred CCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 765 EHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 765 ~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
..++++.+||.+||+.||++|||+.++++
T Consensus 275 ~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 275 KCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 56789999999999999999999999984
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=346.68 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=187.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEEec-----CcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~~-----g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
...+.|.+.+.||+|+||+||++.... +..||||++...... ...+|+. +++.++||||+++++++.+.+
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG-IMGQFSHHNIIRLEGVISKYK 119 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECSSS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEecCC
Confidence 344678889999999999999985442 346999999754332 2345554 788999999999999999999
Q ss_pred eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..|||||+|.+ +|.+++ ... ...+++.+++.++.||+.||
T Consensus 120 ~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~aL 160 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFL-----------REK----------------------------DGEFSVLQLVGMLRGIAAGM 160 (333)
T ss_dssp SEEEEEECCTTEEHHHHH-----------HHT----------------------------TTCSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCcHHHHH-----------HhC----------------------------CCCCCHHHHHHHHHHHHHHH
Confidence 99999997764 555444 211 23467888999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 161 ~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~-------------------------------- 206 (333)
T 1mqb_A 161 KYLANMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYT-------------------------------- 206 (333)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTC--CEEECCCCC---------------------------------------------
T ss_pred HHHHhCCeeCCCCChheEEECCCC--cEEECCCCcchhhccccccccc--------------------------------
Confidence 999999999999999999997665 4999999999876543211100
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~ 777 (934)
.....||+.|+|||++.+..++.++|||||||++|||++++.+||..... .....+... ....+...++++.+||.+|
T Consensus 207 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 286 (333)
T 1mqb_A 207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 286 (333)
T ss_dssp ----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHH
T ss_pred cCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHH
Confidence 01135788999999999999999999999999999999955777765433 222222222 2233445678999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||++||++.+++++
T Consensus 287 l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 287 WQQERARRPKFADIVSI 303 (333)
T ss_dssp TCSSTTTSCCHHHHHHH
T ss_pred cCCChhhCcCHHHHHHH
Confidence 99999999999999864
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=349.91 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=184.0
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcE----EEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRS----VAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~----VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
.+.|.+.+.||+|+||+||++.. .+++. ||+|.+.... .....+|+. +++.++||||+++++++.+.. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHH-HHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHH-HHHhCCCCCeeEEEEEEecCC-c
Confidence 46689999999999999999854 34544 5777764332 234556665 788999999999999998865 7
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
++|+|+|. +|+|.+++... ...+++.+++.++.||+.||+||
T Consensus 92 ~~v~~~~~----------~g~L~~~l~~~----------------------------~~~~~~~~~~~i~~qi~~aL~~L 133 (327)
T 3lzb_A 92 QLITQLMP----------FGCLLDYVREH----------------------------KDNIGSQYLLNWCVQIAKGMNYL 133 (327)
T ss_dssp EEEECCCS----------SCBHHHHHHHT----------------------------TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecC----------CCcHHHHHHhc----------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence 78888544 45555544321 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+|+.+......... ..
T Consensus 134 H~~~ivH~Dikp~NIl~~~~~--~~kL~DfG~a~~~~~~~~~~~~---------------------------------~~ 178 (327)
T 3lzb_A 134 EDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHA---------------------------------EG 178 (327)
T ss_dssp HHTTCCCSCCCGGGEEEEETT--EEEECCTTC------------------------------------------------
T ss_pred hhCCCcCCCCCHHHEEEcCCC--CEEEccCcceeEccCccccccc---------------------------------cC
Confidence 999999999999999997765 4999999999876543221110 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhh-cccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..||+.|+|||++.+..++.++|||||||++|||++++.+||...... ....+.. .....+...++++.+||.+||+.
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 258 (327)
T 3lzb_A 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 258 (327)
T ss_dssp -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCS
T ss_pred CCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCC
Confidence 457889999999999999999999999999999999668888764333 2333332 22333445678999999999999
Q ss_pred CCCCCcCHHHHHcC
Q 002343 781 NPDLRPKAQNVLNH 794 (934)
Q Consensus 781 DP~~RPTa~evL~H 794 (934)
||.+||++.|+++.
T Consensus 259 dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 259 DADSRPKFRELIIE 272 (327)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhHCcCHHHHHHH
Confidence 99999999999863
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=349.78 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=194.3
Q ss_pred ecceEEEeeeecccCcEEEEEEEEec------CcEEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYE------GRSVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQ 539 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~------g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~ 539 (934)
..+.|.+.+.||+|+||+||++.... ++.||||.+..... +...+|+. ++..+ +||||+++++++.+.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK-IMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHH-HHHhhcCCCCeeeEEEEEecC
Confidence 44678999999999999999985432 35899999976532 23456665 56666 899999999999999
Q ss_pred CeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 540 ~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
+..|+|||+|.+ +|.+++.. ...... . .....+....+++.+++.++.||+.|
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~--------------~-~~~~~~~~~~~~~~~~~~~~~qi~~~ 176 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRR-----------KSRVLE--------------T-DPAFAIANSTASTRDLLHFSSQVAQG 176 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHH-----------HHHHHS--------------C-C-------CCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCcHHHHHHH-----------hccccc--------------c-cccccccccccCHHHHHHHHHHHHHH
Confidence 999999997764 56555532 110000 0 00000113457889999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++.+.........
T Consensus 177 l~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~------------------------------- 223 (333)
T 2i1m_A 177 MAFLASKNCIHRDVAARNVLLTNGH--VAKIGDFGLARDIMNDSNYIVK------------------------------- 223 (333)
T ss_dssp HHHHHHTTEECSCCSGGGCEEEGGG--EEEBCCCGGGCCGGGCTTSEEC-------------------------------
T ss_pred HHHHhcCCcccCCcccceEEECCCC--eEEECccccccccccccceeec-------------------------------
Confidence 9999999999999999999997665 5999999999876543221110
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhc-ccccccCCCHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDR-KDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~-~~~~~~~~~~e~~dLI~ 775 (934)
....||+.|+|||++.+..++.++|||||||++|+|++++.+||..... ......... ....+...++++.+||.
T Consensus 224 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 301 (333)
T 2i1m_A 224 --GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 301 (333)
T ss_dssp --SSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred --CCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 1134788999999999999999999999999999999967888865422 222333322 22233445789999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||.+|||+.+++++
T Consensus 302 ~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 302 ACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHhccChhhCcCHHHHHHH
Confidence 9999999999999999863
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-38 Score=339.39 Aligned_cols=243 Identities=23% Similarity=0.379 Sum_probs=186.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----------hHHHHHHHHHHHhCCCCceeEEEEEEec
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----------DVALKEIQNLIASDQHPNIVRWYGVESD 538 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~ 538 (934)
...+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. +++.++||||+++++++.+
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF-IMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHH-HHTTCCCTTBCCEEEEETT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHH-HHHhCCCCCchhhheeecC
Confidence 3456789999999999999999855 5789999999864322 23445655 7888999999999999987
Q ss_pred CCeEEEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 539 ~~~~yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
.. ++|||||. ++|.+++ .. ....+++..++.++.||+.
T Consensus 95 ~~--~lv~e~~~~~~L~~~l-----------~~----------------------------~~~~~~~~~~~~~~~~l~~ 133 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRL-----------LD----------------------------KAHPIKWSVKLRLMLDIAL 133 (287)
T ss_dssp TT--EEEEECCTTCBHHHHH-----------HC----------------------------TTSCCCHHHHHHHHHHHHH
T ss_pred CC--eEEEEecCCCCHHHHH-----------hc----------------------------ccCCccHHHHHHHHHHHHH
Confidence 66 69999776 3444433 21 1235688899999999999
Q ss_pred HHHHHHHCC--CcccCCCCCeEEEecCC---CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccc
Q 002343 618 GLSHLHEIG--LIHRDLKPQNVLISKDK---SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECV 692 (934)
Q Consensus 618 gL~yLHs~g--IVHRDLKP~NILl~~d~---~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (934)
||+|||++| |+||||||+|||++.++ ...+||+|||+|+......
T Consensus 134 ~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 183 (287)
T 4f0f_A 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV------------------------------ 183 (287)
T ss_dssp HHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCE------------------------------
T ss_pred HHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccc------------------------------
Confidence 999999999 99999999999997543 2358999999997533211
Q ss_pred cccccceeecCCCCCccccchhcc--cCCCcccccccchhhhhHHhhcCCCCCCCCchhHH---HHHH-h-hcccccccC
Q 002343 693 FQFGVLFFTVGYGSSGWQAPEQLL--QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD---ANIV-K-DRKDLFLVE 765 (934)
Q Consensus 693 ~~~g~~~~t~~~GT~~Y~APE~l~--~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~---~~i~-~-~~~~~~~~~ 765 (934)
....||+.|+|||++. ...++.++|||||||++|+|++| .+||....... .... . ......+..
T Consensus 184 --------~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 4f0f_A 184 --------SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG-EGPFDEYSYGKIKFINMIREEGLRPTIPED 254 (287)
T ss_dssp --------ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHS-SCTTTTCCCCHHHHHHHHHHSCCCCCCCTT
T ss_pred --------cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcC-CCCCccccccHHHHHHHHhccCCCCCCCcc
Confidence 1146999999999984 45578999999999999999996 77776432221 1111 1 122233445
Q ss_pred CCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 766 HIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 766 ~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
.++++.+||.+||+.||++|||+.++++
T Consensus 255 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 255 CPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6789999999999999999999999985
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=344.20 Aligned_cols=242 Identities=26% Similarity=0.410 Sum_probs=181.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+.|.+.+.||+|+||+||++. ..++.||||++...... ...+|+. +++.++||||+++++++.+ ..|+|||||.+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~ 83 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAK-WRAKDVAIKQIESESERKAFIVELR-QLSRVNHPNIVKLYGACLN--PVCLVMEYAEG 83 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEE-ETTEEEEEEECSSTTHHHHHHHHHH-HHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred hHeeeeeEeecCCCceEEEEE-ECCeeEEEEEecChhHHHHHHHHHH-HHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence 568889999999999999964 46889999999765443 3455655 7888999999999998874 47999997653
Q ss_pred ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH---CCCc
Q 002343 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE---IGLI 628 (934)
Q Consensus 552 sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs---~gIV 628 (934)
|+|.+++..... ...++...++.++.||+.||+|||+ +||+
T Consensus 84 ----------~~L~~~l~~~~~--------------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~iv 127 (307)
T 2eva_A 84 ----------GSLYNVLHGAEP--------------------------LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127 (307)
T ss_dssp ----------CBHHHHHHCSSS--------------------------EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCC
T ss_pred ----------CCHHHHHhccCC--------------------------CCccCHHHHHHHHHHHHHHHHHHHhCCCCCee
Confidence 344444332110 1235677889999999999999999 8999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. .+||+|||+++...... +...||+.
T Consensus 128 H~dlkp~NIll~~~~~-~~kl~Dfg~~~~~~~~~--------------------------------------~~~~gt~~ 168 (307)
T 2eva_A 128 HRDLKPPNLLLVAGGT-VLKICDFGTACDIQTHM--------------------------------------TNNKGSAA 168 (307)
T ss_dssp CCCCSGGGEEEETTTT-EEEECCCCC--------------------------------------------------CCTT
T ss_pred cCCCChhHEEEeCCCC-EEEEccccccccccccc--------------------------------------ccCCCCCc
Confidence 9999999999987654 48999999997553211 01358999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH---HH-HHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER---DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~---~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+|||++.+..++.++|||||||++|||++| .+||...... .. ..............++++.+||.+||+.||++
T Consensus 169 y~aPE~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 247 (307)
T 2eva_A 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQ 247 (307)
T ss_dssp SSCHHHHTCCCCCTHHHHHHHHHHHHHHHHT-CCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGG
T ss_pred eEChhhhCCCCCCcHHHHHHHHHHHHHHHHC-CCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhh
Confidence 9999999999999999999999999999996 6777643211 11 22222333334556789999999999999999
Q ss_pred CcCHHHHHcC
Q 002343 785 RPKAQNVLNH 794 (934)
Q Consensus 785 RPTa~evL~H 794 (934)
|||+++++++
T Consensus 248 Rps~~ell~~ 257 (307)
T 2eva_A 248 RPSMEEIVKI 257 (307)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999873
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=371.77 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=194.1
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
..+.|.+.+.||+|+||+||++....+..||||++..... +...+|+. +++.++|||||++++++.+ +..||||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHH-HHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 3466888999999999999998777778899999975432 44566665 8889999999999999876 678999996
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|. +|+|.++|... ....+++.+++.++.||+.||+|||++|||
T Consensus 343 ~~----------~gsL~~~l~~~---------------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv 385 (535)
T 2h8h_A 343 MS----------KGSLLDFLKGE---------------------------TGKYLRLPQLVDMAAQIASGMAYVERMNYV 385 (535)
T ss_dssp CT----------TEEHHHHHSHH---------------------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hc----------CCcHHHHHhhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 65 34444444321 023467888999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++.+........ ....||..
T Consensus 386 HrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~~~----------------------------------~~~~~~~~ 429 (535)
T 2h8h_A 386 HRDLRAANILVGENL--VCKVADFGLARLIEDNEYTAR----------------------------------QGAKFPIK 429 (535)
T ss_dssp CSCCSGGGEEECGGG--CEEECCTTSTTTCCCHHHHTT----------------------------------CSTTSCGG
T ss_pred CCCCCHhhEEEcCCC--cEEEcccccceecCCCceecc----------------------------------cCCcCccc
Confidence 999999999996654 599999999987643211000 01347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||+||||++++..||...... ....+... ....+...++++.+||.+||+.||++||
T Consensus 430 y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 509 (535)
T 2h8h_A 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP 509 (535)
T ss_dssp GSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred ccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCc
Confidence 999999999999999999999999999999668888764332 22333222 2223445678999999999999999999
Q ss_pred CHHHHHcC
Q 002343 787 KAQNVLNH 794 (934)
Q Consensus 787 Ta~evL~H 794 (934)
|+++|++.
T Consensus 510 t~~~l~~~ 517 (535)
T 2h8h_A 510 TFEYLQAF 517 (535)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-38 Score=346.79 Aligned_cols=260 Identities=22% Similarity=0.278 Sum_probs=175.5
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEe--------c
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVES--------D 538 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~--------~ 538 (934)
.+.+|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+..+....+||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 346799999999999999999854 4789999999865543 234566664444446999999999983 4
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
....|+|||+|.++|.+++... .....+++.+++.++.||+.|
T Consensus 106 ~~~~~lv~e~~~g~L~~~l~~~-------------------------------------~~~~~~~~~~~~~i~~qi~~~ 148 (337)
T 3ll6_A 106 QAEFLLLTELCKGQLVEFLKKM-------------------------------------ESRGPLSCDTVLKIFYQTCRA 148 (337)
T ss_dssp SEEEEEEEECCSEEHHHHHHHH-------------------------------------HTTCSCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEecCCCHHHHHHHh-------------------------------------hccCCCCHHHHHHHHHHHHHH
Confidence 4569999999988877766310 013457889999999999999
Q ss_pred HHHHHHCC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 619 LSHLHEIG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 619 L~yLHs~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
|+|||++| |+||||||+|||++.++ .+||+|||+++.+.............. .
T Consensus 149 l~~LH~~~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~-----------------------~ 203 (337)
T 3ll6_A 149 VQHMHRQKPPIIHRDLKVENLLLSNQG--TIKLCDFGSATTISHYPDYSWSAQRRA-----------------------L 203 (337)
T ss_dssp HHHHHTSSSCCBCCCCCGGGCEECTTS--CEEBCCCTTCBCCSSCC----------------------------------
T ss_pred HHHHHhCCCCEEEccCCcccEEECCCC--CEEEecCccceeccccCcccccccccc-----------------------c
Confidence 99999999 99999999999997665 499999999987765332110000000 0
Q ss_pred cceeecCCCCCccccchhc---ccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcc-cccccCCCHHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQL---LQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRK-DLFLVEHIPEAVD 772 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l---~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~-~~~~~~~~~e~~d 772 (934)
........||+.|+|||++ .+..++.++|||||||++|+|++| .+||...... .+..... .......++++.+
T Consensus 204 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 280 (337)
T 3ll6_A 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR-QHPFEDGAKL--RIVNGKYSIPPHDTQYTVFHS 280 (337)
T ss_dssp --------------------CCTTSCSSHHHHHHHHHHHHHHHHHS-SCCC--------------CCCCTTCCSSGGGHH
T ss_pred chhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC-CCCCcchhHH--HhhcCcccCCcccccchHHHH
Confidence 0000124699999999998 566789999999999999999996 6777543222 1121111 1222334567999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCC
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHP 795 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HP 795 (934)
||.+||+.||++|||+.|+++|-
T Consensus 281 li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 281 LIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHH
Confidence 99999999999999999999873
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=336.94 Aligned_cols=242 Identities=26% Similarity=0.363 Sum_probs=183.8
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChh-HHHHHHHHHHHhCCCCceeEEEEEEecC-CeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-VALKEIQNLIASDQHPNIVRWYGVESDQ-DFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~-~~~~Ei~~ll~~l~HpNIV~l~g~~~~~-~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||+||++. .+|+.||||++...... ...+|+. +++.++||||+++++++.+. +..|+|||+|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~vavK~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKNDATAQAFLAEAS-VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEE-ETTEEEEEEECCCCC--HHHHHTHH-HHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEE-EcCCEEEEEEecchhHHHHHHHHHH-HHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 4678999999999999999964 46899999999765443 3455555 78889999999999987654 5799999977
Q ss_pred cC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 550 TC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 550 ~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
.+ +|.+++. ... ...+++.+++.++.||+.||+|||++||+
T Consensus 98 ~~~~L~~~l~-----------~~~---------------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 139 (278)
T 1byg_A 98 AKGSLVDYLR-----------SRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139 (278)
T ss_dssp TTEEHHHHHH-----------HHH---------------------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHH-----------hcc---------------------------cccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 64 5555542 110 11256778999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++ .+||+|||+++....... ...||+.
T Consensus 140 H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~--------------------------------------~~~~~~~ 179 (278)
T 1byg_A 140 HRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQD--------------------------------------TGKLPVK 179 (278)
T ss_dssp CSCCSGGGEEECTTS--CEEECCCCC--------------------------------------------------CCTT
T ss_pred ccCCCcceEEEeCCC--cEEEeecccccccccccc--------------------------------------CCCcccc
Confidence 999999999997665 499999999875433210 1347889
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCc
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRP 786 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RP 786 (934)
|+|||++.+..++.++|||||||++|+|++++.+||...... ....+ .......+...++++.+||.+||+.||++||
T Consensus 180 y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 259 (278)
T 1byg_A 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRP 259 (278)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred ccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCC
Confidence 999999999999999999999999999999567888654332 22222 2222333455678999999999999999999
Q ss_pred CHHHHHc
Q 002343 787 KAQNVLN 793 (934)
Q Consensus 787 Ta~evL~ 793 (934)
|+.++++
T Consensus 260 s~~~l~~ 266 (278)
T 1byg_A 260 SFLQLRE 266 (278)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999985
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=349.35 Aligned_cols=250 Identities=21% Similarity=0.260 Sum_probs=178.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHH-HHHhCCCCceeEEEEEEec-----CCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-LIASDQHPNIVRWYGVESD-----QDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~-ll~~l~HpNIV~l~g~~~~-----~~~~yLVm 546 (934)
+.|.+.+.||+|+||+||++ ..+++.||||++..........|... .+..++||||+++++.+.. ...+|+||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~-~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKG-SLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEE-EETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred HHhheeeecccCCCeEEEEE-EECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 56888999999999999997 45899999999976554444444331 2345899999999985542 34689999
Q ss_pred ecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 547 ERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 547 E~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
|||++ +|.+++ . ....++..++.++.||+.||+|||++
T Consensus 92 e~~~~g~L~~~l-----------~------------------------------~~~~~~~~~~~i~~qi~~~L~~LH~~ 130 (336)
T 3g2f_A 92 EYYPNGSLXKYL-----------S------------------------------LHTSDWVSSCRLAHSVTRGLAYLHTE 130 (336)
T ss_dssp CCCTTCBHHHHH-----------H------------------------------HCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCCCCcHHHHH-----------h------------------------------hcccchhHHHHHHHHHHHHHHHHHhh
Confidence 97753 454444 2 12336677889999999999999999
Q ss_pred ---------CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 626 ---------GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 626 ---------gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
|||||||||+|||++.++ .+||+|||+|+.+............
T Consensus 131 ~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kL~DFG~a~~~~~~~~~~~~~~~-------------------------- 182 (336)
T 3g2f_A 131 LPRGDHYKPAISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEED-------------------------- 182 (336)
T ss_dssp BCCGGGCBCCEECSSCSGGGEEECTTS--CEEECCCTTCEECSSSSCC--------------------------------
T ss_pred hccccccccceeecccccceEEEcCCC--cEEEeeccceeecccccccCccccc--------------------------
Confidence 999999999999997665 4999999999887654321110000
Q ss_pred cceeecCCCCCccccchhccc-------CCCcccccccchhhhhHHhhcCCCCCCCCchh------------------HH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQ-------GRQTRAIDLFSLGCILFFCITGGKHPYGESFE------------------RD 751 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~-------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~------------------~~ 751 (934)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.+||..... ..
T Consensus 183 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (336)
T 3g2f_A 183 -NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDM 261 (336)
T ss_dssp ----CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred -cccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHH
Confidence 00112569999999999987 45678999999999999999987776643211 00
Q ss_pred HHHHhhc--ccccccC------CCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 752 ANIVKDR--KDLFLVE------HIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 752 ~~i~~~~--~~~~~~~------~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
....... ....+.. .++++.+||.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 262 QVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence 1111111 1111111 1247999999999999999999999964
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=373.58 Aligned_cols=242 Identities=25% Similarity=0.344 Sum_probs=183.5
Q ss_pred eeeecccCcEEEEEEEEe---cCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 478 NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
...||+|+||+||++... ++..||||++.... .+...+|+. +++.++|||||++++++.+ +.+|||||||.
T Consensus 341 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~-il~~l~hpniv~l~~~~~~-~~~~lv~E~~~ 418 (613)
T 2ozo_A 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 418 (613)
T ss_dssp EEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHH-HHTTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHH-HHHhCCCCCEeeEEEEecc-CCeEEEEEeCC
Confidence 348999999999998543 45689999997532 234566665 7889999999999999987 56999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.++|... ...+++.+++.++.||+.||+|||++|||||
T Consensus 419 ----------~g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHr 460 (613)
T 2ozo_A 419 ----------GGPLHKFLVGK----------------------------REEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460 (613)
T ss_dssp ----------TCBHHHHHTTC----------------------------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ----------CCcHHHHHhhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcC
Confidence 44554444321 2346788999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+|+.+.......... ....||+.|+
T Consensus 461 Dlkp~NILl~~~~--~vkL~DFGla~~~~~~~~~~~~~--------------------------------~~~~~~~~y~ 506 (613)
T 2ozo_A 461 NLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTAR--------------------------------SAGKWPLKWY 506 (613)
T ss_dssp CCSGGGEEEEETT--EEEECCCSTTTTCC----------------------------------------------CCTTS
T ss_pred cCCHHHEEEcCCC--cEEEeeccCcccccCCCceeeec--------------------------------cCCCCcccee
Confidence 9999999997665 59999999998765432211110 0134678999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||+||||++.|.+||..... .....+ .......+...++++.+||.+||+.||++||++
T Consensus 507 APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~ 586 (613)
T 2ozo_A 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDF 586 (613)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCH
T ss_pred CHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence 999999999999999999999999999955788865433 222223 333333445577899999999999999999999
Q ss_pred HHHHc
Q 002343 789 QNVLN 793 (934)
Q Consensus 789 ~evL~ 793 (934)
.+|++
T Consensus 587 ~~l~~ 591 (613)
T 2ozo_A 587 LTVEQ 591 (613)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=332.56 Aligned_cols=238 Identities=18% Similarity=0.280 Sum_probs=183.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~--~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. +++.||||++..... +...+|+. +++.++||||+++++++.+. +..|+|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP-RLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGG-GGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHH-HHHhcCCCchhheEEEEccCCCCCeEee
Confidence 5678889999999999999654 689999999975432 23345554 77888999999999999887 789999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||.+ +|.+++ ... ....+++.+++.++.||+.||+|||+
T Consensus 88 ~e~~~~~~L~~~l-----------~~~---------------------------~~~~~~~~~~~~i~~qi~~~l~~lH~ 129 (271)
T 3kmu_A 88 THWMPYGSLYNVL-----------HEG---------------------------TNFVVDQSQAVKFALDMARGMAFLHT 129 (271)
T ss_dssp EECCTTCBHHHHH-----------HSC---------------------------SSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ecccCCCcHHHHH-----------hhc---------------------------ccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 997653 554444 211 01247888999999999999999999
Q ss_pred CC--CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 625 IG--LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 625 ~g--IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++ |+||||||+|||++.++. ++|+|||++...... .
T Consensus 130 ~~~~i~H~dikp~Nil~~~~~~--~~l~~~~~~~~~~~~----------------------------------------~ 167 (271)
T 3kmu_A 130 LEPLIPRHALNSRSVMIDEDMT--ARISMADVKFSFQSP----------------------------------------G 167 (271)
T ss_dssp SSSCCTTCCCSGGGEEECTTSC--EEEEGGGSCCTTSCT----------------------------------------T
T ss_pred CCCceecCCCccceEEEcCCcc--eeEEeccceeeeccc----------------------------------------C
Confidence 99 999999999999976654 788888876542211 1
Q ss_pred CCCCCccccchhcccCCCcc---cccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh-cccccccCCCHHHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTR---AIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD-RKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~---ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~-~~~~~~~~~~~e~~dLI~~ 776 (934)
..||+.|+|||++.+..++. ++|||||||++|||++| .+||....... ...... .....+...++++.+||.+
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 246 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR-EVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKI 246 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHC-SCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHH
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhC-CCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 45899999999998766544 89999999999999996 67776543322 222222 2233345567899999999
Q ss_pred cccCCCCCCcCHHHHHc
Q 002343 777 LLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~ 793 (934)
||+.||++|||++++++
T Consensus 247 ~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 247 CMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HTCSSGGGSCCHHHHHH
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999985
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=341.16 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=179.3
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.|.+.+.||+|+||+||++.. .+|+.||||++.... .....+|+. +++.++||||+++++++.+.+..|+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID-LLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 35689999999999999999854 579999999986422 123445655 7888999999999999999999999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||+|.+ +|.+++ .... .....+++.+++.++.||+.||+|||
T Consensus 110 v~e~~~~~~L~~~l-----------~~~~-------------------------~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 110 VLELADAGDLSRMI-----------KHFK-------------------------KQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp EEECCCSCBHHHHH-----------HHHH-------------------------HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHH-----------HHhc-------------------------ccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9997764 555544 2110 01345788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++......... ...
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~-----------------------------------~~~ 196 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTAA-----------------------------------HSL 196 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTS--CEEECCC---------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCC--CEEEEeccceeeecCCCccc-----------------------------------ccc
Confidence 99999999999999997665 49999999998654322110 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-h--HHHHHHhh-cc-cccccCCCHHHHHHHHHcc
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-E--RDANIVKD-RK-DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~--~~~~i~~~-~~-~~~~~~~~~e~~dLI~~~L 778 (934)
.||+.|+|||++.+..++.++|||||||++|+|++| ..||.... . .....+.. .. .......++++.+||.+||
T Consensus 197 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 275 (310)
T 2wqm_A 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL-QSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI 275 (310)
T ss_dssp --CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHT
T ss_pred CCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhC-CCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHc
Confidence 589999999999999999999999999999999997 45554321 1 11222221 11 1122345789999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++|||+.+++++
T Consensus 276 ~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 276 NPDPEKRPDVTYVYDV 291 (310)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCCCHHHHHHH
Confidence 9999999999999863
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-38 Score=357.78 Aligned_cols=251 Identities=23% Similarity=0.415 Sum_probs=188.5
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCC--e
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQD--F 541 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~--~ 541 (934)
...+++|.+.+.||+|+||+||++... +|+.||||++.... .+...+|+. +++.++|||||++++++.+.+ .
T Consensus 5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~~~~~~~~~~~~~ 83 (396)
T 4eut_A 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAIEEETTTRH 83 (396)
T ss_dssp ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHH-HHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHH-HHHhcCCCCCCeEEEeeccCCCCe
Confidence 455788999999999999999998554 58999999997532 234556665 788899999999999998755 7
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++ .... ...++++.+++.++.||+.||+
T Consensus 84 ~~lv~e~~~~g~L~~~l-----------~~~~--------------------------~~~~l~~~~~~~i~~qi~~aL~ 126 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVL-----------EEPS--------------------------NAYGLPESEFLIVLRDVVGGMN 126 (396)
T ss_dssp EEEEECCCTTEEHHHHT-----------TSGG--------------------------GTTCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHH-----------Hhhh--------------------------cccCCCHHHHHHHHHHHHHHHH
Confidence 8999997753 444443 2110 1234788999999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEe--cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 621 HLHEIGLIHRDLKPQNVLIS--KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~--~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|||++|||||||||+|||+. .++...+||+|||+|+.+......
T Consensus 127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~---------------------------------- 172 (396)
T 4eut_A 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---------------------------------- 172 (396)
T ss_dssp HHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS----------------------------------
T ss_pred HHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc----------------------------------
Confidence 99999999999999999983 233456999999999876543211
Q ss_pred eeecCCCCCccccchhccc--------CCCcccccccchhhhhHHhhcCCCCCCCCc------hhHHHHHHhhccccc--
Q 002343 699 FFTVGYGSSGWQAPEQLLQ--------GRQTRAIDLFSLGCILFFCITGGKHPYGES------FERDANIVKDRKDLF-- 762 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~--------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~------~~~~~~i~~~~~~~~-- 762 (934)
...+||+.|+|||++.+ ..++.++|||||||++|||++| .+||... ......+....+...
T Consensus 173 --~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg-~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 173 --VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG-SLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp --SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHS-SCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred --ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHC-CCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 11469999999999875 5678999999999999999996 6676421 122222332221100
Q ss_pred ----------------c------cCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 763 ----------------L------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 763 ----------------~------~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+ ....+.+.+||.+||+.||++||++++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 0 1112478899999999999999999998653
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=348.18 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=188.6
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHh-CCCCceeEEEEEEecCC----eEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS-DQHPNIVRWYGVESDQD----FVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~-l~HpNIV~l~g~~~~~~----~~y 543 (934)
..+.+.|.+.+.||+|+||+||++.. +|+.||||++.........+|...+... ++||||+++++++.+.+ ..|
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 45667899999999999999999754 7999999999776656666776633332 79999999999998876 899
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++. ..++++.+++.++.||+.||+|||
T Consensus 117 lv~e~~~~----------g~L~~~l~------------------------------~~~~~~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 117 LVSDYHEH----------GSLFDYLN------------------------------RYTVTVEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp EEECCCTT----------CBHHHHHH------------------------------HCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCC----------CcHHHHHh------------------------------ccCccHHHHHHHHHHHHHHHHHHH
Confidence 99997664 34444332 234577889999999999999999
Q ss_pred --------HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 624 --------EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 624 --------s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
++||+||||||+|||++.++ .+||+|||+++............
T Consensus 157 ~~~~~~~~~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~--------------------------- 207 (342)
T 1b6c_B 157 MEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIA--------------------------- 207 (342)
T ss_dssp CCBCSTTCBCEEECSCCSGGGEEECTTS--CEEECCCTTCEEEETTTTEEEEC---------------------------
T ss_pred HHHhhhcccCCeeeCCCCHHHEEECCCC--CEEEEECCCceeccccccccccc---------------------------
Confidence 89999999999999997665 49999999998765543211100
Q ss_pred ccceeecCCCCCccccchhcccC------CCcccccccchhhhhHHhhcCC---------CCCCCCc------hhHHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQG------RQTRAIDLFSLGCILFFCITGG---------KHPYGES------FERDANI 754 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~------~~t~ksDIWSLGvILyeLltGg---------~~Pf~~~------~~~~~~i 754 (934)
.....||+.|+|||++.+. .++.++|||||||++|||++|. ..||... .......
T Consensus 208 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 283 (342)
T 1b6c_B 208 ----PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283 (342)
T ss_dssp ----CCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred ----cccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHH
Confidence 0124699999999999875 3457899999999999999973 4566442 1122222
Q ss_pred Hhhc-ccc-ccc-----CCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 755 VKDR-KDL-FLV-----EHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 755 ~~~~-~~~-~~~-----~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
+... ... .+. ...+.+.+||.+||+.||++|||+.++++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 284 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 2111 111 111 122478899999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=344.07 Aligned_cols=259 Identities=24% Similarity=0.332 Sum_probs=189.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcE--EEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRS--VAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~--VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++.. .+|+. ||||++..... +...+|+. ++..+ +||||+++++++.+.+..|+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE-VLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHH-HHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHH-HHHhccCCCchhhhceeeeeCCceEE
Confidence 4578889999999999999854 45664 49999865322 34556665 66777 99999999999999999999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||+|++ +|.+++.... .+.. .. . ..........+++.+++.++.||+.||+|||
T Consensus 104 v~e~~~~~~L~~~l~~~~-~~~~--------~~---~------------~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 159 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSR-VLET--------DP---A------------FAIANSTASTLSSQQLLHFAADVARGMDYLS 159 (327)
T ss_dssp EECCCTTCBHHHHHHTTC-HHHH--------CH---H------------HHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHhcc-cccc--------cc---c------------ccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9997753 6665553210 0000 00 0 0000011346789999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++.++ .+||+|||+++........ ...
T Consensus 160 ~~~ivH~dlkp~NIl~~~~~--~~kL~Dfg~~~~~~~~~~~------------------------------------~~~ 201 (327)
T 1fvr_A 160 QKQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKK------------------------------------TMG 201 (327)
T ss_dssp HTTEECSCCSGGGEEECGGG--CEEECCTTCEESSCEECCC---------------------------------------
T ss_pred hCCccCCCCccceEEEcCCC--eEEEcccCcCccccccccc------------------------------------cCC
Confidence 99999999999999997655 4999999999743221100 113
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.+|+.|+|||++.+..++.++|||||||++|+|++++.+||..... .....+... ....+...++++.+||.+||+.|
T Consensus 202 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 281 (327)
T 1fvr_A 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 281 (327)
T ss_dssp -CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred CCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 5788999999999988999999999999999999845777765433 222222222 22233455789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||++++++|
T Consensus 282 p~~Rps~~ell~~ 294 (327)
T 1fvr_A 282 PYERPSFAQILVS 294 (327)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999975
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=339.76 Aligned_cols=243 Identities=21% Similarity=0.309 Sum_probs=181.1
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++..... +...+|+. ++..++||||+++++++.+++..|+|
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREAR-TAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHH-HHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 5688999999999999999855 4689999999865422 23345554 77889999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|.+ +|.+++ .. ...+++.+++.++.||+.||+|||+
T Consensus 113 ~e~~~~~~L~~~l-----------~~-----------------------------~~~~~~~~~~~i~~qi~~~l~~lH~ 152 (309)
T 2h34_A 113 MRLINGVDLAAML-----------RR-----------------------------QGPLAPPRAVAIVRQIGSALDAAHA 152 (309)
T ss_dssp EECCCCEEHHHHH-----------HH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHH-----------Hh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 997764 555544 21 2346788899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++.++ .+||+|||+++......... .....
T Consensus 153 ~~i~H~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~~----------------------------------~~~~~ 196 (309)
T 2h34_A 153 AGATHRDVKPENILVSADD--FAYLVDFGIASATTDEKLTQ----------------------------------LGNTV 196 (309)
T ss_dssp TTCCCSCCCGGGEEECTTS--CEEECSCCC--------------------------------------------------
T ss_pred CcCCcCCCChHHEEEcCCC--CEEEecCccCcccccccccc----------------------------------ccccC
Confidence 9999999999999997665 49999999998654422110 01146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-HHHhhccc---ccccCCCHHHHHHHHHcccC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKDRKD---LFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-~i~~~~~~---~~~~~~~~e~~dLI~~~L~~ 780 (934)
||+.|+|||++.+..++.++|||||||++|+|++| .+||........ ..+..... ......++++.+||.+||+.
T Consensus 197 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 275 (309)
T 2h34_A 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTG-SPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAK 275 (309)
T ss_dssp CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHS-SCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCS
T ss_pred CCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHC-CCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccC
Confidence 89999999999999999999999999999999996 777766544332 22222111 12344567899999999999
Q ss_pred CCCCCc-CHHHHHc
Q 002343 781 NPDLRP-KAQNVLN 793 (934)
Q Consensus 781 DP~~RP-Ta~evL~ 793 (934)
||++|| +++++++
T Consensus 276 dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 276 NPEDRYVTCGDLSA 289 (309)
T ss_dssp SGGGSCSSHHHHHH
T ss_pred CHHHHHHhHHHHHH
Confidence 999999 8888874
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=337.88 Aligned_cols=246 Identities=24% Similarity=0.334 Sum_probs=176.8
Q ss_pred eeecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
+...++|.+.+.||+|+||+||++.. ...||||++..... +...+|+. +++.++||||+++++++ .....+
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG-VLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEES--SSEEEEEEESCSSCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEE--cCceEEEEEeccCCCHHHHHHHHHHHH-HHHhCCCCcEEEEEeec-cCCccE
Confidence 45667899999999999999999743 34699999864432 23445554 78899999999999965 456689
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||+|.+ +|.+++ ... ...+++.+++.++.||+.||+||
T Consensus 96 lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~~L~~l 136 (289)
T 3og7_A 96 IVTQWCEGSSLYHHL-----------HAS----------------------------ETKFEMKKLIDIARQTARGMDYL 136 (289)
T ss_dssp EEEECCCEEEHHHHH-----------TTC-------------------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCcHHHHH-----------hhc----------------------------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997763 444433 211 23467888999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++ .+||+|||+++.......... ...
T Consensus 137 H~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------------~~~ 181 (289)
T 3og7_A 137 HAKSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWSGSHQ---------------------------------FEQ 181 (289)
T ss_dssp HHTTCCCSCCCGGGEEEETTT--EEEECCCC-------------------------------------------------
T ss_pred HhCCcccccCccceEEECCCC--CEEEccceecccccccccccc---------------------------------ccc
Confidence 999999999999999997765 599999999986543211100 111
Q ss_pred CCCCCccccchhcc---cCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcccc-----cccCCCHHHHH
Q 002343 703 GYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKDL-----FLVEHIPEAVD 772 (934)
Q Consensus 703 ~~GT~~Y~APE~l~---~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~~-----~~~~~~~e~~d 772 (934)
..||+.|+|||++. +..++.++|||||||++|+|++| .+||..... .....+...... .....++++.+
T Consensus 182 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (289)
T 3og7_A 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG-QLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260 (289)
T ss_dssp --CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHS-SCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHH
T ss_pred cCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHC-CCCccccchHHHHHHHhcccccCcchhhccccCCHHHHH
Confidence 46999999999997 56789999999999999999996 777765322 222222222111 12245689999
Q ss_pred HHHHcccCCCCCCcCHHHHHc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~ 793 (934)
||.+||+.||.+|||+.++++
T Consensus 261 li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 261 LMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHH
Confidence 999999999999999999985
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=342.33 Aligned_cols=249 Identities=25% Similarity=0.327 Sum_probs=189.3
Q ss_pred eecceEEEeeeecccCcEEEEEEE-----EecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCC-
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQD- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-----~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~- 540 (934)
...+.|.+.+.||+|+||+||++. ..+|+.||||++..... +...+|+. +++.++||||+++++++...+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE-ILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHH-HHHTCCCTTBCCEEEEECC---
T ss_pred cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHH-HHHhCCCCCeeeEEEEEEecCC
Confidence 345678999999999999999985 34689999999975433 23445655 788899999999999987654
Q ss_pred -eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 -~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
..|+|||+|++ +|.+++ ... ...+++.+++.++.||+.|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~a 157 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYL-----------QKH----------------------------KERIDHIKLLQYTSQICKG 157 (326)
T ss_dssp -CCEEEECCCTTCBHHHHH-----------HHS----------------------------TTSSCHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHH-----------Hhc----------------------------ccCCCHHHHHHHHHHHHHH
Confidence 78999997753 555444 211 1346788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++ .+||+|||+++............
T Consensus 158 L~~LH~~~ivH~dikp~NIli~~~~--~~kL~Dfg~~~~~~~~~~~~~~~------------------------------ 205 (326)
T 2w1i_A 158 MEYLGTKRYIHRDLATRNILVENEN--RVKIGDFGLTKVLPQDKEYYKVK------------------------------ 205 (326)
T ss_dssp HHHHHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECCSSCSEEECS------------------------------
T ss_pred HHHHHhCCEeccCCCcceEEEcCCC--cEEEecCcchhhccccccccccc------------------------------
Confidence 9999999999999999999997765 59999999998876543221111
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-----------------HHHHhh-ccc
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-----------------ANIVKD-RKD 760 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-----------------~~i~~~-~~~ 760 (934)
....||..|+|||++.+..++.++|||||||++|+|++| ..|+....... ...+.. ...
T Consensus 206 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (326)
T 2w1i_A 206 --EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY-IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282 (326)
T ss_dssp --SCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHT-TCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC
T ss_pred --cCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhc-CCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCC
Confidence 114578899999999998999999999999999999996 55554332111 111111 112
Q ss_pred ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHc
Q 002343 761 LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 761 ~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~ 793 (934)
..+...++++.+||.+||+.||++|||+.++++
T Consensus 283 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 283 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 233456789999999999999999999999985
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=372.20 Aligned_cols=241 Identities=25% Similarity=0.338 Sum_probs=183.5
Q ss_pred eeeecccCcEEEEEEEEe---cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 478 NKEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.||+|+||+||++... .++.||||++..... +...+|+. +++.++|||||++++++.+ +..|||||||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHH-HHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 458999999999997432 467899999975332 34556665 8888999999999999975 4589999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. +|+|.+++.. ...+++.+++.++.||+.||+|||++||||
T Consensus 452 ~----------~g~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 492 (635)
T 4fl3_A 452 E----------LGPLNKYLQQ-----------------------------NRHVKDKNIIELVHQVSMGMKYLEESNFVH 492 (635)
T ss_dssp T----------TEEHHHHHHH-----------------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred C----------CCCHHHHHhh-----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeC
Confidence 5 3444444421 234678889999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+|+.+..+....... +...||+.|
T Consensus 493 rDLkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~--------------------------------~~~~~t~~y 538 (635)
T 4fl3_A 493 RDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQ--------------------------------THGKWPVKW 538 (635)
T ss_dssp SCCSGGGEEEEETT--EEEECCTTHHHHTTC---------------------------------------------CGGG
T ss_pred CCCChHhEEEeCCC--CEEEEEcCCccccccCccccccc--------------------------------cCCCCceee
Confidence 99999999997765 59999999999876543211110 114578899
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHh-hcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
+|||++.+..++.++|||||||++|||+++|.+||...... ....+. ......+...++++.+||.+||+.||++||+
T Consensus 539 ~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs 618 (635)
T 4fl3_A 539 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 618 (635)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred eChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence 99999999999999999999999999999557788654433 333333 2233344567789999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
+.+|++
T Consensus 619 ~~~l~~ 624 (635)
T 4fl3_A 619 FAAVEL 624 (635)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=341.56 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=186.8
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEe----cCCeEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVES----DQDFVY 543 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~----~~~~~y 543 (934)
+++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++. .....|
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD-MHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHH-HHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHH-HHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46899999999999999999855 6799999999865432 23445554 788999999999999987 345899
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||+|.+ +|.+++ ..... ....+++.+++.++.||+.||+||
T Consensus 107 lv~e~~~~~~L~~~l-----------~~~~~-------------------------~~~~~~~~~~~~i~~qi~~~L~~L 150 (317)
T 2buj_A 107 LLLPFFKRGTLWNEI-----------ERLKD-------------------------KGNFLTEDQILWLLLGICRGLEAI 150 (317)
T ss_dssp EEEECCTTCBHHHHH-----------HHHHT-------------------------TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHH-----------HHHHh-------------------------cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997664 554444 22100 134578899999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|++||+||||||+|||++.++. +||+|||+++............ .. .. ....
T Consensus 151 H~~~ivH~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~~~~~~~~---------~~----~~-------------~~~~ 202 (317)
T 2buj_A 151 HAKGYAHRDLKPTNILLGDEGQ--PVLMDLGSMNQACIHVEGSRQA---------LT----LQ-------------DWAA 202 (317)
T ss_dssp HHTTEECCCCCGGGEEECTTSC--EEECCCSSCEESCEEEESHHHH---------HH----HH-------------HHHH
T ss_pred HhCCcccCCCCHHHEEEcCCCC--EEEEecCcchhccccccccccc---------cc----cc-------------cccc
Confidence 9999999999999999976654 9999999987654221100000 00 00 0011
Q ss_pred CCCCCccccchhcccCC---CcccccccchhhhhHHhhcCCCCCCCCchh---HHHHHHhhc-ccccccCCCHHHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGR---QTRAIDLFSLGCILFFCITGGKHPYGESFE---RDANIVKDR-KDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~---~t~ksDIWSLGvILyeLltGg~~Pf~~~~~---~~~~i~~~~-~~~~~~~~~~e~~dLI~ 775 (934)
..||+.|+|||++.+.. ++.++|||||||++|+|++| ..||..... ......... ........++++.+||.
T Consensus 203 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 281 (317)
T 2buj_A 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG-EGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLN 281 (317)
T ss_dssp HHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHS-SCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred ccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhC-CCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHH
Confidence 35899999999987654 68999999999999999996 677743211 111112211 11223356789999999
Q ss_pred HcccCCCCCCcCHHHHHcC
Q 002343 776 RLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~H 794 (934)
+||+.||++|||+.++++|
T Consensus 282 ~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 282 SMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHhhcChhhCCCHHHHHHH
Confidence 9999999999999999976
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=333.24 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=181.1
Q ss_pred ecceEEEeeeecccCcEEEEEEEEe--cCc--EEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNY--EGR--SVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~--~g~--~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
..+.|.+.+.||+|+||+||++... +++ .||||++.... .+...+|+. +++.++||||+++++++.+.+
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~ 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN-AMHSLDHRNLIRLYGVVLTPP 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSSS
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHH-HHHhCCCCCcccEEEEEccCC
Confidence 3467999999999999999998543 233 69999986432 123445655 778889999999999998765
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.++|||+|. +|+|.+++... ...+++.+++.++.||+.||+
T Consensus 95 -~~~v~e~~~----------~~~L~~~l~~~----------------------------~~~~~~~~~~~~~~~i~~~l~ 135 (291)
T 1u46_A 95 -MKMVTELAP----------LGSLLDRLRKH----------------------------QGHFLLGTLSRYAVQVAEGMG 135 (291)
T ss_dssp -CEEEEECCT----------TCBHHHHHHHH----------------------------GGGSCHHHHHHHHHHHHHHHH
T ss_pred -ceeeEeccc----------CCCHHHHHHhc----------------------------cCCcCHHHHHHHHHHHHHHHH
Confidence 889999665 33444433221 123577889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++||+||||||+|||++.++ .+||+|||+++............
T Consensus 136 ~lH~~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~-------------------------------- 181 (291)
T 1u46_A 136 YLESKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQ-------------------------------- 181 (291)
T ss_dssp HHHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC-CCEEEC---------------------------------
T ss_pred HHHhCCcccCCCchheEEEcCCC--CEEEccccccccccccccchhhh--------------------------------
Confidence 99999999999999999997765 59999999998775433211110
Q ss_pred ecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhc-ccccccCCCHHHHHHHHHc
Q 002343 701 TVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDR-KDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~-~~~~~~~~~~e~~dLI~~~ 777 (934)
....||..|+|||++.+..++.++|||||||++|+|++++.+||...... ....+ ... ........++++.++|.+|
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (291)
T 1u46_A 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 261 (291)
T ss_dssp ----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred ccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHH
Confidence 11457889999999999899999999999999999999557777654332 22222 221 1222345678999999999
Q ss_pred ccCCCCCCcCHHHHHcC
Q 002343 778 LDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 778 L~~DP~~RPTa~evL~H 794 (934)
|+.||++|||+.+++++
T Consensus 262 l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 262 WAHKPEDRPTFVALRDF 278 (291)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred ccCCcccCcCHHHHHHH
Confidence 99999999999999863
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=336.10 Aligned_cols=243 Identities=25% Similarity=0.317 Sum_probs=180.8
Q ss_pred EeeeecccCcEEEEEEEEecCcEEEEEEeecCC-------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 477 ~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
..+.||+|+||+||++. .+++.||||++.... .+...+|+. +++.++||||+++++++.+.+..|+|||+|
T Consensus 35 ~~~~lg~G~~g~Vy~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 112 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGY-VNNTTVAVKKLAAMVDITTEELKQQFDQEIK-VMAKCQHENLVELLGFSSDGDDLCLVYVYM 112 (307)
T ss_dssp TCCEEEECSSEEEEEEE-SSSCEEEEEEECCCTTSCTTTHHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred cCCccccCCCeEEEEEE-ECCceEEEEEEecccCcchHHHHHHHHHHHH-HHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence 35789999999999965 478999999986432 123445655 788899999999999999999999999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
. +|+|.+++.... ....+++..++.++.||+.||+|||++||+|
T Consensus 113 ~----------~~~L~~~l~~~~--------------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 156 (307)
T 2nru_A 113 P----------NGSLLDRLSCLD--------------------------GTPPLSWHMRCKIAQGAANGINFLHENHHIH 156 (307)
T ss_dssp T----------TCBHHHHHHTGG--------------------------GCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred C----------CCcHHHHHHhcc--------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 4 334444332110 1235788899999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+|||++.++ .+||+|||+++.......... .....||+.|
T Consensus 157 ~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~---------------------------------~~~~~g~~~y 201 (307)
T 2nru_A 157 RDIKSANILLDEAF--TAKISDFGLARASEKFAQTVM---------------------------------TSRIVGTTAY 201 (307)
T ss_dssp SCCCGGGEEECTTC--CEEECCCTTCEECCSCSSCEE---------------------------------CSSCCSCGGG
T ss_pred CCCCHHHEEEcCCC--cEEEeeccccccccccccccc---------------------------------ccccCCCcCc
Confidence 99999999997655 499999999987654321110 0114699999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-----HHHHHHhhcc-----------cccccCCCHHHHHH
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-----RDANIVKDRK-----------DLFLVEHIPEAVDL 773 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-----~~~~i~~~~~-----------~~~~~~~~~e~~dL 773 (934)
+|||++.+ .++.++|||||||++|+|++| .+||..... .......... .......++++.+|
T Consensus 202 ~aPE~~~~-~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 279 (307)
T 2nru_A 202 MAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV 279 (307)
T ss_dssp CCHHHHTT-EECTHHHHHHHHHHHHHHHHC-CCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHH
T ss_pred CChHHhcC-CCCccchhHHHHHHHHHHHHC-CCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHH
Confidence 99998865 589999999999999999996 677754321 1111111110 00111123578899
Q ss_pred HHHcccCCCCCCcCHHHHHcC
Q 002343 774 FTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~H 794 (934)
|.+||+.||.+|||+.+++++
T Consensus 280 i~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 280 ASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp HHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=335.11 Aligned_cols=235 Identities=23% Similarity=0.352 Sum_probs=178.0
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVY 543 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~y 543 (934)
..+++++...+.||+|+||+||++.. .+++.||||++... ....+|+..+.+..+||||+++++++.+ ....|
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 34445555558899999999999854 57899999998643 4567788767788899999999999887 77899
Q ss_pred EEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 544 LVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
+|||||.+ +|.+++ ... ....+++.+++.++.||+.||+||
T Consensus 92 lv~e~~~~~~L~~~l-----------~~~---------------------------~~~~~~~~~~~~i~~qi~~~l~~l 133 (299)
T 3m2w_A 92 IVMECLDGGELFSRI-----------QDR---------------------------GDQAFTEREASEIMKSIGEAIQYL 133 (299)
T ss_dssp EEECCCCSCBHHHHH-----------HHC---------------------------TTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCcHHHHH-----------Hhc---------------------------cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997764 555544 211 123578889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 623 HEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
|++||+||||||+|||++.++ ...+||+|||+|+...
T Consensus 134 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------------------------ 171 (299)
T 3m2w_A 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------------------------------ 171 (299)
T ss_dssp HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------------------------------------
T ss_pred HhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc------------------------------------------
Confidence 999999999999999997632 3469999999986421
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHH-----HHhhccccc----ccCCCHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDAN-----IVKDRKDLF----LVEHIPEAVD 772 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~-----i~~~~~~~~----~~~~~~e~~d 772 (934)
+..++.++|||||||++|||++| .+||......... .+....... ....++++.+
T Consensus 172 ---------------~~~~~~~~DiwslG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 3m2w_A 172 ---------------GEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 235 (299)
T ss_dssp ---------------TCGGGGHHHHHHHHHHHHHHHHS-SCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHH
T ss_pred ---------------cccCCchhhHHHHHHHHHHHHHC-CCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHH
Confidence 13467899999999999999996 6677543222110 000000011 1345789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCCcc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~~~ 801 (934)
||.+||+.||++|||+.|+++||||....
T Consensus 236 li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 236 LIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 99999999999999999999999996644
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=356.48 Aligned_cols=264 Identities=20% Similarity=0.239 Sum_probs=198.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCC-CceeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQH-PNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~H-pNIV~l~g~~~~~~~~yLV 545 (934)
..+++.|.+.+.||+|+||+||++.. .+++.||||++..... ....+|+. ++..+.| ++|..+..++.+.+..|||
T Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~-il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK-IYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHH-HHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHH-HHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 35778899999999999999999854 5689999998865433 34566666 5555555 6777777888889999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.++|.+++... ...+++.+++.|+.||+.||+|||++
T Consensus 82 me~~g~sL~~ll~~~---------------------------------------~~~l~~~~~~~i~~qi~~aL~yLH~~ 122 (483)
T 3sv0_A 82 MDLLGPSLEDLFNFC---------------------------------------SRKLSLKTVLMLADQMINRVEFVHSK 122 (483)
T ss_dssp EECCCCBHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHHHhh---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 998877777766321 23468889999999999999999999
Q ss_pred CCcccCCCCCeEEEe---cCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 626 GLIHRDLKPQNVLIS---KDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 626 gIVHRDLKP~NILl~---~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|||||||||+||||+ .++ .+||+|||+|+.+............ ....
T Consensus 123 gIvHrDIKP~NILl~~~~~~~--~vkL~DFGla~~~~~~~~~~~~~~~----------------------------~~~~ 172 (483)
T 3sv0_A 123 SFLHRDIKPDNFLMGLGRRAN--QVYIIDFGLAKKYRDTSTHQHIPYR----------------------------ENKN 172 (483)
T ss_dssp TEECCCCCGGGEEECCGGGTT--CEEECCCTTCEECBCTTTCCBCCCC----------------------------CCCC
T ss_pred CEeecccCcceEEEecCCCCC--eEEEEeCCcceeccCCccccccccc----------------------------cccc
Confidence 999999999999994 343 5999999999987654322110000 0112
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh----H-HHHHHhhc----ccccccCCCHHHHHH
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE----R-DANIVKDR----KDLFLVEHIPEAVDL 773 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~----~-~~~i~~~~----~~~~~~~~~~e~~dL 773 (934)
.+||+.|+|||++.+..++.++|||||||+||||++| .+||..... . ...+.... ........++++.+|
T Consensus 173 ~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~l 251 (483)
T 3sv0_A 173 LTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASY 251 (483)
T ss_dssp CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHH
T ss_pred cCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhC-CCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHH
Confidence 5799999999999999999999999999999999996 677754211 1 11111111 111124557899999
Q ss_pred HHHcccCCCCCCcCHHHHH----------cCCCCCCccch
Q 002343 774 FTRLLDPNPDLRPKAQNVL----------NHPFFWTADTR 803 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL----------~HPff~~~~~~ 803 (934)
|.+||+.||++||++.+|+ .|+|+...++.
T Consensus 252 i~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~ 291 (483)
T 3sv0_A 252 FHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 291 (483)
T ss_dssp HHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHH
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCch
Confidence 9999999999999999875 36776555554
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=350.22 Aligned_cols=236 Identities=16% Similarity=0.144 Sum_probs=176.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhC---------CCCceeEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASD---------QHPNIVRW 532 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l---------~HpNIV~l 532 (934)
+.|.+.+.||+|+||+||++.. +|+.||||++..... +...+|+. +++.+ .|||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII-ISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHH-HHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHH-HHHHHHHhhccccccCCchhhh
Confidence 4577788999999999999865 889999999975431 45667776 44444 48888888
Q ss_pred EEEEe------------------------------cCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHH
Q 002343 533 YGVES------------------------------DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581 (934)
Q Consensus 533 ~g~~~------------------------------~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~ 581 (934)
++++. +.+.+|||||||.+ ++.+.+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----------------------- 154 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----------------------- 154 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----------------------
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----------------------
Confidence 77643 26889999998865 3443331
Q ss_pred HHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCeEEEecCC-----------------
Q 002343 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDK----------------- 643 (934)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH-s~gIVHRDLKP~NILl~~d~----------------- 643 (934)
...+++.+++.++.||+.||+||| ++|||||||||+|||++.++
T Consensus 155 ------------------~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~ 216 (336)
T 2vuw_A 155 ------------------TKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPS 216 (336)
T ss_dssp ------------------TTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEEC
T ss_pred ------------------hcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccC
Confidence 234678899999999999999999 99999999999999998765
Q ss_pred -CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcc
Q 002343 644 -SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTR 722 (934)
Q Consensus 644 -~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ 722 (934)
...+||+|||+|+...... .+||+.|||||++.+.. +.
T Consensus 217 ~~~~vkL~DFG~a~~~~~~~----------------------------------------~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 217 CGLQVSIIDYTLSRLERDGI----------------------------------------VVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp TTEEEEECCCTTCBEEETTE----------------------------------------EECCCCTTCSGGGCCCS-SH
T ss_pred CCceEEEeeccccEecCCCc----------------------------------------EEEeecccChhhhcCCC-cc
Confidence 2369999999998764320 35999999999998766 89
Q ss_pred cccccchhhh-hHHhhcCCCCCCCCchh--HHH-HHHhhcc--cc----cccCCCHHHHHHHHHcccCCCCCCcCHHHHH
Q 002343 723 AIDLFSLGCI-LFFCITGGKHPYGESFE--RDA-NIVKDRK--DL----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 723 ksDIWSLGvI-LyeLltGg~~Pf~~~~~--~~~-~i~~~~~--~~----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL 792 (934)
++||||||++ .+++++| .+||..... ... .+..... .. .....++++++||.+||+.| |++|+|
T Consensus 256 ~~Diwsl~~~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGE-YHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHTTCTTS-CCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ceehhhhhCCCCcccccc-cCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 9999998887 6667774 777754211 111 1111111 00 11234578999999999977 999999
Q ss_pred -cCCCCC
Q 002343 793 -NHPFFW 798 (934)
Q Consensus 793 -~HPff~ 798 (934)
+||||.
T Consensus 330 ~~Hp~f~ 336 (336)
T 2vuw_A 330 CQHSLFK 336 (336)
T ss_dssp HHCGGGC
T ss_pred hcCCCcC
Confidence 999984
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=365.31 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=189.7
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
...+.|.+.+.||+|+||+||++... .+..||||++..... +...+|+. +++.++|||||++++++. ++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEe-cCc
Confidence 34567999999999999999998553 256899999865433 23445554 788899999999999985 456
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
.|+|||||. +|+|.+++... ...+++..++.++.||+.||+|
T Consensus 465 ~~lv~E~~~----------~g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~aL~~ 506 (656)
T 2j0j_A 465 VWIIMELCT----------LGELRSFLQVR----------------------------KFSLDLASLILYAYQLSTALAY 506 (656)
T ss_dssp CEEEEECCT----------TCBHHHHHHHT----------------------------TTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCC----------CCcHHHHHHhc----------------------------cCCCCHHHHHHHHHHHHHHHHH
Confidence 899999665 34444444321 2346788899999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++ .+||+|||+|+.+........ .
T Consensus 507 LH~~givHrDikp~NILl~~~~--~vkL~DFG~a~~~~~~~~~~~----------------------------------~ 550 (656)
T 2j0j_A 507 LESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKA----------------------------------S 550 (656)
T ss_dssp HHHTTCCCSCCSGGGEEEEETT--EEEECCCCCCCSCCC-----------------------------------------
T ss_pred HHhCCccccccchHhEEEeCCC--CEEEEecCCCeecCCCcceec----------------------------------c
Confidence 9999999999999999998765 599999999987644321110 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
...||+.|+|||++.+..++.++|||||||++|||+++|.+||....... . .+........+...++++.+||.+||+
T Consensus 551 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~ 630 (656)
T 2j0j_A 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWA 630 (656)
T ss_dssp ---CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred CCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcC
Confidence 14578899999999999999999999999999999986688887543322 2 233333333455667899999999999
Q ss_pred CCCCCCcCHHHHHc
Q 002343 780 PNPDLRPKAQNVLN 793 (934)
Q Consensus 780 ~DP~~RPTa~evL~ 793 (934)
.||++|||+.++++
T Consensus 631 ~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 631 YDPSRRPRFTELKA 644 (656)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred CChhHCcCHHHHHH
Confidence 99999999999985
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=350.48 Aligned_cols=251 Identities=16% Similarity=0.151 Sum_probs=177.9
Q ss_pred cceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCC-Cc---------------
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQH-PN--------------- 528 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~H-pN--------------- 528 (934)
.+.|...+.||+|+||+||++. ..+|+.||||++..... +...+|+. ++..+.| +|
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVL-RLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHH-GGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHH-HHHhhccCCCHHHHHHhcccccchh
Confidence 3568888999999999999986 45699999999873221 23344444 5566665 21
Q ss_pred ------eeEEEEEEec-----CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHh
Q 002343 529 ------IVRWYGVESD-----QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597 (934)
Q Consensus 529 ------IV~l~g~~~~-----~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (934)
...+..++.. ....+++|+++.++|.+++.. +......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~--------l~~~~~~----------------------- 204 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEV--------LLSHSST----------------------- 204 (413)
T ss_dssp EEECCC---------------CCSEEEEEECCSEEHHHHHHH--------HHHHTTT-----------------------
T ss_pred hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHH--------hhccccc-----------------------
Confidence 1111122222 234788999888888877632 1110000
Q ss_pred hhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhH
Q 002343 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLV 677 (934)
Q Consensus 598 ~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~ 677 (934)
...+++..++.++.||+.||+|||++|||||||||+|||++.++. +||+|||+|+......
T Consensus 205 --~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~--~kL~DFG~a~~~~~~~--------------- 265 (413)
T 3dzo_A 205 --HKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG--VFLTGFEHLVRDGASA--------------- 265 (413)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCGGGCEETTEEE---------------
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCe--EEEEeccceeecCCcc---------------
Confidence 112356678899999999999999999999999999999977665 9999999988643320
Q ss_pred HHHHHHhhhhhhccccccccceeecCCCCCccccchhc----------ccCCCcccccccchhhhhHHhhcCCCCCCCCc
Q 002343 678 YLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQL----------LQGRQTRAIDLFSLGCILFFCITGGKHPYGES 747 (934)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l----------~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~ 747 (934)
+..+| +.|+|||++ .+..++.++|||||||++|||++| ..||...
T Consensus 266 -----------------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg-~~Pf~~~ 320 (413)
T 3dzo_A 266 -----------------------VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA-DLPNTDD 320 (413)
T ss_dssp -----------------------CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS-SCCCCTT
T ss_pred -----------------------ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC-CCCCCCc
Confidence 11468 999999999 555688999999999999999996 6677654
Q ss_pred hhHH-HHHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 748 FERD-ANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 748 ~~~~-~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.... ...+. ......++++.+||.+||+.||++||++.++++||||.....
T Consensus 321 ~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~ 372 (413)
T 3dzo_A 321 AALGGSEWIF----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 372 (413)
T ss_dssp GGGSCSGGGG----SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred chhhhHHHHH----hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHH
Confidence 3211 11110 011345689999999999999999999999999999965433
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=331.71 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=180.7
Q ss_pred ecceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
..+.|.+.+.||+|+||+||++... ..||||++..... +...+|+. +++.++||||+++++++.+.+..|+|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVM-AYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGG-GGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHH-HHhcCCCCCEeEEEEEEecCCceEEE
Confidence 3466888999999999999997543 3599999864321 23345555 77888999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||+|.+ +|.+++ ... ...+++.+++.++.||+.||+|||+
T Consensus 108 ~e~~~~~~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~al~~lH~ 148 (319)
T 2y4i_B 108 TSLCKGRTLYSVV-----------RDA----------------------------KIVLDVNKTRQIAQEIVKGMGYLHA 148 (319)
T ss_dssp CBCCCSEEHHHHT-----------TSS----------------------------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCcHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 997763 454443 210 1246778899999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+||+||||||+|||++ ++ .+||+|||+++............. .....
T Consensus 149 ~~i~H~dlkp~NIl~~-~~--~~~l~Dfg~~~~~~~~~~~~~~~~------------------------------~~~~~ 195 (319)
T 2y4i_B 149 KGILHKDLKSKNVFYD-NG--KVVITDFGLFSISGVLQAGRREDK------------------------------LRIQN 195 (319)
T ss_dssp TTCCCCCCCSTTEEEC-----CCEECCCSCCC----------CCS------------------------------CBCCS
T ss_pred CCccccCCChhhEEEe-CC--CEEEeecCCccccccccccccccc------------------------------cccCC
Confidence 9999999999999996 33 489999999876543211110000 11245
Q ss_pred CCCccccchhccc---------CCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-c-cccccCCCHHHHH
Q 002343 705 GSSGWQAPEQLLQ---------GRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-K-DLFLVEHIPEAVD 772 (934)
Q Consensus 705 GT~~Y~APE~l~~---------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~-~~~~~~~~~e~~d 772 (934)
||+.|+|||++.+ ..++.++|||||||++|||++| ..||...... ....+... . .......++++.+
T Consensus 196 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 274 (319)
T 2y4i_B 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR-EWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISD 274 (319)
T ss_dssp GGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS-SCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHH
T ss_pred CcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHH
Confidence 8999999999974 3578999999999999999996 6677654332 22222222 1 1222245678999
Q ss_pred HHHHcccCCCCCCcCHHHHHc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~ 793 (934)
||.+||..||++|||+.++++
T Consensus 275 li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 275 ILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHCSSTTTSCCHHHHHH
T ss_pred HHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999999986
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=367.40 Aligned_cols=238 Identities=27% Similarity=0.391 Sum_probs=185.3
Q ss_pred ceeecceEEEeeeecccCcEEEEEEEEe--cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCe
Q 002343 468 GRRIGKLVVFNKEIAKGSNGTVVLEGNY--EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (934)
Q Consensus 468 ~~~i~~~~~~~~~IG~GsfGtVy~~~~~--~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~ 541 (934)
+..+.++|.+.+.||+|+||+||++... +|+.||||++...... ...+|+. ++..++|||||++++++.+.+.
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~~~~~~~~~~~ 153 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ-FLAEVVHPSIVQIFNFVEHTDR 153 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHG-GGGGCCCTTBCCEEEEEEEECT
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHH-HHHhcCCCCcCeEeeeEeecCC
Confidence 4567788999999999999999998654 5899999998654332 2345554 7788999999999999987655
Q ss_pred -----EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHH
Q 002343 542 -----VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDI 615 (934)
Q Consensus 542 -----~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qI 615 (934)
.|||||||++ +|.+++ ...+++.+++.++.||
T Consensus 154 ~~~~~~~lv~E~~~g~~L~~~~------------------------------------------~~~l~~~~~~~~~~qi 191 (681)
T 2pzi_A 154 HGDPVGYIVMEYVGGQSLKRSK------------------------------------------GQKLPVAEAIAYLLEI 191 (681)
T ss_dssp TSCEEEEEEEECCCCEECC----------------------------------------------CCCCHHHHHHHHHHH
T ss_pred CCCceeEEEEEeCCCCcHHHHH------------------------------------------hCCCCHHHHHHHHHHH
Confidence 7999997764 443322 1256888999999999
Q ss_pred HHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccc
Q 002343 616 VSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQF 695 (934)
Q Consensus 616 a~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (934)
+.||+|||++|||||||||+|||++.+ .+||+|||+++......
T Consensus 192 ~~aL~~lH~~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~~--------------------------------- 235 (681)
T 2pzi_A 192 LPALSYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSFG--------------------------------- 235 (681)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECSS---CEEECCCTTCEETTCCS---------------------------------
T ss_pred HHHHHHHHHCCCeecccChHHeEEeCC---cEEEEecccchhcccCC---------------------------------
Confidence 999999999999999999999999754 48999999998754321
Q ss_pred ccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHH
Q 002343 696 GVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 696 g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~ 775 (934)
..+||+.|+|||++.+. ++.++|||||||++|+|++| .+||........ .........++++.+||.
T Consensus 236 ------~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g-~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 302 (681)
T 2pzi_A 236 ------YLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLD-LPTRNGRYVDGL-----PEDDPVLKTYDSYGRLLR 302 (681)
T ss_dssp ------CCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSC-CCEETTEECSSC-----CTTCHHHHHCHHHHHHHH
T ss_pred ------ccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhC-CCCCcccccccc-----cccccccccCHHHHHHHh
Confidence 14699999999999765 48999999999999999996 666654221100 000011122468899999
Q ss_pred HcccCCCCCCcCHHHHHcCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff 797 (934)
+||+.||++||+..+.+.|+|+
T Consensus 303 ~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 303 RAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHTCSSGGGSCSSHHHHHHHHH
T ss_pred hhccCChhhCCCHHHHHHHHHH
Confidence 9999999999998888888775
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=364.58 Aligned_cols=253 Identities=27% Similarity=0.346 Sum_probs=186.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec------CCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD------QDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------~~~ 541 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ-IMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHH-HHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHH-HHHhCCCCCCCceeeeecccccccCCCe
Confidence 5688899999999999999854 5689999999865432 23445665 7888999999999999766 678
Q ss_pred EEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 542 ~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
.|+|||||.+ +|.+++ .... ...++++..++.++.||+.||+
T Consensus 93 ~~LVmEy~~ggsL~~~L-----------~~~~--------------------------~~~~lse~~i~~I~~QLl~aL~ 135 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYL-----------NQFE--------------------------NCCGLKEGPIRTLLSDISSALR 135 (676)
T ss_dssp CCCEEECCSSCBHHHHH-----------HSSS--------------------------CTTCCCSSHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHH-----------Hhcc--------------------------cCCCCCHHHHHHHHHHHHHHHH
Confidence 8999997743 454443 2210 0234677889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
|||++||+||||||+|||++.++ ...+||+|||+++........
T Consensus 136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~----------------------------------- 180 (676)
T 3qa8_A 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC----------------------------------- 180 (676)
T ss_dssp HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCC-----------------------------------
T ss_pred HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccccc-----------------------------------
Confidence 99999999999999999998654 346899999999876543211
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHH-----------HHHh-----h----cc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-----------NIVK-----D----RK 759 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~-----------~i~~-----~----~~ 759 (934)
....||+.|+|||++.+..++.++|||||||++|+|++| .+||........ .... . ..
T Consensus 181 -~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~ 258 (676)
T 3qa8_A 181 -TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG-FRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258 (676)
T ss_dssp -CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSS-CSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCS
T ss_pred -ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHC-CCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccc
Confidence 114699999999999999999999999999999999996 666643211100 0000 0 00
Q ss_pred cc-----cccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 760 DL-----FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 760 ~~-----~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.. .....++++.+||.+||..||++|||+.++++||||...
T Consensus 259 ~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 00 011134689999999999999999999999999999543
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=314.60 Aligned_cols=215 Identities=13% Similarity=0.060 Sum_probs=165.1
Q ss_pred eecceEEEeeeecccCcEEEEEEEEe-cCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGNY-EGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~~-~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
.++++|.+.+.||+|+||+||++... +|+.||||++..... +...+|+. .+..++||||+++++++.+++..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTL-RLSRIDKPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHH-HHhcCCCCCcceeeEEEEECCcE
Confidence 56778999999999999999998654 589999999975432 33455655 67889999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|+|||||.+ +|.+++ . .+....++..++.||+.||+|
T Consensus 107 ~lv~e~~~g~~L~~~l-----------~-------------------------------~~~~~~~~~~i~~ql~~aL~~ 144 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVA-----------D-------------------------------TSPSPVGAIRAMQSLAAAADA 144 (286)
T ss_dssp EEEEECCCEEEHHHHH-----------T-------------------------------TCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHH-----------h-------------------------------cCCChHHHHHHHHHHHHHHHH
Confidence 999997763 555544 1 112344678899999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++. +||+++|
T Consensus 145 lH~~givH~Dikp~NIll~~~g~--~kl~~~~------------------------------------------------ 174 (286)
T 3uqc_A 145 AHRAGVALSIDHPSRVRVSIDGD--VVLAYPA------------------------------------------------ 174 (286)
T ss_dssp HHHTTCCCCCCSGGGEEEETTSC--EEECSCC------------------------------------------------
T ss_pred HHHCCCccCCCCcccEEEcCCCC--EEEEecc------------------------------------------------
Confidence 99999999999999999987765 7776432
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H----HHHhhccc---ccccCCCHHHHHH
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A----NIVKDRKD---LFLVEHIPEAVDL 773 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~----~i~~~~~~---~~~~~~~~e~~dL 773 (934)
|++ .++.++|||||||++|||++| .+||....... . ........ ......++++.+|
T Consensus 175 -------~~~-------~~~~~~Di~slG~il~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 239 (286)
T 3uqc_A 175 -------TMP-------DANPQDDIRGIGASLYALLVN-RWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAV 239 (286)
T ss_dssp -------CCT-------TCCHHHHHHHHHHHHHHHHHS-EECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHH
T ss_pred -------ccC-------CCCchhHHHHHHHHHHHHHHC-CCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHH
Confidence 444 368899999999999999996 66775432211 0 00111111 1123467899999
Q ss_pred HHHcccCCCCCCcCHHHHHc
Q 002343 774 FTRLLDPNPDLRPKAQNVLN 793 (934)
Q Consensus 774 I~~~L~~DP~~RPTa~evL~ 793 (934)
|.+||+.||++| |+.|+++
T Consensus 240 i~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 240 AARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHcccCCccC-CHHHHHH
Confidence 999999999999 9999986
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-29 Score=297.86 Aligned_cols=225 Identities=15% Similarity=0.066 Sum_probs=136.5
Q ss_pred eeeecccCcEEEEEE-EEecCcEEEEEEeecCCh-------------hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeE
Q 002343 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-------------DVALKEIQNLIASD-QHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~-~~~~g~~VAVK~l~~~~~-------------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~ 542 (934)
....+.|++|.+..+ ..+.|+.||||++.+... +...+|+. +++.+ .|+||+++++++++++..
T Consensus 239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~~~~~~~i~~~~~~~ed~~~~ 317 (569)
T 4azs_A 239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIK-FLTQPPAGFDAPAVLAHGENAQSG 317 (569)
T ss_dssp ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHH-HHHSCCTTCCCCCEEEEEECSSEE
T ss_pred hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHH-HHHhcCCCCCeeEEEEEEEECCEE
Confidence 346788888877765 567799999999975421 23445665 66666 799999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|||||||+| +|.+++ .. ..+++. .+|+.||+.||+|
T Consensus 318 yLVMEyv~G~~L~d~i-----------~~-----------------------------~~~l~~---~~I~~QIl~AL~y 354 (569)
T 4azs_A 318 WLVMEKLPGRLLSDML-----------AA-----------------------------GEEIDR---EKILGSLLRSLAA 354 (569)
T ss_dssp EEEEECCCSEEHHHHH-----------HT-----------------------------TCCCCH---HHHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHH-----------Hh-----------------------------CCCCCH---HHHHHHHHHHHHH
Confidence 999997765 455544 21 123343 3588999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++|||||||||+||||+.++. +||+|||+|+.+..+.... +
T Consensus 355 lH~~GIIHRDIKPeNILL~~dg~--vKL~DFGlAr~~~~~~~~~-----------------------------------~ 397 (569)
T 4azs_A 355 LEKQGFWHDDVRPWNVMVDARQH--ARLIDFGSIVTTPQDCSWP-----------------------------------T 397 (569)
T ss_dssp HHHTTCEESCCCGGGEEECTTSC--EEECCCTTEESCC---CCS-----------------------------------H
T ss_pred HHHCCceeccCchHhEEECCCCC--EEEeecccCeeCCCCCccc-----------------------------------c
Confidence 99999999999999999987765 9999999998765432110 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCC
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+.+||++|||||++.+ .+..++|+||+|++++++.++.. ++ ...+... .. . ...+.++...+...+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~-~~-------~~~l~~~-~~--~--~~~~~~l~~~l~~~~ 463 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS-NW-------LYAVWQE-PV--E--RWNFVLLLALFEKKA 463 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHH-HH-------HHHHHTS-CG--G--GCSHHHHHHHHHTGG
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccc-hh-------HHHhhcC-CC--C--CCcHHHHHHHHhCCC
Confidence 2569999999999975 56788999999999998877522 11 0000000 00 0 112455666667777
Q ss_pred CCCCcCHHHHHcCCCC
Q 002343 782 PDLRPKAQNVLNHPFF 797 (934)
Q Consensus 782 P~~RPTa~evL~HPff 797 (934)
|..||.......|+|.
T Consensus 464 ~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 464 KLPSAEQQRGATEQWI 479 (569)
T ss_dssp GSCCGGGSSCCHHHHH
T ss_pred CCCCCChhhhccchhH
Confidence 7777766655555543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-24 Score=256.60 Aligned_cols=182 Identities=19% Similarity=0.168 Sum_probs=128.0
Q ss_pred EEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
...+.||+|+||+||++ ...++.+|+|+...... +...+|+. +++.++||||+++..++.+.+..||
T Consensus 339 ~~~~~LG~G~fg~Vy~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRD-SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREAR-YLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEE-ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHH-HHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEE-EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHH-HHHhcCCCCcCceEEEEEeCCccEE
Confidence 34568999999999997 67789999998754321 12355665 7788899999955555556667799
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||+ ++|.+++ .. ++.++.||+.||+|||
T Consensus 417 VmE~~~ggsL~~~l-----------~~-------------------------------------~~~i~~qi~~aL~~LH 448 (540)
T 3en9_A 417 MMSYINGKLAKDVI-----------ED-------------------------------------NLDIAYKIGEIVGKLH 448 (540)
T ss_dssp EEECCCSEEHHHHS-----------TT-------------------------------------CTHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHH-----------HH-------------------------------------HHHHHHHHHHHHHHHH
Confidence 999775 3444443 11 3478999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++||+||||||+|||++. .+||+|||+|+........... .+ . .....
T Consensus 449 ~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~~~~~---------~~---~----------------~~~~~ 496 (540)
T 3en9_A 449 KNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDEDKAVD---------LI---V----------------FKKAV 496 (540)
T ss_dssp HTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHHHHHH---------HH---H----------------HHHHH
T ss_pred HCcCccCCCCHHHEEECC----eEEEEECccCEECCCccccccc---------hh---h----------------hhhhh
Confidence 999999999999999965 5999999999987543211000 00 0 00124
Q ss_pred CCCCccccchhccc--CCCcccccccchhhhhHHhhcC
Q 002343 704 YGSSGWQAPEQLLQ--GRQTRAIDLFSLGCILFFCITG 739 (934)
Q Consensus 704 ~GT~~Y~APE~l~~--~~~t~ksDIWSLGvILyeLltG 739 (934)
+||+.|||||++.. ..|+..+|+||..+-..+.+.+
T Consensus 497 ~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~ 534 (540)
T 3en9_A 497 LSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVER 534 (540)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHT
T ss_pred cCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 69999999999987 6788899999998887777663
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=213.79 Aligned_cols=131 Identities=20% Similarity=0.119 Sum_probs=98.0
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC---------------------hhHHHHHHHHHHHhCCCCcee
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH---------------------HDVALKEIQNLIASDQHPNIV 530 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~---------------------~~~~~~Ei~~ll~~l~HpNIV 530 (934)
+..|.+.+.||+|+||.||++...+|+.||||.+.... .....+|+. +++.++|+
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~-~l~~l~~~--- 164 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR-ALQKLQGL--- 164 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH-HHHHTTTS---
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH-HHHhccCC---
Confidence 44567789999999999999877679999999986422 123456666 66666644
Q ss_pred EEEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHH
Q 002343 531 RWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (934)
Q Consensus 531 ~l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 609 (934)
++++++.. +..|+|||||++ +|.+ +. ..+..
T Consensus 165 ~v~~~~~~-~~~~lvmE~~~g~~L~~-l~----------------------------------------------~~~~~ 196 (282)
T 1zar_A 165 AVPKVYAW-EGNAVLMELIDAKELYR-VR----------------------------------------------VENPD 196 (282)
T ss_dssp SSCCEEEE-ETTEEEEECCCCEEGGG-CC----------------------------------------------CSCHH
T ss_pred CcCeEEec-cceEEEEEecCCCcHHH-cc----------------------------------------------hhhHH
Confidence 44444433 556999998865 5554 20 01234
Q ss_pred HHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 610 KVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 610 ~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
.++.||+.||+|||++|||||||||+|||++ ++ .+||+|||+|+.
T Consensus 197 ~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~--~vkl~DFG~a~~ 241 (282)
T 1zar_A 197 EVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE--GIWIIDFPQSVE 241 (282)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT--EEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC--cEEEEECCCCeE
Confidence 6899999999999999999999999999998 54 599999999863
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=207.96 Aligned_cols=174 Identities=20% Similarity=0.329 Sum_probs=129.3
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCC---CceeeccccccCCCCccccccCC-CCceeEEeccccCceeecccCHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG---RPIYSSYQASFNSNASEFYLDVD-EDWELYFHSKRFGKMKKLSSSAE 123 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~---~~i~~~~~~~~~~~~~~~~l~~~-~d~~ly~~~~~~g~~~klp~ti~ 123 (934)
+++++|+|.||.|||+|..||+++|+++.+ |++.....+.. .....|+..| .||.||.++...| ++|+|++++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~--~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRL--ETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTT--TSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccc--cCCcEEEEEECCCCEEEEEECCCC-cEEeeeccc
Confidence 578999999999999999999999999986 66654433322 1235676765 9999999998776 669999999
Q ss_pred HHHhcCCeee-------------cCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccc
Q 002343 124 EYIRRMPYIS-------------KDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELV 190 (934)
Q Consensus 124 e~v~~sP~~s-------------~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (934)
++|..||++. .||.||+|++..++++||++||+++.+++...... ++... ...|+... .+
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~--~~~~~--~e~~~~~~---d~ 159 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG--YFGSQ--SVDCSPEE---KI 159 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC----------------------
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc--ccccc--cccccccc---cc
Confidence 9999999993 79999999999999999999999999998654211 11100 11455211 01
Q ss_pred cccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEeeeecccccc
Q 002343 191 ESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFRC 238 (934)
Q Consensus 191 ~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~~a~~~~ 238 (934)
+... ....|||+|++|.|.+++ ++|. +||++|.+|.+....
T Consensus 160 ~~d~-----~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~ 200 (339)
T 2be1_A 160 KLQE-----CENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLD 200 (339)
T ss_dssp ----------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTT
T ss_pred cccc-----CCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccc
Confidence 1101 123899999999999999 5787 999999999876654
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-18 Score=185.98 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=97.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcE--EEEEEeecCCh---------------------------hHHHHHHHHHHH
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRS--VAVKRLVKTHH---------------------------DVALKEIQNLIA 522 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~--VAVK~l~~~~~---------------------------~~~~~Ei~~ll~ 522 (934)
..|.+.+.||+|+||+||++.. .+|+. ||||++..... ....+|+. .+.
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~ 125 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFR-NLE 125 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHH-HHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHH-HHH
Confidence 4577889999999999999866 78999 99998743210 13455665 555
Q ss_pred hCCCCc--eeEEEEEEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhh
Q 002343 523 SDQHPN--IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKA 600 (934)
Q Consensus 523 ~l~HpN--IV~l~g~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (934)
.+.|+| +...++. +..|||||||+++- .....|.+....
T Consensus 126 ~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g-----~~~~~L~~~~~~------------------------------ 166 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY----MKNVLLMEFIGEDE-----LPAPTLVELGRE------------------------------ 166 (258)
T ss_dssp HHHHTTCCCCCEEEE----ETTEEEEECCEETT-----EECCBHHHHGGG------------------------------
T ss_pred HHHhCCCCCCeEEEc----CCCEEEEEecCCCC-----CccccHHHHhhc------------------------------
Confidence 555554 3344443 35689999884210 000122221100
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 601 NGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 601 ~~l~~~~i~~i~~qIa~gL~yLH-s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
.++.++..++.||+.||.||| +.|||||||||+|||++. .++|+|||+|....
T Consensus 167 --~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~~~ 220 (258)
T 1zth_A 167 --LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVTLR 220 (258)
T ss_dssp --GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEETT
T ss_pred --cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECcccccCC
Confidence 012346789999999999999 999999999999999965 48999999998754
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-16 Score=176.61 Aligned_cols=134 Identities=13% Similarity=0.182 Sum_probs=90.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC-----------------hhH--------HHHHHHHHHHhCCCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----------------HDV--------ALKEIQNLIASDQHP 527 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-----------------~~~--------~~~Ei~~ll~~l~Hp 527 (934)
..|.+.+.||+|+||.||++...+|+.||||++.... ... +.+|..++ ..+.+.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL-~rL~~~ 173 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM-KALYEE 173 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH-HHHHHT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH-HHHHhc
Confidence 3488899999999999999988889999999874210 001 12344322 222222
Q ss_pred ce--eEEEEEEecCCeEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCC
Q 002343 528 NI--VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHP 604 (934)
Q Consensus 528 NI--V~l~g~~~~~~~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 604 (934)
++ .+.+++. ..+||||||++ +|.++. .
T Consensus 174 gv~vp~p~~~~----~~~LVME~i~G~~L~~l~----------------------------------------------~ 203 (397)
T 4gyi_A 174 GFPVPEPIAQS----RHTIVMSLVDALPMRQVS----------------------------------------------S 203 (397)
T ss_dssp TCSCCCEEEEE----TTEEEEECCSCEEGGGCC----------------------------------------------C
T ss_pred CCCCCeeeecc----CceEEEEecCCccHhhhc----------------------------------------------c
Confidence 22 2222221 23799998875 222211 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEecCCC--------ceEEEeecccccc
Q 002343 605 SAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKS--------FCAKLSDMGISKR 657 (934)
Q Consensus 605 ~~~i~~i~~qIa~gL~yLHs~gIVHRDLKP~NILl~~d~~--------~~vKLsDFGlAk~ 657 (934)
.++...++.||+.+|.|||++|||||||||.|||++.++. ..+.|+||+-+..
T Consensus 204 ~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 204 VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 0123567899999999999999999999999999987652 2478999997754
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.5e-14 Score=158.79 Aligned_cols=160 Identities=23% Similarity=0.444 Sum_probs=109.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCc-eeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGK-MKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~-~~klp~ti~e~ 125 (934)
.++++++++.||+|+++|..||+++|++..++++.++ ...+...|+....||.||.++...|+ +.+.+++.+++
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p-----~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVP-----THVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC----------CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecc-----eEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 5789999999999999999999999999985544333 11223477877899999999886664 45899999999
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
+.++|+++.||.||+|++..+++++|++||+++.++...... ..|| . ...||
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~-----------~~~p------------~-----~~~v~ 134 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFAD-----------SLSP------------S-----TSLLY 134 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC--------------------------------------------------EE
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcc-----------cccc------------c-----CCEEE
Confidence 999999977999999999999999999999999887653211 1332 1 13799
Q ss_pred EEeeeEEEEEecCCCCceEEEEEeeeeccccccc
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQ 239 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t~~~~~a~~~~~ 239 (934)
++..|..|.++|+++|+++|+.++..+.+.....
T Consensus 135 ~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~ 168 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRELRWNATYFDYAASLPED 168 (369)
T ss_dssp EEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCC
T ss_pred EEecCCEEEEEECCCCCEEEeEecccccCccccC
Confidence 9999999999999999999999988887655443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=115.54 Aligned_cols=76 Identities=11% Similarity=-0.031 Sum_probs=56.2
Q ss_pred EEEeeeecccCcEEEEEEEEecCcEEEEEEeec---CChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 475 ~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~---~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
|.+...+|.|+.+.||+.. ..++.+++|+... .......+|...+...-.|.++.++++++.+.+..|+|||+++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~-~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLV-GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEE-CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEE-CCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 5567788889999999864 3478999999864 22234556665333333478888999999999999999998776
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.82 E-value=5.8e-09 Score=110.22 Aligned_cols=70 Identities=11% Similarity=-0.034 Sum_probs=49.1
Q ss_pred ecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCc--eeEEEEEEecCCeEEEEEecccC
Q 002343 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPN--IVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 481 IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpN--IV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.+.|+.+.||+....+|+.++||...........+|.. +++.+.+.+ +.+++++..+++..|+|||+++|
T Consensus 28 ~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~-~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 28 TIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAA-RLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp SCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHH-HHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred ccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHH-HHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 34666799998766667889999976543333455655 333333223 66789988888889999999987
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.8e-08 Score=109.31 Aligned_cols=136 Identities=13% Similarity=0.205 Sum_probs=90.1
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEee--cCC----hhHHHHHHHHHHHhCC--CCceeEEEEEEecC---CeEEEEE
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLV--KTH----HDVALKEIQNLIASDQ--HPNIVRWYGVESDQ---DFVYLSL 546 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~--~~~----~~~~~~Ei~~ll~~l~--HpNIV~l~g~~~~~---~~~yLVm 546 (934)
.+.|+.|.++.||+... .+..+++|+.. ... .....+|.. +++.+. +.++.++++++.+. +..|+||
T Consensus 43 ~~~l~~G~sn~~y~v~~-~~~~~vlr~~~~p~~~~~~~~~~~~~E~~-~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT-PGQTYVMRAKPGPKSKLLPSAHAIEREYR-VMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEEC-SSCEEEEECCCC----------CHHHHHH-HHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEE-CCceEEEEeCCCCCCCCCCcHHHHHHHHH-HHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 46789999999998644 35678888765 221 123445554 444443 56688999988876 4589999
Q ss_pred ecccCC-hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-
Q 002343 547 ERCTCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE- 624 (934)
Q Consensus 547 E~c~~s-L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs- 624 (934)
|+++|. +.+.. ...++..+...++.+++..|+.||+
T Consensus 121 e~v~G~~l~~~~------------------------------------------~~~l~~~~~~~~~~~l~~~La~LH~~ 158 (359)
T 3dxp_A 121 EFVSGRVLWDQS------------------------------------------LPGMSPAERTAIYDEMNRVIAAMHTV 158 (359)
T ss_dssp ECCCCBCCCCTT------------------------------------------CTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EecCCeecCCCc------------------------------------------cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 988763 22210 0123344555666677777777775
Q ss_pred ---------------------------------------------------------CCCcccCCCCCeEEEecCCCceE
Q 002343 625 ---------------------------------------------------------IGLIHRDLKPQNVLISKDKSFCA 647 (934)
Q Consensus 625 ---------------------------------------------------------~gIVHRDLKP~NILl~~d~~~~v 647 (934)
..++|+|++|.|||++.++.-.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~ 238 (359)
T 3dxp_A 159 DYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVL 238 (359)
T ss_dssp CTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEE
T ss_pred CchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEE
Confidence 35899999999999986653346
Q ss_pred EEeecccccc
Q 002343 648 KLSDMGISKR 657 (934)
Q Consensus 648 KLsDFGlAk~ 657 (934)
.|.||+.|..
T Consensus 239 ~viDwe~a~~ 248 (359)
T 3dxp_A 239 AVLDWELSTL 248 (359)
T ss_dssp EECCCTTCEE
T ss_pred EEECcccccc
Confidence 8999998864
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.51 E-value=3.4e-07 Score=102.19 Aligned_cols=155 Identities=14% Similarity=0.217 Sum_probs=109.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCC----------ceeeccccccCCCCccccccCCCCceeEEeccccCcee
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGR----------PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK 116 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~----------~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~ 116 (934)
.++.+++++-+|.|+++|..||+++|++..+. .+.+. .......+|+-. .||.||.++...|+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~v~~-~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG----VTVSGGHVYIGS-EKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE----EEEETTEEEEEE-TTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC----ceEeCCEEEEEc-CCCEEEEEECCCCCEE
Confidence 67889999999999999999999999999743 33222 011122456544 5789999988888763
Q ss_pred -ecccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 002343 117 -KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (934)
Q Consensus 117 -klp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (934)
+.+. +.-+..+|.+. ||.||+|.....++.+|++||+++-.+....... ... . .. .|...
T Consensus 127 W~~~~--~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~--~~~---~-~~----------~~~~~ 187 (376)
T 3q7m_A 127 WQTKV--AGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL--SLR---G-ES----------APTTA 187 (376)
T ss_dssp EEEEC--SSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-------C---C-CC----------CCEEE
T ss_pred EEEeC--CCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce--eec---C-CC----------CcEEE
Confidence 2222 22245788887 8899999999999999999999999887543210 000 0 00 01111
Q ss_pred ccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 196 NLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 196 ~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
+ ..||++-.+-.|.++|+++|+++|.....
T Consensus 188 ~-----~~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 188 F-----GAAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp T-----TEEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred C-----CEEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 1 27899988889999999999999997754
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=96.05 Aligned_cols=151 Identities=16% Similarity=0.246 Sum_probs=101.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecc--ccccCCCCccccccCCCCceeEEeccccCcee-ecccCH-
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY--QASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA- 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~--~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti- 122 (934)
.++.++|.+.||.|+++|..||+++|++..+.+..... ..+... +..+|+. ..+|.||.++...|+.. +.+...
T Consensus 142 ~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 142 SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVG-GDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEEC-CTTTEEEEEETTTCCEEEEEECCC-
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEE-cCCCEEEEEECCCCcEEEEEecccC
Confidence 35678888888888888888888888888765543100 000111 1234443 45788999988777654 333322
Q ss_pred ------HHH--HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccC
Q 002343 123 ------EEY--IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGV 194 (934)
Q Consensus 123 ------~e~--v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (934)
+.+ +..+|... ||.+|+|.....++.+|++||+++-....... .. |..
T Consensus 220 ~~~~~~~~~~~~~~~p~~~-~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~-------------~~----------~~~ 275 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVV-NGVVFALAYNGNLTALDLRSGQIMWKRELGSV-------------ND----------FIV 275 (376)
T ss_dssp ----------CCCCCCEEE-TTEEEEECTTSCEEEEETTTCCEEEEECCCCE-------------EE----------EEE
T ss_pred CCCcccccccccCCCcEEE-CCEEEEEecCcEEEEEECCCCcEEeeccCCCC-------------CC----------ceE
Confidence 222 55788877 89999999999999999999999987653211 11 111
Q ss_pred CccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 195 GNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 195 ~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
. ...||++-.+-.|.++|+++|+++|...
T Consensus 276 ~-----~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 276 D-----GNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp E-----TTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred E-----CCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 1 1378999888889999999999999865
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.30 E-value=9.7e-07 Score=96.33 Aligned_cols=71 Identities=8% Similarity=0.067 Sum_probs=43.3
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCC-hhHHHHHHHHHHHhC-CCCc--eeEEEEEEecCC---eEEEEEecccC
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-HDVALKEIQNLIASD-QHPN--IVRWYGVESDQD---FVYLSLERCTC 551 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~-~~~~~~Ei~~ll~~l-~HpN--IV~l~g~~~~~~---~~yLVmE~c~~ 551 (934)
+.++.|....||+.+ ..+++|+-.... .....+|.. +++.+ .+.. +.+.+....+.+ ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~-~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVN-ILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHH-HHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHH-HHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458999999999753 568888754331 233445554 44433 3322 455665554443 45899999887
Q ss_pred -Chh
Q 002343 552 -SLN 554 (934)
Q Consensus 552 -sL~ 554 (934)
+|.
T Consensus 101 ~~l~ 104 (304)
T 3sg8_A 101 VPLT 104 (304)
T ss_dssp EECC
T ss_pred eECC
Confidence 444
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.2e-06 Score=96.28 Aligned_cols=153 Identities=18% Similarity=0.167 Sum_probs=81.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCc-eeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP-IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~-i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
.+.++++++.||+|+++|..||+.+|++....+ ...... .-..+..+|+ ...||.||.++...|+.. --+..+.-
T Consensus 48 ~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp--~~~~~~~v~~-g~~dg~v~a~D~~tG~~~-w~~~~~~~ 123 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP--CRSSDGILYM-GKKQDIWYVIDLLTGEKQ-QTLSSAFA 123 (369)
T ss_dssp --CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS--CC-----CCC-CEEEEEEEEECCC--------------
T ss_pred CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc--eEecCCEEEE-EeCCCEEEEEECCCCcEE-EEecCCCc
Confidence 444666668999999999999999998864311 111111 1101223443 456889999988877662 23333444
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
+..+| .++.||+|+...+++++|++||+++-++......+ .+ +++... .+..+|
T Consensus 124 ~~~~p---~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~-----------~~--------~~~~~~----~~~~v~ 177 (369)
T 2hz6_A 124 DSLSP---STSLLYLGRTEYTITMYDTKTRELRWNATYFDYAA-----------SL--------PEDDVD----YKMSHF 177 (369)
T ss_dssp ------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECC-----------BC--------CCCCTT----CCCCEE
T ss_pred ccccc---cCCEEEEEecCCEEEEEECCCCCEEEeEecccccC-----------cc--------ccCCcc----ccceEE
Confidence 56677 68899999999999999999999877665322111 00 000000 112688
Q ss_pred EEeeeEEEEEecCCCCceEEEEEe
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
++-.+=.|.++|.++|+++|...+
T Consensus 178 ~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 178 VSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp EEETSCEEEEECTTTCCEEEEEEC
T ss_pred EECCCCEEEEEECCCCcEEEEecC
Confidence 888888999999999999998764
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.05 E-value=3.7e-05 Score=93.71 Aligned_cols=114 Identities=15% Similarity=0.195 Sum_probs=80.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecc--------ccccCCCCccccccCCCCceeEEeccccCcee-e
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY--------QASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~--------~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-k 117 (934)
.++.++|++-||.|+|+|..||+++|+++.+.+..... ..+.. ....+|+.+ .||.||.++...|++. +
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~-~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGV-LDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEEC-TTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEc-cCCEEEEEECCCCCEeee
Confidence 57889999999999999999999999998654421110 00001 112466654 5899999998888764 2
Q ss_pred cccC----HHHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEec
Q 002343 118 LSSS----AEEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 118 lp~t----i~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~ 163 (934)
.... ...-+..+|.+. ||.||+|.- ...++.+|++||+++-++..
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 1111 011345789886 888999874 57899999999999988764
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.8e-05 Score=96.35 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=82.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeec-ccc------ccCCCCccccccCCCCceeEEeccccCcee-ec
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSS-YQA------SFNSNASEFYLDVDEDWELYFHSKRFGKMK-KL 118 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~-~~~------~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-kl 118 (934)
.++.++|.+-+|.|+++|..||+++|++..+.+.... ++. ........+|+.. .|+.||.++...|++. +.
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~-~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA-WDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc-CCCEEEEEECCCCCEEeee
Confidence 6778899999999999999999999999976543211 000 0000122466654 5799999998888764 22
Q ss_pred ccCHH----HHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEecCC
Q 002343 119 SSSAE----EYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 119 p~ti~----e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
..... .-+..+|.+. +|.||+|.- ...++++|++||+++-++....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred cCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence 21100 1345788887 788999885 6889999999999999887643
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.1e-05 Score=92.96 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=81.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecc-ccc------cCCCCccccccCCCCceeEEeccccCcee-ec
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY-QAS------FNSNASEFYLDVDEDWELYFHSKRFGKMK-KL 118 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~-~~~------~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-kl 118 (934)
.++.++|++-+|.|+|+|..||+++|+++.+.+..... ... ......-+|+.+ .||.||.++...|++. +.
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT-LDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc-CCCEEEEEECCCCCEeeee
Confidence 67889999999999999999999999998655432110 000 000112366654 5799999998888764 22
Q ss_pred ccCH---HHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEec
Q 002343 119 SSSA---EEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 119 p~ti---~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~ 163 (934)
+..- ..-+..+|.+. +|.||+|.- ...++.+|++||+++-++..
T Consensus 144 ~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 2110 11244789887 888999874 47899999999999999875
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-05 Score=94.71 Aligned_cols=115 Identities=15% Similarity=0.222 Sum_probs=81.2
Q ss_pred CCCeEEEEee-CCeEEEEec-CCCeeeeEecCCCceee-cc-------ccccCCCCccccccCCCCceeEEeccccCcee
Q 002343 47 EPDVALVAAL-DGTIHLVDT-KLGKIRWSFGTGRPIYS-SY-------QASFNSNASEFYLDVDEDWELYFHSKRFGKMK 116 (934)
Q Consensus 47 ~~~~~lvstl-dG~~~~v~~-~sg~~~W~~~~~~~i~~-~~-------~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~ 116 (934)
.++.++|.+- +|.|+|+|. .||+++|++..+..... ++ ..+. .....+|+.+ .|+.||.++...|++.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~-~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLA-YGAGQIVKKQ-ANGHLLALDAKTGKIN 138 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCE-EETTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccE-EECCEEEEEe-CCCEEEEEECCCCCEE
Confidence 6778889998 999999999 99999999986543210 00 0001 1122466654 4899999998888764
Q ss_pred -ecccCH---HHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEecC
Q 002343 117 -KLSSSA---EEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 117 -klp~ti---~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~~ 164 (934)
+.+..- ..-+.++|.+. ||.||+|.- ...++++|++||+++-++...
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 195 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccC
Confidence 222111 01355889887 889999987 579999999999999988754
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=5.2e-05 Score=90.74 Aligned_cols=116 Identities=13% Similarity=0.093 Sum_probs=80.9
Q ss_pred CCCeEEEEee-CCeEEEEec-CCCeeeeEecCCCceeec-c-------ccccCC-CCcc----ccccCCCCceeEEeccc
Q 002343 47 EPDVALVAAL-DGTIHLVDT-KLGKIRWSFGTGRPIYSS-Y-------QASFNS-NASE----FYLDVDEDWELYFHSKR 111 (934)
Q Consensus 47 ~~~~~lvstl-dG~~~~v~~-~sg~~~W~~~~~~~i~~~-~-------~~~~~~-~~~~----~~l~~~~d~~ly~~~~~ 111 (934)
.++.++|.+- +|.|+|+|. .||+++|++..+...... . ..+.-. .... +|+.. .|+.||.++..
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t-~dg~l~AlDa~ 139 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ-LDGNVAALNAE 139 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-TTSEEEEEETT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-CCCEEEEEECC
Confidence 5778888988 999999999 999999999865432110 0 000110 1112 56554 57999999988
Q ss_pred cCcee---eccc-CHHHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEecC
Q 002343 112 FGKMK---KLSS-SAEEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 112 ~g~~~---klp~-ti~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~~ 164 (934)
.|++. +++- ....-+.++|.+. ||.||+|.- ...++.+|++||+++=++...
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 88764 2221 0011345789987 889999984 679999999999999888754
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.87 E-value=8.3e-05 Score=88.79 Aligned_cols=115 Identities=20% Similarity=0.216 Sum_probs=79.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecc------ccccCCCCccccccCCCCceeEEeccccCcee-ecc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY------QASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLS 119 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~------~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp 119 (934)
.++.++|++-++.|+|+|..||+++|++..+.+..... ..+. .....+|+.+ .|+.||.++...|++. +..
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a-~~~~~v~~~t-~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAA-IYGDKVFFGT-LDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCE-EETTEEEEEE-TTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccE-EECCEEEEEe-CCCEEEEEECCCCCEEeeec
Confidence 57788889986679999999999999998755432110 0000 0112366654 5799999998888764 222
Q ss_pred cCHH---HHHhcCCeeecCC-----ceEeece------eeEEEEEeCCCceEEEEEec
Q 002343 120 SSAE---EYIRRMPYISKDG-----GVTLGAM------KTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 120 ~ti~---e~v~~sP~~s~Dg-----~~~~G~k------~~t~f~vd~~tG~~~~~~~~ 163 (934)
..-+ .-+.++|++..|+ .||+|.. ...++.+|++||+++=+...
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC
Confidence 2111 1245799998441 8999974 77999999999999987654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00016 Score=79.03 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=45.5
Q ss_pred eeecccCcEEEEEEEEecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCC---ceeEEEEEEe-cCCeEEEEEecccC-C
Q 002343 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHP---NIVRWYGVES-DQDFVYLSLERCTC-S 552 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~Hp---NIV~l~g~~~-~~~~~yLVmE~c~~-s 552 (934)
+.++.|....||+. |+.++||+-..... ....+|.. ++..+.+. .|.+.+.+.. ..+..|+|||+++| .
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~-~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQ-LLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHH-HHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHH-HHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788999999985 56788887432211 23445555 55544431 3556666664 45678899999987 3
Q ss_pred hhh
Q 002343 553 LND 555 (934)
Q Consensus 553 L~d 555 (934)
+.+
T Consensus 100 l~~ 102 (306)
T 3tdw_A 100 LGE 102 (306)
T ss_dssp CHH
T ss_pred Cch
Confidence 443
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00016 Score=88.05 Aligned_cols=158 Identities=16% Similarity=0.206 Sum_probs=101.2
Q ss_pred CCCCCeEEEEeeCCe-------------------EEEEecCCCeeeeEecCCCc-----------eeeccccccCCCCcc
Q 002343 45 PPEPDVALVAALDGT-------------------IHLVDTKLGKIRWSFGTGRP-----------IYSSYQASFNSNASE 94 (934)
Q Consensus 45 ~~~~~~~lvstldG~-------------------~~~v~~~sg~~~W~~~~~~~-----------i~~~~~~~~~~~~~~ 94 (934)
+++.+++.+.+-||+ |+|+|..||+++|++...+- +..... .+.....
T Consensus 243 d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~--~~G~~~~ 320 (689)
T 1yiq_A 243 DPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELP--IDGKPRK 320 (689)
T ss_dssp ETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE--ETTEEEE
T ss_pred cCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeec--cCCcEEE
Confidence 346789999999985 99999999999999986431 111100 0110112
Q ss_pred ccccCCCCceeEEeccccCcee-ecccC-----------------HHHHH----h----------------cCCeeec-C
Q 002343 95 FYLDVDEDWELYFHSKRFGKMK-KLSSS-----------------AEEYI----R----------------RMPYISK-D 135 (934)
Q Consensus 95 ~~l~~~~d~~ly~~~~~~g~~~-klp~t-----------------i~e~v----~----------------~sP~~s~-D 135 (934)
.++-..++|.||.++...|++. +.++. .++.. . .+..+++ .
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 3444568999999998888763 22211 12211 0 0124443 3
Q ss_pred CceEeece---------------------------------------------eeEEEEEeCCCceEEEEEecCCCCCCC
Q 002343 136 GGVTLGAM---------------------------------------------KTSVFLVDVKSGRVVDNYVLDFSASTP 170 (934)
Q Consensus 136 g~~~~G~k---------------------------------------------~~t~f~vd~~tG~~~~~~~~~~~~~~~ 170 (934)
|++|++.- ..++.++|++||+++-++.......
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~-- 478 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN-- 478 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC--
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc--
Confidence 67777532 3679999999999999887543210
Q ss_pred CCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEe
Q 002343 171 GFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
. . .+..+ ..+||++-.|-.|.++|.++|+++|....
T Consensus 479 ---~-----g-------~~~ta--------gglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 479 ---G-----G-------TLSTA--------GNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp ---C-----C-------EEEET--------TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ---C-----c-------cceEC--------CCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 0 0 01111 13899999999999999999999997653
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00018 Score=87.55 Aligned_cols=159 Identities=16% Similarity=0.164 Sum_probs=103.5
Q ss_pred CCCCCeEEEEeeCC-------------------eEEEEecCCCeeeeEecCCCc-----------eeeccccccCCCCcc
Q 002343 45 PPEPDVALVAALDG-------------------TIHLVDTKLGKIRWSFGTGRP-----------IYSSYQASFNSNASE 94 (934)
Q Consensus 45 ~~~~~~~lvstldG-------------------~~~~v~~~sg~~~W~~~~~~~-----------i~~~~~~~~~~~~~~ 94 (934)
+++.+++++.+-+| +|+++|..||+++|++...+- +..... .+.....
T Consensus 251 d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~--~dG~~~~ 328 (677)
T 1kb0_A 251 DAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIK--IAGKPRK 328 (677)
T ss_dssp ETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEE--ETTEEEE
T ss_pred cCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecc--cCCcEee
Confidence 34688999999886 599999999999999986432 111100 0110013
Q ss_pred ccccCCCCceeEEeccccCcee-ecccCH----------------HHHH------h-----------cCCeeecC-CceE
Q 002343 95 FYLDVDEDWELYFHSKRFGKMK-KLSSSA----------------EEYI------R-----------RMPYISKD-GGVT 139 (934)
Q Consensus 95 ~~l~~~~d~~ly~~~~~~g~~~-klp~ti----------------~e~v------~-----------~sP~~s~D-g~~~ 139 (934)
.++-..++|.||.++...|++. +.++.- +++. - .++.+++| |.+|
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~y 408 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVY 408 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEE
Confidence 3445568999999998888663 333221 0000 0 13355654 7888
Q ss_pred eece-------------------------------------------eeEEEEEeCCCceEEEEEecCCCCCCCCCCCCC
Q 002343 140 LGAM-------------------------------------------KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDE 176 (934)
Q Consensus 140 ~G~k-------------------------------------------~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~ 176 (934)
++.. ..++.++|++||+++-++....... .
T Consensus 409 v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~-----~-- 481 (677)
T 1kb0_A 409 LPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWN-----G-- 481 (677)
T ss_dssp EEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCC-----C--
T ss_pred EeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCc-----C--
Confidence 8643 2689999999999999887543110 0
Q ss_pred CCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 177 NKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
. + ... ...++|++-.|-.|..+|.++|+++|.+...
T Consensus 482 ---g-~------~~~--------~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 482 ---G-T------LTT--------AGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp ---C-E------EEE--------TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ---c-c------eEe--------CCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 0 0 000 1138999988999999999999999998765
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00027 Score=84.62 Aligned_cols=165 Identities=12% Similarity=0.091 Sum_probs=101.2
Q ss_pred EEEEeeCCeEEEEecCCCeeeeEecCCC-----ceeeccccccCCCCccccccCC-----CCceeEEeccccCcee-ecc
Q 002343 51 ALVAALDGTIHLVDTKLGKIRWSFGTGR-----PIYSSYQASFNSNASEFYLDVD-----EDWELYFHSKRFGKMK-KLS 119 (934)
Q Consensus 51 ~lvstldG~~~~v~~~sg~~~W~~~~~~-----~i~~~~~~~~~~~~~~~~l~~~-----~d~~ly~~~~~~g~~~-klp 119 (934)
++|.+.||.|+|+|..||+++|++..+. .+.++ . .- .+..+|+-.. .||.||.++...|++. +..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ss-P--~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIA-P--YV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSC-C--EE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecC-C--EE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 8899999999999999999999998654 22221 0 10 1123555442 5899999999888775 333
Q ss_pred cCHHHHH------------------------------h------cCCeee-cCCceEeecee----------------eE
Q 002343 120 SSAEEYI------------------------------R------RMPYIS-KDGGVTLGAMK----------------TS 146 (934)
Q Consensus 120 ~ti~e~v------------------------------~------~sP~~s-~Dg~~~~G~k~----------------~t 146 (934)
..-+..- . .+|.+. .+|.||+|.-. ++
T Consensus 200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence 3322210 0 123332 57899998754 58
Q ss_pred EEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEE
Q 002343 147 VFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWN 226 (934)
Q Consensus 147 ~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN 226 (934)
++.+|++||+++-.+.....+ .|.=+.. ..+.+++-...+.. ...+++.+-.+=.|-.+|.++|+++|.
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d----~wd~d~~------~~p~l~d~~~~~G~-~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHD----EWDYAGV------NVMMLSEQKDKDGK-ARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTC----SSCCCCC------CCCEEEEEECTTSC-EEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCceeeEeecCCCc----cccccCC------CccEEEeccccCCc-EEEEEEEECCCcEEEEEECCCCCEeec
Confidence 999999999999988764211 1111111 00111111000110 113566665566789999999999998
Q ss_pred EEee
Q 002343 227 VAYA 230 (934)
Q Consensus 227 ~t~~ 230 (934)
..+.
T Consensus 349 ~~~~ 352 (599)
T 1w6s_A 349 NKLD 352 (599)
T ss_dssp EESS
T ss_pred cccc
Confidence 7654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=78.52 Aligned_cols=155 Identities=11% Similarity=0.165 Sum_probs=94.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCc--eeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP--IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~--i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
+..++++..-||+|+++|+.||++.|++..+.. .... + -.++..+++ ..+..+|..+. .|++. ++.. +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~-~---~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~--~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSV-A---ATKAGEILF--SYSKGAKMITR-DGRELWNIAA--P 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEE-E---ECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC--C
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCe-E---ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC--C
Confidence 356788888999999999999999999997642 2221 1 111223444 23566777776 56443 2221 1
Q ss_pred H-HHhcCCeeecCCceEee-ce-eeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccc
Q 002343 124 E-YIRRMPYISKDGGVTLG-AM-KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (934)
Q Consensus 124 e-~v~~sP~~s~Dg~~~~G-~k-~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (934)
+ .--.+.-+++||-++++ +. ...+++||+ +|+++.++....... ..... ...+.+.. +.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~--------~~~~~-----~~~v~~~~-~G--- 136 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE--------RPHAQ-----FRQINKNK-KG--- 136 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS--------SGGGS-----CSCCEECT-TS---
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC--------ccccc-----ccCceECC-CC---
Confidence 0 00123456778855554 44 678999998 899999987643100 00000 00111111 11
Q ss_pred cceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 201 RQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 201 ~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
..|+....+-+|..+|++ |+++|.+...
T Consensus 137 -~~lv~~~~~~~v~~~d~~-G~~~w~~~~~ 164 (276)
T 3no2_A 137 -NYLVPLFATSEVREIAPN-GQLLNSVKLS 164 (276)
T ss_dssp -CEEEEETTTTEEEEECTT-SCEEEEEECS
T ss_pred -CEEEEecCCCEEEEECCC-CCEEEEEECC
Confidence 256666668899999998 9999998764
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00021 Score=86.66 Aligned_cols=173 Identities=14% Similarity=0.105 Sum_probs=104.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCce-eeccccccCCCCccccccCC-----CCceeEEeccccCcee-ecc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPI-YSSYQASFNSNASEFYLDVD-----EDWELYFHSKRFGKMK-KLS 119 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i-~~~~~~~~~~~~~~~~l~~~-----~d~~ly~~~~~~g~~~-klp 119 (934)
.++.++|.+.||.|+++|..||+++|++..+.+- ...........+..+|+-+. .||.||.++...|++. +..
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4678999999999999999999999999874321 00000000011223555543 3799999998888764 221
Q ss_pred ---------cCHHHHHhc--------------------CCeeec-CCceEeeceee-------------------EEEEE
Q 002343 120 ---------SSAEEYIRR--------------------MPYISK-DGGVTLGAMKT-------------------SVFLV 150 (934)
Q Consensus 120 ---------~ti~e~v~~--------------------sP~~s~-Dg~~~~G~k~~-------------------t~f~v 150 (934)
+..+.++.. +|.+.. +|.||+|.-.. +++.+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 122233222 345543 57999997654 59999
Q ss_pred eCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 151 DVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 151 d~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
|++||+++-.+...... .|.-+. +. ...+.+-. .+. +....|+.+-.+=.|-.+|.++|+++|...+.
T Consensus 276 D~~tG~~~W~~~~~~~~----~wd~~~----~~--~~~~~d~~-~~G-~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 343 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGD----SWDFTA----TQ--QITLAELN-IDG-KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFG 343 (668)
T ss_dssp CTTTCCEEEEEESSTTC----CSCCCC----CS--CEEEEEEE-ETT-EEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred cCCCCceeeEeecCCCc----cccccC----CC--CcEEEEec-cCC-cEEEEEEEECCCCEEEEEECCCCCEecccccc
Confidence 99999999998753211 111111 00 00011000 011 01125777777778899999999999987665
Q ss_pred e
Q 002343 231 D 231 (934)
Q Consensus 231 ~ 231 (934)
.
T Consensus 344 ~ 344 (668)
T 1kv9_A 344 K 344 (668)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00019 Score=85.50 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=89.3
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCC--------------ceeeccccccCCCC---------------ccccccCC
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGR--------------PIYSSYQASFNSNA---------------SEFYLDVD 100 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~--------------~i~~~~~~~~~~~~---------------~~~~l~~~ 100 (934)
++++++-||.||++|..||+++|++..++ |+..+...+....+ +..| +|
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~--dp 395 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSY--DP 395 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEE--ET
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceE--CC
Confidence 45668889999999999999999987654 33321100000000 0122 46
Q ss_pred CCceeEEeccccCceeecccCHHHHHhcCCeeecCCceEeec--------------eeeEEEEEeCCCceEEEEEecCCC
Q 002343 101 EDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGA--------------MKTSVFLVDVKSGRVVDNYVLDFS 166 (934)
Q Consensus 101 ~d~~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg~~~~G~--------------k~~t~f~vd~~tG~~~~~~~~~~~ 166 (934)
+.+-+|+-..+. ++++. ..+..-.+|.+|+|. ....++++|++||+++-++.....
T Consensus 396 ~~g~~yv~~~~~------~~~~~----~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~ 465 (571)
T 2ad6_A 396 ESRTLYAGLNHI------CMDWE----PFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA 465 (571)
T ss_dssp TTTEEEEEEECE------EEEEE----ECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC
T ss_pred CCCEEEEEchhc------ccccc----ccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC
Confidence 677777743321 11111 111112467777773 346899999999999988875431
Q ss_pred CCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 167 ASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
.. ..+ .+ .. ..+||++-.|-.|.++|.++|+++|.....
T Consensus 466 ~~-----------~~~------~~---t~-----gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 466 AW-----------GGT------LY---TK-----GGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CC-----------SBC------EE---ET-----TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cc-----------cee------EE---EC-----CCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 10 000 00 01 138999988999999999999999987654
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00021 Score=77.01 Aligned_cols=146 Identities=23% Similarity=0.435 Sum_probs=98.0
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHHh
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~ 127 (934)
++.+.|+|.+|.|+++|.. |+..|++..+..+..+ ..-..+..+|+- ..++.||..+.. |... -.++.+.-+-
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~---~~~~~~g~l~vg-t~~~~l~~~d~~-g~~~-~~~~~~~~~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYAT---PIVSEDGTIYVG-SNDNYLYAINPD-GTEK-WRFKTNDAIT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSC---CEECTTSCEEEE-CTTSEEEEECTT-SCEE-EEEECSSCCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeee---eEEcCCCEEEEE-cCCCEEEEECCC-CCEe-EEEecCCCce
Confidence 6778889999999999999 9999999865554222 011212235553 357889998877 6542 1222222345
Q ss_pred cCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEE
Q 002343 128 RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM 207 (934)
Q Consensus 128 ~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 207 (934)
.+|+..+||.+|+|. ..++.+| .+|+.+..+....... .++ .... +..||++
T Consensus 180 ~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~-----------~~~----------~~~~----~g~l~v~ 231 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTV-----------TRP----------AISE----DGTIYVT 231 (330)
T ss_dssp SCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCC-----------SCC----------EECT----TSCEEEE
T ss_pred eeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcce-----------ece----------EECC----CCeEEEE
Confidence 788998899999999 8999999 8999888776432100 111 0111 1268888
Q ss_pred eeeEEEEEecCCCCceEEEEEe
Q 002343 208 RTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 208 RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
-.+-.|..+|+ +|...|..+.
T Consensus 232 t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 232 SLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp ETTTEEEEECT-TSCEEEEEEC
T ss_pred cCCCeEEEECC-CCCEeEEeeC
Confidence 76667888886 7888898664
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00017 Score=77.86 Aligned_cols=146 Identities=15% Similarity=0.232 Sum_probs=98.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
.++.+.|+|-||.|+++| .+|+..|++..+..+..+ ..-+.+..+|+-..+ ||..+. .|.. .-.+..+.-+
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~---~~~~~~g~l~v~t~~---l~~~d~-~g~~-~~~~~~~~~~ 99 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECR---PSIGKDGTIYFGSDK---VYAINP-DGTE-KWRFDTKKAI 99 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEEC---CEETTTTEECCSSCE---EEEECC-CGGG-GGGSCC----
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccc---eEEecCCcEEEecCc---EEEECC-CCcE-EEEEECCCCc
Confidence 577888899999999999 999999998865444222 111222346654433 888865 4443 3344455556
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
..+|.+. ||.+|+|.....++.+|++ |+.+..+....... .++ ... .+..||+
T Consensus 100 ~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~-----------~~~----------~~~----~~g~l~v 152 (330)
T 3hxj_A 100 VSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIY-----------ATP----------IVS----EDGTIYV 152 (330)
T ss_dssp -CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCC-----------SCC----------EEC----TTSCEEE
T ss_pred ccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCcee-----------eee----------EEc----CCCEEEE
Confidence 7888888 9999999988999999999 99888876432110 111 001 0126888
Q ss_pred EeeeEEEEEecCCCCceEEEEEe
Q 002343 207 MRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 207 ~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
+-.+-.|..+|++ |+..|..+.
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEEC
T ss_pred EcCCCEEEEECCC-CCEeEEEec
Confidence 8777899999998 999998874
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0004 Score=73.69 Aligned_cols=75 Identities=11% Similarity=-0.060 Sum_probs=48.1
Q ss_pred ecccCcE-EEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC-Chhh
Q 002343 481 IAKGSNG-TVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLND 555 (934)
Q Consensus 481 IG~GsfG-tVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~-sL~d 555 (934)
+..|..| +||+... ..+..+.+|+-.........+|...+...-.+--+.++++++.+.+..|+|||+++| ++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4445444 6886433 346789999865443334455655333333344577888999999999999999887 3443
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00045 Score=82.42 Aligned_cols=145 Identities=19% Similarity=0.151 Sum_probs=88.4
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCC--------------ceeecccccc------CCCCcccccc-----------
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGR--------------PIYSSYQASF------NSNASEFYLD----------- 98 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~--------------~i~~~~~~~~------~~~~~~~~l~----------- 98 (934)
++++.+-||.||++|..||+++|++..++ |++.+...+. ...+.....|
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 417 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPM 417 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCC
T ss_pred EEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCc
Confidence 67778899999999999999999998765 2221110000 0000000111
Q ss_pred --CCCCceeEEeccccCceeecccCHHHHHhcCCeeecCCceEeece----------eeEEEEEeCCCceEEEEEecCCC
Q 002343 99 --VDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAM----------KTSVFLVDVKSGRVVDNYVLDFS 166 (934)
Q Consensus 99 --~~~d~~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg~~~~G~k----------~~t~f~vd~~tG~~~~~~~~~~~ 166 (934)
+|+.+-+|+-..+ +++.+. ..+..-.+|..|+|.. ..+++++|++||+++-++.....
T Consensus 418 a~dp~~g~~yv~~~~------~~~~~~----~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~ 487 (582)
T 1flg_A 418 AYSQDTGLFYVPANH------WKEDYW----TEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP 487 (582)
T ss_dssp EECTTTCCEEEEEEC------EEEEEE----ECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC
T ss_pred eECCCCCEEEEechh------cceeee----cccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC
Confidence 5666777774322 121111 0111113677777642 46899999999999988765321
Q ss_pred CCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEe
Q 002343 167 ASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
.. ... ++. + ..+||++-.|..|.++|.++|+++|....
T Consensus 488 ~~----------~g~-------~~t---a-----gglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 488 LW----------AGV-------LAT---A-----GNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CC----------SCC-------EEE---T-----TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred Cc----------ccc-------eEe---C-----CCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 00 000 011 1 13899999999999999999999998765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00044 Score=74.21 Aligned_cols=152 Identities=10% Similarity=0.055 Sum_probs=91.9
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCC--CceeeccccccCCCCccccc-cCCCCceeEEeccccCce-eecccCHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG--RPIYSSYQASFNSNASEFYL-DVDEDWELYFHSKRFGKM-KKLSSSAE 123 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~--~~i~~~~~~~~~~~~~~~~l-~~~~d~~ly~~~~~~g~~-~klp~ti~ 123 (934)
++-+|| +-+++++++|+ +|++.|+++.+ ..+++. +. .. +...++ ...+++.++..+. .|++ .+.++.-.
T Consensus 47 dG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~-~~-~~--dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~ 119 (276)
T 3no2_A 47 AGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTA-RI-LP--DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG 119 (276)
T ss_dssp TSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEE-EE-CT--TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS
T ss_pred CCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccccc-EE-CC--CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC
Confidence 344555 56999999999 99999999975 234332 11 11 222333 3333778887764 4543 33332110
Q ss_pred ---HHH-hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccc
Q 002343 124 ---EYI-RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLK 198 (934)
Q Consensus 124 ---e~v-~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (934)
... ...-.++.|| ++++......++++|++ |+++.++....... .++ -..+.
T Consensus 120 ~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~-----------~~~----------~~~~g- 176 (276)
T 3no2_A 120 IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPF-----------SSA----------FLDNG- 176 (276)
T ss_dssp CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCC-----------EEE----------ECTTS-
T ss_pred CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCcc-----------cee----------EcCCC-
Confidence 000 0011345666 56677778899999999 99999998643211 111 01111
Q ss_pred cccceEEEEeeeEEEEEecCCCCceEEEEEeeee
Q 002343 199 RIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 199 ~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
.+|+.+....+|..+|+++|+++|.++-.+.
T Consensus 177 ---~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 177 ---DCLVACGDAHCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ---CEEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred ---CEEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence 2455555566899999999999999985443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0015 Score=70.67 Aligned_cols=157 Identities=11% Similarity=0.119 Sum_probs=100.7
Q ss_pred CCCeEEEEee-------CCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-eec
Q 002343 47 EPDVALVAAL-------DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKL 118 (934)
Q Consensus 47 ~~~~~lvstl-------dG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~kl 118 (934)
....++|++- ||+|+.+|..+|++.|++..+...... + ...+...+|+-+..|+.++..+...|+. ..+
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--~-~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 127 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGA--T-INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRL 127 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSE--E-EETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceE--E-ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEE
Confidence 4567777663 679999999999999999865433221 0 1111224777888889999988766655 344
Q ss_pred ccCHH---HH----HhcCCeeecCCc-eEeec--eeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccc
Q 002343 119 SSSAE---EY----IRRMPYISKDGG-VTLGA--MKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEE 188 (934)
Q Consensus 119 p~ti~---e~----v~~sP~~s~Dg~-~~~G~--k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (934)
+..-. +. -...-.+|+||- +|++. ...+++++|++||+.++++...+... ..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~~~~------- 191 (353)
T 3vgz_A 128 VLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS---------TGLA------- 191 (353)
T ss_dssp ESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC---------CCCE-------
T ss_pred ecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc---------ceEE-------
Confidence 43210 00 002246888874 67765 46779999999999999886322111 0010
Q ss_pred cccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 189 LVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 189 ~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
+.|. ...||+.-.+=.|..+|..+++..|.+...
T Consensus 192 -~s~d-------g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 192 -LDSE-------GKRLYTTNADGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp -EETT-------TTEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred -ECCC-------CCEEEEEcCCCeEEEEECCCCeEEEEEEcC
Confidence 1110 126777766667888999999999988763
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=71.83 Aligned_cols=45 Identities=18% Similarity=0.170 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHH-------------CCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 611 VTRDIVSGLSHLHE-------------IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 611 i~~qIa~gL~yLHs-------------~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
+..++..++++|++ ..++|+|++|.|||++.++ .+.|+||+.+..
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~--~~~lIDfe~a~~ 252 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENE--QIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGG--CEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCC--cEEEEehhhccc
Confidence 33445556777753 5799999999999996554 389999998753
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0066 Score=64.78 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=99.1
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCC----ceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGR----PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~----~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
+++++++-||+|+.+|..+|++.+++..+. |.... ...+...+|+-+..++.++..+...|+.. +++..-+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~----~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPM----VAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEE----ECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceE----EcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 467888899999999999999999998544 32221 12122246778888999999887666543 4554320
Q ss_pred HH---HhcCCeeecCC-ceEeec------------eeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcc
Q 002343 124 EY---IRRMPYISKDG-GVTLGA------------MKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYE 187 (934)
Q Consensus 124 e~---v~~sP~~s~Dg-~~~~G~------------k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (934)
.. -.....+|+|| .+|++. ....++++|..||+.++.+....... .++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~----------~~~------ 141 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQIT----------MLA------ 141 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCC----------CEE------
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcc----------eeE------
Confidence 00 01356788899 788876 45899999999999998886532100 010
Q ss_pred ccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 188 ELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 188 ~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
+.|. . ..||++ +-.|..+|..+++..+.+...
T Consensus 142 --~s~d---g----~~l~~~--~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 142 --WARD---G----SKLYGL--GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp --ECTT---S----SCEEEE--SSSEEEEETTTTEEEEEECST
T ss_pred --ECCC---C----CEEEEe--CCeEEEEECCCCcEeeeeecc
Confidence 1111 1 156776 446888899888887665543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0025 Score=71.76 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=42.6
Q ss_pred eeeecccCcEEEEEEEE-ecCcEEEEEEeecCC----------hhHHHHHHHHHHHhC-C--CCceeEEEEEEecCCeEE
Q 002343 478 NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH----------HDVALKEIQNLIASD-Q--HPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~----------~~~~~~Ei~~ll~~l-~--HpNIV~l~g~~~~~~~~y 543 (934)
.+.||.|..+.||++.. ..++.|+||...... .+....|.. ++..+ . ...+.+++.+. .+..+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~-~L~~l~~~~~~~vP~~~~~d--~~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESS-ALIRQGEHVPHLVPRVFYSD--TEMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHH-HHHHHHTTCGGGSCCEEEEE--TTTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHH-HHHHhhhhCCCCcCeEEEEc--CCccE
Confidence 45799999999998743 357899999764211 123345554 33322 1 23445666543 44568
Q ss_pred EEEecccC
Q 002343 544 LSLERCTC 551 (934)
Q Consensus 544 LVmE~c~~ 551 (934)
+|||++++
T Consensus 112 lvmE~l~g 119 (397)
T 2olc_A 112 TVMEDLSH 119 (397)
T ss_dssp EEECCCTT
T ss_pred EEEEeCCC
Confidence 99999976
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0018 Score=71.68 Aligned_cols=73 Identities=5% Similarity=0.052 Sum_probs=46.2
Q ss_pred eeee-cccCcEEEEEEEEe-------cCcEEEEEEeecCC------hhHHHHHHHHHHHhC-C--CCceeEEEEEEecC-
Q 002343 478 NKEI-AKGSNGTVVLEGNY-------EGRSVAVKRLVKTH------HDVALKEIQNLIASD-Q--HPNIVRWYGVESDQ- 539 (934)
Q Consensus 478 ~~~I-G~GsfGtVy~~~~~-------~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l-~--HpNIV~l~g~~~~~- 539 (934)
.+.| +.|....+|+.... +++.+++|+-.... .....+|.. +++.+ . .-.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~-~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFE-VIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHH-HHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHH-HHHHHhhcCCCCCCcEEEEccCCC
Confidence 4567 88999999986443 26788899764322 123444544 22222 1 23567778777665
Q ss_pred --CeEEEEEecccC
Q 002343 540 --DFVYLSLERCTC 551 (934)
Q Consensus 540 --~~~yLVmE~c~~ 551 (934)
+..|+|||+++|
T Consensus 104 ~~g~~~~v~e~l~G 117 (357)
T 3ats_A 104 VLGTPFFLMDYVEG 117 (357)
T ss_dssp TTSSCEEEEECCCC
T ss_pred ccCCceEEEEecCC
Confidence 457899999987
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0037 Score=71.19 Aligned_cols=71 Identities=10% Similarity=0.092 Sum_probs=45.2
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEee-------cC-----ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLV-------KT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~-------~~-----~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.+.||.|..+.||+.. .+++.++||... .. .......|+..++....+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~-~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVV-GSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEE-CSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEE-cCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 4578999999999864 357789999422 11 1112233444344333345677777765 4667999
Q ss_pred Eecc-cC
Q 002343 546 LERC-TC 551 (934)
Q Consensus 546 mE~c-~~ 551 (934)
||++ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.012 Score=62.63 Aligned_cols=152 Identities=10% Similarity=-0.029 Sum_probs=92.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCc-----------------------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDW----------------------- 103 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~----------------------- 103 (934)
....++++ +|.|+.+|..+|++.+.+..+.... +. +...+ ...+|.....++
T Consensus 145 dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~-~~-~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 145 DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA-ET-YAQPD-VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT-TT-BCCCB-CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCC-Cc-eeCCC-ccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 45556655 8999999999999999887654111 10 00111 112333333332
Q ss_pred eeEEeccccCceeecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCcccc
Q 002343 104 ELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVP 182 (934)
Q Consensus 104 ~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (934)
.++..+...|.+..+++...+-...+-.+|+|| .+|++ ..+++++|.+||+.++.+....... .++
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~----------~~~- 286 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYY----------SVN- 286 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCC----------EEE-
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCcee----------eEE-
Confidence 456766666665444432211111224678898 57777 6899999999999999887432110 011
Q ss_pred CCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 183 VDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
+.| + ...||++-.+-.|..+|.+++++.+.+...
T Consensus 287 -------~s~---d----g~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 287 -------VST---D----GSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp -------ECT---T----SCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred -------ECC---C----CCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 111 1 126888877889999999999998877654
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.031 Score=60.15 Aligned_cols=162 Identities=10% Similarity=0.161 Sum_probs=100.2
Q ss_pred CCCeEEEE-eeCCeEEEEecCCCeeeeEecCCCcee-------eccccccCCCCccccccC-CCCceeEEeccccCcee-
Q 002343 47 EPDVALVA-ALDGTIHLVDTKLGKIRWSFGTGRPIY-------SSYQASFNSNASEFYLDV-DEDWELYFHSKRFGKMK- 116 (934)
Q Consensus 47 ~~~~~lvs-tldG~~~~v~~~sg~~~W~~~~~~~i~-------~~~~~~~~~~~~~~~l~~-~~d~~ly~~~~~~g~~~- 116 (934)
....++|+ ..||+|+.+|..+|++.|++..+.... .+.......+...+|+-+ .+|+.+|..+...++..
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 44545555 457999999999999999998754221 000001111122366666 56888999887666443
Q ss_pred ecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 002343 117 KLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (934)
Q Consensus 117 klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (934)
.++..-. -......++|| .+|++.....++++|..||+.+.++....... .. . + ..-.+.|.
T Consensus 179 ~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--------~~-~-~---~~~~~s~d-- 241 (353)
T 3vgz_A 179 AIQNTGK--MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK--------EH-F-F---INISLDTA-- 241 (353)
T ss_dssp EECCCCT--TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS--------CC-C-E---EEEEEETT--
T ss_pred EecCCCC--ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC--------Cc-c-c---ceEEECCC--
Confidence 3441110 02456788898 48888888899999999999999987532110 00 0 0 00011111
Q ss_pred ccccccceEEEEeee-EEEEEecCCCCceEEEEEee
Q 002343 196 NLKRIRQLVYIMRTD-YVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 196 ~~~~~~~~i~i~Rtd-Y~v~~~~~~s~~~~WN~t~~ 230 (934)
...||++-.+ -.|..+|.+++++.+.+...
T Consensus 242 -----g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 242 -----RQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp -----TTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred -----CCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 1256776544 78899999999998888754
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0041 Score=68.81 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=71.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceee----cccccc-C-----CCCccccccCCCCceeEEeccccCcee
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYS----SYQASF-N-----SNASEFYLDVDEDWELYFHSKRFGKMK 116 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~----~~~~~~-~-----~~~~~~~l~~~~d~~ly~~~~~~g~~~ 116 (934)
.++++++.+-||+|+++|..||+++|++..+.|.-. +.-.+. . ....++|+- ..+..+++++ +.|.+=
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig-~~~y~v~~~~-~sG~~W 187 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIG-KTIFELGIHS-YDGASY 187 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEE-EEEEECEECC-TTSCCC
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEe-cceEEEEEEC-CCCCeE
Confidence 578899999999999999999999999998755310 000000 0 111234432 2334555555 334210
Q ss_pred e------cccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEE
Q 002343 117 K------LSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVD 159 (934)
Q Consensus 117 k------lp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~ 159 (934)
+ -+.++..=+.+++-++.||.+|+|+....++.+|+.||+.+-
T Consensus 188 ~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 188 NVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred EEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 1 122233334566777889999999999999999999999875
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.026 Score=61.96 Aligned_cols=153 Identities=12% Similarity=0.101 Sum_probs=99.8
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
....++++. -||+|+.+|..+|++.+++..+..+.... ...+...+|+-+.+|+.+++.+...|...+.--. ..-
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~---~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~ 117 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA---VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKS 117 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE---ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred CCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceE---ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCC
Confidence 455565444 89999999999999999999776554321 1111224666777889999988766654322111 111
Q ss_pred HhcCCeeecCCc-e-EeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccce
Q 002343 126 IRRMPYISKDGG-V-TLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (934)
Q Consensus 126 v~~sP~~s~Dg~-~-~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (934)
-.+.+.++||- + ++|+...++++.|..||+.+.++....... .++ +.|. . ..
T Consensus 118 -~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~----------~~~--------~~~d---g----~~ 171 (391)
T 1l0q_A 118 -PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPK----------GIA--------VTPD---G----TK 171 (391)
T ss_dssp -EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEE----------EEE--------ECTT---S----SE
T ss_pred -cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcc----------eEE--------ECCC---C----CE
Confidence 14567888983 4 688889999999999999999987532100 011 1111 0 14
Q ss_pred EE-EEeeeEEEEEecCCCCceEEEEEe
Q 002343 204 VY-IMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 204 i~-i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
|| .+..+-.|..+|..+++....+..
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~ 198 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKV 198 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEec
Confidence 44 456677889999999888766654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.062 Score=58.44 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=70.2
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHHHh
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~v~ 127 (934)
.+.+++.-+|+|..+|..||++.+++..+.... ..-...+ ..+|+-+..+++++..+...+++. +++.--..--.
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~---~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR---YIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMES 130 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE---EEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc---EEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccC
Confidence 344444457999999999999999996432221 1111111 257777767888888887666554 33321100000
Q ss_pred cCC---eeecCCceEeec--eeeEEEEEeCCCceEEEEEec
Q 002343 128 RMP---YISKDGGVTLGA--MKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 128 ~sP---~~s~Dg~~~~G~--k~~t~f~vd~~tG~~~~~~~~ 163 (934)
..| ++ .+|-+|+.. ..+++.++|++||+++++...
T Consensus 131 ~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 131 GSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp CBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 022 23 578888886 478999999999999998865
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.037 Score=60.72 Aligned_cols=153 Identities=12% Similarity=0.169 Sum_probs=101.4
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
....++++. .||+|+.+|..+|+..+.+..+..+.... ...+...+|+-+..|+.+++.+...|... .++.. .
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~---~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~ 158 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLA---LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--R 158 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEE---ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--S
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEE---ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC--C
Confidence 455565555 57999999999999999998766554321 11112246677888999999987655443 22221 1
Q ss_pred HHhcCCeeecCC-ce-EeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 125 YIRRMPYISKDG-GV-TLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~-~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
-+ .+.+.++|| .+ ++|....++++.|.++|+.+..+....... .+ .+.|. ..
T Consensus 159 ~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~----------~~--------~~~~~-------g~ 212 (391)
T 1l0q_A 159 SP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPS----------GI--------AVNPE-------GT 212 (391)
T ss_dssp SE-EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEE----------EE--------EECTT-------SS
T ss_pred Cc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCcc----------ce--------EECCC-------CC
Confidence 11 456788898 34 577888899999999999998876432100 01 01111 12
Q ss_pred eEEEEe---eeEEEEEecCCCCceEEEEEee
Q 002343 203 LVYIMR---TDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 203 ~i~i~R---tdY~v~~~~~~s~~~~WN~t~~ 230 (934)
.||++- .+..|..+|.++++....+...
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEecC
Confidence 677776 5889999999999887766543
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.013 Score=64.16 Aligned_cols=74 Identities=23% Similarity=0.275 Sum_probs=52.6
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHHH--HHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNL--IASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~l--l~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
.+.|+.|....+|+... +++.++||+...........|...+ ++......+.+.+++....+..|+|||++++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45789999999998643 5678889987654433445554422 22223467888888888888999999999873
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.092 Score=56.09 Aligned_cols=76 Identities=16% Similarity=0.058 Sum_probs=48.8
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCC--CceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQH--PNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~H--pNIV~l~g~~~~~~~~yLVm 546 (934)
|......+.+|.|..+.||+....+|+.|.||+-..... .....|...+...-.. --+.+.+++. . -++||
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv~ 89 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLAM 89 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEEE
T ss_pred CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEEE
Confidence 444555778999999999998888999999998653321 2344555533222222 2345556543 2 37899
Q ss_pred ecccC
Q 002343 547 ERCTC 551 (934)
Q Consensus 547 E~c~~ 551 (934)
|++.+
T Consensus 90 e~l~~ 94 (288)
T 3f7w_A 90 EWVDE 94 (288)
T ss_dssp ECCCC
T ss_pred Eeecc
Confidence 98775
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.088 Score=57.26 Aligned_cols=159 Identities=13% Similarity=0.098 Sum_probs=96.2
Q ss_pred CCCeEEEEe--eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCC----------ceeEEeccccCc
Q 002343 47 EPDVALVAA--LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDED----------WELYFHSKRFGK 114 (934)
Q Consensus 47 ~~~~~lvst--ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d----------~~ly~~~~~~g~ 114 (934)
.+..++|+. .+++|+.+|..|+++.+++..+.-... ...+ ....+|+-+..+ ++||..+...++
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~---i~~~-~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTS---LVMD-KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCC---CEEC-TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccc---eEEc-CCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 356788887 589999999999999999986542211 1111 112355444433 788888876665
Q ss_pred ee-ecccCHHHHHhcCCeeecC-CceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCC-ccccCCCcccccc
Q 002343 115 MK-KLSSSAEEYIRRMPYISKD-GGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENK-HVVPVDGYEELVE 191 (934)
Q Consensus 115 ~~-klp~ti~e~v~~sP~~s~D-g~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 191 (934)
+. .++..... -...-++++| +.+|+... +++++|++||++... ... . . ....+ .+ -++
T Consensus 215 v~~~~~~~~g~-~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~---~~~-~-~---~~~~p~gi--------~vd 275 (328)
T 3dsm_A 215 VEKQFKFKLGD-WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR---PFL-E-F---RDTKYYGL--------TVN 275 (328)
T ss_dssp EEEEEECCTTC-CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS---CSB-C-C---CSSCEEEE--------EEC
T ss_pred EEEEEecCCCC-CceeEEEecCCCEEEEEcc--EEEEEECCCCceeee---eee-c-C---CCCceEEE--------EEc
Confidence 54 33321100 1134467765 47787665 889999999987421 100 0 0 00000 01 122
Q ss_pred ccCCccccccceEEEE-----eeeEEEEEecCCCCceEEEEEeeeecccc
Q 002343 192 SGVGNLKRIRQLVYIM-----RTDYVLQSTSQDSGEVLWNVAYADFKAEF 236 (934)
Q Consensus 192 ~~~~~~~~~~~~i~i~-----RtdY~v~~~~~~s~~~~WN~t~~~~~a~~ 236 (934)
|.. ..||+. +..=.|..||++ |++.|.+.+++.-..+
T Consensus 276 p~~-------g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~ 317 (328)
T 3dsm_A 276 PNN-------GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAF 317 (328)
T ss_dssp TTT-------CCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEE
T ss_pred CCC-------CeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceE
Confidence 211 267888 456689999998 9999999988765443
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.12 Score=55.22 Aligned_cols=109 Identities=14% Similarity=0.009 Sum_probs=71.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCC--ceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGR--PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~--~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
...++++++-||+|+.+|..+|++.+++..+. ..... +...+ ...+|+-...++.+|..+...|+.. .++..-.
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~s~d-g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTA--MMAPD-NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEE--EECTT-SSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCcee--EECCC-CCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 45566777889999999999999999998654 22111 11111 2246777778899999876655443 3332110
Q ss_pred ----HHHhcCCeeecCC-ceEeecee------------eEEEEEeCCCceEE
Q 002343 124 ----EYIRRMPYISKDG-GVTLGAMK------------TSVFLVDVKSGRVV 158 (934)
Q Consensus 124 ----e~v~~sP~~s~Dg-~~~~G~k~------------~t~f~vd~~tG~~~ 158 (934)
...-....+|+|| .+|++... .+++++|..||+..
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 0001345788999 67877755 89999999996644
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.064 Score=59.71 Aligned_cols=112 Identities=12% Similarity=0.005 Sum_probs=73.8
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccC-------CCCceeEEeccccCceeec
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDV-------DEDWELYFHSKRFGKMKKL 118 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~-------~~d~~ly~~~~~~g~~~kl 118 (934)
....++++. -||+|+.+|..+|+..+.+..+..+.... ...+ ...++.-. ..||.++..+...|++.+.
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~-g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLL--LSKD-GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEE--ECTT-SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEE--EcCC-CCEEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 456676666 79999999999999999998765543321 1111 11233222 1588898887666544332
Q ss_pred ccCHHHHHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 119 SSSAEEYIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 119 p~ti~e~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
- ..+. -....+.++|| +++++....++.+.|..+|+.++.+..
T Consensus 299 ~-~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 343 (433)
T 3bws_A 299 I-GPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV 343 (433)
T ss_dssp E-EEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred c-cCCC-CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC
Confidence 1 0010 11346778898 456678899999999999999998864
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.50 E-value=0.1 Score=53.82 Aligned_cols=114 Identities=15% Similarity=0.067 Sum_probs=72.0
Q ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhH
Q 002343 599 KANGHPSAQLLKVTRDIVSGLSHLHE-IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLV 677 (934)
Q Consensus 599 ~~~~l~~~~i~~i~~qIa~gL~yLHs-~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~ 677 (934)
...++++++++.++.|.+.+|.-+-. ..-..+=+-|..|++..+|+ |...+ +.+.
T Consensus 42 ~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~--V~f~~-~~s~--------------------- 97 (229)
T 2yle_A 42 YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA--VTLAP-AADD--------------------- 97 (229)
T ss_dssp HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC--EEECC-C------------------------
T ss_pred cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc--eeccc-cccc---------------------
Confidence 36789999999999999999876621 11123334578999988887 33332 1110
Q ss_pred HHHHHHhhhhhhccccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhh
Q 002343 678 YLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD 757 (934)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~ 757 (934)
.....+.|||... ...+.+.=|||||+++|..+--+-++
T Consensus 98 --------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e-------------- 136 (229)
T 2yle_A 98 --------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE-------------- 136 (229)
T ss_dssp -----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT--------------
T ss_pred --------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc--------------
Confidence 0122366888763 34567888999999999988743322
Q ss_pred cccccccCCCHHHHHHHHHcccC
Q 002343 758 RKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 758 ~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
....+.++++..||..|..-
T Consensus 137 ---~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 137 ---NEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ---TEEECCCHHHHHHHHHHTTC
T ss_pred ---ccchhhCHHHHHHHHHHHhc
Confidence 22346788999999999765
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.042 Score=61.25 Aligned_cols=151 Identities=11% Similarity=0.072 Sum_probs=96.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
...+++.++-||+|+.+|..+++..+++.. +..+..- + ...+...+|+-+..|+.++..+...|... .++..-.
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~- 255 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKIL--L-YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL- 255 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEE--E-EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE-
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEE--E-EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC-
Confidence 345666666889999999999999999973 3333221 1 11112246667778999999887665443 2322111
Q ss_pred HHhcCCeeecCC-ceEeece--------eeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 002343 125 YIRRMPYISKDG-GVTLGAM--------KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k--------~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (934)
-.+-+.++|| .+++|.. ..++++.|..+|+.+......+... .++ +.|
T Consensus 256 --~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~----------~~~--------~~~--- 312 (433)
T 3bws_A 256 --PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKR----------HIV--------SGN--- 312 (433)
T ss_dssp --EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEE----------EEE--------ECS---
T ss_pred --ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcc----------eEE--------ECC---
Confidence 2345677888 7777773 5699999999999988875322100 011 111
Q ss_pred ccccccceEEEE-eeeEEEEEecCCCCceEEEEE
Q 002343 196 NLKRIRQLVYIM-RTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 196 ~~~~~~~~i~i~-RtdY~v~~~~~~s~~~~WN~t 228 (934)
+. ..+|+. ..+-.|..+|.++++..+.+.
T Consensus 313 ~g----~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 313 TE----NKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp ST----TEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CC----CEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 11 134444 778889999999998887664
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.083 Score=57.14 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=74.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
...+++.++.||+|+..|..+|+...++..++.-..... +. +....++-...||.+++.+...|... .+.-. ..
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~-~s--pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-~~- 165 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLA-FS--PDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-GK- 165 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEE-EC--TTSSEEEEECTTSEEEEEETTTCSEEEEEECS-SS-
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEE-EC--CCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-Cc-
Confidence 356788889999999999999999999876542211111 11 12235566678888888766554332 11110 00
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.-.+-+.++|| .+.+|+...++.+.|.+||+.++++..
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 204 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 204 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc
Confidence 01234567788 578899999999999999999999864
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.15 Score=54.63 Aligned_cols=154 Identities=12% Similarity=0.058 Sum_probs=96.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCC-----ceeEEeccccCce------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDED-----WELYFHSKRFGKM------ 115 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d-----~~ly~~~~~~g~~------ 115 (934)
....+++++-||+|+..|..+|+..+++..+.++..-.. .. ....++-...| |.+++.+-..+..
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~--~~--~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEF--SP--CGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEE--CT--TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEE--cc--CCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 467888899999999999999999999997777655311 11 22344444445 7887765433211
Q ss_pred ------eecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCC-ceEEEEEecCCCCCCCCCCCCCCCccccCCCcc
Q 002343 116 ------KKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKS-GRVVDNYVLDFSASTPGFQSDENKHVVPVDGYE 187 (934)
Q Consensus 116 ------~klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~t-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (934)
.++.-.-..---.+-+.++|| .+++|....++.+.|..+ ++.+.++...... ...++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------v~~~~------ 225 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS---------ISDMQ------ 225 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC---------EEEEE------
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc---------eeEEE------
Confidence 011100000011233456676 788899999999999999 8888888753211 00011
Q ss_pred ccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 188 ELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 188 ~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
..| + ...|+.+-.|-.|..+|.+++.....+.
T Consensus 226 --~~~---~----~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 226 --FSP---D----LTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp --ECT---T----SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred --ECC---C----CCEEEEecCCceEEEEECCCCceeeeec
Confidence 111 1 1267777778889999998888777665
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.059 Score=58.03 Aligned_cols=29 Identities=21% Similarity=0.065 Sum_probs=23.4
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
.++|+|+.|.|||. .++. +.|+||..|..
T Consensus 174 ~l~HgDl~~~Nil~-~~~~--~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFLD-TGER--MWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEEE-CSSC--EEECCCTTCEE
T ss_pred eeeccCCCcCCEEE-CCCC--EEEEecccccC
Confidence 48999999999994 3443 68999998753
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.25 Score=52.32 Aligned_cols=175 Identities=13% Similarity=0.078 Sum_probs=106.6
Q ss_pred CCcchhhhhhccCCCCCCC-------CCCeEEEEe-eCC--eEEEEecCCCeeeeEecCCCceeeccccccCCCCccccc
Q 002343 28 PNRYVSEIYNSLLPPPLPP-------EPDVALVAA-LDG--TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYL 97 (934)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~-------~~~~~lvst-ldG--~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l 97 (934)
|..+.-++.+.+ |-...+ .++.|.+|| ++| +|+.+|..||++.=++.-++.....- .+..+..+|.
T Consensus 26 ~~~~~~~vv~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeG---it~~g~~ly~ 101 (262)
T 3nol_A 26 IPIYDYQIVHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEG---ISDWKDKIVG 101 (262)
T ss_dssp CCEEEEEEEEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEE---EEEETTEEEE
T ss_pred CcccceEEEEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeE---EEEeCCEEEE
Confidence 444444566666 542232 345777776 666 99999999999999887665443210 0111224666
Q ss_pred cCCCCceeEEeccccC-ceeecccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCC
Q 002343 98 DVDEDWELYFHSKRFG-KMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDE 176 (934)
Q Consensus 98 ~~~~d~~ly~~~~~~g-~~~klp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~ 176 (934)
=.-+++.++..+...+ .+..+|+.. .---+-...+.||+..-.+.+.++||+|++++.+.......
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g--------- 168 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG--------- 168 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT---------
T ss_pred EEeeCCEEEEEECccCcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC---------
Confidence 6677777887776443 444667643 12333343447888777889999999999999998753210
Q ss_pred CCccccCCCccccccccCCccccccceEEEEe--eeEEEEEecCCCCceEEEEEeeee
Q 002343 177 NKHVVPVDGYEELVESGVGNLKRIRQLVYIMR--TDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~R--tdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
=|....+|+-. .+. .||..- ++ .|..+||++|++.=.+.+...
T Consensus 169 ----~~~~~lNELe~---~~G-----~lyan~w~~~-~I~vIDp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 169 ----EELPELNELEW---VDG-----EIFANVWQTN-KIVRIDPETGKVTGIIDLNGI 213 (262)
T ss_dssp ----EECCCEEEEEE---ETT-----EEEEEETTSS-EEEEECTTTCBEEEEEECTTG
T ss_pred ----ccccccceeEE---ECC-----EEEEEEccCC-eEEEEECCCCcEEEEEECCcC
Confidence 01111122221 122 466653 44 788899999998766655443
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.24 Score=52.84 Aligned_cols=115 Identities=19% Similarity=0.162 Sum_probs=65.4
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCc----eeeccccccCCCCccccccCCC-----------CceeEEecc
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRP----IYSSYQASFNSNASEFYLDVDE-----------DWELYFHSK 110 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~----i~~~~~~~~~~~~~~~~l~~~~-----------d~~ly~~~~ 110 (934)
....++|+. -+|+|+.+|..+|++.+++..+.. -..+.......+...+|.-..+ ++.+++.+.
T Consensus 53 dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 53 DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 455565554 689999999999999999875321 1111110011111123433322 467777665
Q ss_pred ccCceeecc--cCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 111 RFGKMKKLS--SSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 111 ~~g~~~klp--~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
..|+..+.- +..+.- -.+-..|+||-+|++... ++++|++||+.+.++...
T Consensus 133 ~~~~~~~~~~~~~~~~~-~~~~~~s~dg~l~~~~~~--i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 133 ADGLEAKPVRTFPMPRQ-VYLMRAADDGSLYVAGPD--IYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp GGGGGBCCSEEEECCSS-CCCEEECTTSCEEEESSS--EEEECTTTCCEEEEECST
T ss_pred CCccccceeeeccCCCc-ccceeECCCCcEEEccCc--EEEEeCCCCceecccccc
Confidence 443221110 111110 012228899988887554 999999999999987654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.077 Score=57.41 Aligned_cols=74 Identities=12% Similarity=0.004 Sum_probs=38.1
Q ss_pred eeeecccCcEEEEEEEEecCcEEEEEEeecC-ChhHHHHHHH--HHHHhC--CCCceeEEE-E--EEecCCeEEEEEecc
Q 002343 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQ--NLIASD--QHPNIVRWY-G--VESDQDFVYLSLERC 549 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~-~~~~~~~Ei~--~ll~~l--~HpNIV~l~-g--~~~~~~~~yLVmE~c 549 (934)
.+.|+.|....+|+....+| .+++|+.... ..+....|.. ..++.. .-|.++... | +....+..+++|+++
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 45788888899998665555 6789988652 2223333433 222221 223333210 1 112245679999998
Q ss_pred cCC
Q 002343 550 TCS 552 (934)
Q Consensus 550 ~~s 552 (934)
+|.
T Consensus 106 ~G~ 108 (322)
T 2ppq_A 106 EGM 108 (322)
T ss_dssp CCB
T ss_pred CCc
Confidence 873
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.12 Score=56.12 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=40.2
Q ss_pred eecccCcEEEEEEEEecCcEEEEEEeecC-C-hhHHHHHHH--HHHHhCCCCceeEEEEE-----EecCCeEEEEEeccc
Q 002343 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKT-H-HDVALKEIQ--NLIASDQHPNIVRWYGV-----ESDQDFVYLSLERCT 550 (934)
Q Consensus 480 ~IG~GsfGtVy~~~~~~g~~VAVK~l~~~-~-~~~~~~Ei~--~ll~~l~HpNIV~l~g~-----~~~~~~~yLVmE~c~ 550 (934)
.|+ |....||+....+|+.+++|+.... . ......|.. ..++... -.+++++.. ....+..+++||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g-~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDE-VPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTT-CSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcC-CeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 7778899865556778999998633 2 223333433 1222211 123444432 223557789999998
Q ss_pred C
Q 002343 551 C 551 (934)
Q Consensus 551 ~ 551 (934)
|
T Consensus 111 G 111 (328)
T 1zyl_A 111 G 111 (328)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.15 Score=55.67 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=26.1
Q ss_pred CCCcccCCCCCeEEEecCC--CceEEEeecccccc
Q 002343 625 IGLIHRDLKPQNVLISKDK--SFCAKLSDMGISKR 657 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~ 657 (934)
..++|+|+.+.|||++.+. ...+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4699999999999997531 12478999998865
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.11 Score=57.02 Aligned_cols=152 Identities=11% Similarity=0.073 Sum_probs=97.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
....+++++-||+|+..| .+|+..+++.. ..++..-.. .+....++-...||.+++.+-..|... .+...-..
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~----~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKW----NKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEE----CTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEE----CCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 467889999999999999 88999999984 344443211 112245666778999998876555442 22222111
Q ss_pred HH-------------hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcccccc
Q 002343 125 YI-------------RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVE 191 (934)
Q Consensus 125 ~v-------------~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (934)
-. -.+-+.++|+.+++|.....+++.|..+|+.+.++...... ...+ ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~---------i~~~--------~~~ 256 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGP---------ISVL--------EFN 256 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSC---------EEEE--------EEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCc---------eEEE--------EEC
Confidence 00 35667788999999999999999999999998887532210 0001 011
Q ss_pred ccCCccccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 192 SGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 192 ~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
|. ...|+.+-.|-.|..+|..+++....+
T Consensus 257 ~~-------~~~l~~~~~d~~i~i~d~~~~~~~~~~ 285 (425)
T 1r5m_A 257 DT-------NKLLLSASDDGTLRIWHGGNGNSQNCF 285 (425)
T ss_dssp TT-------TTEEEEEETTSCEEEECSSSBSCSEEE
T ss_pred CC-------CCEEEEEcCCCEEEEEECCCCccceEe
Confidence 11 125667766777777777766554443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.31 E-value=0.24 Score=55.23 Aligned_cols=116 Identities=11% Similarity=0.019 Sum_probs=82.0
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecC---CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-eccc-
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT---GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSS- 120 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~---~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~- 120 (934)
+....+++++-||+|+..|..+++..+++.. ..++.+-. -.+....++-...||.+++.+-+.+... .+.+
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~----~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSIC----IDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEE----ECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEE----ECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 3477899999999999999999999999975 23443321 1112345667788898888776555442 2211
Q ss_pred -CHH-HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCC
Q 002343 121 -SAE-EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 121 -ti~-e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
.-+ .-+..+|..++|| .+.+|+...++.+-|..+|+.++++....
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 100 0123456777888 88899999999999999999999998543
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=94.29 E-value=0.35 Score=51.19 Aligned_cols=113 Identities=13% Similarity=0.176 Sum_probs=76.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
....+++++.||+|+..|..+++...++.. ..++.+-. -..+...++-...||.+++.+...+...+--..-..-
T Consensus 118 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 193 (312)
T 4ery_A 118 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH----FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 193 (312)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC
T ss_pred CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEE----EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC
Confidence 467888899999999999999999988874 33443321 1112346677788999988876555432211111000
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.-.+-+.++|| .+.+|+...++.+.|..+|+.++++..
T Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 00122456677 578899999999999999999998864
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=94.26 E-value=0.29 Score=52.00 Aligned_cols=155 Identities=14% Similarity=0.101 Sum_probs=96.8
Q ss_pred CCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHHHH
Q 002343 48 PDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~e~ 125 (934)
++.|.+|| ++|.|+.+|..||++.-++ -++.....- .+..+..+|.=.-+++.++..+...+ .+..+|+.-+
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeG---it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-- 137 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEG---LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-- 137 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEE---EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC--
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeE---EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc--
Confidence 45555555 6789999999999999998 555433211 11122356766777888888876444 4446776421
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
-.=+....+.||+..-.+.+.++||+|++++++....... =+....+|+-. .+. .||
T Consensus 138 --GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g-------------~~v~~lNeLe~---~dG-----~ly 194 (268)
T 3nok_A 138 --GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG-------------QPVELINELEC---ANG-----VIY 194 (268)
T ss_dssp --CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETT-------------EECCCEEEEEE---ETT-----EEE
T ss_pred --eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC-------------cccccccccEE---eCC-----EEE
Confidence 1122233447888888999999999999999998753310 01111122221 122 467
Q ss_pred EEe--eeEEEEEecCCCCceEEEEEeeee
Q 002343 206 IMR--TDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 206 i~R--tdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
..- ++ .|..+||++|++.=.+.++..
T Consensus 195 anvw~s~-~I~vIDp~TG~V~~~Idl~~L 222 (268)
T 3nok_A 195 ANIWHSS-DVLEIDPATGTVVGVIDASAL 222 (268)
T ss_dssp EEETTCS-EEEEECTTTCBEEEEEECHHH
T ss_pred EEECCCC-eEEEEeCCCCcEEEEEECCCC
Confidence 653 44 788899999998766655543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=94.24 E-value=0.37 Score=50.81 Aligned_cols=110 Identities=11% Similarity=-0.062 Sum_probs=76.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
.+..+++++.||+|+.+|..+++....+....++.... -.+....++-...||.+++.+...+...++.-.- --
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~----~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~--~~ 267 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG----YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE--SC 267 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS--SC
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEE----ECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc--cc
Confidence 46788899999999999999999999998766665431 1112234555567888888776555443332110 00
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
-.+...++|| .+++|+...++.+.|..+|+.+....
T Consensus 268 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~ 304 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK 304 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec
Confidence 1234567777 58889999999999999999986654
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.15 Score=55.98 Aligned_cols=115 Identities=19% Similarity=0.189 Sum_probs=74.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e 124 (934)
....++.++-||+|+..|..+|+..-+|.. ..++..- + ...+....|+-+..||.+.+.+...|+. ..+......
T Consensus 138 dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~--~-~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~ 214 (344)
T 4gqb_B 138 SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCV--A-ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG 214 (344)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE--E-ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEE--E-ecCCCCCceeeeccccccccccccccceeeeeecceee
Confidence 467888899999999999999999999973 3333321 0 1111224678889999999887655543 233322221
Q ss_pred HHhcCCeeecC-C-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 125 YIRRMPYISKD-G-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 125 ~v~~sP~~s~D-g-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
....+=+.+++ + ++.+|+...++.+.|.++|+.++++.-.
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h 256 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH 256 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC
T ss_pred ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC
Confidence 11122233443 3 5778999999999999999999998743
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.60 E-value=0.21 Score=53.91 Aligned_cols=150 Identities=14% Similarity=0.103 Sum_probs=94.7
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
|....+++++-||+|+.+|..+|+..+++.. +..+.+- . +.. ....++-...||.+++.+...|+.. .+.- .
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~-~-~sp--dg~~lasg~~dg~i~iwd~~~~~~~~~~~~--h 205 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI-A-YSP--DGKYLASGAIDGIINIFDIATGKLLHTLEG--H 205 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEE-E-ECT--TSSEEEEEETTSCEEEEETTTTEEEEEECC--C
T ss_pred CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEE-E-ECC--CCCEEEEEcCCCeEEEEECCCCcEEEEEcc--c
Confidence 3567888899999999999999999999875 3334332 1 111 2235556677888888776555432 2211 0
Q ss_pred HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 124 e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
+---.+-+.++|| .|.+|+...++.+-|.++|+.+.++...... +.. ....|. ..
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~------------v~~-----~~~sp~-------~~ 261 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW------------VLN-----VAFCPD-------DT 261 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC------------EEE-----EEECTT-------SS
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc------------eEE-----EEECCC-------CC
Confidence 0001234577787 6788999999999999999999887643210 100 001111 12
Q ss_pred eEEEEeeeEEEEEecCCCCceEE
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLW 225 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~W 225 (934)
.|..+-.|-+|..+|..+++..-
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCEEEE
Confidence 56677777778888877776543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.55 E-value=0.3 Score=54.14 Aligned_cols=153 Identities=12% Similarity=-0.008 Sum_probs=95.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
....+++++-||+|+.+|..+++...++.. ..++..-. . +...++-...||.+++.+-..+......+...+-
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~---~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 218 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLS---W---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS 218 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE---E---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEE---E---CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC
Confidence 467888899999999999999999999873 33333321 1 1246777888999998876422111111111100
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceE
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (934)
--.+-+.++|| .+++|+...++.+.|.++|+.+.++...... ...+ ..+|.. ..++
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~---------v~~~--------~~~p~~------~~ll 275 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA---------VKAV--------AWCPWQ------SNLL 275 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC---------CCEE--------EECTTS------TTEE
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce---------EEEE--------EECCCC------CCEE
Confidence 00223355566 7888999999999999999999987643211 0001 111111 1244
Q ss_pred EEEe--eeEEEEEecCCCCceEEEEE
Q 002343 205 YIMR--TDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 205 ~i~R--tdY~v~~~~~~s~~~~WN~t 228 (934)
..+- .|-.|..+|..+++....+.
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEE
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEe
Confidence 4433 68889999998988877664
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.49 E-value=0.25 Score=51.65 Aligned_cols=152 Identities=14% Similarity=0.154 Sum_probs=97.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
.+..+++++-||+|+..| +++..+.+.. ..++....- .......++-...||.+++.+... ..+.+... ..-
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~-~~~ 185 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKV---VSFSENKFLTASADKTIKLWQNDK-VIKTFSGI-HND 185 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEE---EETTTTEEEEEETTSCEEEEETTE-EEEEECSS-CSS
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEE---ccCCCCEEEEEECCCCEEEEecCc-eEEEEecc-Ccc
Confidence 366899999999999999 7788877763 333322111 111224567778899988876322 11121110 111
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
.-.+-+.++||-+++|+...++.+.|.++|+.++++...... ...++ ..| . ..|.
T Consensus 186 ~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------i~~~~--------~~~----~----~~l~ 240 (313)
T 3odt_A 186 VVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESF---------VYCIK--------LLP----N----GDIV 240 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC---------EEEEE--------ECT----T----SCEE
T ss_pred cEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCce---------EEEEE--------Eec----C----CCEE
Confidence 113456778999999999999999999999999998743211 00011 111 0 1366
Q ss_pred EEeeeEEEEEecCCCCceEEEEEee
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
.+-.|-.|..+|.++++..+.+...
T Consensus 241 ~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 241 SCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEETTSEEEEECTTTCCEEEEEECS
T ss_pred EEecCCEEEEEECCCCceeEEEecc
Confidence 7778888999999999887776544
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=93.47 E-value=0.11 Score=56.69 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=75.6
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecC-------CCceeeccccccCCCCccccccCCCC---ceeEEeccccCcee-ec
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGT-------GRPIYSSYQASFNSNASEFYLDVDED---WELYFHSKRFGKMK-KL 118 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~-------~~~i~~~~~~~~~~~~~~~~l~~~~d---~~ly~~~~~~g~~~-kl 118 (934)
.+++++.||+|+.+|..+++..+++.. ..++.+-.. .+....++-...| |.+++.+-..+... .+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~----~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF----SPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE----CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE----CCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 888899999999999999999999987 666654311 1122455566677 88888876555432 22
Q ss_pred ccC-H----------HHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 119 SSS-A----------EEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 119 p~t-i----------~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
.-. . .+---.+-+.++|| .|++|+...++.+.|.++|+.+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 210 0 00000223456666 78889999999999999999999998
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=93.36 E-value=0.38 Score=53.12 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=90.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCC-------eeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-e
Q 002343 47 EPDVALVAALDGTIHLVDTKLG-------KIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K 117 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg-------~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-k 117 (934)
.+.++++++-||+|+..|..++ +...++.. ..++..-. ...+ ....++-...||.+++.+-..|... .
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA--WHPT-AQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE--ECSS-BTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE--ECcC-CCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 4678888899999999999988 44444442 22222210 0111 1135667788999988876555432 3
Q ss_pred cccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCc
Q 002343 118 LSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGN 196 (934)
Q Consensus 118 lp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (934)
+......-.-.+-+.++|| .+++|++..++.+.|.++|+.+.++....... .. .+ ....|
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------~~--~~------~~~~~---- 230 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-------RP--VH------AVFVS---- 230 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-------SC--CE------EEECS----
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-------cc--eE------EEEcC----
Confidence 3101110001233456677 78899999999999999999999984221100 00 00 00111
Q ss_pred cccccceEEEE---eeeEEEEEecCCCCce
Q 002343 197 LKRIRQLVYIM---RTDYVLQSTSQDSGEV 223 (934)
Q Consensus 197 ~~~~~~~i~i~---RtdY~v~~~~~~s~~~ 223 (934)
. ...|..+ ..|-.|..+|.+++..
T Consensus 231 ~---~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 231 E---GKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp T---TEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred C---CcEEEEeccCCCCceEEEEcCccccC
Confidence 1 1267777 6788999999877664
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=93.34 E-value=0.4 Score=50.68 Aligned_cols=152 Identities=15% Similarity=0.154 Sum_probs=96.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e 124 (934)
....+++++-||+|+..|..+++..-++.. ...+.... -.+....++-...||.+++.+-..+.. +.++..-.
T Consensus 76 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~- 150 (312)
T 4ery_A 76 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN----FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD- 150 (312)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE----ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEE----EcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-
Confidence 467888899999999999999999888863 23333211 111224566778899998887655543 23322100
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccce
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (934)
--.+-+.++|| .+++|+...++.+.|..+|+.++++....... +.. ....|. ...
T Consensus 151 -~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----------~~~-----~~~~~~-------~~~ 206 (312)
T 4ery_A 151 -PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-----------VSF-----VKFSPN-------GKY 206 (312)
T ss_dssp -CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC-----------EEE-----EEECTT-------SSE
T ss_pred -cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc-----------eEE-----EEECCC-------CCE
Confidence 00122456677 67889999999999999999998875332111 100 001111 126
Q ss_pred EEEEeeeEEEEEecCCCCceEEEE
Q 002343 204 VYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 204 i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
|..+-.|-.|..+|..+++.....
T Consensus 207 l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 207 ILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEE
Confidence 777777888888888888765543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=93.28 E-value=0.2 Score=55.01 Aligned_cols=154 Identities=13% Similarity=0.129 Sum_probs=95.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e 124 (934)
....+++++-||+|+..|..+|+...+|.. ..++.+- . ...+....++-...||.+++.+...+.. ..+.+...+
T Consensus 150 dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v-~--~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 226 (357)
T 4g56_B 150 DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCV-A--ACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASD 226 (357)
T ss_dssp SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE-E--ECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE-E--EccCCCceeeeeccCCceEEEECCCCceeeeeeecccc
Confidence 467888889999999999999999999974 3333321 1 1111224677888999999876655433 223322221
Q ss_pred HHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 125 YIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 125 ~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
-.-.+=..++|+ .+.+|+...++.+.|.++|+.++++..... . ...++ ..|. . ..
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~-~--------v~~l~--------~sp~---~---~~ 283 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ-N--------ITGLA--------YSYH---S---SP 283 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS-C--------EEEEE--------ECSS---S---SC
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce-e--------EEEEE--------EcCC---C---CC
Confidence 111122344453 678899999999999999999998864321 0 00011 1111 0 01
Q ss_pred eEEEEeeeEEEEEecCCCCceEEE
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWN 226 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN 226 (934)
.|.-+=.|-+|..+|.++|+....
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCcEeEE
Confidence 455565667788888888876643
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=93.21 E-value=0.24 Score=56.37 Aligned_cols=70 Identities=14% Similarity=0.030 Sum_probs=42.8
Q ss_pred eeeecccCcEEEEEEEEec--------CcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 478 NKEIAKGSNGTVVLEGNYE--------GRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~--------g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.+.|+.|-...||+....+ ++.|.+|+...... +...+|...+...-.+.-..++++.+.+ .+|+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 4568888889999875542 57899998744222 4445565532221122223567776543 289999
Q ss_pred ccC
Q 002343 549 CTC 551 (934)
Q Consensus 549 c~~ 551 (934)
++|
T Consensus 154 l~G 156 (429)
T 1nw1_A 154 IPS 156 (429)
T ss_dssp CCE
T ss_pred eCC
Confidence 886
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=92.98 E-value=0.4 Score=50.81 Aligned_cols=109 Identities=13% Similarity=0.089 Sum_probs=74.2
Q ss_pred CCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccc-cCceeecccCHHHH
Q 002343 48 PDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKR-FGKMKKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~-~g~~~klp~ti~e~ 125 (934)
++.+.++| .+++++.+|..|+++.=+|.-++ .. .. .+.+...+|+-++ +..|++.+.. ...+.+++.+-.
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~--eG--~g-lt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~-- 167 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG--EG--WG-LTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAH-- 167 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC--CC-EEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEET--
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCC--Cc--eE-EecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccC--
Confidence 55667666 48899999999999999998543 10 01 1112335677776 6778888874 334445555321
Q ss_pred HhcCC------eeecCCceEeec-eeeEEEEEeCCCceEEEEEecCCC
Q 002343 126 IRRMP------YISKDGGVTLGA-MKTSVFLVDVKSGRVVDNYVLDFS 166 (934)
Q Consensus 126 v~~sP------~~s~Dg~~~~G~-k~~t~f~vd~~tG~~~~~~~~~~~ 166 (934)
--| .--.||-||+.. ..+++.+|||+||+++.+....+.
T Consensus 168 --g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 168 --GEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGI 213 (262)
T ss_dssp --TEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTG
T ss_pred --CccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcC
Confidence 111 111289999998 799999999999999999987643
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=92.97 E-value=0.33 Score=51.20 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=89.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCe--eeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGK--IRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSA 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~--~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti 122 (934)
....+++++-||+|+..|..+++ ....+.. ..++..-. -.++...++-...||.+++.+-..+... .+.-
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-- 181 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA----ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-- 181 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEE----ECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec--
Confidence 46788889999999999999988 5555543 33343321 0112235556677888888776554332 2211
Q ss_pred HHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccccc
Q 002343 123 EEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (934)
.+---.+-+.++|| .+++|+...++.+.|.++|+.+..+..... +.. -.+.|. .
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-------------v~~-----~~~s~~-------~ 236 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ-------------IFS-----LGYCPT-------G 236 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC-------------EEE-----EEECTT-------S
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCc-------------eEE-----EEECCC-------C
Confidence 00001233556677 788899999999999999999999864321 100 001111 1
Q ss_pred ceEEEEeeeEEEEEecCCCCce
Q 002343 202 QLVYIMRTDYVLQSTSQDSGEV 223 (934)
Q Consensus 202 ~~i~i~RtdY~v~~~~~~s~~~ 223 (934)
..|+++-.+-.|..+|..+++.
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCE
T ss_pred CEEEEEcCCCcEEEEECCCCCe
Confidence 2677777777788888877664
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=92.92 E-value=0.072 Score=58.95 Aligned_cols=153 Identities=10% Similarity=0.006 Sum_probs=97.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
....+++++.||+|+..|..+++....+.......... ... ....++-...||.+++.+...+...+.--.-.. -
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~--~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-~ 141 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDT--AKL--QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVS-E 141 (420)
T ss_dssp EETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEE--ECS--SSCEEEEEETTSCEEEECTTSCEEEEETTSSSS-C
T ss_pred cCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEE--Eec--CCCEEEEEECCCCEEEEeCCCcceeeecccccC-c
Confidence 46678889999999999999999888877664443321 111 223455566788888876655544332111000 0
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
-.+-+.++|| .+++|+...++.+-|..+|+.++++...... +.. ....| . ...|+
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~------------v~~-----~~~~~----~---~~~l~ 197 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT------------VTD-----IAIID----R---GRNVL 197 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC------------EEE-----EEEET----T---TTEEE
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc------------EEE-----EEEcC----C---CCEEE
Confidence 1234567777 6889999999999999999999988643210 100 00111 1 12567
Q ss_pred EEeeeEEEEEecCCCCceEEEEE
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
.+-.|-+|..+|.++++..+.+.
T Consensus 198 s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC
T ss_pred EEcCCCcEEEeECCCCceeEEee
Confidence 77777788888888877666543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.42 Score=52.67 Aligned_cols=157 Identities=16% Similarity=0.140 Sum_probs=92.7
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCC-------CceeeccccccCCCCccccccCCCCceeEEeccccC-c-eeec
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTG-------RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-K-MKKL 118 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~-------~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~-~~kl 118 (934)
+..++.++-||+|++.|..+|+....|... ++.... .+..+...|+-...||.+.+.+-+.+ . ++.+
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~----~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS----INSLNANMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE----ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE----eecCCCCEEEEEECCCeEEEEECCCCCcceEEE
Confidence 456888999999999999999998887422 111111 11112346677777888777654311 1 1111
Q ss_pred ccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcc
Q 002343 119 SSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNL 197 (934)
Q Consensus 119 p~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (934)
. -.+---.+=+.++|| .+.+|+...++.+-|.++|+.++++....... ..+.+ .+. +-.+...
T Consensus 246 ~--~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-----~~~~~-~v~--------~~~~s~~ 309 (380)
T 3iz6_a 246 H--GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN-----DNELP-IVT--------SVAFSIS 309 (380)
T ss_dssp C--CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS-----CCSSC-SCS--------EEEECSS
T ss_pred C--CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc-----ccccC-ceE--------EEEECCC
Confidence 0 000000122456677 68899999999999999999999987532110 00100 000 0011111
Q ss_pred ccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 198 KRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 198 ~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
...|+.|-.|-.|..+|..+++...++
T Consensus 310 ---g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 310 ---GRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp ---SSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ---CCEEEEEECCCCEEEEECCCCceEEEE
Confidence 127888888888888888888776554
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=92.83 E-value=0.72 Score=51.75 Aligned_cols=109 Identities=12% Similarity=0.185 Sum_probs=65.2
Q ss_pred CCCCeEEEEeeCC---eEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCC--CceeEEeccccCceeeccc
Q 002343 46 PEPDVALVAALDG---TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDE--DWELYFHSKRFGKMKKLSS 120 (934)
Q Consensus 46 ~~~~~~lvstldG---~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~--d~~ly~~~~~~g~~~klp~ 120 (934)
|....+++++.|+ +|+.+|..+|+...-......+... ++..+.+ .++.-... +..||..+...|..++|.-
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~--~~spdg~-~la~~~~~~g~~~i~~~d~~~~~~~~l~~ 264 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAP--AFSPDGS-KLAFALSKTGSLNLYVMDLASGQIRQVTD 264 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEE--EECTTSS-EEEEEECTTSSCEEEEEETTTCCEEECCC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCE--EEcCCCC-EEEEEEecCCCceEEEEECCCCCEEeCcC
Confidence 3566677677775 9999999999887433333333332 1122211 23222333 3458888776666655532
Q ss_pred CHHHHHhcCCeeecCCc-eEeeceee---EEEEEeCCCceEEE
Q 002343 121 SAEEYIRRMPYISKDGG-VTLGAMKT---SVFLVDVKSGRVVD 159 (934)
Q Consensus 121 ti~e~v~~sP~~s~Dg~-~~~G~k~~---t~f~vd~~tG~~~~ 159 (934)
.- -...+|..|+||- ++.++..+ .++++|..+|+..+
T Consensus 265 ~~--~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~ 305 (415)
T 2hqs_A 265 GR--SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR 305 (415)
T ss_dssp CS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE
T ss_pred CC--CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE
Confidence 21 1235789999994 55555433 89999999998543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=92.68 E-value=0.49 Score=52.07 Aligned_cols=168 Identities=14% Similarity=0.098 Sum_probs=99.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec-CCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG-TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
.+..+++++-||+|+..|..+++....+. -..++..-.. .. ....++-...||.+++.+-..|... .+.- ..
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--h~ 181 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF--FP--SGEALISSSQDMQLKIWSVKDGSNPRTLIG--HR 181 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE--CT--TSSEEEEEETTSEEEEEETTTCCCCEEEEC--CS
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE--CC--CCCEEEEEeCCCeEEEEeCCCCcCceEEcC--CC
Confidence 56788889999999999999999999874 3344433211 11 2246667788999888776544332 2210 00
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCC-------ccccccccCCc
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDG-------YEELVESGVGN 196 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 196 (934)
---.+-+.++|| .+++|+...++.+-|.++|+.++++....... .++..- ...+... .....+..+..
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~v~~~---~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPH-DGVNSI---ALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTT-CCEEEE---EEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCC-CCccEE---EEecCCcceeeecccCcccceEEcC
Confidence 001234567777 58889999999999999999999987532110 000000 0000000 00000111111
Q ss_pred cccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 197 LKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 197 ~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
. ...|+.+-.|=.|..+|..++.....+
T Consensus 258 ~---~~~l~~~~~dg~i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 258 Y---GKYVIAGHVSGVITVHNVFSKEQTIQL 285 (420)
T ss_dssp T---TEEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred C---CCEEEEEcCCCeEEEEECCCCceeEEc
Confidence 1 137788888888888888888766655
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=92.64 E-value=0.27 Score=54.43 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=23.2
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccc
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISK 656 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk 656 (934)
.++|+|++|.|||++.++ +.|+||..|.
T Consensus 213 ~l~HgDl~~~Nil~~~~~---~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC---LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C---EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc---EEEEEecCCC
Confidence 589999999999996432 7899999875
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.56 E-value=0.14 Score=56.19 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=77.7
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e~ 125 (934)
+..+++++-||+|+.+|..+++....+.. ..++..-. . .. ....++-...||.+++.+...+.. ..+.- ..-
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~-~-~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~ 290 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLE-F-ND--TNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQ 290 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEE-E-ET--TTTEEEEEETTSCEEEECSSSBSCSEEECC--CSS
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEE-E-CC--CCCEEEEEcCCCEEEEEECCCCccceEecC--CCc
Confidence 56789999999999999999999999863 33443321 0 11 223566677889998887654432 22211 100
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
--.+-+.++||.+++|+...++.+.|.++|+.+.++...
T Consensus 291 ~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 329 (425)
T 1r5m_A 291 SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVD 329 (425)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECT
T ss_pred cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccC
Confidence 113456788999999999999999999999999998753
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=92.50 E-value=0.3 Score=53.33 Aligned_cols=165 Identities=9% Similarity=-0.029 Sum_probs=93.0
Q ss_pred CCCCe-EEEEeeCCeEEEEecCC------Ceeee-----EecC--------CCceeeccccccCCCCccccccCCCCcee
Q 002343 46 PEPDV-ALVAALDGTIHLVDTKL------GKIRW-----SFGT--------GRPIYSSYQASFNSNASEFYLDVDEDWEL 105 (934)
Q Consensus 46 ~~~~~-~lvstldG~~~~v~~~s------g~~~W-----~~~~--------~~~i~~~~~~~~~~~~~~~~l~~~~d~~l 105 (934)
+.... +++++-||+|+.+|..+ ++... ++.. ...+.+-. -.++. .++-...||.+
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVD----ISERG-LIATGFNNGTV 209 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEE----ECTTS-EEEEECTTSEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEE----ECCCc-eEEEEeCCCcE
Confidence 45677 88889999999999988 76665 5531 22232210 11122 66777889999
Q ss_pred EEeccccCcee-ecccCH-H---HHHhcCCeeecCC-ceEeecee---eEEEEEeCCCceEEEEEecCCCCCCCCCC--C
Q 002343 106 YFHSKRFGKMK-KLSSSA-E---EYIRRMPYISKDG-GVTLGAMK---TSVFLVDVKSGRVVDNYVLDFSASTPGFQ--S 174 (934)
Q Consensus 106 y~~~~~~g~~~-klp~ti-~---e~v~~sP~~s~Dg-~~~~G~k~---~t~f~vd~~tG~~~~~~~~~~~~~~~~~~--~ 174 (934)
++.+...+... .+.-.. . +---.+-+.++|| .+++|+.. .++.+.|.++|+.+.++..........+. .
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 88876554332 222100 0 0001233566676 57788888 89999999999999998642110000000 0
Q ss_pred CCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 175 DENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
.+.. + .+-.+... ...|+.+-.|-+|..+|.++++....+.
T Consensus 290 ~~~~-v---------~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 290 HSSW-V---------MSLSFNDS---GETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSSC-E---------EEEEECSS---SSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCCc-E---------EEEEECCC---CCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 0000 0 00011111 1267788888889999988888766655
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.49 E-value=0.84 Score=49.48 Aligned_cols=162 Identities=11% Similarity=0.040 Sum_probs=96.5
Q ss_pred CCCCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCc--eeeccc-
Q 002343 45 PPEPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGK--MKKLSS- 120 (934)
Q Consensus 45 ~~~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~--~~klp~- 120 (934)
.+...++++++.||+|+.+|..+++...++.. ..++..-. ...+....++-...||.+++.+-+.+. +..+..
T Consensus 153 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~---~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~ 229 (408)
T 4a11_B 153 STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS---WSPRYDYILATASADSRVKLWDVRRASGCLITLDQH 229 (408)
T ss_dssp CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE---ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT
T ss_pred CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE---ECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc
Confidence 34566899999999999999999999999984 33443321 111111246678889999887653332 211100
Q ss_pred ------------CHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcc
Q 002343 121 ------------SAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYE 187 (934)
Q Consensus 121 ------------ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (934)
...+---.+-+.++|| .+++|+...++.+.|..+|+.+..+....... ....
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---------------~~~~ 294 (408)
T 4a11_B 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNN---------------SKKG 294 (408)
T ss_dssp TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCC---------------CSSC
T ss_pred ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccccc---------------cccc
Confidence 0000001233567787 68889999999999999998766543221100 0000
Q ss_pred ccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 188 ELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 188 ~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
......... ...+..+..+-.|..+|..+++....+.
T Consensus 295 ~~~~~~~~~----~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 295 LKFTVSCGC----SSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp CCCEECCSS----SSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred ceeEEecCC----CceEEEEecCCEEEEEECcCCcceeeec
Confidence 001111111 1256677788889999988888776543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=92.43 E-value=0.42 Score=50.07 Aligned_cols=109 Identities=16% Similarity=0.095 Sum_probs=73.6
Q ss_pred CCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHHHH
Q 002343 48 PDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~e~ 125 (934)
++.+.++| -+|+++.+|..|+++.=+|.-+.- . .. ...+...+|+-++ +..|++.+.... .+.+++.+-.
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---G-wg-lt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~-- 145 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE---G-WA-LTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAG-- 145 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC---C-CE-EEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEET--
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---c-eE-EeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccC--
Confidence 34555544 588899999999999999985321 0 01 1112335778776 778888887433 3445555431
Q ss_pred HhcCCeee------cCCceEeec-eeeEEEEEeCCCceEEEEEecCCC
Q 002343 126 IRRMPYIS------KDGGVTLGA-MKTSVFLVDVKSGRVVDNYVLDFS 166 (934)
Q Consensus 126 v~~sP~~s------~Dg~~~~G~-k~~t~f~vd~~tG~~~~~~~~~~~ 166 (934)
--|... .||-+|+.. .++.+.+|||+||+++.++...+.
T Consensus 146 --g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l 191 (243)
T 3mbr_X 146 --GRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQAL 191 (243)
T ss_dssp --TEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGG
T ss_pred --CcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcC
Confidence 122211 389999988 799999999999999999997654
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=92.07 E-value=0.99 Score=49.41 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=25.5
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeecccccc
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~ 657 (934)
..++|+|+.|.|||++.++. +.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~--~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEES--IYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGC--EEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCe--EEEEECCCCee
Confidence 36999999999999975443 78999987764
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=91.93 E-value=0.67 Score=52.00 Aligned_cols=154 Identities=12% Similarity=0.096 Sum_probs=93.6
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecc-------
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLS------- 119 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp------- 119 (934)
++.+++++.||+|+..|..+|+...++.. ..++..-.- ....+...++-...||.+++.+-..+......
T Consensus 173 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 173 GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI--VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--EESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred CCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE--ecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 44899999999999999999999999973 344433210 11122345667778888888765433211000
Q ss_pred ---cC----------HHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCC
Q 002343 120 ---SS----------AEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDG 185 (934)
Q Consensus 120 ---~t----------i~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (934)
++ ...-....-+++.|| .+++|+...++.+.|..+|+.+.++..... . ...++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~--------v~~~~---- 317 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD-R--------IYSTI---- 317 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-C--------EEEEE----
T ss_pred eEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-C--------EEEEE----
Confidence 00 000000111233444 788999999999999999999999853221 0 00011
Q ss_pred ccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 186 YEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
..| ....|+.+-.|-+|..+|..+|+....+
T Consensus 318 ----~~~-------~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 318 ----YDH-------ERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp ----EET-------TTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ----EcC-------CCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 111 0126778888888888898888776654
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=91.87 E-value=0.41 Score=53.60 Aligned_cols=154 Identities=10% Similarity=0.073 Sum_probs=85.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceee-ccc----cccCCC-----------------------------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYS-SYQ----ASFNSN----------------------------- 91 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~-~~~----~~~~~~----------------------------- 91 (934)
.+..+++++-||+|+..|..+|+..+++.. ..++.. ... +....+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 221 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF 221 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 667777777777777777777777777652 222211 100 000000
Q ss_pred CccccccCCCCceeEEeccccCceeecccCHHHHHhcCCe--ee-cCCceEeeceeeEEEEEeCCCceEEEEEecCCCCC
Q 002343 92 ASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPY--IS-KDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSAS 168 (934)
Q Consensus 92 ~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~~sP~--~s-~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~ 168 (934)
.+..++-...||.+++.+-..+....+..+.. -+..++ ++ ....+++|+...++.+.|.++|+.++++..... .
T Consensus 222 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~ 298 (435)
T 1p22_A 222 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLV--GHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR-G 298 (435)
T ss_dssp CTTEEEEEETTSCEEEEECSSSSCCEEEEEEC--CCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS-C
T ss_pred cCCEEEEeeCCCcEEEEeCCCCCCceeeeEec--CCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC-c
Confidence 01234455566776665543332211000000 001111 11 345788999999999999999999999874321 1
Q ss_pred CCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 169 TPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
. .| +. . + ...|..+-.|-+|..+|..+|+....+.
T Consensus 299 --------v--~~--------~~--~-~----~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 299 --------I--AC--------LQ--Y-R----DRLVVSGSSDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp --------E--EE--------EE--E-E----TTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred --------E--EE--------EE--e-C----CCEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence 0 11 10 1 1 1267788888888899988887765543
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=91.73 E-value=0.72 Score=51.75 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=74.7
Q ss_pred cCCCCCCCCCCeEEEEee-----CCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccC---------CCCce
Q 002343 39 LLPPPLPPEPDVALVAAL-----DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDV---------DEDWE 104 (934)
Q Consensus 39 ~~~~~~~~~~~~~lvstl-----dG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~---------~~d~~ 104 (934)
.+|+ |....++|+.. +|+++.+|..|+++.+++..|.--.. + .+-+...+|+-+ .+++.
T Consensus 38 ~~~~---pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~v---a-~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPA---PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNP---V-VADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCC---CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEE---E-ECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eccC---CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcE---E-ECCCCCEEEEEcccccccccCCCCCE
Confidence 5664 55778888887 79999999999999999986533211 1 111122345433 13455
Q ss_pred eEEeccccCcee-ecccCH--HHHHhcCC---eeecCC-ceEeece--eeEEEEEeCCCceEEEEEecCC
Q 002343 105 LYFHSKRFGKMK-KLSSSA--EEYIRRMP---YISKDG-GVTLGAM--KTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 105 ly~~~~~~g~~~-klp~ti--~e~v~~sP---~~s~Dg-~~~~G~k--~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
+.+.+...+++. .++.-- .-.+...| .+|+|| -+|+..- .+++-+||..|++++.+....+
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 666665444332 333210 00000122 577899 5788764 6899999999999999997643
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=91.71 E-value=1.2 Score=48.09 Aligned_cols=149 Identities=12% Similarity=0.084 Sum_probs=87.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCC-CceeeccccccCCCCccccccCCCCceeEEecccc--CceeecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF--GKMKKLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~--g~~~klp~ti~ 123 (934)
...+++.++.||+|+..|..+++...++... ..+..- ++.. ....++-.+.|+.+.+.+-.. +.. ++..++.
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~--~~s~--~~~~l~s~~~d~~v~iw~~~~~~~~~-~~~~~~~ 140 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC--AYAP--SGNYVACGGLDNICSIYNLKTREGNV-RVSRELA 140 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEE--EECT--TSSEEEEEETTCEEEEEETTTCSBSC-EEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEE--EECC--CCCEEEEEeCCCeEEEEECccCCCcc-eeEEEec
Confidence 5678889999999999999999988877632 223221 0011 123444556677666654322 111 1110000
Q ss_pred ---HHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccc
Q 002343 124 ---EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (934)
Q Consensus 124 ---e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (934)
..| .+=..++||.+++|+...++.+-|.+||+.+.++..... . ...++ +.|.
T Consensus 141 ~h~~~v-~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~--------v~~~~--------~~~~------- 195 (340)
T 1got_B 141 GHTGYL-SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG-D--------VMSLS--------LAPD------- 195 (340)
T ss_dssp CCSSCE-EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-C--------EEEEE--------ECTT-------
T ss_pred CCCccE-EEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCC-c--------eEEEE--------ECCC-------
Confidence 000 111246788999999999999999999999998853221 0 00010 1110
Q ss_pred cceEEEEeeeEEEEEecCCCCceEE
Q 002343 201 RQLVYIMRTDYVLQSTSQDSGEVLW 225 (934)
Q Consensus 201 ~~~i~i~RtdY~v~~~~~~s~~~~W 225 (934)
...|..+-.|-+|..+|..++...-
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEE
Confidence 1266777777888888887776543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=91.68 E-value=2 Score=45.39 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=85.1
Q ss_pred CCCeEEEEeeCC---eEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCce-eEEecc-ccCcee-----
Q 002343 47 EPDVALVAALDG---TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWE-LYFHSK-RFGKMK----- 116 (934)
Q Consensus 47 ~~~~~lvstldG---~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~-ly~~~~-~~g~~~----- 116 (934)
....++++.-+| +|+.+|..+|++..++..+...... + ...+...+|.-+..++. ++...- ..|.+.
T Consensus 94 dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~--~-~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGI--A-ISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEE--E-ECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccce--E-ECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 456666555553 8999999999999888765543321 0 11111235555555555 443322 122221
Q ss_pred ecccCHHHHHhcCCeeecCCc-e-EeeceeeEEEEEeCCCceE---EEEEecCCCCCCCCCCCCCCCccccCCCcccccc
Q 002343 117 KLSSSAEEYIRRMPYISKDGG-V-TLGAMKTSVFLVDVKSGRV---VDNYVLDFSASTPGFQSDENKHVVPVDGYEELVE 191 (934)
Q Consensus 117 klp~ti~e~v~~sP~~s~Dg~-~-~~G~k~~t~f~vd~~tG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (934)
.++-.- -.....+|+||- + +++....++.++|.+||+. +.++....... .+ .+.
T Consensus 171 ~~~~~~---~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~----------~~--------~~s 229 (331)
T 3u4y_A 171 FISGGT---RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPG----------TI--------VVS 229 (331)
T ss_dssp EECSSS---SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCC----------CE--------EEC
T ss_pred cccCCC---CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCc----------eE--------EEC
Confidence 111100 014457889993 4 4556778999999999998 77766332110 01 111
Q ss_pred ccCCccccccceEEEE-eeeEEEEEecCCCCceEEEE
Q 002343 192 SGVGNLKRIRQLVYIM-RTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 192 ~~~~~~~~~~~~i~i~-RtdY~v~~~~~~s~~~~WN~ 227 (934)
| +. ..||+. +.+-.|..+|.++|++..--
T Consensus 230 p---dg----~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 230 R---DG----STVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp T---TS----SEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred C---CC----CEEEEEEcCCCEEEEEECCCCceeeec
Confidence 1 11 145655 55777999999999886533
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.68 E-value=0.76 Score=50.28 Aligned_cols=113 Identities=11% Similarity=-0.012 Sum_probs=73.5
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-------CCceeeccccccCCCCccccccCCCCc---eeEEeccccCc--e
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-------GRPIYSSYQASFNSNASEFYLDVDEDW---ELYFHSKRFGK--M 115 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-------~~~i~~~~~~~~~~~~~~~~l~~~~d~---~ly~~~~~~g~--~ 115 (934)
+.++++++-||+|+.+|..+++...++.. ..++..-. ...+ ....++-...|| .+++.+-..+. +
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~~~~l~~~~~d~~~~~i~~~d~~~~~~~~ 254 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE--WHPK-NSTRVATATGSDNDPSILIWDLRNANTPL 254 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE--ECSS-CTTEEEEEECCSSSCCCCEEETTSTTSCS
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE--ECCC-CCCEEEEEECCCCCceEEEEeCCCCCCCc
Confidence 56788889999999999999999999986 33443321 1111 123555666676 88877654432 1
Q ss_pred eecccCHHHHHhcCCeeec-CC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 116 KKLSSSAEEYIRRMPYISK-DG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 116 ~klp~ti~e~v~~sP~~s~-Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
+.+.. ..+---.+-+.++ || .+++|+...++.+.|.++|+.+.++...
T Consensus 255 ~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 255 QTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp BCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred EEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 11110 0100012344565 55 7889999999999999999999998753
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=91.63 E-value=0.29 Score=54.86 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=25.4
Q ss_pred CCcccCCCCCeEEEecCC--CceEEEeecccccc
Q 002343 626 GLIHRDLKPQNVLISKDK--SFCAKLSDMGISKR 657 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~--~~~vKLsDFGlAk~ 657 (934)
.++|+|+.+.|||++.+. ...+.|+||..|..
T Consensus 221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 599999999999998651 12489999998863
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=91.63 E-value=0.48 Score=50.30 Aligned_cols=108 Identities=10% Similarity=0.001 Sum_probs=70.7
Q ss_pred CCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHHHH
Q 002343 48 PDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~e~ 125 (934)
++.+.++| .++.++.+|..|+++.=+|.-++-=.. ...+...+|+-++ +..|++.+.... .+.+++.+-.
T Consensus 105 g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwG-----Lt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~-- 176 (268)
T 3nok_A 105 GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWG-----LCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLR-- 176 (268)
T ss_dssp SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCC-----EEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEET--
T ss_pred CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeE-----EecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCC--
Confidence 45555555 688999999999999999985321000 1111224666665 777888776433 3334544321
Q ss_pred HhcCCee------ecCCceEeec-eeeEEEEEeCCCceEEEEEecCC
Q 002343 126 IRRMPYI------SKDGGVTLGA-MKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 126 v~~sP~~------s~Dg~~~~G~-k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
--|.. -.||-+|+.. ..+++.+|||+||+++.++...+
T Consensus 177 --g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 177 --GQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp --TEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred --CcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 11210 1299999998 78999999999999999998753
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=91.53 E-value=0.53 Score=52.72 Aligned_cols=146 Identities=12% Similarity=0.097 Sum_probs=84.1
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
+..+++++-||+|+..|..+|+..+++.. ..++..-. . +...++-...||.+++.+...+... .+.-.-...
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~---~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---Y---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE---E---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE---E---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence 44566677777777777777777777653 22232210 0 1234556667787777765444321 221100000
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
.+-.. ....+++|+...++.+.|..+|+.+.++..... . ++ .+.+ + ...|.
T Consensus 283 --~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~-----------v~-------~~~~---~----~~~l~ 333 (445)
T 2ovr_B 283 --YSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-L-----------TS-------GMEL---K----DNILV 333 (445)
T ss_dssp --EEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS-C-----------EE-------EEEE---E----TTEEE
T ss_pred --EEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc-c-----------EE-------EEEE---e----CCEEE
Confidence 00111 244688888888899999999998888753321 0 10 0111 1 12677
Q ss_pred EEeeeEEEEEecCCCCceEEEEE
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
.+-.|-+|..+|..+++....+.
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC
T ss_pred EEeCCCeEEEEECCCCcEEEEEc
Confidence 78788888888888888776654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.33 E-value=0.44 Score=50.77 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=72.7
Q ss_pred CCeEEEEeeCCeEEEEecCCCe-eeeEecC-CCceeeccccc--cCCCCccccccCCCCceeEEeccccCc--eeecccC
Q 002343 48 PDVALVAALDGTIHLVDTKLGK-IRWSFGT-GRPIYSSYQAS--FNSNASEFYLDVDEDWELYFHSKRFGK--MKKLSSS 121 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~-~~W~~~~-~~~i~~~~~~~--~~~~~~~~~l~~~~d~~ly~~~~~~g~--~~klp~t 121 (934)
+..+++++.||+|+..|..+++ ...++.. ..++..-...+ .-..+...++-...||.+++.+-..+. +..+.-.
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 5889999999999999999998 8888873 33343321100 011123466777889998888765543 2222110
Q ss_pred HHH---H---HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 122 AEE---Y---IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 122 i~e---~---v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
-.+ - +.-+|+.++|| .+++|+...++.+.|.++|+.+.....
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC
Confidence 000 0 01223355666 677898889999999999998776543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=91.18 E-value=2.6 Score=44.67 Aligned_cols=153 Identities=13% Similarity=0.122 Sum_probs=94.2
Q ss_pred CeEEEEe-e--CCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHHH
Q 002343 49 DVALVAA-L--DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAEE 124 (934)
Q Consensus 49 ~~~lvst-l--dG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~e 124 (934)
+.|.||+ + +++|+.||..||++.=++.-++-.... . .+-....+|.-.-.++.++..+...+ .+..+|+..+
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fge-G--i~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~- 107 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGE-G--LTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK- 107 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEE-E--EEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS-
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceE-E--EEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC-
Confidence 6888887 3 589999999999999988754422211 0 01011246666666777777765443 3445655411
Q ss_pred HHhcCCe-eecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 125 YIRRMPY-ISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 125 ~v~~sP~-~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
-+. .+.|| -+|+..-.+++.+||++|.+++++...... .-|....+++... + .
T Consensus 108 ----~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-------------~~p~~~~nele~~---d-----g 162 (266)
T 2iwa_A 108 ----DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-------------GHRVIRLNELEYI---N-----G 162 (266)
T ss_dssp ----SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-------------TEECCCEEEEEEE---T-----T
T ss_pred ----CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-------------CcccccceeEEEE---C-----C
Confidence 122 56675 688877789999999999999999875321 0011111222211 1 1
Q ss_pred eEEEEee-eEEEEEecCCCCceEEEEEee
Q 002343 203 LVYIMRT-DYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 203 ~i~i~Rt-dY~v~~~~~~s~~~~WN~t~~ 230 (934)
.||...- +=.|..+|+++|++.=.+.+.
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 4676651 237889999999976555554
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=91.17 E-value=0.96 Score=54.00 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=66.7
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEecccc-----CceeecccCHH
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF-----GKMKKLSSSAE 123 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~-----g~~~klp~ti~ 123 (934)
..++++ .||+|+.+|..+|++.-....+..+... +...+.+.-.| ..|+.||+.+... |..+++-..-.
T Consensus 93 ~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~--~~SpdG~~la~---~~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASL--DFSPVGDRVAY---VRNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTC--EECTTSSEEEE---EETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred CeEEEE-ECCEEEEEECCCCceEEccCCcccccCC--cCCCCCCEEEE---EECCeEEEEecCcccccCCCcEEeccCCC
Confidence 555544 7899999999999887655543333222 11122111133 3578999987766 66655543322
Q ss_pred HHH-------------hcCCeeecCCc-eEeec---------------------------------eeeEEEEEeCCCce
Q 002343 124 EYI-------------RRMPYISKDGG-VTLGA---------------------------------MKTSVFLVDVKSGR 156 (934)
Q Consensus 124 e~v-------------~~sP~~s~Dg~-~~~G~---------------------------------k~~t~f~vd~~tG~ 156 (934)
.-+ ..++..|+||- |+.++ ...+++++|.+||+
T Consensus 167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 167 ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 112 26788999993 44443 55789999999998
Q ss_pred EEEEE
Q 002343 157 VVDNY 161 (934)
Q Consensus 157 ~~~~~ 161 (934)
.....
T Consensus 247 ~~~~~ 251 (706)
T 2z3z_A 247 TVYLQ 251 (706)
T ss_dssp EEECC
T ss_pred eEeec
Confidence 76553
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=91.15 E-value=1.2 Score=48.00 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=92.9
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
+..++.++-||+|+..|..+|+..-+|.. ..++.+-. -.++...++-...||.+.+.+...|...+ .++..+--
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~----~~~~~~~l~sg~~d~~v~~wd~~~~~~~~-~~~~h~~~ 228 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS----LAPDTRLFVSGACDASAKLWDVREGMCRQ-TFTGHESD 228 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTCSEEE-EECCCSSC
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEE----ECCCCCEEEEEeCCCcEEEEECCCCeeEE-EEcCCcCC
Confidence 45578899999999999999999998863 22333210 11122466777788888887765554321 11111000
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
-.+=++++|| .+.+|+...++.+-|.++|+.+.++..... .++.. .-...| . ...|.
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~-------------~~~v~--~~~~s~----~---g~~l~ 286 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI-------------ICGIT--SVSFSK----S---GRLLL 286 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC-------------CSCEE--EEEECT----T---SSEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc-------------ccceE--EEEECC----C---CCEEE
Confidence 0122456666 688899999999999999999988764321 11000 000111 1 12778
Q ss_pred EEeeeEEEEEecCCCCceE
Q 002343 206 IMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~ 224 (934)
.+-.|-.|..+|..++...
T Consensus 287 ~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 287 AGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EEETTSEEEEEETTTCCEE
T ss_pred EECCCCeEEEEEcccCcEe
Confidence 8888888888888777654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=91.07 E-value=0.52 Score=55.27 Aligned_cols=114 Identities=12% Similarity=0.053 Sum_probs=68.5
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCce-----eecc----ccccCCCCccccccCCCCceeEEeccccCcee
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPI-----YSSY----QASFNSNASEFYLDVDEDWELYFHSKRFGKMK 116 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i-----~~~~----~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~ 116 (934)
....++|+. .||+|..+|..|+++..++...+.- +++. ......+...+|+-...||++...+-..++..
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 466777777 6999999999999999999863210 1110 00001111234555566777777654332211
Q ss_pred ecccCHHHHHhcCC---eeecCCc-eE-eeceeeEEEEEeCCCceEEEEEec
Q 002343 117 KLSSSAEEYIRRMP---YISKDGG-VT-LGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 117 klp~ti~e~v~~sP---~~s~Dg~-~~-~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
++ .+|+ +..-| .+|+||- +| .+...+++.+||.+||+++.++..
T Consensus 316 ~~-~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 316 TV-TSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EE-EEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred ee-EEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 10 0111 01112 5688994 45 456788999999999999999864
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=90.99 E-value=2.5 Score=44.15 Aligned_cols=155 Identities=14% Similarity=0.068 Sum_probs=92.3
Q ss_pred CCeEEEEe-eCC--eEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHH
Q 002343 48 PDVALVAA-LDG--TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAE 123 (934)
Q Consensus 48 ~~~~lvst-ldG--~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~ 123 (934)
++.|.+|| ++| +|+.+|..||++.=++.-++.....- .+..+..+|.=.-+++.++..+...+ .+..+|+.-+
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeG---i~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~ 106 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAG---IVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE 106 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEE---EEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSC
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeE---EEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC
Confidence 46777776 444 99999999999987776444332210 01111245555566667777665433 3445665421
Q ss_pred HHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccce
Q 002343 124 EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (934)
Q Consensus 124 e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (934)
--=+....+.||+..-.+.+.++||+|.+++++...... .-|....+|+-+. +. .
T Consensus 107 ----Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~-------------g~~~~~lNeLe~~---~G-----~ 161 (243)
T 3mbr_X 107 ----GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG-------------GRPLDNLNELEWV---NG-----E 161 (243)
T ss_dssp ----CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEET-------------TEECCCEEEEEEE---TT-----E
T ss_pred ----ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC-------------CcccccceeeEEe---CC-----E
Confidence 111223334788888889999999999999999876321 0111122222211 21 4
Q ss_pred EEEEe--eeEEEEEecCCCCceEEEEEeee
Q 002343 204 VYIMR--TDYVLQSTSQDSGEVLWNVAYAD 231 (934)
Q Consensus 204 i~i~R--tdY~v~~~~~~s~~~~WN~t~~~ 231 (934)
||..- ++ .|..+||++|++.=.+..+.
T Consensus 162 lyanvw~s~-~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 162 LLANVWLTS-RIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp EEEEETTTT-EEEEECTTTCBEEEEEECGG
T ss_pred EEEEECCCC-eEEEEECCCCCEEEEEECCc
Confidence 66654 44 78899999999865555443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=90.90 E-value=0.58 Score=49.68 Aligned_cols=112 Identities=11% Similarity=-0.046 Sum_probs=72.4
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCC-ceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGR-PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~-~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
+.+.++..-||+|+.+|..+|++...+..+. +... +... +...+|.-+..|+.+|..+...|.+....++...-.
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~---~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDT---AITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEE---EECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcceE---EEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence 3445566789999999999999998887432 1111 1112 122477777788899998876666411111111111
Q ss_pred hcCCeeecCCc-eEeeceee---EEEEEeCCCceEEEEEec
Q 002343 127 RRMPYISKDGG-VTLGAMKT---SVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 127 ~~sP~~s~Dg~-~~~G~k~~---t~f~vd~~tG~~~~~~~~ 163 (934)
.....+|+||- +|++...+ ++.++|.++|+.++++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 12256788985 66655553 999999999999998764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.73 E-value=0.22 Score=52.03 Aligned_cols=109 Identities=13% Similarity=0.134 Sum_probs=73.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
.+..+++++.||+|+..| +++....+. ...++..-. ...+ .. ++-...||.+++.+...+... .+.-.-.
T Consensus 154 ~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~--~~~~--~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 226 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA--VVDD--GH-FISCSNDGLIKLVDMHTGDVLRTYEGHES 226 (313)
T ss_dssp TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE--EEET--TE-EEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE--EcCC--Ce-EEEccCCCeEEEEECCchhhhhhhhcCCc
Confidence 577899999999999999 455555554 344443321 1111 12 667788999998876555432 2221000
Q ss_pred HHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 124 EYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 124 e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
--.+-+.++||.+++|+...++.+.|.++|+.++++...
T Consensus 227 --~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 227 --FVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp --CEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred --eEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEecc
Confidence 012345678999999999999999999999999998754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=90.50 E-value=1 Score=50.27 Aligned_cols=149 Identities=16% Similarity=0.165 Sum_probs=97.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
.+..+++++-||+|+..|..+++..+++.. ..++.+- . . ....++-...||.+++.+-..|... .+.-.-.
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~-~--~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~- 320 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-Q--F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS- 320 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE-E--E---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS-
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE-E--E---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc-
Confidence 467888999999999999999999999974 3344332 1 1 2245666778899888876555442 2211000
Q ss_pred HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceE
Q 002343 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (934)
Q Consensus 125 ~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (934)
.| .+ +.-.+..+++|+...++.+.|.++|+.++++....... . .+. .+ .+ + ...|
T Consensus 321 ~v-~~-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--------~-~v~-------~~--~~-~----~~~l 375 (445)
T 2ovr_B 321 LT-SG-MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ--------S-AVT-------CL--QF-N----KNFV 375 (445)
T ss_dssp CE-EE-EEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS--------S-CEE-------EE--EE-C----SSEE
T ss_pred cE-EE-EEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCC--------C-CEE-------EE--EE-C----CCEE
Confidence 00 00 11135588999999999999999999999986432110 0 010 01 11 1 1267
Q ss_pred EEEeeeEEEEEecCCCCceEEEE
Q 002343 205 YIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 205 ~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
..+-.|-+|..+|.++|+....+
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEeCCCeEEEEECCCCceeeee
Confidence 88888889999999888877665
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.16 E-value=1.5 Score=46.69 Aligned_cols=164 Identities=10% Similarity=0.048 Sum_probs=91.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
....+++++.||+|+.+|..+|+...++.. ..+|..-.. .. +...++-...||.+++.+-..|... .++..-
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-- 116 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV--DC--FTKYCVTGSADYSIKLWDVSNGQCVATWKSPV-- 116 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE--CT--TSSEEEEEETTTEEEEEETTTCCEEEEEECSS--
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE--cC--CCCEEEEEeCCCeEEEEECCCCcEEEEeecCC--
Confidence 567888889999999999999999999973 344433211 11 2246667788999999876555432 222110
Q ss_pred HHhcCCeeecCC-ceEeecee-----eEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccc
Q 002343 125 YIRRMPYISKDG-GVTLGAMK-----TSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLK 198 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~-----~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (934)
--.+-+.++|| .+++|... .++.+.|..++.....+.......... ...........+..+...
T Consensus 117 -~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~- 186 (369)
T 3zwl_B 117 -PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK--------IITHEGLDAATVAGWSTK- 186 (369)
T ss_dssp -CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE--------EECCTTCCCEEEEEECGG-
T ss_pred -CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee--------ccCCcCccceeEEEEcCC-
Confidence 11334566777 44455554 678888877775443333211100000 000000000111111111
Q ss_pred cccceEEEEeeeEEEEEecCCC-CceEEEEE
Q 002343 199 RIRQLVYIMRTDYVLQSTSQDS-GEVLWNVA 228 (934)
Q Consensus 199 ~~~~~i~i~RtdY~v~~~~~~s-~~~~WN~t 228 (934)
...|+.+-.|-.|..+|..+ +.....+.
T Consensus 187 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 215 (369)
T 3zwl_B 187 --GKYIIAGHKDGKISKYDVSNNYEYVDSID 215 (369)
T ss_dssp --GCEEEEEETTSEEEEEETTTTTEEEEEEE
T ss_pred --CCEEEEEcCCCEEEEEECCCCcEeEEEEe
Confidence 12778888888899999887 45544443
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.89 E-value=0.63 Score=50.85 Aligned_cols=154 Identities=8% Similarity=-0.041 Sum_probs=87.6
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-----CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-----GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA 122 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-----~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti 122 (934)
++.+++++-||+|++.|..+|+....+.. ..+|.+- ++.. ....++-...||.+.+.+-..|...+- +.-
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v--~~sp--dg~~l~sgs~d~~i~iwd~~~~~~~~~-~~~ 167 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTV--SVLS--SGTQAVSGSKDICIKVWDLAQQVVLSS-YRA 167 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEE--EECT--TSSEEEEEETTSCEEEEETTTTEEEEE-ECC
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEE--EECC--CCCEEEEEeCCCeEEEEECCCCcEEEE-EcC
Confidence 46788999999999999999887665531 2233221 0111 223556677788887776555543221 110
Q ss_pred H-HHHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccc
Q 002343 123 E-EYIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (934)
Q Consensus 123 ~-e~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (934)
. .-| .+=.++.|| ++.+|+...++.+-|.++|+.+.++....... .. .| ....|. +
T Consensus 168 h~~~V-~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~-------~~--~~------~~~~p~--~--- 226 (344)
T 4gqb_B 168 HAAQV-TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY-------LP--TS------LAWHPQ--Q--- 226 (344)
T ss_dssp CSSCE-EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC-------CE--EE------EEECSS--C---
T ss_pred cCCce-EEEEecCCCCCceeeeccccccccccccccceeeeeecceeec-------cc--ee------eeecCC--C---
Confidence 0 000 112345565 67889999999999999999998875432110 00 00 001111 1
Q ss_pred ccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 200 IRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 200 ~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
..+|..+-.|-+|..+|.++++....+.
T Consensus 227 -~~~l~sg~~dg~v~~wd~~~~~~~~~~~ 254 (344)
T 4gqb_B 227 -SEVFVFGDENGTVSLVDTKSTSCVLSSA 254 (344)
T ss_dssp -TTEEEEEETTSEEEEEESCC--CCEEEE
T ss_pred -CcceEEeccCCcEEEEECCCCcEEEEEc
Confidence 1256667777788888988888765544
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=89.82 E-value=1.9 Score=48.12 Aligned_cols=107 Identities=14% Similarity=0.182 Sum_probs=62.5
Q ss_pred CCCeEE-EEeeCCe--EEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCc--eeEEeccccCceeeccc
Q 002343 47 EPDVAL-VAALDGT--IHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDW--ELYFHSKRFGKMKKLSS 120 (934)
Q Consensus 47 ~~~~~l-vstldG~--~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~--~ly~~~~~~g~~~klp~ 120 (934)
....++ +++.||. |+.+|..+|++. .+.. +..+.+. ++..+.+ .++.-..+|| .||..+...|..+++.+
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~--~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~~~~l~~ 308 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEP--TWFPDSQ-NLAFTSDQAGRPQVYKVNINGGAPQRITW 308 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEE--EECTTSS-EEEEEECTTSSCEEEEEETTSSCCEECCC
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCcccce--EECCCCC-EEEEEECCCCCcEEEEEECCCCCEEEEec
Confidence 344444 4555665 999999998874 4433 2233322 1122211 2333333344 78888776666666654
Q ss_pred CHHHHHhcCCeeecCCc-eEeece---eeEEEEEeCCCceEEE
Q 002343 121 SAEEYIRRMPYISKDGG-VTLGAM---KTSVFLVDVKSGRVVD 159 (934)
Q Consensus 121 ti~e~v~~sP~~s~Dg~-~~~G~k---~~t~f~vd~~tG~~~~ 159 (934)
.-. -..+|..|+||- |+.++. ..+++++|..||+...
T Consensus 309 ~~~--~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 309 EGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV 349 (415)
T ss_dssp SSS--EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred CCC--cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE
Confidence 321 234789999993 344443 3689999999998843
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=89.72 E-value=2 Score=46.60 Aligned_cols=112 Identities=18% Similarity=0.106 Sum_probs=73.1
Q ss_pred CC-eEEEEeeCCeEEEEecCC----CeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-eeccc-
Q 002343 48 PD-VALVAALDGTIHLVDTKL----GKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSS- 120 (934)
Q Consensus 48 ~~-~~lvstldG~~~~v~~~s----g~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~- 120 (934)
.. ++++++.||+|+..|..+ +...-++....++.+-.. .. .....++-...||.+++.+-..+.. ..+..
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYF--NP-TDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEE--CT-TTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEE--cC-CCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 44 888899999999999998 777777765555554311 11 0224566677889988877544422 11110
Q ss_pred --CHH---HHH--hcC-------CeeecCCceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 121 --SAE---EYI--RRM-------PYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 121 --ti~---e~v--~~s-------P~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
... .-+ .-+ -..|+||-+ +|+...++.+.|.+||+.++++..
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECB
T ss_pred cccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecC
Confidence 000 000 001 235678877 999999999999999999999864
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=89.68 E-value=1.7 Score=45.75 Aligned_cols=155 Identities=12% Similarity=0.009 Sum_probs=91.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
.+..++.++.||.++..|..++...-....+..-....-++........++-+..|+.+++.+...+...+....-..-|
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v 218 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYL 218 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcE
Confidence 46778889999999999987665543333221111111111222222455677788888887665554422110000000
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
.+=++++|| .+++|+...++.+-|..+++.++.+..... ...++ ..| +..+.
T Consensus 219 -~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----------v~~~~--------~~~--------~~~~~ 271 (340)
T 4aow_A 219 -NTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI----------INALC--------FSP--------NRYWL 271 (340)
T ss_dssp -EEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC----------EEEEE--------ECS--------SSSEE
T ss_pred -EEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce----------EEeee--------cCC--------CCcee
Confidence 112456777 678899999999999999999999874321 00011 111 11455
Q ss_pred EEeeeEEEEEecCCCCceEEEEE
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
.+-+|-.|..+|.+++...+.+.
T Consensus 272 ~~~~d~~i~iwd~~~~~~~~~~~ 294 (340)
T 4aow_A 272 CAATGPSIKIWDLEGKIIVDELK 294 (340)
T ss_dssp EEEETTEEEEEETTTTEEEEEEC
T ss_pred eccCCCEEEEEECCCCeEEEecc
Confidence 66678888888888887777654
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=89.46 E-value=2.2 Score=48.38 Aligned_cols=136 Identities=10% Similarity=0.063 Sum_probs=87.7
Q ss_pred CCCCCCCCCCeEEEEeeC-----CeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCc
Q 002343 40 LPPPLPPEPDVALVAALD-----GTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGK 114 (934)
Q Consensus 40 ~~~~~~~~~~~~lvstld-----G~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~ 114 (934)
||| +....++|+.-+ |+|+.+|..|+++.+++..|.- + .+.-.||...||+-+...+.
T Consensus 79 ~p~---~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-------------P-gia~SpDgk~lyVan~~~~~ 141 (426)
T 3c75_H 79 APA---PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-------------P-HPVAAEDGSFFAQASTVFER 141 (426)
T ss_dssp CCC---CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-------------C-EEEECTTSSCEEEEEEEEEE
T ss_pred cCC---CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-------------C-ceEECCCCCEEEEEeccccc
Confidence 675 345667777664 7999999999999999997631 1 23335777788885321111
Q ss_pred eeecccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccC
Q 002343 115 MKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGV 194 (934)
Q Consensus 115 ~~klp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (934)
..-|...+++.+||+.|++++++....+... ......+. .--++|.
T Consensus 142 -----------------------~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r---~~~g~~P~-------~~~~spD- 187 (426)
T 3c75_H 142 -----------------------IARGKRTDYVEVFDPVTFLPIADIELPDAPR---FLVGTYQW-------MNALTPD- 187 (426)
T ss_dssp -----------------------TTEEEEEEEEEEECTTTCCEEEEEEETTCCC---CCBSCCGG-------GSEECTT-
T ss_pred -----------------------cccCCCCCEEEEEECCCCcEEEEEECCCccc---cccCCCcc-------eEEEcCC-
Confidence 1246678999999999999999987642110 00000010 0011111
Q ss_pred CccccccceEEEE-ee-eEEEEEecCCCCceEEEEEeeee
Q 002343 195 GNLKRIRQLVYIM-RT-DYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 195 ~~~~~~~~~i~i~-Rt-dY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
...+|+. ++ +=+|..+|.+++++.-.+.+...
T Consensus 188 ------Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~ 221 (426)
T 3c75_H 188 ------NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC 221 (426)
T ss_dssp ------SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE
T ss_pred ------CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc
Confidence 1278886 44 56899999999999998887543
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=89.36 E-value=1.3 Score=49.20 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=87.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCC-CceeeccccccCCCCccccccCCCCceeEEeccccCce----------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM---------- 115 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~---------- 115 (934)
....++.++-||+|+..|..+|...-+|... ..+..- . .......++-+..||.+.+.+...+..
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~-~---~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~ 278 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-R---PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV 278 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE-E---ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEE-E---ECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce
Confidence 4678899999999999999999988877632 222221 0 111224566777888877765433322
Q ss_pred -eecccCHHHHH---hc-----CCeee-cCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCC
Q 002343 116 -KKLSSSAEEYI---RR-----MPYIS-KDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDG 185 (934)
Q Consensus 116 -~klp~ti~e~v---~~-----sP~~s-~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (934)
..+-|+...-. .. ..... ....+.+|+...++.+-|.++|+.+.++..... . ...+
T Consensus 279 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-~--------v~~v----- 344 (410)
T 1vyh_C 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-W--------VRGV----- 344 (410)
T ss_dssp EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-C--------EEEE-----
T ss_pred EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC-c--------EEEE-----
Confidence 12222110000 00 00000 123689999999999999999999999864321 0 0001
Q ss_pred ccccccccCCccccccceEEEEeeeEEEEEecCCCCceE
Q 002343 186 YEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~ 224 (934)
.+.|+ ...|+-+-.|-+|..+|.++++..
T Consensus 345 ---~~~~~-------g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 345 ---LFHSG-------GKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp ---EECSS-------SSCEEEEETTTEEEEECCTTSCCC
T ss_pred ---EEcCC-------CCEEEEEeCCCeEEEEECCCCceE
Confidence 11111 125667777888888887776644
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=89.36 E-value=1.1 Score=47.52 Aligned_cols=106 Identities=12% Similarity=0.053 Sum_probs=72.7
Q ss_pred CCeEEEEe-eCCeEEEEecCCCeeeeEecCC-CceeeccccccCCCCccccccCCCCceeEEeccccC-ceeecccCHHH
Q 002343 48 PDVALVAA-LDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-KMKKLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-~~~klp~ti~e 124 (934)
++.+.+++ .+|++..+|..|+++.-+|..| |.=.. .+.+....|+-++ ++.|++.+.... .+.+++..-.
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~g-----lt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~- 147 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWG-----LATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYN- 147 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCE-----EEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEET-
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEE-----EEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCC-
Confidence 44565555 5789999999999999999876 21111 1212335777774 778999887433 3445554421
Q ss_pred HHhcCC-------eeecCCceEeec-eeeEEEEEeCCCceEEEEEecC
Q 002343 125 YIRRMP-------YISKDGGVTLGA-MKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 125 ~v~~sP-------~~s~Dg~~~~G~-k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
-.| ... ||.+|+.. ..+++.+||++||+++.+....
T Consensus 148 ---~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 148 ---GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp ---TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred ---CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 112 123 89999887 5789999999999999999864
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=89.32 E-value=1.2 Score=51.20 Aligned_cols=70 Identities=7% Similarity=-0.094 Sum_probs=39.3
Q ss_pred eeeecccCcEEEEEEEEec-CcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 478 NKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~-g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.+.|+.|-...+|+....+ ++.+.+|+....... ...+|...+...-.+.-..++++++. + .+|||+++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 3568888888999865443 478888876432211 12355553322222333467787773 2 259999887
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.23 E-value=1.1 Score=48.57 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=74.5
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
...++++++.||+|+..|..+++....+....++....-. ....+...++-...||.+++.+-..+... .+.- .+-
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~ 187 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMS-PVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG--HRQ 187 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC-SSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC--CCS
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEee-cCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC--CCC
Confidence 3557888899999999999999999999877666543211 11112235666778888888776544332 2211 000
Q ss_pred HhcCCeeecCC--ceEeeceeeEEEEEeCCCce-EEEEE
Q 002343 126 IRRMPYISKDG--GVTLGAMKTSVFLVDVKSGR-VVDNY 161 (934)
Q Consensus 126 v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~-~~~~~ 161 (934)
--.+-+.++|| ++++|+...++.+.|.++++ .+..+
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~ 226 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITL 226 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEEC
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccc
Confidence 01233567787 58899999999999999987 44444
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=89.11 E-value=2.2 Score=46.99 Aligned_cols=112 Identities=8% Similarity=0.018 Sum_probs=73.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCC--CCceeEEeccccCcee-ecccCH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVD--EDWELYFHSKRFGKMK-KLSSSA 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~--~d~~ly~~~~~~g~~~-klp~ti 122 (934)
....+++++-||+|+.+|..+++..+++.. ..++.+-. . .. +....+.-.+ .||.+++.+...|... .+.-.
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~-~-~p-~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~- 303 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA-W-CP-WQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG- 303 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE-E-CT-TSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE-E-CC-CCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-
Confidence 467888899999999999999999999963 33333221 0 11 1123444433 7999999887665432 22211
Q ss_pred HHHHhcCCeeecCC-ceEe--eceeeEEEEEeCCCceEEEEEecC
Q 002343 123 EEYIRRMPYISKDG-GVTL--GAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg-~~~~--G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
. --.+-+.++|| .+++ |....++.+.|..+|+........
T Consensus 304 ~--~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~ 346 (401)
T 4aez_A 304 S--QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP 346 (401)
T ss_dssp S--CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE
T ss_pred C--cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec
Confidence 0 01344567777 3444 888999999999999888876543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=89.11 E-value=4.6 Score=44.66 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=24.9
Q ss_pred CCCCeEEEEee--CCeEEEEecCCCeeeeE-ecCC
Q 002343 46 PEPDVALVAAL--DGTIHLVDTKLGKIRWS-FGTG 77 (934)
Q Consensus 46 ~~~~~~lvstl--dG~~~~v~~~sg~~~W~-~~~~ 77 (934)
|....++|+.. +++|..+| .+|++.-+ +..+
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 46778888874 58899999 99999988 7653
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=89.01 E-value=1.1 Score=49.89 Aligned_cols=110 Identities=13% Similarity=0.145 Sum_probs=71.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC--CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT--GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
...+++.++-||+|+..|..+|+..-++.. +++..... .. ....++-+..||.+.+.+...+... .+.-. .
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~---~~--~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-~ 192 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF---DH--SGKLLASCSADMTIKLWDFQGFECIRTMHGH-D 192 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE---CT--TSSEEEEEETTSCCCEEETTSSCEEECCCCC-S
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE---cC--CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC-C
Confidence 457888889999999999999999888873 33322221 11 2245667778888777654433221 11100 0
Q ss_pred HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 124 e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.-| .+=+.++|| .+++|+...++.+-|..||+.++++..
T Consensus 193 ~~V-~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 232 (410)
T 1vyh_C 193 HNV-SSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232 (410)
T ss_dssp SCE-EEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCE-EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC
Confidence 000 111345565 688999999999999999999999864
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=88.73 E-value=1.3 Score=49.46 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=73.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
.+..+++++-||+|+..|..+++...++.. ..++.+-. -......++-...||.+++.+-..|... .+.-. ..
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~ 353 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI----YDHERKRCISASMDTTIRIWDLENGELMYTLQGH-TA 353 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE----EETTTTEEEEEETTSCEEEEETTTTEEEEEECCC-SS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEE----EcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC-CC
Confidence 467899999999999999999999999973 33443321 1112245667788899888876555432 22110 00
Q ss_pred HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 125 ~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.| .+=..+ +..+++|+...++.+-|..+++.......
T Consensus 354 ~v-~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 390 (464)
T 3v7d_B 354 LV-GLLRLS-DKFLVSAAADGSIRGWDANDYSRKFSYHH 390 (464)
T ss_dssp CE-EEEEEC-SSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cE-EEEEEc-CCEEEEEeCCCcEEEEECCCCceeeeecC
Confidence 01 111122 56899999999999999999998877753
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=88.46 E-value=2 Score=46.71 Aligned_cols=153 Identities=18% Similarity=0.131 Sum_probs=93.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
.+..++.++-||+|+..|..+|+..-+|.. +..+..-.- ........++-...||.+++.+...|...+. +...+-
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~-~~~h~~ 241 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL--APSETGNTFVSGGCDKKAMVWDMRSGQCVQA-FETHES 241 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--CCCSSCCEEEEEETTSCEEEEETTTCCEEEE-ECCCSS
T ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE--EeCCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCC
Confidence 356788899999999999999998888863 233322111 1111224677788899998887665544221 111100
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceE
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (934)
--.+=+.++|| .+.+|+...++-+-|.++++.+..+....... + +. .....|. ...|
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~---------~-~~-----~~~~s~~-------g~~l 299 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF---------G-AS-----SVDFSLS-------GRLL 299 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS---------C-EE-----EEEECTT-------SSEE
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc---------c-ee-----EEEEeCC-------CCEE
Confidence 00112344565 78889999999999999999888876432100 0 00 0001111 1277
Q ss_pred EEEeeeEEEEEecCCCCceE
Q 002343 205 YIMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 205 ~i~RtdY~v~~~~~~s~~~~ 224 (934)
..+-.|.+|..+|..+|...
T Consensus 300 ~~g~~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKGSRV 319 (354)
T ss_dssp EEEETTSCEEEEETTTCSEE
T ss_pred EEEECCCcEEEEECCCCceE
Confidence 88888888888888777654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=88.24 E-value=5.2 Score=41.34 Aligned_cols=111 Identities=9% Similarity=0.103 Sum_probs=64.3
Q ss_pred CCeEEEEee--CCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 48 PDVALVAAL--DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvstl--dG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
++.++|++. ++.|+.+| .+|+..+++..+.. ..+...-.+ .+..+|+-+..++.++..+..-..+..+... .++
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~-~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-~~~ 163 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYGQFVRKFGATIL-QHPRGVTVD-NKGRIIVVECKVMRVIIFDQNGNVLHKFGCS-KHL 163 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTC-SCEEEEEEC-TTSCEEEEETTTTEEEEECTTSCEEEEEECT-TTC
T ss_pred CCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccC-CCceEEEEe-CCCCEEEEECCCCEEEEEcCCCCEEEEeCCC-Ccc
Confidence 566777775 88999998 67888888864321 111110011 1223666666677777765432222233211 000
Q ss_pred -HhcCCeeecCCceEee-ceeeEEEEEeCCCceEEEEEec
Q 002343 126 -IRRMPYISKDGGVTLG-AMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 126 -v~~sP~~s~Dg~~~~G-~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
....-++++||-+|+. .....++++|+ +|+.+.++..
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 202 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG 202 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence 0133467888988876 45778999997 6777777754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.75 E-value=2.4 Score=44.91 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=71.4
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-eeccc---C
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSS---S 121 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~---t 121 (934)
+....+++++-||+|+.+|..+++..+......++.+-...+. ......++-...||.+++.+-..+.. ..+++ .
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRK-DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCS-SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCC-CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 4678899999999999999999999999887667755311110 00224566677889888876533321 11110 0
Q ss_pred HHHHHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEE
Q 002343 122 AEEYIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVD 159 (934)
Q Consensus 122 i~e~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~ 159 (934)
...---.+-..++|| .+++|+...++.+-|.+++....
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 296 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRS 296 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC-
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccc
Confidence 000001233467787 58889998899999988775443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=87.64 E-value=2.3 Score=46.64 Aligned_cols=105 Identities=21% Similarity=0.142 Sum_probs=69.1
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEec---CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecc-cCHHH
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFG---TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLS-SSAEE 124 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~---~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp-~ti~e 124 (934)
.++++++.||+|+..|..+|+...++. ...++.+-.. .. +...++-...||.+++.+.+.|...+.- ..-..
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDW--SR--DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEE--CT--TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEE--CC--CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence 588888999999999999999999993 2334433211 11 2345666778999999887665443211 01000
Q ss_pred HHhcCCeeecCC-ceEee---ceeeEEEEEeCCCceE
Q 002343 125 YIRRMPYISKDG-GVTLG---AMKTSVFLVDVKSGRV 157 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G---~k~~t~f~vd~~tG~~ 157 (934)
-.-.+-+.++|| .+++| +...++.+.|.++++.
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 011234466777 56677 7889999999999875
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=87.47 E-value=0.8 Score=55.42 Aligned_cols=154 Identities=8% Similarity=0.033 Sum_probs=96.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
....+++++-||+|+..|..+|+...++.. ..++..... .. +...++-...||.+++.+-..|... .+.-. ..
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~--s~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~ 98 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKF--IA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-PD 98 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--EG--GGTEEEEEETTSEEEEEETTTCCEEEEEECC-SS
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEE--eC--CCCEEEEEeCCCeEEEEECCCCcEEEEEecC-CC
Confidence 577888899999999999999999999983 344433211 11 1234555567888888775555432 22210 00
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCc-eEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSG-RVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
.-.+.+.++|| .+.+|+...++.+-|..+| ..++++......- .|- ...|. + ..
T Consensus 99 -~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v-----------~~~------~~~p~--~----~~ 154 (814)
T 3mkq_A 99 -YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV-----------MCV------AFNPK--D----PS 154 (814)
T ss_dssp -CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE-----------EEE------EEETT--E----EE
T ss_pred -CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE-----------EEE------EEEcC--C----CC
Confidence 01345677888 6888999899999999998 6667665332110 110 01110 0 12
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEEEe
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
.|..+-.|=+|..+|..++...+.+..
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEec
Confidence 677777777888888877777666554
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=87.46 E-value=2.3 Score=46.08 Aligned_cols=111 Identities=9% Similarity=0.074 Sum_probs=74.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEecccc----Cceee-ccc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF----GKMKK-LSS 120 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~----g~~~k-lp~ 120 (934)
....+++++.||+|+..|. +|+..+++.. ...+.+- . ...+....++-+..||.+++.+-.. +...+ +..
T Consensus 174 ~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~-~--~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (383)
T 3ei3_B 174 SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHA-E--FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH 249 (383)
T ss_dssp TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEE-E--ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC
T ss_pred CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEE-E--ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC
Confidence 4678999999999999998 7888888873 3334332 1 1111112677888899998877644 32222 211
Q ss_pred CHHHHHhcCCeeec-CC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 121 SAEEYIRRMPYISK-DG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 121 ti~e~v~~sP~~s~-Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
+ ---.+.+.++ || .+++|+...++.+.|.++|+.++++...
T Consensus 250 ~---~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 250 E---KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp S---SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred C---CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 1 0113445667 77 7888999999999999999988887643
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=87.08 E-value=3.6 Score=43.19 Aligned_cols=156 Identities=14% Similarity=0.060 Sum_probs=93.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHH-HH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE-EY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~-e~ 125 (934)
....+++++.||+|+..+...+.....+........... .......++-...|+.+.+.+...+........-. +.
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVA---FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE---ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEE---EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 567888999999999999999999888875433322111 11122455666778888776543322212111110 00
Q ss_pred HhcCCeeecC---CceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 126 IRRMPYISKD---GGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 126 v~~sP~~s~D---g~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
| ..-..+.| ..+.+|+...++.+-|.++|+.+.++..... . ...++ +.| + ..
T Consensus 174 v-~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~-~--------v~~~~--------~s~---~----~~ 228 (340)
T 4aow_A 174 V-SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG-Y--------LNTVT--------VSP---D----GS 228 (340)
T ss_dssp E-EEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS-C--------EEEEE--------ECT---T----SS
T ss_pred c-cceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC-c--------EEEEE--------ECC---C----CC
Confidence 0 11122233 3567888888999999999999998853221 0 00011 111 1 12
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
.|+.+-.|-+|..+|..++.....+...
T Consensus 229 ~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 256 (340)
T 4aow_A 229 LCASGGKDGQAMLWDLNEGKHLYTLDGG 256 (340)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEECS
T ss_pred EEEEEeCCCeEEEEEeccCceeeeecCC
Confidence 6777888888999999888877665543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=86.97 E-value=0.65 Score=59.52 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=78.3
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
+....+++++-||+|+.+|..+|+...++.. ..++.+- . -.++...++-...||.+++.+-..|....+.-. .+
T Consensus 971 p~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l-~---~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~ 1045 (1249)
T 3sfz_A 971 PHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHI-Q---FTADGKTLISSSEDSVIQVWNWQTGDYVFLQAH-QE 1045 (1249)
T ss_dssp TTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCE-E---ECSSSSCEEEECSSSBEEEEETTTTEEECCBCC-SS
T ss_pred CCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEE-E---ECCCCCEEEEEcCCCEEEEEECCCCceEEEecC-CC
Confidence 3577899999999999999999999888763 2223221 0 111224566778899998887666554332211 00
Q ss_pred HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 125 ~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
--.+-..++||.+++|+...++.+.|..+|+.++++...
T Consensus 1046 -~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 1084 (1249)
T 3sfz_A 1046 -TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCH 1084 (1249)
T ss_dssp -CEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECC
T ss_pred -cEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEccc
Confidence 012234567999999999999999999999999998743
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.77 E-value=1.5 Score=48.70 Aligned_cols=118 Identities=14% Similarity=0.109 Sum_probs=76.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCH--
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA-- 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti-- 122 (934)
....+++++.||+|+..|..+++..-++. ...++..-...+.-..+...++-...||.+++.+-..|...+.-..-
T Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 225 ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSS
T ss_pred CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCC
Confidence 47789999999999999999999988775 34455432111111122346677788998888876555432111000
Q ss_pred -HHHHhcCC----------------------eeecCCceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 123 -EEYIRRMP----------------------YISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 123 -~e~v~~sP----------------------~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
...+.-+| +.+.+..|++|+...++.+-|.++|+.++++...
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 305 QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecc
Confidence 00011122 5562337999999999999999999999998753
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=86.60 E-value=0.6 Score=56.57 Aligned_cols=114 Identities=10% Similarity=0.121 Sum_probs=77.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCC--CceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG--RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~--~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
.+..+++++.||+|+..|..+++..+++..+ .++... +.........++-...||.+++.+...+... .+.-.-.
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 229 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYV--DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEE--EECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEE--EEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 3568888999999999999999999998864 333222 1112112346666778888888775544322 2211000
Q ss_pred HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 124 e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
--.+.+.++|| .+++|+...++.+.|..||+.++++...
T Consensus 230 --~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 230 --NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp --CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred --CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 01344577788 6888999899999999999999998654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=86.59 E-value=1.1 Score=52.34 Aligned_cols=110 Identities=16% Similarity=0.039 Sum_probs=71.6
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEecc--ccCce-eecccCHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSK--RFGKM-KKLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~--~~g~~-~klp~ti~e 124 (934)
+.++++...||+|..+|..||++..++..|...... ++.. +...+|.-+ .|+.+++.+. ..+.. ..++-...
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v--~~sp-dg~~l~v~~-~d~~V~v~D~~~~t~~~~~~i~~g~~- 223 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS--RMSA-SGRYLLVIG-RDARIDMIDLWAKEPTKVAEIKIGIE- 223 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEE--EECT-TSCEEEEEE-TTSEEEEEETTSSSCEEEEEEECCSE-
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcccceE--EECC-CCCEEEEEC-CCCeEEEEECcCCCCcEEEEEecCCC-
Confidence 445555667999999999999999999977663321 1112 122455544 4488888776 44432 23332100
Q ss_pred HHhcCCeeec----CC-ceEeece-eeEEEEEeCCCceEEEEEecC
Q 002343 125 YIRRMPYISK----DG-GVTLGAM-KTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 125 ~v~~sP~~s~----Dg-~~~~G~k-~~t~f~vd~~tG~~~~~~~~~ 164 (934)
..+=.+|+ || .+|+|+- ..++.++|..||+.++++...
T Consensus 224 --p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 224 --ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp --EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred --cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 01223566 87 6888885 688999999999999998753
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=86.38 E-value=2.3 Score=47.35 Aligned_cols=149 Identities=11% Similarity=0.023 Sum_probs=82.8
Q ss_pred EeeCCeEEEEecCCC-eeeeEecCCCceeecc--ccccC--CCCccccccCCCCceeEEeccccCcee-ecccCHHHHHh
Q 002343 54 AALDGTIHLVDTKLG-KIRWSFGTGRPIYSSY--QASFN--SNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (934)
Q Consensus 54 stldG~~~~v~~~sg-~~~W~~~~~~~i~~~~--~~~~~--~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~v~ 127 (934)
-..||..-+.-...| -..|...++..+..-. ..... ......++-...||.+++.+-..|... .+.-.-...
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-- 216 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV-- 216 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE--
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE--
Confidence 345887777755555 4579999988876521 10000 001234455567777777665544332 221100000
Q ss_pred cCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEE
Q 002343 128 RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM 207 (934)
Q Consensus 128 ~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 207 (934)
.+-.. +++.+++|+...++.+.|..+|+.+.......... . .+. .+.. +. ..|+.+
T Consensus 217 ~~l~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------~-~v~-------~~~~---~~----~~l~s~ 272 (435)
T 1p22_A 217 LHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR--------A-AVN-------VVDF---DD----KYIVSA 272 (435)
T ss_dssp EEEEC-CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS--------S-CEE-------EEEE---ET----TEEEEE
T ss_pred EEEEE-cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC--------C-cEE-------EEEe---CC----CEEEEE
Confidence 00111 36789999999999999999998763322111000 0 010 0111 11 267888
Q ss_pred eeeEEEEEecCCCCceEEEEE
Q 002343 208 RTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 208 RtdY~v~~~~~~s~~~~WN~t 228 (934)
-.|-+|..+|..+++....+.
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCeEEEEECCcCcEEEEEc
Confidence 888889999998888776554
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.11 E-value=3.2 Score=43.87 Aligned_cols=118 Identities=8% Similarity=-0.046 Sum_probs=70.7
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecc------------------------------ccccCCC----
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY------------------------------QASFNSN---- 91 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~------------------------------~~~~~~~---- 91 (934)
+....+++++.||+|+..|..+++...++.....+.... +......
T Consensus 139 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (368)
T 3mmy_A 139 PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCV 218 (368)
T ss_dssp SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEE
T ss_pred CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceE
Confidence 346678888999999999999999888877544322100 0000000
Q ss_pred --------CccccccCCCCceeEEeccccCceeecccCHHHH--------------HhcCCeeecCC-ceEeeceeeEEE
Q 002343 92 --------ASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY--------------IRRMPYISKDG-GVTLGAMKTSVF 148 (934)
Q Consensus 92 --------~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~--------------v~~sP~~s~Dg-~~~~G~k~~t~f 148 (934)
....++-...||.+.+.+-..+...+..+++..- --.+-+.++|| .|++|+...++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~ 298 (368)
T 3mmy_A 219 AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFS 298 (368)
T ss_dssp EEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEE
T ss_pred EEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEE
Confidence 0012555666776666544332110001110000 01233567787 889999999999
Q ss_pred EEeCCCceEEEEEec
Q 002343 149 LVDVKSGRVVDNYVL 163 (934)
Q Consensus 149 ~vd~~tG~~~~~~~~ 163 (934)
+-|.++|+.++++..
T Consensus 299 iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 299 FWDKDARTKLKTSEQ 313 (368)
T ss_dssp EEETTTTEEEEECCC
T ss_pred EEECCCCcEEEEecC
Confidence 999999999998764
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=85.86 E-value=1.7 Score=55.60 Aligned_cols=156 Identities=12% Similarity=0.079 Sum_probs=98.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
....+++++-||+|+..|..+|+...++.. ..++.+- ++.. ....++-...||.+.+.+...|... .+.-.-.
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~--~~s~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~- 700 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC--AFSS--DDSYIATCSADKKVKIWDSATGKLVHTYDEHSE- 700 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE--EECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEE--EEec--CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC-
Confidence 566788889999999999999999999873 2333221 1111 2235566678888888776655442 2211000
Q ss_pred HHhcCCeeecCC---ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccccc
Q 002343 125 YIRRMPYISKDG---GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (934)
Q Consensus 125 ~v~~sP~~s~Dg---~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (934)
--.+-+.++|+ .+.+|+...++.+-|..+|+.+.++..... . ...++ +.| . .
T Consensus 701 -~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-~--------v~~~~--------~sp----~---~ 755 (1249)
T 3sfz_A 701 -QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-S--------VNHCR--------FSP----D---D 755 (1249)
T ss_dssp -CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-C--------EEEEE--------ECS----S---T
T ss_pred -cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC-C--------EEEEE--------Eec----C---C
Confidence 00112334433 688999999999999999999998764321 0 00011 111 1 1
Q ss_pred ceEEEEeeeEEEEEecCCCCceEEEEEeeee
Q 002343 202 QLVYIMRTDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 202 ~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
..|..+-.|-+|..+|..++.....+....+
T Consensus 756 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 786 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRSANERKSINVKRF 786 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGGTEEEEEEECCCC
T ss_pred CEEEEEECCCeEEEEeCCCCcccceeccccc
Confidence 2677777788889999888888777765543
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=85.66 E-value=1.7 Score=46.58 Aligned_cols=153 Identities=7% Similarity=-0.067 Sum_probs=87.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec---CCCceeeccccccCCCCccccccCCCCceeEEeccccCc----eeecc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG---TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGK----MKKLS 119 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~---~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~----~~klp 119 (934)
....+++++-||+|+.+|..+++..-.+. .+.++..-. ... ....++-...||.+++.+-..+. .+.+.
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~--~~~--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~ 138 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVR--WAP--NEKKFAVGSGSRVISICYFEQENDWWVCKHIK 138 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEE--ECT--TSSEEEEEETTSSEEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEE--ECC--CCCEEEEEeCCCEEEEEEecCCCcceeeeeee
Confidence 46788889999999999999998655543 233333211 011 12345556677887775443332 11111
Q ss_pred cCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeC------------------CCceEEEEEecCCCCCCCCCCCCCCCcc
Q 002343 120 SSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDV------------------KSGRVVDNYVLDFSASTPGFQSDENKHV 180 (934)
Q Consensus 120 ~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~------------------~tG~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (934)
..-..- -.+-+.++|| .+++|+...++.+.|. .+|+.++++...... ...+
T Consensus 139 ~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~ 208 (372)
T 1k8k_C 139 KPIRST-VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW---------VHGV 208 (372)
T ss_dssp TTCCSC-EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC---------EEEE
T ss_pred cccCCC-eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe---------EEEE
Confidence 100000 0223455666 6888999999999994 478888877532110 0001
Q ss_pred ccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 181 VPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
+ ..| . ...|+.+-.|-.|..+|.++++....+.
T Consensus 209 ~--------~~~----~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 209 C--------FSA----N---GSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp E--------ECS----S---SSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred E--------ECC----C---CCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 1 111 1 1267777788888888888777665443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=85.58 E-value=4.5 Score=43.11 Aligned_cols=112 Identities=15% Similarity=0.085 Sum_probs=69.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec---C--CCceeeccccccCCCCccccccCCCCceeEEeccc----------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG---T--GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKR---------- 111 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~---~--~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~---------- 111 (934)
....+++++-||+|+.+|..+++..|... . ...+.+-. -.++...++-...||.+++.+-.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 182 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD----WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 182 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE----ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCC
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE----EcCCCCEEEEEcCCCCEEEEEcccccccccccc
Confidence 46788889999999998888877544332 1 22232210 01112355666778888887621
Q ss_pred --------cCce-eecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 112 --------FGKM-KKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 112 --------~g~~-~klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
.+.. ..+. ..+---.+-+.++|| .+++|+...++.+.|.++|+.++++...
T Consensus 183 ~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 183 TPWGSKMPFGELMFESS--SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp BTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred cccccccchhhheEecC--CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 2322 1221 110011344667788 8899999999999999999999998743
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=85.58 E-value=4.7 Score=43.96 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=78.6
Q ss_pred CCCCeEEEEe--eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCH
Q 002343 46 PEPDVALVAA--LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSA 122 (934)
Q Consensus 46 ~~~~~~lvst--ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti 122 (934)
|...++++++ .||+|+..|..+++...++..+..|++- ++..+ ...+.-. -|+.+.......|.. .+....-
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v--~fspd--g~~l~s~-s~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDL--HFSTD--GKVVAYI-TGSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEE--EECTT--SSEEEEE-CSSCEEEEETTTCCEEEEECCCC
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEE--EEccC--CceEEec-cceeEEEEEeccCcceeeeecCC
Confidence 3456666666 7999999999999999999876666542 11111 1112222 233344433322222 1111111
Q ss_pred HHHHhcCCeeecCCc-eEeece----eeEEEEEeCCCceEE--EEEecCCCCCCCCCCCCCCCccccCCCccccccccCC
Q 002343 123 EEYIRRMPYISKDGG-VTLGAM----KTSVFLVDVKSGRVV--DNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVG 195 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg~-~~~G~k----~~t~f~vd~~tG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (934)
..-.-.+=.+|+||- +.+|+. ..++...|.+++... +.....+.. .. +.. -.+.|
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~-V~~-----~~~Sp--- 279 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF---------KG-ITS-----MDVDM--- 279 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC---------SC-EEE-----EEECT---
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC---------CC-eEe-----EEECC---
Confidence 110012234577883 344443 336677777766542 222211110 00 100 00111
Q ss_pred ccccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 196 NLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 196 ~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
+ ...|..+-.|-+|..+|..+++..-.+
T Consensus 280 d----g~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 280 K----GELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp T----SCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred C----CCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 1 127788888889999999888876554
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=85.11 E-value=3.5 Score=48.60 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=70.9
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccc--cCce-eecccCHHHHH
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKR--FGKM-KKLSSSAEEYI 126 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~--~g~~-~klp~ti~e~v 126 (934)
+.++...||+|..+|..|+++.+++..|...... + .+-+...+|+- .+|+.++..+.. .+++ .+++ +
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v--~-~SpDGr~lyv~-~~dg~V~viD~~~~t~~~v~~i~------~ 238 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS--R-LSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIK------I 238 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEE--E-ECTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEE------C
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccce--E-ECCCCCEEEEE-cCCCeEEEEECCCCCCcEeEEEe------c
Confidence 3444446899999999999999999988654422 1 12122346654 468899998763 3322 2333 1
Q ss_pred hcCC---eee----cCC-ceEeecee-eEEEEEeCCCceEEEEEecCC
Q 002343 127 RRMP---YIS----KDG-GVTLGAMK-TSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 127 ~~sP---~~s----~Dg-~~~~G~k~-~t~f~vd~~tG~~~~~~~~~~ 165 (934)
...| .+| +|| .+|++... .++.++|+.|++.+++....+
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc
Confidence 2234 356 488 67776655 788899999999999988643
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.11 E-value=0.69 Score=50.61 Aligned_cols=155 Identities=12% Similarity=0.044 Sum_probs=89.8
Q ss_pred CCeEEEEeeCCeEEEEecCCCe------eeeEec----CCCceeeccccccCCCCccccccCCCCceeEEeccccCce-e
Q 002343 48 PDVALVAALDGTIHLVDTKLGK------IRWSFG----TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-K 116 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~------~~W~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~ 116 (934)
+.++++++.||+|+..|..+++ ....+. ...++.+-. ...+....++-...||.+++.+-..+.. .
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA---WNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE---ECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE---eCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 6788889999999999999987 444441 122222210 1111124567778899998887655433 2
Q ss_pred ecccCHH----HHHhcCCeeecCC--ceEeeceee---EEEEEeCCCc-eEEEEEe-cCCCCCCCCCCCCCCCccccCCC
Q 002343 117 KLSSSAE----EYIRRMPYISKDG--GVTLGAMKT---SVFLVDVKSG-RVVDNYV-LDFSASTPGFQSDENKHVVPVDG 185 (934)
Q Consensus 117 klp~ti~----e~v~~sP~~s~Dg--~~~~G~k~~---t~f~vd~~tG-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 185 (934)
.+....+ +---.+-+.++|| .+++|+... ++.+.|.++| +.++++. .... ....+
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~v~~~----- 268 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK---------GILSL----- 268 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS---------CEEEE-----
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC---------ceeEE-----
Confidence 3322110 0001334567776 688888877 8999999987 4444432 1110 00001
Q ss_pred ccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 186 YEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
...|. + ...|..+-.|-+|..+|.++++....+.
T Consensus 269 ---~~s~~--~----~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 269 ---DWCHQ--D----EHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp ---EECSS--C----SSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred ---EeCCC--C----CCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 11110 1 1267788888899999998887765544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.07 E-value=1.3 Score=47.67 Aligned_cols=113 Identities=11% Similarity=0.046 Sum_probs=62.6
Q ss_pred EEEEeeCCeEEEEecCCCeeeeEecCCCceeeccc---cc----cCCC--CccccccCCCCceeEEeccccCceeecccC
Q 002343 51 ALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ---AS----FNSN--ASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (934)
Q Consensus 51 ~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~---~~----~~~~--~~~~~l~~~~d~~ly~~~~~~g~~~klp~t 121 (934)
++.++-||+|++.+.......|.+.++..+..... .. .-.+ ....++-...||.+++.+-..|...++-..
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 44455555555555554444455555554433210 00 0011 123556677889888887666555332111
Q ss_pred HHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEE-EEEec
Q 002343 122 AEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVV-DNYVL 163 (934)
Q Consensus 122 i~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~-~~~~~ 163 (934)
-.+---.+=..++|| .+.+|+...++.+.|.++|+.+ .++..
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 100001223567788 5566999999999999999987 66653
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=85.07 E-value=8 Score=42.36 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=66.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~ 125 (934)
....++.++.||+|+..|..+|+...++.....+....- .. .....++-...||.+.+.+...|.+. ++.......
T Consensus 176 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~--~~-~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 252 (393)
T 1erj_A 176 SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV--SP-GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 252 (393)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE--CS-TTCCEEEEEETTSCEEEEETTTCCEEEEEC------
T ss_pred CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE--EC-CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC
Confidence 467888899999999999999999998876555543211 11 12235566777888888776555432 232111110
Q ss_pred H-h----cCCeeecCC-ceEeeceeeEEEEEeCCCceEEE
Q 002343 126 I-R----RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVD 159 (934)
Q Consensus 126 v-~----~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~ 159 (934)
. + .+-++++|| .+++|+...++.+-|.+++....
T Consensus 253 ~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 0 0 123456777 68889999999999988765443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=85.04 E-value=10 Score=40.83 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=82.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCC--CceeeccccccCCCCccccccCCCCceeEEeccccC-------ceee
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTG--RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFG-------KMKK 117 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~--~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g-------~~~k 117 (934)
....++.++.||+|+..|..+++..-++... .+.... +.. ....++-.+.|+.+.+..-..+ ..+.
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~---~sp--~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~ 149 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACA---YAP--SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKS 149 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEE---ECT--TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEE---ECC--CCCEEEEeeCCCCEEEEEEecccccccccccee
Confidence 4678889999999999999999887776531 111111 011 1123344445555444321110 0000
Q ss_pred cccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCc
Q 002343 118 LSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGN 196 (934)
Q Consensus 118 lp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (934)
+..-- ..| .+=..++|| .+++|+...++.+-|..+|+.++++...... . .|- .+.|...
T Consensus 150 ~~~h~-~~v-~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~---------v--~~~------~~~~~~~- 209 (354)
T 2pbi_B 150 VAMHT-NYL-SACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGAD---------V--LCL------DLAPSET- 209 (354)
T ss_dssp EEECS-SCE-EEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC---------E--EEE------EECCCSS-
T ss_pred eeccC-CcE-EEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC---------e--EEE------EEEeCCC-
Confidence 00000 000 111234555 6889999999999999999999998743311 0 110 0111110
Q ss_pred cccccceEEEEeeeEEEEEecCCCCceEE
Q 002343 197 LKRIRQLVYIMRTDYVLQSTSQDSGEVLW 225 (934)
Q Consensus 197 ~~~~~~~i~i~RtdY~v~~~~~~s~~~~W 225 (934)
...|+.+-.|-+|..+|.+++...-
T Consensus 210 ----g~~l~sgs~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 210 ----GNTFVSGGCDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp ----CCEEEEEETTSCEEEEETTTCCEEE
T ss_pred ----CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 1267777777788888887776543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.01 E-value=1.9 Score=45.66 Aligned_cols=110 Identities=8% Similarity=0.034 Sum_probs=71.4
Q ss_pred CCeEEEEeeCCeEEEEecCC-Ceee-eEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHH
Q 002343 48 PDVALVAALDGTIHLVDTKL-GKIR-WSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE 123 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~s-g~~~-W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~ 123 (934)
...+++++-||+|+..|..+ +... -.+. .+++..... .. +...++-...||.+++.+-..+...++.-.-.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~---~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 128 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW---SD--DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA 128 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE---CT--TSSEEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE---Cc--CCCEEEEEcCCCcEEEEEcCCCCceeeccccC
Confidence 36888889999999999887 5543 4443 333332221 11 22456667789999888776665544322111
Q ss_pred HHHhcCCee--ecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 124 EYIRRMPYI--SKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 124 e~v~~sP~~--s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
.. .+-+. ++|| .+++|+...++.+.|.++|+.+.++...
T Consensus 129 ~v--~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 129 PV--KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp CE--EEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred ce--EEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 01 11122 6677 5889999999999999999999998754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=85.01 E-value=2.5 Score=46.57 Aligned_cols=111 Identities=22% Similarity=0.238 Sum_probs=73.1
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
....+++++.||+|+..|..+++..-.+.. ..++.+-. +.. ....++-...||.+.+.+-..|... .-++..+-
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~--~~p--~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~~~~ 208 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLD--YFP--SGDKLVSGSGDRTVRIWDLRTGQCS-LTLSIEDG 208 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE--ECT--TSSEEEEEETTSEEEEEETTTTEEE-EEEECSSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEE--EcC--CCCEEEEecCCCcEEEEECCCCeeE-EEEEcCCC
Confidence 467888889999999999999998888763 33343321 011 2245667788999888776555432 11111110
Q ss_pred HhcCCeeec-CC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 126 IRRMPYISK-DG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 126 v~~sP~~s~-Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
| .+-+.++ || .+.+|+...++.+-|.++|+.++.+..
T Consensus 209 v-~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~ 247 (393)
T 1erj_A 209 V-TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 247 (393)
T ss_dssp E-EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-
T ss_pred c-EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc
Confidence 1 1223444 66 678899999999999999999988753
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=84.44 E-value=2.8 Score=46.90 Aligned_cols=157 Identities=11% Similarity=0.007 Sum_probs=93.2
Q ss_pred CCCeE-EEEeeCCeEEEEecC--CCeeeeEecC---CCceeeccccccCCCCccccccCCCCceeEEeccccCceee-cc
Q 002343 47 EPDVA-LVAALDGTIHLVDTK--LGKIRWSFGT---GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKK-LS 119 (934)
Q Consensus 47 ~~~~~-lvstldG~~~~v~~~--sg~~~W~~~~---~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~k-lp 119 (934)
....+ ++++-||+|+++|.. +|+..-.+.. +..+..- ++.. ....++-...||.+|...-..+...+ ..
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~--~~sp--~~~~l~~~~~~g~v~~~~~~~~~~~~~~~ 188 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAI--SIAE--DDTTVIIADKFGDVYSIDINSIPEEKFTQ 188 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEE--EECT--TSSEEEEEETTSEEEEEETTSCCCSSCCC
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEE--EEcC--CCCEEEEEeCCCcEEEEecCCcccccccc
Confidence 45554 556689999999988 8888777742 2222221 0111 12344455668888887654443321 11
Q ss_pred cCHH--HHHhcCCeeecC---C-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcccccccc
Q 002343 120 SSAE--EYIRRMPYISKD---G-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESG 193 (934)
Q Consensus 120 ~ti~--e~v~~sP~~s~D---g-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (934)
.++. .---.+-+.++| | .+++|+...++.+.|..+|+.+.++...-... +. +..
T Consensus 189 ~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-----------v~---------~~~ 248 (450)
T 2vdu_B 189 EPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-----------VS---------SIC 248 (450)
T ss_dssp CCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-----------EE---------EEE
T ss_pred eeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-----------eE---------EEE
Confidence 1111 000022357888 7 78899999999999999999988853221100 00 011
Q ss_pred CCccccccceEEEEeeeEEEEEecCCCCceEEEEEeee
Q 002343 194 VGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYAD 231 (934)
Q Consensus 194 ~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~ 231 (934)
+.+. ..|+.+-.|-+|..+|..+|+..-.+...+
T Consensus 249 ~sd~----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 282 (450)
T 2vdu_B 249 CGKD----YLLLSAGGDDKIFAWDWKTGKNLSTFDYNS 282 (450)
T ss_dssp ECST----TEEEEEESSSEEEEEETTTCCEEEEEECHH
T ss_pred ECCC----CEEEEEeCCCeEEEEECCCCcEeeeecchh
Confidence 1111 267788888899999999998877665544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=84.41 E-value=2.1 Score=46.05 Aligned_cols=106 Identities=11% Similarity=0.004 Sum_probs=68.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC--CCceeeccccccCCCCccccccCCCCceeEEeccccCcee--ecccCH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT--GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK--KLSSSA 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~--klp~ti 122 (934)
.+..++.++.||+|+..|..+|+....+.. +.++.+- + -.+....+.-...||.+++.+-..+... .+..
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~--~--~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-- 211 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG--V--LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-- 211 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE--E--ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC--
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE--E--ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec--
Confidence 467888899999999999999999776642 2233221 0 1112235555678898888876665432 3322
Q ss_pred HHHHhcCC----eeecCC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 123 EEYIRRMP----YISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 123 ~e~v~~sP----~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
-+..| ++++|| .|.+|+ .+++.+-|.++++.++++.
T Consensus 212 ---~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 212 ---DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp ---CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSC
T ss_pred ---cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeec
Confidence 01233 357788 466677 5699999999998765543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=84.41 E-value=1.7 Score=46.01 Aligned_cols=112 Identities=9% Similarity=0.125 Sum_probs=71.7
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCC--ceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGR--PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~--~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e 124 (934)
+.+++.++.||+|+..|..++....++..+. .+... ......+...++-...||.+.+.+-..+... .+.---.
T Consensus 153 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~- 229 (304)
T 2ynn_A 153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYV--DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS- 229 (304)
T ss_dssp TTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEE--EECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS-
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEE--EEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC-
Confidence 4678889999999999999988888876543 22211 1111112245666778888877665444321 1211000
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
-| .+=+.++|| .+.+|+..-++.+-|.+||+.++++..
T Consensus 230 ~v-~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 230 NV-SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp CE-EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CE-EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence 00 112345666 688899999999999999999999864
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=84.37 E-value=10 Score=39.29 Aligned_cols=53 Identities=6% Similarity=-0.053 Sum_probs=32.1
Q ss_pred CceeEEeccccCceeecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCC-CceE
Q 002343 102 DWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVK-SGRV 157 (934)
Q Consensus 102 d~~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~-tG~~ 157 (934)
.+.||..+.. |.+..+.-... .....+.++|| .+++++....++++|.. +|++
T Consensus 152 ~~~l~~~~~~-g~~~~~~~~~~--~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLSAPIRDRV--KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp SCEEEEECTT-SCEEEEECCCS--SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCE
T ss_pred CcEEEEECCC-CCEEEeecCCC--CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcC
Confidence 3466666544 55544321110 11456788898 34777777888888886 7876
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=83.92 E-value=3.3 Score=43.90 Aligned_cols=110 Identities=11% Similarity=0.180 Sum_probs=60.5
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEe-cCCCceeeccccccCCCCccccccCCCC----ceeEEeccccCceeec-cc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSF-GTGRPIYSSYQASFNSNASEFYLDVDED----WELYFHSKRFGKMKKL-SS 120 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~-~~~~~i~~~~~~~~~~~~~~~~l~~~~d----~~ly~~~~~~g~~~kl-p~ 120 (934)
...+.++.+.+|+|+.+|..+|++.-.+ ..+..+..-. .+ .+...|+-+..+ +.||..+...+.++++ .-
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~---~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 130 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIK---IH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED 130 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEE---EC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEE---EC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc
Confidence 3444445677888999988888765333 2222222210 01 112344444444 5677766555544322 10
Q ss_pred CHHHHHhcCCeeecCCceEeece-------eeEEEEEeCCCceEEEE
Q 002343 121 SAEEYIRRMPYISKDGGVTLGAM-------KTSVFLVDVKSGRVVDN 160 (934)
Q Consensus 121 ti~e~v~~sP~~s~Dg~~~~G~k-------~~t~f~vd~~tG~~~~~ 160 (934)
..+.---...++++||-+|++.. ...++.+|+++|+....
T Consensus 131 ~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 131 LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 00000012236788999999865 46899999999887654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=83.25 E-value=2.3 Score=45.20 Aligned_cols=114 Identities=4% Similarity=-0.057 Sum_probs=72.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC------CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT------GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLS 119 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~------~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp 119 (934)
.+..+++++-||+|+..|..+++....+.. +..+..-...+........++-...||.+++.+...+... .+.
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 356788888999999999999988877762 2233332111111111235666778888888776555432 222
Q ss_pred cCHHHHHhcCCeeec-CC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 120 SSAEEYIRRMPYISK-DG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 120 ~ti~e~v~~sP~~s~-Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
-.-. --.+-+.++ || .+++|+...++.+.|.++|+.+..+.
T Consensus 113 ~~~~--~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 155 (366)
T 3k26_A 113 GHGN--AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG 155 (366)
T ss_dssp SCCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCC--cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec
Confidence 1000 001223454 54 68899999999999999999999984
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=83.22 E-value=3.2 Score=43.32 Aligned_cols=108 Identities=10% Similarity=-0.029 Sum_probs=61.2
Q ss_pred CCC-eEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPD-VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~-~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
+.. ++++.+.+|+|+.+|..+|...|....+.|.... -+....+|+-+..++.|+..+...|.++.+.-.....
T Consensus 38 ~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-----~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 38 ARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHC-----LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp GGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEE-----ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceee-----ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC
Confidence 344 6677778888888888888444544333322111 1111234554555566777666566665442111110
Q ss_pred Hh---cCCeeecCCceEe-----ec-------------eeeEEEEEeCCCceEEEE
Q 002343 126 IR---RMPYISKDGGVTL-----GA-------------MKTSVFLVDVKSGRVVDN 160 (934)
Q Consensus 126 v~---~sP~~s~Dg~~~~-----G~-------------k~~t~f~vd~~tG~~~~~ 160 (934)
.. ..-++++||-+|+ |. ....++.+|+. |+....
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 00 2345788999998 65 23489999998 776544
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=83.08 E-value=4.2 Score=42.83 Aligned_cols=153 Identities=11% Similarity=0.081 Sum_probs=89.2
Q ss_pred CCCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHH
Q 002343 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAE 123 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~ 123 (934)
|.+..++.++.||+|++.|..+|+...++.. ..++... .. .. ....++-...|+.+.+.+...|... .+.-- .
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~-~~-~~--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h-~ 97 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAG-KF-IA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-P 97 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE-EE-EG--GGTEEEEEETTSEEEEEETTTCCEEEEEECC-S
T ss_pred CCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEE-EE-eC--CCCEEEEECCCCEEEEEECCCCcEEEEEeCC-C
Confidence 3577889999999999999999999888873 3344331 11 11 1234566677888877765544331 11100 0
Q ss_pred HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCc-eEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccccc
Q 002343 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSG-RVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (934)
Q Consensus 124 e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (934)
+.| .+=++++|| .+.+|+..-++.+-|.++| ...+++..... . . .| ....|.. .
T Consensus 98 ~~v-~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-~--------v--~~------v~~~p~~------~ 153 (304)
T 2ynn_A 98 DYI-RSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-F--------V--MC------VAFNPKD------P 153 (304)
T ss_dssp SCE-EEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-C--------E--EE------EEECTTC------T
T ss_pred CcE-EEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-c--------E--EE------EEECCCC------C
Confidence 000 111345566 6889999999999999999 44455532211 0 0 00 0111110 1
Q ss_pred ceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 202 QLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 202 ~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
..|.-+-.|-+|..+|..++.....+
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~ 179 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTL 179 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCcccee
Confidence 25677777888888887666554433
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=82.96 E-value=7 Score=40.89 Aligned_cols=113 Identities=13% Similarity=0.060 Sum_probs=61.4
Q ss_pred CCCeEEEEe-eCCeEEEEecCC-Cee------eeEecCCCceeeccccccCCCCccccccCCCCceeEEecc--ccCcee
Q 002343 47 EPDVALVAA-LDGTIHLVDTKL-GKI------RWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSK--RFGKMK 116 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~s-g~~------~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~--~~g~~~ 116 (934)
....++|+. -||+|+.+|..+ |++ .+....+.....- + ...+...+|+-+..|+.+++..- ..|.++
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM--V-FHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE--E-ECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE--E-ECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 455677776 899999999887 766 3444444332211 0 11112235666667777777654 234331
Q ss_pred --ecccCHHHH-----HhcCCeeecCC-ceE-eeceeeEEEEEeCC--Cc--eEEEEEe
Q 002343 117 --KLSSSAEEY-----IRRMPYISKDG-GVT-LGAMKTSVFLVDVK--SG--RVVDNYV 162 (934)
Q Consensus 117 --klp~ti~e~-----v~~sP~~s~Dg-~~~-~G~k~~t~f~vd~~--tG--~~~~~~~ 162 (934)
+.--+++.- .....++++|| .+| ++....++.+.|.. +| +.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 111111110 01136788999 455 55566777777777 44 4444444
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=82.81 E-value=5.2 Score=40.56 Aligned_cols=108 Identities=12% Similarity=-0.037 Sum_probs=60.2
Q ss_pred CCCeEEEEeeCCeEEEEecCC-CeeeeEecCC--CceeeccccccCCCCcccccc--CCCCceeEEeccccCceeecccC
Q 002343 47 EPDVALVAALDGTIHLVDTKL-GKIRWSFGTG--RPIYSSYQASFNSNASEFYLD--VDEDWELYFHSKRFGKMKKLSSS 121 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~s-g~~~W~~~~~--~~i~~~~~~~~~~~~~~~~l~--~~~d~~ly~~~~~~g~~~klp~t 121 (934)
....++ ++-||+|+.+|..+ |+..-.+... ..+... +...+.+.-++.- ......||......+..+.+...
T Consensus 52 dg~~l~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (297)
T 2ojh_A 52 DGKYLL-LNSEGLLYRLSLAGDPSPEKVDTGFATICNNDH--GISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN 128 (297)
T ss_dssp TSSEEE-EEETTEEEEEESSSCCSCEECCCTTCCCBCSCC--EECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS
T ss_pred CCCEEE-EEcCCeEEEEeCCCCCCceEeccccccccccce--EECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC
Confidence 344444 55699999999988 7766444322 122111 1111111112222 12357888876655555555433
Q ss_pred HHHHHhcCCeeecCC--ceEeeceee--EEEEEeCCCceEEEE
Q 002343 122 AEEYIRRMPYISKDG--GVTLGAMKT--SVFLVDVKSGRVVDN 160 (934)
Q Consensus 122 i~e~v~~sP~~s~Dg--~~~~G~k~~--t~f~vd~~tG~~~~~ 160 (934)
-+ ...+..|+|| +++++.... .++.+|..+|+....
T Consensus 129 ~~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 129 LP---SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp SS---EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred CC---ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 22 3557889999 444564433 678888988887543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=82.69 E-value=5.2 Score=47.70 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=91.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
....+++++.||+|+..|..+|+...++. ++++..... ......++-+..|+.+.+.+...+....+......
T Consensus 441 ~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~-----s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 515 (694)
T 3dm0_A 441 DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF-----SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG 515 (694)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-----CTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE-----eCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence 56788889999999999999999988885 333332221 11224567778888888765432222122111000
Q ss_pred HH--hcCCeeecCC---ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccc
Q 002343 125 YI--RRMPYISKDG---GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (934)
Q Consensus 125 ~v--~~sP~~s~Dg---~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (934)
-- -.+=+.++|+ .+.+|+...++.+-|..+++.+.++...... ...++ +.| .
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~---------v~~v~--------~sp----d-- 572 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY---------VSTVA--------VSP----D-- 572 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC---------EEEEE--------ECT----T--
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC---------EEEEE--------EeC----C--
Confidence 00 0112345555 6889999999999999999999887543210 00011 111 0
Q ss_pred ccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 200 IRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 200 ~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
...|..+-.|-+|..+|..+|+....+
T Consensus 573 -g~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 573 -GSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp -SSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred -CCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 125666667777888888777766543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=82.40 E-value=4.3 Score=43.86 Aligned_cols=113 Identities=10% Similarity=0.022 Sum_probs=64.1
Q ss_pred CCCCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCcc------------------c---cccCCCCc
Q 002343 45 PPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASE------------------F---YLDVDEDW 103 (934)
Q Consensus 45 ~~~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~------------------~---~l~~~~d~ 103 (934)
+|....++++.-|++|+.+|..+|+..-.+..............+.+..- . +.....++
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 44677788888889999999999986533321111100000000000000 0 12344568
Q ss_pred eeEEeccccCceeecccCHHHHHhcCCeeec-CC--ceEeece-----eeEEEEEeCCCceEEE
Q 002343 104 ELYFHSKRFGKMKKLSSSAEEYIRRMPYISK-DG--GVTLGAM-----KTSVFLVDVKSGRVVD 159 (934)
Q Consensus 104 ~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~-Dg--~~~~G~k-----~~t~f~vd~~tG~~~~ 159 (934)
.||..+...|..++|.-.- . .-..|..|+ || ++|+... ...++++|+.+|+...
T Consensus 169 ~l~~~d~~~g~~~~l~~~~-~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQEN-Q-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK 230 (388)
T ss_dssp EEEEEETTTCCEEEEEEES-S-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE
T ss_pred eEEEEECCCCceEEeecCC-c-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE
Confidence 8999887777766653221 1 125788999 98 4444432 4478899988876544
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=82.33 E-value=7.4 Score=46.44 Aligned_cols=109 Identities=12% Similarity=0.146 Sum_probs=60.5
Q ss_pred CCCCeEEEEeeCCeEEEEecCCC---eeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCH
Q 002343 46 PEPDVALVAALDGTIHLVDTKLG---KIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA 122 (934)
Q Consensus 46 ~~~~~~lvstldG~~~~v~~~sg---~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti 122 (934)
|....++++ -+|+|+.+|..+| ++.--...+..+... +...+.+.-.|. .|+.||..+...|..+++...-
T Consensus 118 pDg~~l~~~-~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~--~~SPDG~~la~~---~~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 118 PDAQRLLFP-LGGELYLYDLKQEGKAAVRQLTHGEGFATDA--KLSPKGGFVSFI---RGRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp TTSSEEEEE-ETTEEEEEESSSCSTTSCCBCCCSSSCEEEE--EECTTSSEEEEE---ETTEEEEEETTTTEEEECCCCC
T ss_pred CCCCEEEEE-eCCcEEEEECCCCCcceEEEcccCCcccccc--cCCCCCCEEEEE---eCCcEEEEecCCCCEEEeccCC
Confidence 345555544 4599999998888 544322222333322 111221111232 3567888876666665554321
Q ss_pred --------HHHH-------hcCCeeecCCc-eEeecee---------------------------------eEEEEEeCC
Q 002343 123 --------EEYI-------RRMPYISKDGG-VTLGAMK---------------------------------TSVFLVDVK 153 (934)
Q Consensus 123 --------~e~v-------~~sP~~s~Dg~-~~~G~k~---------------------------------~t~f~vd~~ 153 (934)
++.| ..++..|+||- |+.++.. .+++++|..
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 1122 26789999993 4444332 288899999
Q ss_pred C-ceEEEE
Q 002343 154 S-GRVVDN 160 (934)
Q Consensus 154 t-G~~~~~ 160 (934)
| |+....
T Consensus 272 ~~~~~~~~ 279 (741)
T 2ecf_A 272 EQAQTQWI 279 (741)
T ss_dssp TTCCCEEE
T ss_pred CCCceEEe
Confidence 9 886654
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=82.02 E-value=6.3 Score=41.82 Aligned_cols=154 Identities=12% Similarity=0.123 Sum_probs=90.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHH--
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE-- 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~-- 123 (934)
....++.++.||+|+..|..+|+..-+|.. ..++.+- . -......++-...||.+.+.+.+.+.+..+.-.-.
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~-~---~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v 151 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV-D---IDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWV 151 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE-E---ECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEE-E---EcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcE
Confidence 467888899999999999999999888763 2333321 0 11122456666777777665443222222210000
Q ss_pred HHHhcCCee--ecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccc
Q 002343 124 EYIRRMPYI--SKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (934)
Q Consensus 124 e~v~~sP~~--s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (934)
.-++.+|.. +.|+ .+++|+...++.+-|.++++.+.++...... ...+ .+.| +
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~---------v~~~--------~~sp---~---- 207 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN---------INTL--------TASP---D---- 207 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC---------EEEE--------EECT---T----
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc---------EEEE--------EEcC---C----
Confidence 001122221 1233 6888999999999999999998887532210 0001 0111 0
Q ss_pred cceEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 201 RQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 201 ~~~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
...|..+-.|-+|..+|..+++....+.
T Consensus 208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 208 GTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp SSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 1267777778888889988888776654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.01 E-value=2.1 Score=48.09 Aligned_cols=114 Identities=9% Similarity=0.015 Sum_probs=70.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeee----Eec-CCCceeeccccccCC-CCccccccCCCCceeEEeccccCceeeccc
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRW----SFG-TGRPIYSSYQASFNS-NASEFYLDVDEDWELYFHSKRFGKMKKLSS 120 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W----~~~-~~~~i~~~~~~~~~~-~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ 120 (934)
....+++++-||+++.+|..+++..- ++. ...++.+-. +..+ .....++-...|+.+++.+-..|...+.-.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVH--LIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEE--EEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEE--EcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 56788888999999999988877543 332 122232210 0111 112355666778888887655554322111
Q ss_pred CHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 121 SAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 121 ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.-..---.+.+++ || .+++|+...++.+-|.+||+.++++..
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecc
Confidence 0010001345677 66 788999999999999999999999874
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=81.85 E-value=4.1 Score=45.54 Aligned_cols=151 Identities=15% Similarity=0.148 Sum_probs=80.7
Q ss_pred eEEEEeeCCeEEEEecCC-Ceee---eEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCce---eecc-
Q 002343 50 VALVAALDGTIHLVDTKL-GKIR---WSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM---KKLS- 119 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~s-g~~~---W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~---~klp- 119 (934)
.++..+-||++..|+..+ |++. +.+- +..++.... ++.+.+..-.|..+ +|.+|..+...+.. ++..
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~-~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHP-AYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCC-EEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEES
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccc-eeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceec
Confidence 344567789999998876 7762 1111 011221100 00011111245444 68888887644433 2333
Q ss_pred cCHHHHHhc-CC------eeecC-CceEeec----------eeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccc
Q 002343 120 SSAEEYIRR-MP------YISKD-GGVTLGA----------MKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVV 181 (934)
Q Consensus 120 ~ti~e~v~~-sP------~~s~D-g~~~~G~----------k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (934)
|+..+.... .| .++.| +-+|+-. +..++.+||.+|++++++........ .|
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~-----------~l 336 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEID-----------SI 336 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEEC-----------EE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcc-----------eE
Confidence 665333211 11 11333 3667653 24789999999999999987643110 11
Q ss_pred cCCCccccccccCCccccccceEEEE-eeeEEEEEecCCCCceEEEE
Q 002343 182 PVDGYEELVESGVGNLKRIRQLVYIM-RTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~i~i~-RtdY~v~~~~~~s~~~~WN~ 227 (934)
.++|.. .+.||++ |-+=.|..+|..++++.=.+
T Consensus 337 -------avs~D~------~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 337 -------NVSQDE------KPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp -------EECSSS------SCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -------EECCCC------CeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 111111 1267774 55667888999998876444
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=81.61 E-value=1.1 Score=48.95 Aligned_cols=110 Identities=15% Similarity=0.033 Sum_probs=65.4
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC---CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT---GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAE 123 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~---~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~ 123 (934)
+.+++.+.-||+|+..|..+++..-.+.. +.++.+- ++.. +....+.-...|+.+++.+...+.. +.+...-.
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v--~~sp-~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~ 270 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV--TWHP-EKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ 270 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE--EECT-TSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccch--hhhh-cccceEEEeecccceeEEECCCCcEeEEEeccce
Confidence 35777888999999999998886654431 2222221 0111 1112344456777777766544432 12221100
Q ss_pred HHHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 124 EYIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 124 e~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
. | .+=++|+|| .|.+|+..-++.+-|.+||++++.+.
T Consensus 271 ~-v-~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~ 309 (357)
T 4g56_B 271 N-I-TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS 309 (357)
T ss_dssp C-E-EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC
T ss_pred e-E-EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC
Confidence 0 0 122456776 57889999999999999999998764
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=81.45 E-value=8.1 Score=40.76 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=65.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec----CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG----TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti 122 (934)
.+.++++++.||+|+..|..+|+....+. ...++.+-. -.++...++-...||.+++.+-..+.. ..++
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~ 199 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD----YDLLGEKIMSCGMDHSLKLWRINSKRM---MNAI 199 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE----ECTTSSEEEEEETTSCEEEEESCSHHH---HHHH
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE----ECCCCCEEEEecCCCCEEEEECCCCcc---cccc
Confidence 46788888999999999999999999983 233443321 111224566677888888876544322 1112
Q ss_pred HHHHhcCC------------------------------eeecCCceEeeceeeEEEEEeCCCceE
Q 002343 123 EEYIRRMP------------------------------YISKDGGVTLGAMKTSVFLVDVKSGRV 157 (934)
Q Consensus 123 ~e~v~~sP------------------------------~~s~Dg~~~~G~k~~t~f~vd~~tG~~ 157 (934)
..-+..+| ..+ ...+++|+...++.+.|..+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTC
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccc
Confidence 21111111 112 45788888888999999888854
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=81.35 E-value=2.2 Score=49.21 Aligned_cols=110 Identities=12% Similarity=0.087 Sum_probs=77.5
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEe-----cCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccC
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSF-----GTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSS 121 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~t 121 (934)
...+++++-||+|+.+|..+|+...++ ....++..-. .. ....++-...||.+++.+-..|... .+...
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~---~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS---WL--DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEE---ES--SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEE---Ec--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 678888999999999999999999999 4445554421 11 2356777788999998876555432 23222
Q ss_pred ---HHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 122 ---AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 122 ---i~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
+... ..+-+.+.+..+++|....++.+.|..+|+.++++..
T Consensus 294 ~~~~~~~-~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 294 KQQLGNQ-QVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp TTCGGGC-EEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECC
T ss_pred CCcccCc-eeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeC
Confidence 1111 1122334677899999999999999999999998864
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=80.67 E-value=6.1 Score=49.78 Aligned_cols=106 Identities=10% Similarity=0.029 Sum_probs=63.8
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCC--ceeeccccccCCCCccccccCCCCceeE-EeccccCceeecccCHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGR--PIYSSYQASFNSNASEFYLDVDEDWELY-FHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~--~i~~~~~~~~~~~~~~~~l~~~~d~~ly-~~~~~~g~~~klp~ti~e 124 (934)
...+++++ +|+|+.+|..+|+..- +...+ .+... ++. +...-.|.. ++..|| ..+...+..+.|. -..
T Consensus 308 G~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~--~~s-dg~~l~~~s--~~~~l~~~~d~~~~~~~~l~--~~~ 378 (1045)
T 1k32_A 308 GDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRR--GGD-TKVAFIHGT--REGDFLGIYDYRTGKAEKFE--ENL 378 (1045)
T ss_dssp GGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEE--CSS-SEEEEEEEE--TTEEEEEEEETTTCCEEECC--CCC
T ss_pred CCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEee--eEc-CCCeEEEEE--CCCceEEEEECCCCCceEec--CCc
Confidence 44444444 9999999988887553 33222 22222 122 111112332 277888 6665555555554 111
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
.--.++..|+|| .|+.++...+++++|..||+......
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 222578899999 35567777799999999999988874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 934 | ||||
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-40 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-38 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-38 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-37 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-37 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-37 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 8e-37 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-36 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 6e-36 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-35 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-35 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-35 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-35 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-35 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 6e-35 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-34 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-34 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-34 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-34 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 4e-34 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-34 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-34 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-33 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-33 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 9e-33 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-32 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-32 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-32 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-32 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-32 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-32 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-31 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-31 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-31 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-31 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-30 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-30 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 9e-30 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-29 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 8e-29 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-28 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-28 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-27 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-27 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-27 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 5e-27 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-27 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-26 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-26 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-26 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-25 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-25 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-25 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-25 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-23 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-23 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-21 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 6e-19 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-18 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-08 |
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 4e-40
Identities = 60/332 (18%), Positives = 103/332 (31%), Gaps = 66/332 (19%)
Query: 477 FNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTHHDVA----LKEIQNLIASDQH 526
F K + G+ G V+ VAVK L + + E++ + H
Sbjct: 41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 100
Query: 527 PNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
NIV G + +YL E C L + + F E E L E + +
Sbjct: 101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
L LL + G+ L +HRDL +NVL+
Sbjct: 161 LTF-----------------EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV--THGK 201
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+++ + D + +
Sbjct: 202 VVKICDFGLARDIMSDSN---------------------------------YVVRGNARL 228
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFL 763
W APE L +G T D++S G +L+ + G +PY ++++ +
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ 288
Query: 764 VEHIP-EAVDLFTRLLDPNPDLRPKAQNVLNH 794
+ E + + RP N+ +
Sbjct: 289 PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 144 bits (365), Expect = 2e-38
Identities = 59/329 (17%), Positives = 108/329 (32%), Gaps = 87/329 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYG 534
+E+ G+ G V G + A K ++ H + KEIQ + + +HP +V +
Sbjct: 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM-SVLRHPTLVNLHD 90
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
D + + + E + L + + E
Sbjct: 91 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED-------------------------- 124
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+ ++ R + GL H+HE +H DLKP+N++ + +S KL D G
Sbjct: 125 -------------EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG 171
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ L S G++ + APE
Sbjct: 172 LTAHLDPKQSVKVT------------------------------------TGTAEFAAPE 195
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP---- 768
D++S+G + + ++G P+ GE+ + VK
Sbjct: 196 VAEGKPVGYYTDMWSVGVLSYILLSG-LSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 254
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ D +LL +P+ R L HP+
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWL 283
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (355), Expect = 6e-38
Identities = 65/326 (19%), Positives = 107/326 (32%), Gaps = 86/326 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD------VALKEIQNLIASDQHPNIVR 531
+ + KG G V L +A+K L K + +E++ + + +HPNI+R
Sbjct: 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE-IQSHLRHPNILR 70
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
YG D VYL LE F+EQ
Sbjct: 71 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ------------------------ 106
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+ ++ + LS+ H +IHRD+KP+N+L+ + K++D
Sbjct: 107 ---------------RTATYITELANALSYCHSKRVIHRDIKPENLLL--GSAGELKIAD 149
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G S G+ +
Sbjct: 150 FGWSVHAPSSRRTTLC-------------------------------------GTLDYLP 172
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771
PE + +DL+SLG + + + G +++ + + F A
Sbjct: 173 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 232
Query: 772 DLFTRLLDPNPDLRPKAQNVLNHPFF 797
DL +RLL NP RP + VL HP+
Sbjct: 233 DLISRLLKHNPSQRPMLREVLEHPWI 258
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 140 bits (355), Expect = 2e-37
Identities = 72/367 (19%), Positives = 125/367 (34%), Gaps = 96/367 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV------ALKEIQNLIASDQHPNIVR 531
+EI GS G V VA+K++ + +KE++ + +HPN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQKLRHPNTIQ 79
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ G + +L +E C S +DL+ V +E
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV------------------------ 115
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
++ VT + GL++LH +IHRD+K N+L+S+ KL D
Sbjct: 116 ---------------EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGD 158
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G + + S G+ W A
Sbjct: 159 FGSASIMAPANSF---------------------------------------VGTPYWMA 179
Query: 712 PEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLVEH 766
PE +L +G+ +D++SLG K P A +I ++ H
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSALYHIAQNESPALQSGH 238
Query: 767 IP-EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKL 825
+ L P RP ++ +L H F + + + D+ R + RE D+
Sbjct: 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV-LRERPPTVIMDLIQRTKDAVRELDNLQ 297
Query: 826 LRALEGI 832
R ++ I
Sbjct: 298 YRKMKKI 304
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (352), Expect = 3e-37
Identities = 64/328 (19%), Positives = 115/328 (35%), Gaps = 89/328 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYG 534
++I +G++GTV G+ VA++++ ++ + EI ++ +++PNIV +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL-VMRENKNPNIVNYLD 84
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
D +++ +E SL D++
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVT----------------------------------- 109
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+ V R+ + L LH +IHRD+K N+L+ D S KL+D G
Sbjct: 110 ------ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFG 161
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ + S + G+ W APE
Sbjct: 162 FCAQITPEQSKRSTMV-----------------------------------GTPYWMAPE 186
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVKDRKDLFLVEHIP-E 769
+ + +D++SLG + I G + PY A +L E +
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D R LD + + R A+ +L H F
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFL 273
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (350), Expect = 5e-37
Identities = 63/333 (18%), Positives = 105/333 (31%), Gaps = 92/333 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV---ALKEIQNLIASDQHPNIVRWYG 534
E+ G+ G V + A K + + + EI L AS HPNIV+
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLLD 76
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
++ +++ +E C +++ ++ L E
Sbjct: 77 AFYYENNLWILIEFCAGGAVDAVMLELERPLTES-------------------------- 110
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
Q+ V + + L++LH+ +IHRDLK N+L + D KL+D G
Sbjct: 111 -------------QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD--GDIKLADFG 155
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+S + + G+ W APE
Sbjct: 156 VSAKNTRTIQRRDSFI-----------------------------------GTPYWMAPE 180
Query: 714 QLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVK-DRKDLFLVE 765
++ D++SLG L + P+ E I K + L
Sbjct: 181 VVMCETSKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMRVLLKIAKSEPPTLAQPS 239
Query: 766 HIP-EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D + L+ N D R +L HPF
Sbjct: 240 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 8e-37
Identities = 56/327 (17%), Positives = 111/327 (33%), Gaps = 82/327 (25%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYG 534
+ + +G+ G V L +VAVK + + I+ + H N+V++YG
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ + YL LE Y G +++
Sbjct: 71 HRREGNIQYLFLE----------YCSGGELFDRIEPD----------------------- 97
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
G P + +++G+ +LH IG+ HRD+KP+N+L+ + K+SD G+
Sbjct: 98 ------IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGL 149
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
+ + + G+ + APE
Sbjct: 150 ATVFRYNNRERL---------------------------------LNKMCGTLPYVAPEL 176
Query: 715 LLQGR-QTRAIDLFSLGCILFFCITGGKHPYGES--FERDANIVKDRKDLFLVEHI-PEA 770
L + +D++S G +L + G S + ++ + + L + I
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236
Query: 771 VDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ L ++L NP R ++ ++
Sbjct: 237 LALLHKILVENPSARITIPDIKKDRWY 263
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (342), Expect = 4e-36
Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 90/339 (26%)
Query: 473 KLVVFNKEIAKGSNGTV---VLEGNYEGRSVAVKRLVKTHHDVALK-----EIQNLIASD 524
L + +KE+ G+ GTV + ++VAVK L +D ALK E ++
Sbjct: 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQL 65
Query: 525 QHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583
+P IVR G+ + + L +E LN +
Sbjct: 66 DNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL-------------------------- 98
Query: 584 RLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDK 643
+ ++++ + G+ +L E +HRDL +NVL+
Sbjct: 99 --------------QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ- 143
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
AK+SD G+SK L+ D + T G
Sbjct: 144 -HYAKISDFGLSKALRADENYYKAQ--------------------------------THG 170
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLF 762
W APE + + + D++S G +++ + G+ PY G +++ + +
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230
Query: 763 LVEHIP-EAVDLFTRLLDPNPDLRPKAQNV---LNHPFF 797
P E DL + + RP V L + ++
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 6e-36
Identities = 64/342 (18%), Positives = 111/342 (32%), Gaps = 96/342 (28%)
Query: 472 GKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVA-----LKEIQNLIASDQ 525
G+ + F+ EI +GS TV VA L + +E + ++ Q
Sbjct: 8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE-MLKGLQ 66
Query: 526 HPNIVRWYGV----ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEV 581
HPNIVR+Y + + L E + SG+ + L
Sbjct: 67 HPNIVRFYDSWESTVKGKKCIVLVTE----------LMTSGTLKTYLK------------ 104
Query: 582 RIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG--LIHRDLKPQNVLI 639
+ L R I+ GL LH +IHRDLK N+ I
Sbjct: 105 -----------------RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 147
Query: 640 SKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699
+ + K+ D+G++ + +
Sbjct: 148 T-GPTGSVKIGDLGLATLKRASFA------------------------------------ 170
Query: 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA---NIVK 756
G+ + APE + + ++D+++ G + T ++PY E +
Sbjct: 171 -KAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIYRRVTS 227
Query: 757 DRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
K + PE ++ + N D R +++LNH FF
Sbjct: 228 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (335), Expect = 3e-35
Identities = 64/332 (19%), Positives = 111/332 (33%), Gaps = 87/332 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
I GS G +G+ + K L + + E+ L+ +HPNIVR+
Sbjct: 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVN-LLRELKHPNIVRY 68
Query: 533 YGVESDQ--DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
Y D+ +Y+ +E Y G + ++ L+E
Sbjct: 69 YDRIIDRTNTTLYIVME----------YCEGGDLASVITKGTKERQYLDE---------- 108
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG-----LIHRDLKPQNVLISKDKSF 645
+L+V + L H ++HRDLKP NV + D
Sbjct: 109 ---------------EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQ 151
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
KL D G+++ L D S G
Sbjct: 152 NVKLGDFGLARILNHDTSFAKAF-----------------------------------VG 176
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE 765
+ + +PEQ+ + D++SLGC+L+ S + A +++ K +
Sbjct: 177 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 236
Query: 766 HIP-EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E ++ TR+L+ RP + +L +P
Sbjct: 237 RYSDELNEIITRMLNLKDYHRPSVEEILENPL 268
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (335), Expect = 3e-35
Identities = 63/327 (19%), Positives = 107/327 (32%), Gaps = 81/327 (24%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYG 534
+ + G G V + VAVK L + D L E L+ QH +VR Y
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN-LMKQLQHQRLVRLYA 75
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V + + +Y+ E Y+ +GS + L
Sbjct: 76 VVTQEP-IYIITE----------YMENGSLVDFLKTP----------------------- 101
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+LL + I G++ + E IHRDL+ N+L+S K++D G+
Sbjct: 102 ----SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT--LSCKIADFGL 155
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ ++ + W APE
Sbjct: 156 ARLIEDNEYTAR----------------------------------EGAKFPIKWTAPEA 181
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP-EAVD 772
+ G T D++S G +L +T G+ PY G + ++ + ++ P E
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ 241
Query: 773 LFTRLLDPNPDLRPKAQNVLN--HPFF 797
L P+ RP + + FF
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLEDFF 268
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 133 bits (336), Expect = 4e-35
Identities = 64/327 (19%), Positives = 111/327 (33%), Gaps = 61/327 (18%)
Query: 477 FNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHP 527
+ ++I +G+ G V VAVK L + + Q L+A +P
Sbjct: 17 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
NIV+ GV + + L E Y+ G E L + + V
Sbjct: 77 NIVKLLGVCAVGKPMCLLFE----------YMAYGDLNEFLRSMSPHT-----VCSLSHS 121
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+ + A+ L + R + +G+++L E +HRDL +N L+ ++
Sbjct: 122 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV--GENMVV 179
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K++D G+S+ +
Sbjct: 180 KIADFGLSRNIYSADYYKAD---------------------------------GNDAIPI 206
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEH 766
W PE + R T D+++ G +L+ + G PY G + E V+D L E+
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 767 IP-EAVDLFTRLLDPNPDLRPKAQNVL 792
P E +L P RP ++
Sbjct: 267 CPLELYNLMRLCWSKLPADRPSFCSIH 293
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (335), Expect = 4e-35
Identities = 60/341 (17%), Positives = 108/341 (31%), Gaps = 86/341 (25%)
Query: 473 KLVVFNKEIAKGSNGTV---VLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQH 526
L++ + E+ G+ G+V V + VA+K L + +E+ ++ +
Sbjct: 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 68
Query: 527 PNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
P IVR GV + L +E L+ +
Sbjct: 69 PYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVS------------------ 109
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ ++ + G+ +L E +HRDL +NVL+
Sbjct: 110 ---------------------NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR--H 146
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
AK+SD G+SK L D S T + G
Sbjct: 147 YAKISDFGLSKALGADDSYYTARSAGK--------------------------------W 174
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLV 764
W APE + + + D++S G ++ ++ G+ PY ++ K +
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 234
Query: 765 EHIP-EAVDLFTRLLDPNPDLRPKAQNV---LNHPFFWTAD 801
P E L + + RP V + ++ A
Sbjct: 235 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 275
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 5e-35
Identities = 63/321 (19%), Positives = 112/321 (34%), Gaps = 81/321 (25%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVE 536
+ I KG G V+L G+Y G VAVK + A +++ +H N+V+ GV
Sbjct: 11 LLQTIGKGEFGDVML-GDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 69
Query: 537 SDQD-FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI 595
++ +Y+ E Y+ GS + L + + ++L
Sbjct: 70 VEEKGGLYIVTE----------YMAKGSLVDYL--RSRGRSVLGG--------------- 102
Query: 596 ELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGIS 655
LLK + D+ + +L +HRDL +NVL+S+D AK+SD G++
Sbjct: 103 ----------DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLT 150
Query: 656 KRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQL 715
K G W APE L
Sbjct: 151 KEASSTQ--------------------------------------DTGKLPVKWTAPEAL 172
Query: 716 LQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP-EAVDL 773
+ + + D++S G +L+ + G+ PY + V+ + + P ++
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV 232
Query: 774 FTRLLDPNPDLRPKAQNVLNH 794
+ +RP +
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQ 253
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 134 bits (338), Expect = 6e-35
Identities = 62/329 (18%), Positives = 105/329 (31%), Gaps = 87/329 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYG 534
+E+ G+ G V GR K + + EI ++ HP ++ +
Sbjct: 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS-IMNQLHHPKLINLHD 93
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
D+ + L LE + L D I E
Sbjct: 94 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE--------------------------- 126
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
A+++ R GL H+HE ++H D+KP+N++ K+ K+ D G
Sbjct: 127 ------------AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG 174
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
++ +L D AT + APE
Sbjct: 175 LATKLNPDEIVKVTTATAE------------------------------------FAAPE 198
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHI----P 768
+ + D++++G + + ++ G P+ GE VK F + P
Sbjct: 199 IVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP 257
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
EA D LL P R + L HP+
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALEHPWL 286
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (335), Expect = 1e-34
Identities = 51/328 (15%), Positives = 108/328 (32%), Gaps = 86/328 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVAL--KEIQNLIASDQHPNIVRWYGV 535
+++ +G G V ++ K + D L KEI L +H NI+ +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISIL-NIARHRNILHLHES 69
Query: 536 ESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ + + E + + + I + E+
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNER--------------------------- 102
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+++ + L LH + H D++P+N++ +S K+ + G
Sbjct: 103 ------------EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
+++L+ + + + + APE
Sbjct: 151 ARQLKPGDNFRLL------------------------------------FTAPEYYAPEV 174
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP----E 769
+ A D++SLG +++ ++G +P+ E+ ++ + + + F E E
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSG-INPFLAETNQQIIENIMNAEYTFDEEAFKEISIE 233
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
A+D RLL R A L HP+
Sbjct: 234 AMDFVDRLLVKERKSRMTASEALQHPWL 261
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 1e-34
Identities = 56/323 (17%), Positives = 109/323 (33%), Gaps = 81/323 (25%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYG 534
F KE+ G G V VA+K + + D ++E + ++ + H +V+ YG
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYG 66
Query: 535 VESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
V + Q +++ E L + + + F+ Q
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-------------------------- 100
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
QLL++ +D+ + +L +HRDL +N L+ + K+SD G
Sbjct: 101 -------------QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV--NDQGVVKVSDFG 145
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+S+ + D + W PE
Sbjct: 146 LSRYVLDDEYTSS----------------------------------VGSKFPVRWSPPE 171
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV- 771
L+ + + D+++ G +++ + GK PY + A + L+ E V
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231
Query: 772 DLFTRLLDPNPDLRPKAQNVLNH 794
+ D RP + +L++
Sbjct: 232 TIMYSCWHEKADERPTFKILLSN 254
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-34
Identities = 65/329 (19%), Positives = 116/329 (35%), Gaps = 69/329 (20%)
Query: 477 FNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQH 526
F K + G+ G VV + +VAVK L + H + + E++ L H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 527 PNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
NIV G + + E Y G L +++DS + ++ ++
Sbjct: 87 MNIVNLLGACTIGGPTLVITE----------YCCYGDLLNFLR-RKRDSFICSKTSPAIM 135
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
E D+E LL + + G++ L IHRDL +N+L++
Sbjct: 136 EDDELALDLE----------DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RI 183
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G+++ ++ D + + +
Sbjct: 184 TKICDFGLARDIKNDSNYVVK---------------------------------GNARLP 210
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLV 764
W APE + T D++S G L+ + G PY ++K+ +
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270
Query: 765 EHIP-EAVDLFTRLLDPNPDLRPKAQNVL 792
EH P E D+ D +P RP + ++
Sbjct: 271 EHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 3e-34
Identities = 56/322 (17%), Positives = 100/322 (31%), Gaps = 79/322 (24%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVRWYG 534
F +EI G G V L VA+K + + ++E + ++ HP +V+ YG
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYG 67
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V +Q + L E D
Sbjct: 68 VCLEQAPICLVFEFMEHGCLS--------------------------------------D 89
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+ + LL + D+ G+++L E +IHRDL +N L+ ++ K+SD G+
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQVIKVSDFGM 147
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ + D + W +PE
Sbjct: 148 TRFVLDDQYTSSTGT----------------------------------KFPVKWASPEV 173
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP-EAVD 772
R + D++S G +++ + GK PY S + L+
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 233
Query: 773 LFTRLLDPNPDLRPKAQNVLNH 794
+ P+ RP +L
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQ 255
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 130 bits (328), Expect = 4e-34
Identities = 58/327 (17%), Positives = 108/327 (33%), Gaps = 79/327 (24%)
Query: 477 FNKEIAKGSNGTVVL----EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNI 529
+ I G G V VA+K L + + ++ + ++ HPN+
Sbjct: 30 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 89
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ GV + V + E D
Sbjct: 90 IHLEGVVTKSTPVMIITEFMENGSLDSFLR------------------------------ 119
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
QL+ + R I +G+ +L ++ +HRDL +N+L+ + + K+
Sbjct: 120 --------QNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV--NSNLVCKV 169
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
SD G+S+ L+ D S T + W
Sbjct: 170 SDFGLSRFLEDDTSDPTYTSALGG------------------------------KIPIRW 199
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP 768
APE + + T A D++S G +++ ++ G+ PY + + N ++ L P
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 259
Query: 769 EAV-DLFTRLLDPNPDLRPKAQNVLNH 794
A+ L + + RPK ++N
Sbjct: 260 SALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 5e-34
Identities = 62/334 (18%), Positives = 111/334 (33%), Gaps = 74/334 (22%)
Query: 476 VFNKEIAKGSNGTVVL--------EGNYEGRSVAVKRLVKTHHDVALK----EIQNLIAS 523
V K + +G+ G VVL + VAVK L + L E++ +
Sbjct: 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 75
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVR 582
+H NI+ G + +Y+ +E + +L + + +
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL------------------------Q 111
Query: 583 IRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD 642
R P +E + + S L+ + G+ +L IHRDL +NVL+++D
Sbjct: 112 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 171
Query: 643 KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702
K++D G+++ +
Sbjct: 172 --NVMKIADFGLARDIHHIDYYKKTT---------------------------------N 196
Query: 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDL 761
G W APE L T D++S G +L+ T G PY G E ++K+ +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM 256
Query: 762 FLVEHIP-EAVDLFTRLLDPNPDLRPKAQNVLNH 794
+ E + P RP + ++
Sbjct: 257 DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 6e-34
Identities = 71/370 (19%), Positives = 120/370 (32%), Gaps = 92/370 (24%)
Query: 471 IGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
I V ++ + G NG V+ A+K L A +E++ + Q P+I
Sbjct: 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK--ARREVELHWRASQCPHI 67
Query: 530 VRWYGV----ESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIR 584
VR V + + + + +E L I +++ E
Sbjct: 68 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-------------QDRGDQAFTEREAS 114
Query: 585 LLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDK 643
++ + I + +LH I + HRD+KP+N+L SK
Sbjct: 115 -------------------------EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 149
Query: 644 SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703
+ KL+D G +K S T T
Sbjct: 150 NAILKLTDFGFAKETTSHNSLTTPCYT--------------------------------- 176
Query: 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDR----- 758
+ APE L + ++ D++SLG I++ + G Y + +K R
Sbjct: 177 ---PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 233
Query: 759 ---KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVE 815
+ E E L LL P R +NHP+ T++ + RV
Sbjct: 234 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI-MQSTKVPQTPLHTSRVL 292
Query: 816 LEDRESDSKL 825
ED+E +
Sbjct: 293 KEDKERWEDV 302
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 2e-33
Identities = 64/372 (17%), Positives = 107/372 (28%), Gaps = 127/372 (34%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYG 534
E+ G+ G V G +A K + +I ++ P IV +YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ + +E ++ GS ++ L
Sbjct: 72 AFYSDGEISICME----------HMDGGSLDQVL-------------------------- 95
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEI-GLIHRDLKPQNVLISKDKSFCAKLSDMG 653
KA P L KV+ ++ GL++L E ++HRD+KP N+L++ KL D G
Sbjct: 96 ---KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFG 150
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+S +L M+ G+ + +PE
Sbjct: 151 VSGQLIDSMA-------------------------------------NSFVGTRSYMSPE 173
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITG---------------------------------- 739
+L + D++S+G L G
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 740 ---------GKHPYGESFERDANIVKDRKDLFLVEHI-PEAVDLFTRLLDPNPDLRPKAQ 789
P FE IV + E D + L NP R +
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 293
Query: 790 NVLNHPFFWTAD 801
++ H F +D
Sbjct: 294 QLMVHAFIKRSD 305
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 2e-33
Identities = 69/361 (19%), Positives = 119/361 (32%), Gaps = 85/361 (23%)
Query: 479 KEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIV 530
K + G+ GTV EG VA+K L + A KEI + ++AS +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
R G+ ++ L D +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVR-------------------------------- 102
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
+ S LL I G+++L + L+HRDL +NVL+ K++
Sbjct: 103 -------EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV--KTPQHVKIT 153
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G++K L + G W
Sbjct: 154 DFGLAKLLGAEEKEYH---------------------------------AEGGKVPIKWM 180
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP- 768
A E +L T D++S G ++ +T G PY G ++I++ + L
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 240
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRA 828
+ + + + D RPK + ++ D + + +R+ L +DS RA
Sbjct: 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS-PTDSNFYRA 299
Query: 829 L 829
L
Sbjct: 300 L 300
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 4e-33
Identities = 61/327 (18%), Positives = 105/327 (32%), Gaps = 82/327 (25%)
Query: 477 FNKEIAKGSNGTVVL-----EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPN 528
K I G G V + VA+K L + + + ++ H N
Sbjct: 11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 70
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
I+R GV S + + E D
Sbjct: 71 IIRLEGVISKYKPMMIITEYMENGALD--------------------------------- 97
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
K QL+ + R I +G+ +L + +HRDL +N+L+ + + K
Sbjct: 98 -----KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV--NSNLVCK 150
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+SD G+S+ L+ D + G
Sbjct: 151 VSDFGLSRVLEDDPEATYT--------------------------------TSGGKIPIR 178
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA-NIVKDRKDLFLVEHI 767
W APE + + T A D++S G +++ +T G+ PY E + + D L
Sbjct: 179 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC 238
Query: 768 PEAV-DLFTRLLDPNPDLRPKAQNVLN 793
P A+ L + RPK ++++
Sbjct: 239 PSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 7e-33
Identities = 68/327 (20%), Positives = 116/327 (35%), Gaps = 70/327 (21%)
Query: 477 FNKEIAKGSNGTV---VLEGNYEGRSVAVKRL----VKTHHDVALKEIQNLIASDQHPNI 529
F I +G+ G V ++ + A+KR+ K H E++ L HPNI
Sbjct: 14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ G + ++YL++E NLL+ +R +
Sbjct: 74 INLLGACEHRGYLYLAIEYAPHG-----------------------NLLDFLRKSRVLET 110
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+ I A+ S QLL D+ G+ +L + IHRDL +N+L+ +++ AK+
Sbjct: 111 DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV--GENYVAKI 168
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
+D G+S+ + + T+G W
Sbjct: 169 ADFGLSRGQEVYVKK------------------------------------TMGRLPVRW 192
Query: 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP 768
A E L T D++S G +L+ ++ G PY G + + L +
Sbjct: 193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD 252
Query: 769 -EAVDLFTRLLDPNPDLRPKAQNVLNH 794
E DL + P RP +L
Sbjct: 253 DEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 9e-33
Identities = 52/328 (15%), Positives = 105/328 (32%), Gaps = 81/328 (24%)
Query: 477 FNKEIAKGSNGTV----VLEGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNI 529
FN+ I +G G V +L+ + + AVK L + + + ++ HPN+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 530 VRWYGVESDQDF-VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
+ G+ + + L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLR--------------------------------- 117
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
+ + + L+ + G+ L +HRDL +N ++ D+ F K
Sbjct: 118 -----NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVK 170
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
++D G+++ + N TG
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTG-------------------------------AKLPVK 199
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKDRKDLFLVEHI 767
W A E L + T D++S G +L+ +T G PY + D + + L E+
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 768 PEAV-DLFTRLLDPNPDLRPKAQNVLNH 794
P+ + ++ + P ++RP +++
Sbjct: 260 PDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 1e-32
Identities = 74/335 (22%), Positives = 122/335 (36%), Gaps = 90/335 (26%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIV 530
F K + +GS TVVL R A+K L K H + +++++ HP V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVME 590
+ Y D + +Y L Y +G + +
Sbjct: 72 KLYFTFQDDEKLYFGLS----------YAKNGELLKYI---------------------- 99
Query: 591 NTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLS 650
K T +IVS L +LH G+IHRDLKP+N+L+++D +++
Sbjct: 100 -------RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED--MHIQIT 150
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G +K L + G++ +
Sbjct: 151 DFGTAKVLSPESKQAR---------------------------------ANSFVGTAQYV 177
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHIP 768
+PE L + ++ DL++LGCI++ + G P+ E I+K D F + P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEYLIFQKIIKLEYD-FPEKFFP 235
Query: 769 EAVDLFTRLLDPNPDLRPKAQ------NVLNHPFF 797
+A DL +LL + R + + HPFF
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 1e-32
Identities = 64/338 (18%), Positives = 108/338 (31%), Gaps = 99/338 (29%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR---SVAVKRLVKTHHD-VALKEIQN---LIASDQHP 527
+ + I GS GTV Y+G+ VAVK L T L+ +N ++ +H
Sbjct: 10 ITVGQRIGSGSFGTV-----YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 528 NIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
NI+ + G + + + C SL ++++ FE
Sbjct: 65 NILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------- 104
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
+L+ + R G+ +LH +IHRDLK N+ + +D
Sbjct: 105 --------------------KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED--LT 142
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G++ F GS
Sbjct: 143 VKIGDFGLATVKSRWSGSHQ---------------------------------FEQLSGS 169
Query: 707 SGWQAPEQLL---QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDL 761
W APE + + + D+++ G +L+ +T G+ PY RD +V
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLS 228
Query: 762 FLVEHIP-----EAVDLFTRLLDPNPDLRPKAQNVLNH 794
+ + L L D RP +L
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 126 bits (317), Expect = 2e-32
Identities = 73/370 (19%), Positives = 134/370 (36%), Gaps = 89/370 (24%)
Query: 477 FNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRW 532
F + G+ V+L E + VA+K + K + ++N ++ +HPNIV
Sbjct: 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 72
Query: 533 YGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+ +YL ++ + L D I
Sbjct: 73 DDIYESGGHLYLIMQLVSGGELFDRIV--------------------------------- 99
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFCAKLS 650
+ + ++ ++ + +LH++G++HRDLKP+N+L S D+ +S
Sbjct: 100 -------EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 152
Query: 651 DMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
D G+SK T G+ G+
Sbjct: 153 DFGLSKMEDPGSVLSTA------------------------------------CGTPGYV 176
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLF--LVEH 766
APE L Q ++A+D +S+G I + + G P+ + + I+K + +
Sbjct: 177 APEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSPYWDD 235
Query: 767 IP-EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKL 825
I A D L++ +P+ R + L HP+ DT L S +++ + SK
Sbjct: 236 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKW 294
Query: 826 LRALEGIALV 835
+A A+V
Sbjct: 295 KQAFNATAVV 304
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 2e-32
Identities = 62/331 (18%), Positives = 111/331 (33%), Gaps = 86/331 (25%)
Query: 476 VFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPN 528
+ +K + KGS G V L E + A+K L K + + E + L + +HP
Sbjct: 5 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 64
Query: 529 IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+ + ++ ++ +E L I Q + + R
Sbjct: 65 LTHMFCTFQTKENLFFVMEYLNGGDLMYHI---------------QSCHKFDLSRAT--- 106
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+I+ GL LH G+++RDLK N+L+ KD
Sbjct: 107 ----------------------FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD--GHI 142
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K++D G+ K + G+
Sbjct: 143 KIADFGMCKENMLGDAKTNTFC-----------------------------------GTP 167
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHI 767
+ APE LL + ++D +S G +L+ + G +G+ E + ++ +
Sbjct: 168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE 227
Query: 768 PEAVDLFTRLLDPNPDLRPKAQN-VLNHPFF 797
EA DL +L P+ R + + HP F
Sbjct: 228 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 2e-32
Identities = 59/327 (18%), Positives = 111/327 (33%), Gaps = 81/327 (24%)
Query: 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV--ALKEIQNLIASDQHPNIVRWYG 534
++ +G G V + VA+K L L+E Q ++ +H +V+ Y
Sbjct: 21 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYA 79
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
V S++ +Y+ E +
Sbjct: 80 VVSEEP-IYIVTEYMSKGSLLDFL------------------------------------ 102
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+ QL+ + I SG++++ + +HRDL+ N+L+ ++ K++D G+
Sbjct: 103 -KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCKVADFGL 159
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ ++ + Q A W APE
Sbjct: 160 ARLIEDNEYTARQGA----------------------------------KFPIKWTAPEA 185
Query: 715 LLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIPEAV-D 772
L GR T D++S G +L T G+ PY G + V+ + PE++ D
Sbjct: 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 245
Query: 773 LFTRLLDPNPDLRPKAQNVLN--HPFF 797
L + P+ RP + + +F
Sbjct: 246 LMCQCWRKEPEERPTFEYLQAFLEDYF 272
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 123 bits (310), Expect = 7e-32
Identities = 61/336 (18%), Positives = 102/336 (30%), Gaps = 88/336 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV------------ALKEIQNLIASDQ 525
+ + +G + V + AVK + T LKE+ L
Sbjct: 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 68
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
HPNI++ F +L + + G + L K L+E R
Sbjct: 69 HPNIIQLKDTYETNTFFFLVFD----------LMKKGELFDYLTEKVT----LSEKETR- 113
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
K+ R ++ + LH++ ++HRDLKP+N+L+ D +
Sbjct: 114 ------------------------KIMRALLEVICALHKLNIVHRDLKPENILLDDDMN- 148
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
KL+D G S +L T L
Sbjct: 149 -IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI--------------------------- 180
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE 765
+ + +D++S G I++ + G + ++ F
Sbjct: 181 ---IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 237
Query: 766 HI----PEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
DL +R L P R A+ L HPFF
Sbjct: 238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 124 bits (311), Expect = 3e-31
Identities = 70/350 (20%), Positives = 115/350 (32%), Gaps = 96/350 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQ--NLIASDQHPNI 529
+ I +G G V G+ A+K L K +AL E +L+++ P I
Sbjct: 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 69
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
V D + L+ + G L+
Sbjct: 70 VCMSYAFHTPDKLSFILD----------LMNGGDLHYHLSQHGV---------------- 103
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
A + +I+ GL H+H +++RDLKP N+L+ D+ ++
Sbjct: 104 -------------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL--DEHGHVRI 148
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
SD+G++ + G+ G+
Sbjct: 149 SDLGLACDFSKKKPHAS-------------------------------------VGTHGY 171
Query: 710 QAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVK--DRKDLFLVEH 766
APE L +G + D FSLGC+LF + G + I + + L +
Sbjct: 172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231
Query: 767 I-PEAVDLFTRLLDPNPDLRPK-----AQNVLNHPFFWTADTRLSFLRDV 810
PE L LL + + R AQ V PFF + D ++ FL+
Sbjct: 232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKY 281
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 4e-31
Identities = 57/328 (17%), Positives = 106/328 (32%), Gaps = 86/328 (26%)
Query: 477 FNKEIAKGSNGTVVL----EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNI 529
+ I +G G V +VA+K D ++ + HP+I
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 530 VRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
V+ GV ++ + V++ +E CT L + V S +
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL---------------------- 107
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
A L+ + + L++L +HRD+ +NVL+ + C K
Sbjct: 108 -----------------ASLILYAYQLSTALAYLESKRFVHRDIAARNVLV--SSNDCVK 148
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
L D G+S+ ++ + G
Sbjct: 149 LGDFGLSRYMEDSTYYKA----------------------------------SKGKLPIK 174
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHI 767
W APE + R T A D++ G ++ + G P+ G +++ + L + +
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234
Query: 768 P-EAVDLFTRLLDPNPDLRPKAQNVLNH 794
P L T+ +P RP+ +
Sbjct: 235 PPTLYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 7e-31
Identities = 59/340 (17%), Positives = 112/340 (32%), Gaps = 83/340 (24%)
Query: 476 VFNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQH 526
++E+ +GS G V + VA+K + + E N ++
Sbjct: 23 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC 82
Query: 527 PNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
++VR GV S + +E T L + L +
Sbjct: 83 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL---------- 132
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
++++++ +I G+++L+ +HRDL +N ++++D F
Sbjct: 133 --------------------SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--F 170
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+++ + G
Sbjct: 171 TVKIGDFGMTRDIYETDYYRKG---------------------------------GKGLL 197
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLV 764
W +PE L G T D++S G +L+ T + PY G S E+ V + L
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257
Query: 765 EHIP-EAVDLFTRLLDPNPDLRPKAQNVLN------HPFF 797
++ P +L NP +RP +++ P F
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 7e-31
Identities = 58/332 (17%), Positives = 106/332 (31%), Gaps = 72/332 (21%)
Query: 477 FNKEIAKGSNGTVVL------EGNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQH 526
K + +G+ G V+ + R+VAVK L + H + E++ LI H
Sbjct: 17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 76
Query: 527 PNIVRWYGV-ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585
N+V G + + +E C + NL +R +
Sbjct: 77 LNVVNLLGACTKPGGPLMVIVEFC-----------------------KFGNLSTYLRSKR 113
Query: 586 LPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSF 645
+ E + L+ + + G+ L IHRDL +N+L+S+
Sbjct: 114 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--N 171
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
K+ D G+++ + D + +
Sbjct: 172 VVKICDFGLARDIYKDPDYVRK---------------------------------GDARL 198
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFL 763
W APE + T D++S G +L+ + G PY + +K+ +
Sbjct: 199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 258
Query: 764 VEHI-PEAVDLFTRLLDPNPDLRPKAQNVLNH 794
++ PE P RP ++ H
Sbjct: 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 7e-31
Identities = 61/332 (18%), Positives = 103/332 (31%), Gaps = 96/332 (28%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVK---------THHDVALKEIQNLIA-SDQHP 527
+ G G+V + VA+K + K + E+ L S
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
++R D L LER + ++ + L E R
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFI-------------TERGALQEELAR--- 113
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
++ + H H G++HRD+K +N+LI ++
Sbjct: 114 ----------------------SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-GEL 150
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
KL D G L+ + +T G+
Sbjct: 151 KLIDFGSGALLKDTV-------------------------------------YTDFDGTR 173
Query: 708 GWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH 766
+ PE + R R+ ++SLG +L+ + G P FE D I+ R +F +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIP----FEHDEEII--RGQVFFRQR 226
Query: 767 IP-EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ E L L P RP + + NHP+
Sbjct: 227 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 119 bits (298), Expect = 3e-30
Identities = 67/350 (19%), Positives = 112/350 (32%), Gaps = 89/350 (25%)
Query: 475 VVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVA--LKEIQNLIASDQHPNIVR 531
+ ++ G G V +VAVK L + +V LKE ++ +HPN+V+
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQ 77
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
GV + + Y+ E T E
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------------------------- 112
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
+ LL + I S + +L + IHRDL +N L+ ++ K++D
Sbjct: 113 ------------SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHLVKVAD 158
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+S+ + GD A W A
Sbjct: 159 FGLSRLMTGDTYTAHAGAKFP----------------------------------IKWTA 184
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHIP-E 769
PE L + + D+++ G +L+ T G PY G + +++ + E P +
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 244
Query: 770 AVDLFTRLLDPNPDLRPKAQNVLN--HPFFWTADTRLSFLRDVSDRVELE 817
+L NP RP + F + +SD VE E
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES--------SISDEVEKE 286
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 119 bits (299), Expect = 4e-30
Identities = 59/331 (17%), Positives = 112/331 (33%), Gaps = 92/331 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVR 531
+ + GS G V L + GR A+K L K + E +++ HP I+R
Sbjct: 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-MLSIVTHPFIIR 68
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
+G D +++ ++ +
Sbjct: 69 MWGTFQDAQQIFMIMDYIEGGELFSLL--------------------------------- 95
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
K+ P+ ++ L +LH +I+RDLKP+N+L+ DK+ K++D
Sbjct: 96 ------RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL--DKNGHIKITD 147
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G +K + L G+ + A
Sbjct: 148 FGFAKYVPDVTYTLC--------------------------------------GTPDYIA 169
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771
PE + ++ID +S G +++ + G Y + + + + + F +
Sbjct: 170 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVK 229
Query: 772 DLFTRLLDPNPDLRPK-----AQNVLNHPFF 797
DL +RL+ + R ++V NHP+F
Sbjct: 230 DLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 9e-30
Identities = 60/341 (17%), Positives = 108/341 (31%), Gaps = 92/341 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVA---------LKEIQNLIASDQHPN 528
+E+ G V G A K + K + +E+ L QHPN
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL-KEIQHPN 74
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++ + V ++ V L LE S E+
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--------------------- 113
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD--KSFC 646
+ + + I++G+ +LH + + H DLKP+N+++
Sbjct: 114 ------------------EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 155
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
K+ D G++ ++ F +G+
Sbjct: 156 IKIIDFGLAHKIDFGNE------------------------------------FKNIFGT 179
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH 766
+ APE + D++S+G I + ++G G++ + V F E+
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 767 IP----EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTR 803
A D RLL +P R Q+ L HP+ DT+
Sbjct: 240 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 280
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 4e-29
Identities = 58/329 (17%), Positives = 97/329 (29%), Gaps = 87/329 (26%)
Query: 479 KEIAKGSNGTVVL----EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPN 528
+++ GS G V + + SVAVK L D ++E+ + S H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN-AMHSLDHRN 72
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
++R YGV ++ SL D + G F
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL---------------------- 110
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAK 648
L + + G+ +L IHRDL +N+L+ K
Sbjct: 111 -----------------GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL--ATRDLVK 151
Query: 649 LSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708
+ D G+ + L +
Sbjct: 152 IGDFGLMRALPQNDDHYVMQ--------------------------------EHRKVPFA 179
Query: 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKDRKDLFLVEH 766
W APE L + A D + G L+ T G+ P+ I K+ + L E
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 767 IP-EAVDLFTRLLDPNPDLRPKAQNVLNH 794
P + ++ + P+ RP + +
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 8e-29
Identities = 64/331 (19%), Positives = 107/331 (32%), Gaps = 89/331 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVR 531
K + KG+ G V+L GR A+K L K + E + L + +HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLTA 69
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
D + +E
Sbjct: 70 LKYAFQTHDRLCFVMEYANG---------------------------------------G 90
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
L + + +IVS L +LH +++RD+K +N+++ DK K++D
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGHIKITD 148
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G+ K D + + G+ + A
Sbjct: 149 FGLCKEGISDGATMKTFC-----------------------------------GTPEYLA 173
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771
PE L RA+D + LG +++ + G Y + ER ++ + F PEA
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAK 233
Query: 772 DLFTRLLDPNPDLRPK-----AQNVLNHPFF 797
L LL +P R A+ V+ H FF
Sbjct: 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 114 bits (287), Expect = 1e-28
Identities = 57/342 (16%), Positives = 97/342 (28%), Gaps = 81/342 (23%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRL-VKTHHDVALKEIQNLIASDQHP 527
R+G ++I GS G + L G VA+K VKT H E +
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV 63
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
I ++ D+ + +E SL DL S F +
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLK-------------------- 103
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLI-SKDKSFC 646
+L + ++S + ++H IHRD+KP N L+ K
Sbjct: 104 -------------------TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL 144
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
+ D G++K+ + + G+
Sbjct: 145 VYIIDFGLAKKYRDARTHQHIPYREN----------------------------KNLTGT 176
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEH 766
+ + + L Q+R DL SLG +L + G G + + +
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236
Query: 767 I--------PEAVDLFTRLLDPNPDLRPKAQ---NVLNHPFF 797
I E D +P + + F
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 7e-28
Identities = 71/367 (19%), Positives = 121/367 (32%), Gaps = 114/367 (31%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
++I +G+ G V G VA+K++ A++EI L+ HPNIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS-LLKELNHPNIVKL 66
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V ++ +YL E L +
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFM----------------------------------- 91
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ G P + ++ GL+ H ++HRDLKPQN+LI+ + KL+D
Sbjct: 92 ---DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE--GAIKLADF 146
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+++ + T + ++AP
Sbjct: 147 GLARAFGVPVRTYTHEV-----------------------------------VTLWYRAP 171
Query: 713 EQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHI-- 767
E LL + + A+D++SLGCI +T + + E D I + V
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 768 --------------------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 801
+ L +++L +P+ R A+ L HPFF
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
Query: 802 TRLSFLR 808
+ LR
Sbjct: 291 KPVPHLR 297
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 111 bits (277), Expect = 2e-27
Identities = 47/336 (13%), Positives = 95/336 (28%), Gaps = 80/336 (23%)
Query: 471 IGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALK-EIQNLIASDQHPN 528
+G + I +GS G + + VA+K + L+ E +
Sbjct: 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 62
Query: 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV 588
I Y + L ++ SL DL+ + F +
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVK--------------------- 101
Query: 589 MENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKD---KSF 645
+ + +++ + +HE L++RD+KP N LI + +
Sbjct: 102 ------------------TVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 143
Query: 646 CAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705
+ D G+ K + + T + ++ G
Sbjct: 144 MIYVVDFGMVKFYRDPV-------TKQHIPYREKKNLS---------------------G 175
Query: 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLF--- 762
++ + + L Q+R DL +LG + + + G G + + +
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 763 ----LVEHIPEAV-DLFTRLLDPNPDLRPKAQNVLN 793
L PE + D P +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 3e-27
Identities = 61/359 (16%), Positives = 104/359 (28%), Gaps = 115/359 (32%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNI 529
+ +G TV + VA+K++ H + AL+EI+ L+ HPNI
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK-LLQELSHPNI 62
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ + + L + L +I S
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS---------------------- 100
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKL 649
+ + GL +LH+ ++HRDLKP N+L+ ++ KL
Sbjct: 101 -----------------HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN--GVLKL 141
Query: 650 SDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709
+D G++K T + +
Sbjct: 142 ADFGLAKSFGSPNRAYTHQV-----------------------------------VTRWY 166
Query: 710 QAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIP 768
+APE L R +D++++GCIL + G+S + + E P
Sbjct: 167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 226
Query: 769 ----------------------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ +DL L NP R A L +F
Sbjct: 227 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 4e-27
Identities = 58/356 (16%), Positives = 117/356 (32%), Gaps = 108/356 (30%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQN---LIASDQHPNIVRWYG 534
I +G+ G V N VA+K++ H + ++ +H NI+
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKD 594
+ + +Y+++ +
Sbjct: 74 IIRAPTIEQM----------KDVYLVTH--------------------------LMGADL 97
Query: 595 IELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+L K + + I+ GL ++H ++HRDLKP N+L++ K+ D G+
Sbjct: 98 YKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGL 155
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQ 714
++ D + + ++APE
Sbjct: 156 ARVADPDHDHTGFLTEYV--------------------------------ATRWYRAPEI 183
Query: 715 LLQGRQ-TRAIDLFSLGCILFFCITGGKHPY----------------GESFERDANIVKD 757
+L + T++ID++S+GCIL ++ + + G + D N + +
Sbjct: 184 MLNSKGYTKSIDIWSVGCILAEMLS-NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242
Query: 758 RKDLFLVEHIP----------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
K + +P +A+DL ++L NP R + + L HP+
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 298
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 5e-27
Identities = 70/363 (19%), Positives = 122/363 (33%), Gaps = 115/363 (31%)
Query: 479 KEIAKGSNGTVVL--EGNYEGRSVAVKRLVKTHHD-----VALKEIQNL--IASDQHPNI 529
EI +G+ G V + GR VA+KR+ + ++E+ L + + +HPN+
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72
Query: 530 VRWYGVESDQDF---VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL 586
VR + V + L+L + Y
Sbjct: 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY---------------------------- 104
Query: 587 PVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFC 646
++ G P+ + + ++ GL LH ++HRDLKPQN+L++
Sbjct: 105 --------LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI- 155
Query: 647 AKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706
KL+D G+++ M+ + +
Sbjct: 156 -KLADFGLARIYSFQMALTSV------------------------------------VVT 178
Query: 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY---------------------- 744
++APE LLQ +DL+S+GCI K +
Sbjct: 179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 745 ----GESFERDANIVKDRKDL--FLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
+ R A K + + F+ + DL + L NP R A + L+HP+F
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
Query: 799 TAD 801
+
Sbjct: 298 DLE 300
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 5e-27
Identities = 64/360 (17%), Positives = 119/360 (33%), Gaps = 104/360 (28%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+I +G+ G V G+ VA+K+++ + AL+EI+ L +H N+V
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNL 74
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ + Y + + D +
Sbjct: 75 IEICRTKASPYNRCKGSIYLVFDF-------------------------------CEHDL 103
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ +++ +V + +++GL ++H ++HRD+K NVLI++D KL+D
Sbjct: 104 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADF 161
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+++ + T + ++ P
Sbjct: 162 GLARAFSLAKNSQPNRYTNR-------------------------------VVTLWYRPP 190
Query: 713 EQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKD-------------- 757
E LL R IDL+ GCI+ T G + + ++
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 758 ------------------RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799
+ L P A+DL +LL +P R + + LNH FFW+
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 2e-26
Identities = 57/359 (15%), Positives = 104/359 (28%), Gaps = 107/359 (29%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ-NLIASDQHPNI 529
I + +V + I KG G V G + G VAVK +E + +H NI
Sbjct: 1 IARTIVLQESIGKGRFGEVWR-GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM 589
+ + ++ + + L + Y GS + LN
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSD------YHEHGSLFDYLNRY------------------ 95
Query: 590 ENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI--------GLIHRDLKPQNVLISK 641
++K+ SGL+HLH + HRDLK +N+L+
Sbjct: 96 ------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-- 141
Query: 642 DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701
K+ ++D+G++ R +
Sbjct: 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHR----------------------------- 172
Query: 702 VGYGSSGWQAPEQLL------QGRQTRAIDLFSLGCILFFCITG---------GKHPYGE 746
G+ + APE L + D++++G + + + PY +
Sbjct: 173 --VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 747 SFERDANIVKDRK-------------DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVL 792
D ++ + RK E + + N R A +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 106 bits (266), Expect = 4e-26
Identities = 61/334 (18%), Positives = 107/334 (32%), Gaps = 91/334 (27%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVR 531
+ + G V L R VAVK L + +E QN A+ HP IV
Sbjct: 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-AALNHPAIVA 71
Query: 532 WYGVESDQD----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
Y + Y+ +E I G +
Sbjct: 72 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-------------------- 111
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
+ ++V D L+ H+ G+IHRD+KP N++I +
Sbjct: 112 -------------------RAIEVIADACQALNFSHQNGIIHRDVKPANIMI--SATNAV 150
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
K+ D GI++ + + +TQ A + G++
Sbjct: 151 KVMDFGIARAIADSGNSVTQTAAVI--------------------------------GTA 178
Query: 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA--NIVKD--RKDLFL 763
+ +PEQ D++SLGC+L+ +T G+ P+ V++
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVREDPIPPSAR 237
Query: 764 VEHIP-EAVDLFTRLLDPNPDLRPKAQNVLNHPF 796
E + + + + L NP+ R + +
Sbjct: 238 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 271
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 4e-26
Identities = 76/385 (19%), Positives = 123/385 (31%), Gaps = 113/385 (29%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGV-- 535
K I GS G V + G VA+K++++ +E+Q ++ H NIVR
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ-IMRKLDHCNIVRLRYFFY 83
Query: 536 --ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
+D VYL+L S +Q L + ++
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVK--------- 125
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+ L+++H G+ HRD+KPQN+L+ D + KL D G
Sbjct: 126 ----------------LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-KLCDFG 168
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+K+L ++ S ++APE
Sbjct: 169 SAKQLVRGEPNVSY------------------------------------ICSRYYRAPE 192
Query: 714 QLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVK-------------- 756
+ T +ID++S GC+L + G+ + D I+K
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 757 --------------DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF---WT 799
+F PEA+ L +RLL+ P R H FF
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311
Query: 800 ADTRLSFLRDVSDRVELEDRESDSK 824
+ +L RD +E S
Sbjct: 312 PNVKLPNGRDTPALFNFTTQELSSN 336
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 105 bits (263), Expect = 1e-25
Identities = 60/354 (16%), Positives = 115/354 (32%), Gaps = 112/354 (31%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWY 533
++I +G+ G V N G + A+K++ D ++EI ++ +H NIV+ Y
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREIS-ILKELKHSNIVKLY 66
Query: 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTK 593
V + + L E L L+ V G E
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-------------------------- 100
Query: 594 DIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMG 653
+++G+++ H+ ++HRDLKPQN+LI+++ K++D G
Sbjct: 101 -------------TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE--LKIADFG 145
Query: 654 ISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPE 713
+++ + +
Sbjct: 146 LARAFGIPVRK----------------------------------YTHEIVTLWYRAPDV 171
Query: 714 QLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVK--------------- 756
+ + + ID++S+GCI + G + E D I +
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 757 -------------DRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ FL +DL +++L +P+ R A+ L H +F
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 3e-25
Identities = 66/355 (18%), Positives = 105/355 (29%), Gaps = 112/355 (31%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
++I +G+ GTV + VA+KR+ D AL+EI L +H NIVR
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL-KELKHKNIVRL 66
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
+ V + L E C L +G + +
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE------------------------- 101
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ ++ GL H ++HRDLKPQN+LI+++ KL++
Sbjct: 102 --------------IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL--KLANF 145
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+++ + C +
Sbjct: 146 GLARAFGIPVRCYSA----------------------------------EVVTLWYRPPD 171
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPY----------------GESFERDANIVK 756
+ +ID++S GCI G+ + G E +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 757 DRKDLFLVEHIP--------------EAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
D P DL LL NP R A+ L HP+F
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 105 bits (262), Expect = 4e-25
Identities = 62/363 (17%), Positives = 107/363 (29%), Gaps = 117/363 (32%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVES 537
+++ +G V V VK L +EI+ L PNI+ +
Sbjct: 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK 100
Query: 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIEL 597
D +L + D + L + IR
Sbjct: 101 DPVSRTPALVFEHVNNTDFKQLYQT---------------LTDYDIR------------- 132
Query: 598 WKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKR 657
+I+ L + H +G++HRD+KP NV+I + +L D G+++
Sbjct: 133 ------------FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL-RLIDWGLAEF 179
Query: 658 LQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAPEQLLQ 717
V S ++ PE L+
Sbjct: 180 YHPGQEY------------------------------------NVRVASRYFKGPELLVD 203
Query: 718 GRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDLFLVEHI------- 767
+ ++D++SLGC+L I + + D I K L ++I
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263
Query: 768 -----------------------------PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798
PEA+D +LL + R A+ + HP+F+
Sbjct: 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
Query: 799 TAD 801
T
Sbjct: 324 TVV 326
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 7e-25
Identities = 67/342 (19%), Positives = 113/342 (33%), Gaps = 99/342 (28%)
Query: 479 KEIAKGSNGTVVL----EGNYEGRSVAVKRLVKTH-------HDVALKEIQNLIASDQHP 527
K + G+ G V L G+ G+ A+K L K + E Q L Q P
Sbjct: 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89
Query: 528 NIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP 587
+V + + ++L L+
Sbjct: 90 FLVTLHYAFQTETKLHLILDYI-------------------------------------- 111
Query: 588 VMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCA 647
L + ++ +IV L HLH++G+I+RD+K +N+L+ +
Sbjct: 112 -NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN--GHV 168
Query: 648 KLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707
L+D G+SK D + + G
Sbjct: 169 VLTDFGLSKEFVADETERAYDFCGT----------------------------------I 194
Query: 708 GWQAPEQLLQGRQ--TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVE 765
+ AP+ + G +A+D +SLG +++ +T G P+ E+++ R+ L
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEISRRILKSEP 253
Query: 766 HIP-----EAVDLFTRLLDPNPDLRPK-----AQNVLNHPFF 797
P A DL RLL +P R A + H FF
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 101 bits (252), Expect = 1e-23
Identities = 63/344 (18%), Positives = 110/344 (31%), Gaps = 92/344 (26%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVR 531
K + GS G V+L + G A+K L K + L E + ++ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-ILQAVNFPFLVK 105
Query: 532 WYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMEN 591
D +Y+ +E
Sbjct: 106 LEFSFKDNSNLYMVMEYVAG---------------------------------------G 126
Query: 592 TKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSD 651
L + IV +LH + LI+RDLKP+N+LI + ++D
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ--VTD 184
Query: 652 MGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQA 711
G +KR++G L G+ A
Sbjct: 185 FGFAKRVKGRTWTL--------------------------------------CGTPEALA 206
Query: 712 PEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAV 771
PE +L +A+D ++LG +++ G + + + + K F +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 772 DLFTRLLDPNP-----DLRPKAQNVLNHPFFWTADTRLSFLRDV 810
DL LL + +L+ ++ NH +F T D + R V
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 2e-23
Identities = 66/358 (18%), Positives = 122/358 (34%), Gaps = 116/358 (32%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ + G+ G V G VA+K+L + A +E++ L+ +H N++
Sbjct: 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMRHENVIGL 82
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + + + + L+ G+ +
Sbjct: 83 LDVFTPDETLDDFTDFY------LVMPFMGTDLGK------------------------- 111
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
L K ++ + ++ GL ++H G+IHRDLKP N+ +++D K+ D
Sbjct: 112 ----LMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDF 165
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G++++ +M T + ++AP
Sbjct: 166 GLARQADSEM--------------------------------------TGYVVTRWYRAP 187
Query: 713 EQLL-QGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDA------------------- 752
E +L R T+ +D++S+GCI+ IT GK + S D
Sbjct: 188 EVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 246
Query: 753 -------------NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
+ K L P AV+L ++L + + R A L HP+F
Sbjct: 247 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.3 bits (236), Expect = 1e-21
Identities = 52/325 (16%), Positives = 111/325 (34%), Gaps = 50/325 (15%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHDV-----ALKEIQNLIASDQHPNIVRW 532
+ G+ G+V G VAVK+L + + +E++ L+ +H N++
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGL 82
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + + + L+ +
Sbjct: 83 LDVFTPARSLE-----------------------------------EFNDVYLVTHLMGA 107
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
+ K + + I+ GL ++H +IHRDLKP N+ + ++ K+ D
Sbjct: 108 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV--NEDCELKILDF 165
Query: 653 GISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQAP 712
G+++ +M+ +++ + V ++ G + + G + +
Sbjct: 166 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD---IWSVGCIMAELLTGRTLFPGT 222
Query: 713 EQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVD 772
+ + Q + + +L + Y +S + + K + P AVD
Sbjct: 223 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ---MPKMNFANVFIGANPLAVD 279
Query: 773 LFTRLLDPNPDLRPKAQNVLNHPFF 797
L ++L + D R A L H +F
Sbjct: 280 LLEKMLVLDSDKRITAAQALAHAYF 304
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.3 bits (215), Expect = 6e-19
Identities = 57/363 (15%), Positives = 120/363 (33%), Gaps = 49/363 (13%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRW 532
K I G+ G V R+VA+K+L + + A +E+ L+ H NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 81
Query: 533 YGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENT 592
V + Q + + + ++ + + +
Sbjct: 82 LNVFTPQKTLEEFQDVYLV-----MELMDANLCQVIQ----------------------- 113
Query: 593 KDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDM 652
++ + ++ G+ HLH G+IHRDLKP N+++ D + +
Sbjct: 114 --------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
Query: 653 GISKRLQGDMS--CLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710
+ M+ +T+ ++ L + + C+ V + G
Sbjct: 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPY-GESFERDANIVKDRKDLFLVEHI-P 768
++++ T + + Y G +F + D +
Sbjct: 226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 285
Query: 769 EAVDLFTRLLDPNPDLRPKAQNVLNHPFF--WTADTRLSFLRDVSDRVELEDRESDSKLL 826
+A DL +++L +P R + L HP+ W + +L++RE +
Sbjct: 286 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW 345
Query: 827 RAL 829
+ L
Sbjct: 346 KEL 348
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 85.1 bits (209), Expect = 3e-18
Identities = 58/338 (17%), Positives = 119/338 (35%), Gaps = 44/338 (13%)
Query: 479 KEIAKGSNGTVVL-EGNYEGRSVAVKRL--VKTHHDVALKEIQNLIASDQHPNIVRWYGV 535
+++ G TV L + VA+K + K + + A EI+ L+ + + +
Sbjct: 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTKEDSM 77
Query: 536 ESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI 595
++ L + N ++ V + + I
Sbjct: 78 GANHILKLLDHFN-----------------------HKGPNGVHVVMVFEVLGENLLALI 114
Query: 596 ELWKANGHPSAQLLKVTRDIVSGLSHLH-EIGLIHRDLKPQNVLISKDKSFCAKLSDMGI 654
+ ++ G P + ++++ ++ GL ++H G+IH D+KP+NVL+ L + I
Sbjct: 115 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV-DSPENLIQIKI 173
Query: 655 SKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC-VFQFGVLFFTVGYGSSGWQAPE 713
+ + + +L C ++ L F + G ++ E
Sbjct: 174 ADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 233
Query: 714 Q--LLQGRQTRAIDLFSLGCILFFCITGGKH--PYGESFERDANIVKDR----------K 759
+ A + LG + + + GK+ + S NI K + K
Sbjct: 234 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK 293
Query: 760 DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFF 797
F + E D + +L +P R A ++NHP+
Sbjct: 294 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 331
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 53.6 bits (128), Expect = 1e-08
Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 33/185 (17%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD 538
K + +G V + + VK V+ D
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKV---------------GHTSFKKVKEKRDYGD 50
Query: 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELW 598
F L++ L + + + + N + +ME EL+
Sbjct: 51 LHFSVLAIRSARNEFRALQKLQGLAVPKVY---AWEGNAV---------LMELIDAKELY 98
Query: 599 KANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRL 658
+ ++L I+ ++ + G++H DL NVL+S+ + D S +
Sbjct: 99 RVRVENPDEVL---DMILEEVAKFYHRGIVHGDLSQYNVLVSE---EGIWIIDFPQSVEV 152
Query: 659 QGDMS 663
+
Sbjct: 153 GEEGW 157
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 934 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.86 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.49 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.44 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.23 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.2 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.18 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.65 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.53 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 96.47 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 96.17 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.15 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.03 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.94 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.22 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 95.17 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 94.13 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 93.08 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 92.9 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 92.71 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 92.67 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 92.24 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 91.18 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 91.04 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 90.85 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 90.66 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 90.64 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 90.41 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 89.85 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 89.06 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 86.95 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 86.54 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 86.53 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 85.84 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 85.83 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 85.17 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 84.29 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 83.63 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 83.39 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 83.1 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 82.97 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 82.97 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 82.43 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 82.41 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 82.14 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 81.89 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 80.77 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 80.7 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-51 Score=443.07 Aligned_cols=246 Identities=27% Similarity=0.418 Sum_probs=201.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+++.+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE-IQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHH-HHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 3588899999999999999865 568999999986432 234456665 88999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||++ |+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 85 mEy~~~----------g~L~~~l~~-----------------------------~~~l~e~~~~~i~~qi~~al~~lH~~ 125 (263)
T d2j4za1 85 LEYAPL----------GTVYRELQK-----------------------------LSKFDEQRTATYITELANALSYCHSK 125 (263)
T ss_dssp EECCTT----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCC----------CcHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 997763 344443321 34578899999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+....... ...+|
T Consensus 126 ~ivHrDiKp~Nill~~~~~--~kl~DFG~a~~~~~~~~-------------------------------------~~~~G 166 (263)
T d2j4za1 126 RVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSSRR-------------------------------------TTLCG 166 (263)
T ss_dssp TCCCCCCCGGGEEECTTSC--EEECCCCSCSCCCCCCC-------------------------------------EETTE
T ss_pred CeeeeeeccccceecCCCC--EeecccceeeecCCCcc-------------------------------------cccCC
Confidence 9999999999999977664 89999999986543221 11569
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|||||++.+..|+.++|||||||++|||++| .+||... .......+.......+...++++++||.+||+.||++
T Consensus 167 t~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~ 245 (263)
T d2j4za1 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 245 (263)
T ss_dssp EGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcC-CCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhH
Confidence 9999999999999999999999999999999996 6677543 3344444444444455567899999999999999999
Q ss_pred CcCHHHHHcCCCCC
Q 002343 785 RPKAQNVLNHPFFW 798 (934)
Q Consensus 785 RPTa~evL~HPff~ 798 (934)
|||++|+|+||||.
T Consensus 246 R~t~~eil~hp~~~ 259 (263)
T d2j4za1 246 RPMLREVLEHPWIT 259 (263)
T ss_dssp SCCHHHHHTCHHHH
T ss_pred CcCHHHHHcCcCcC
Confidence 99999999999994
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-51 Score=445.31 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=200.0
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++.+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC-INKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHH-HHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHH-HHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 4588899999999999999855 5799999999975432 23466765 8899999999999999999999999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||.+ +|.+++. +...+++.+++.++.||+.||+|||++|
T Consensus 84 y~~gg~L~~~l~----------------------------------------~~~~l~e~~~~~i~~qi~~al~ylH~~~ 123 (271)
T d1nvra_ 84 YCSGGELFDRIE----------------------------------------PDIGMPEPDAQRFFHQLMAGVVYLHGIG 123 (271)
T ss_dssp CCTTEEGGGGSB----------------------------------------TTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCcHHHHHh----------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 8875 5665542 1345788999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+|||++.++. +||+|||+|+.+........ .+..+||
T Consensus 124 IiHrDiKp~NILl~~~~~--~KL~DFG~a~~~~~~~~~~~---------------------------------~~~~~GT 168 (271)
T d1nvra_ 124 ITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRERL---------------------------------LNKMCGT 168 (271)
T ss_dssp EECSCCCGGGEEECTTCC--EEECCCTTCEECEETTEECC---------------------------------BCCCCSC
T ss_pred CccCcccHHHEEECCCCC--EEEccchhheeeccCCcccc---------------------------------ccceeeC
Confidence 999999999999976654 99999999998754322111 1125799
Q ss_pred CccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcc--cccccCCCHHHHHHHHHcccCC
Q 002343 707 SGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRK--DLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 707 ~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~--~~~~~~~~~e~~dLI~~~L~~D 781 (934)
+.|||||++.+..+ +.++|||||||++|||++| .+||...... ......... .......++++++||.+||+.|
T Consensus 169 ~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 247 (271)
T d1nvra_ 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN 247 (271)
T ss_dssp GGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHS-SCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSS
T ss_pred cCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhC-CCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCC
Confidence 99999999988876 6889999999999999996 7777543322 222222221 1223456789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCCc
Q 002343 782 PDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~~ 800 (934)
|++|||++|+|+||||...
T Consensus 248 P~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 248 PSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp TTTSCCHHHHTTCTTTTCC
T ss_pred hhHCcCHHHHhcCHhhCcC
Confidence 9999999999999999643
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-51 Score=446.89 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=201.0
Q ss_pred ceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCC---hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
++|.+.+.||+|+||+||++. ..+|+.||||++.... .+...+|+. +++.++|||||++++++.+++.+||||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~ivmEy 98 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL-VMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHH-HHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence 468888999999999999985 4679999999986433 245667776 88999999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++. .+++++.+++.+++||+.||+|||++|||
T Consensus 99 ~~g----------g~L~~~~~------------------------------~~~l~~~~~~~i~~qi~~aL~yLH~~~ii 138 (293)
T d1yhwa1 99 LAG----------GSLTDVVT------------------------------ETCMDEGQIAAVCRECLQALEFLHSNQVI 138 (293)
T ss_dssp CTT----------CBHHHHHH------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred cCC----------CcHHHHhh------------------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 764 33333221 34678899999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+|+.+....... ...+||+.
T Consensus 139 HrDiKp~NILl~~~~~--vkl~DFG~a~~~~~~~~~~-----------------------------------~~~~gt~~ 181 (293)
T d1yhwa1 139 HRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR-----------------------------------STMVGTPY 181 (293)
T ss_dssp CCCCSGGGEEECTTCC--EEECCCTTCEECCSTTCCB-----------------------------------CCCCSCGG
T ss_pred ccCCcHHHeEECCCCc--Eeeccchhheeeccccccc-----------------------------------cccccCCC
Confidence 9999999999977664 9999999999875433211 11579999
Q ss_pred cccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HH-HHHHhhcc--cccccCCCHHHHHHHHHcccCCCCC
Q 002343 709 WQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RD-ANIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 709 Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~-~~i~~~~~--~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|||||++.+..|+.++|||||||++|+|++| .+||..... .. ..+..... ...+...++++++||.+||+.||++
T Consensus 182 Y~aPE~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 260 (293)
T d1yhwa1 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEK 260 (293)
T ss_dssp GCCHHHHSSSCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTT
T ss_pred ccChhhhcCCCCCchhceehHhHHHHHHhhC-CCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhH
Confidence 9999999999999999999999999999996 677754332 22 22332222 1223456789999999999999999
Q ss_pred CcCHHHHHcCCCCCC
Q 002343 785 RPKAQNVLNHPFFWT 799 (934)
Q Consensus 785 RPTa~evL~HPff~~ 799 (934)
|||++|+|+||||+.
T Consensus 261 R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 261 RGSAKELLQHQFLKI 275 (293)
T ss_dssp SCCHHHHTTCGGGGG
T ss_pred CcCHHHHhcCHhhCC
Confidence 999999999999964
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-50 Score=441.30 Aligned_cols=253 Identities=28% Similarity=0.391 Sum_probs=202.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+++.+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-VMSRLDHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHH-HHHHcCCCCeeEEEEEEEECCEEEEE
Confidence 4589999999999999999865 579999999986432 234566765 78899999999999999999999999
Q ss_pred EecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 546 LERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 546 mE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
||||.+ +|.+++ .. .+.+++.+++.++.||+.||+|||+
T Consensus 87 mEy~~gg~L~~~~-----------~~-----------------------------~~~l~e~~~~~~~~qi~~al~ylH~ 126 (288)
T d1uu3a_ 87 LSYAKNGELLKYI-----------RK-----------------------------IGSFDETCTRFYTAEIVSALEYLHG 126 (288)
T ss_dssp ECCCTTEEHHHHH-----------HH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCHHHhh-----------hc-----------------------------cCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 997764 444433 21 3567889999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.++. +||+|||+|+.+........ .+..+
T Consensus 127 ~~iiHrDiKp~NIll~~~~~--vkl~DFG~a~~~~~~~~~~~---------------------------------~~~~~ 171 (288)
T d1uu3a_ 127 KGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQAR---------------------------------ANSFV 171 (288)
T ss_dssp TTEECSCCSGGGEEECTTSC--EEECCCTTCEECC-------------------------------------------CC
T ss_pred ccEEcCcCCccccccCCCce--EEecccccceecccCCcccc---------------------------------ccccc
Confidence 99999999999999976664 99999999998754322111 11257
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
||+.|||||++.+..|+.++|||||||++|||++| .+||... .......+......++...++++++||.+||+.||+
T Consensus 172 GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~ 250 (288)
T d1uu3a_ 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 250 (288)
T ss_dssp CCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGG
T ss_pred CCccccCceeeccCCCCcccceehhhHHHHHHhhC-CCCCCCcCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHh
Confidence 99999999999999999999999999999999996 6777543 333333333333445566789999999999999999
Q ss_pred CCcCHHH------HHcCCCCCCccc
Q 002343 784 LRPKAQN------VLNHPFFWTADT 802 (934)
Q Consensus 784 ~RPTa~e------vL~HPff~~~~~ 802 (934)
+|||++| +++||||.+.++
T Consensus 251 ~R~t~~e~~~~~~i~~Hpff~~i~w 275 (288)
T d1uu3a_ 251 KRLGCEEMEGYGPLKAHPFFESVTW 275 (288)
T ss_dssp GSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HCcCHHHHcCCHHHHcCCccCCCCH
Confidence 9999987 689999987665
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-50 Score=444.59 Aligned_cols=254 Identities=25% Similarity=0.349 Sum_probs=208.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+++.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~-il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR-VLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHH-HHHhCCCCCEEEEEeeeccccccccc
Confidence 3588899999999999999854 679999999997532 234566765 88999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||. +|+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 84 ~ey~~----------gg~L~~~~~~-----------------------------~~~~~e~~~~~~~~qil~al~ylH~~ 124 (337)
T d1o6la_ 84 MEYAN----------GGELFFHLSR-----------------------------ERVFTEERARFYGAEIVSALEYLHSR 124 (337)
T ss_dssp EECCT----------TCBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeccC----------CCchhhhhhc-----------------------------ccCCcHHHHHHHHHHHhhhhhhhhhc
Confidence 99665 3444444332 45678899999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. +||+|||+|+......... ...+|
T Consensus 125 ~iiHRDlKP~NILl~~~g~--vkl~DFG~a~~~~~~~~~~-----------------------------------~~~~G 167 (337)
T d1o6la_ 125 DVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGATM-----------------------------------KTFCG 167 (337)
T ss_dssp TCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCTTCCB-----------------------------------CCCEE
T ss_pred CccccccCHHHeEecCCCC--EEEeecccccccccCCccc-----------------------------------cccee
Confidence 9999999999999977764 9999999998765432111 12579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
|+.|||||++.+..|+.++|||||||++|||++|..|+.+.........+......++...++++++||.+||++||++|
T Consensus 168 T~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R 247 (337)
T d1o6la_ 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247 (337)
T ss_dssp CGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred CHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHhhccCCchhh
Confidence 99999999999999999999999999999999974444455555445555555555667788999999999999999999
Q ss_pred cC-----HHHHHcCCCCCCccch
Q 002343 786 PK-----AQNVLNHPFFWTADTR 803 (934)
Q Consensus 786 PT-----a~evL~HPff~~~~~~ 803 (934)
++ ++|+++||||.+.++.
T Consensus 248 ~~~~~~~~~eil~Hp~f~~i~~~ 270 (337)
T d1o6la_ 248 LGGGPSDAKEVMEHRFFLSINWQ 270 (337)
T ss_dssp TTCSTTTHHHHHTSGGGTTCCHH
T ss_pred cccccccHHHHHcCcccccCCHH
Confidence 94 9999999999877654
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-50 Score=432.21 Aligned_cols=245 Identities=27% Similarity=0.383 Sum_probs=191.9
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec----CCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD----QDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~ 542 (934)
+.|++.++||+|+||+||++.. .+++.||||++..... +...+|++ +++.++|||||++++++.+ +..+
T Consensus 9 ry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~~~~ 87 (270)
T d1t4ha_ 9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE-MLKGLQHPNIVRFYDSWESTVKGKKCI 87 (270)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred CEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHH-HHHhCCCCCeeeEEEEEeeccccCCEE
Confidence 4567888999999999999854 5688999999875432 23456665 8899999999999999875 4578
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
|||||||++ |+|.+++.. ...+++.+++.++.||+.||+||
T Consensus 88 ~ivmE~~~~----------g~L~~~l~~-----------------------------~~~~~~~~~~~~~~qi~~gl~yL 128 (270)
T d1t4ha_ 88 VLVTELMTS----------GTLKTYLKR-----------------------------FKVMKIKVLRSWCRQILKGLQFL 128 (270)
T ss_dssp EEEEECCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC----------CcHHHHHhc-----------------------------cccccHHHHHHHHHHHHHHHHHH
Confidence 999997664 444444321 34578889999999999999999
Q ss_pred HHCC--CcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 623 HEIG--LIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 623 Hs~g--IVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
|+++ ||||||||+|||++. ++ .+||+|||+|+.......
T Consensus 129 H~~~~~IiHrDiKp~NILl~~~~~--~~Kl~DFGla~~~~~~~~------------------------------------ 170 (270)
T d1t4ha_ 129 HTRTPPIIHRDLKCDNIFITGPTG--SVKIGDLGLATLKRASFA------------------------------------ 170 (270)
T ss_dssp HTSSSCCCCSCCCGGGEEESSTTS--CEEECCTTGGGGCCTTSB------------------------------------
T ss_pred HHCCCCEEeCCcChhhceeeCCCC--CEEEeecCcceeccCCcc------------------------------------
Confidence 9998 999999999999964 33 499999999986433211
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhh-cc-cccccCCCHHHHHHHH
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKD-RK-DLFLVEHIPEAVDLFT 775 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~-~~-~~~~~~~~~e~~dLI~ 775 (934)
...+||+.|||||++.+ .|+.++|||||||++|||++| .+||.+.. ......+.. .. .......++++++||.
T Consensus 171 -~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g-~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~ 247 (270)
T d1t4ha_ 171 -KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATS-EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 247 (270)
T ss_dssp -EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHS-SCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred -CCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHC-CCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHH
Confidence 12579999999999865 699999999999999999996 77776432 222222222 22 2233456789999999
Q ss_pred HcccCCCCCCcCHHHHHcCCCCC
Q 002343 776 RLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 776 ~~L~~DP~~RPTa~evL~HPff~ 798 (934)
+||+.||++|||++|+|+||||+
T Consensus 248 ~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 248 GCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHccCCHhHCcCHHHHhCCcccC
Confidence 99999999999999999999994
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-50 Score=439.23 Aligned_cols=250 Identities=25% Similarity=0.325 Sum_probs=198.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.++|||||++++++.+++.+||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID-ILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHH-HHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence 4688899999999999999854 5689999999975432 34567776 78899999999999999999999999997
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+ |+|.+++.. ...++++.+++.++.||+.||+|||++|||
T Consensus 91 ~~~----------g~L~~~~~~----------------------------~~~~l~e~~~~~i~~qi~~gL~ylH~~~iv 132 (288)
T d2jfla1 91 CAG----------GAVDAVMLE----------------------------LERPLTESQIQVVCKQTLDALNYLHDNKII 132 (288)
T ss_dssp CTT----------EEHHHHHHH----------------------------HTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCC----------CcHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 764 333333221 134578899999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+|+.+...... .+..+||+.
T Consensus 133 HrDiKp~NIll~~~~~--~Kl~DFG~a~~~~~~~~~-----------------------------------~~~~~Gt~~ 175 (288)
T d2jfla1 133 HRDLKAGNILFTLDGD--IKLADFGVSAKNTRTIQR-----------------------------------RDSFIGTPY 175 (288)
T ss_dssp CCCCSGGGEEECTTSC--EEECCCTTCEECHHHHHH-----------------------------------HTCCCSCCT
T ss_pred EeecChhheeECCCCC--EEEEechhhhccCCCccc-----------------------------------ccccccccc
Confidence 9999999999977664 899999999765432110 012579999
Q ss_pred cccchhcc-----cCCCcccccccchhhhhHHhhcCCCCCCCCch-hHH-HHHHhhcccc--cccCCCHHHHHHHHHccc
Q 002343 709 WQAPEQLL-----QGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERD-ANIVKDRKDL--FLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 709 Y~APE~l~-----~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~-~~i~~~~~~~--~~~~~~~e~~dLI~~~L~ 779 (934)
|||||++. +..|+.++|||||||++|||++| .+||.... ... ..+.....+. .+...++++++||.+||+
T Consensus 176 y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~ 254 (288)
T d2jfla1 176 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 254 (288)
T ss_dssp TCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHS-SCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSC
T ss_pred cCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcc
Confidence 99999984 45689999999999999999996 67775433 222 3334333222 234567899999999999
Q ss_pred CCCCCCcCHHHHHcCCCCCC
Q 002343 780 PNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 780 ~DP~~RPTa~evL~HPff~~ 799 (934)
.||++|||++|+|+||||..
T Consensus 255 ~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 255 KNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp SSTTTSCCHHHHTTSGGGCC
T ss_pred CChhHCcCHHHHhcCcccCC
Confidence 99999999999999999964
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-50 Score=443.34 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=190.3
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++|||||++++++.+++.+||
T Consensus 6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~l 84 (307)
T d1a06a_ 6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA-VLHKIKHPNIVALDDIYESGGHLYL 84 (307)
T ss_dssp CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHH-HHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3556799999999999999999855 5689999999975432 23446765 8899999999999999999999999
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||. ++|.+++ .. ...+++.+++.++.||+.||+|||
T Consensus 85 vmE~~~gg~L~~~l-----------~~-----------------------------~~~l~e~~~~~~~~qi~~al~ylH 124 (307)
T d1a06a_ 85 IMQLVSGGELFDRI-----------VE-----------------------------KGFYTERDASRLIFQVLDAVKYLH 124 (307)
T ss_dssp EECCCCSCBHHHHH-----------HT-----------------------------CSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcHHHhh-----------hc-----------------------------ccCCCHHHHHHHHHHHHHHHHhhh
Confidence 999776 3555544 21 346789999999999999999999
Q ss_pred HCCCcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 624 EIGLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
++|||||||||+|||+.. +.+..+||+|||+|+........ ..
T Consensus 125 ~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~------------------------------------~~ 168 (307)
T d1a06a_ 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL------------------------------------ST 168 (307)
T ss_dssp HTTCCCSCCCGGGEEESSSSTTCCEEECCC--------------------------------------------------
T ss_pred hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCee------------------------------------ee
Confidence 999999999999999964 22346999999999865433211 12
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch-hHHH-HHHhhcccc---cccCCCHHHHHHHHHc
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF-ERDA-NIVKDRKDL---FLVEHIPEAVDLFTRL 777 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~~~~-~i~~~~~~~---~~~~~~~e~~dLI~~~ 777 (934)
.+||+.|||||++.+..|+.++|||||||++|||++| .+||.... .... .+....... .....++++++||.+|
T Consensus 169 ~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 247 (307)
T d1a06a_ 169 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 247 (307)
T ss_dssp ----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred eeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhC-CCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHH
Confidence 5699999999999999999999999999999999996 67775543 3322 333332222 2245678999999999
Q ss_pred ccCCCCCCcCHHHHHcCCCCCC
Q 002343 778 LDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 778 L~~DP~~RPTa~evL~HPff~~ 799 (934)
|+.||++|||++|+++||||.+
T Consensus 248 L~~dP~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 248 MEKDPEKRFTCEQALQHPWIAG 269 (307)
T ss_dssp SCSSGGGSCCHHHHHHSTTTTS
T ss_pred ccCCHhHCcCHHHHhcCHhhCC
Confidence 9999999999999999999965
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=435.21 Aligned_cols=256 Identities=22% Similarity=0.332 Sum_probs=203.7
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC---------hhHHHHHHHHHHHhCCCCceeEEEEEEecC
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~---------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~ 539 (934)
.+.++|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.++
T Consensus 7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~ 85 (293)
T d1jksa_ 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS-ILKEIQHPNVITLHEVYENK 85 (293)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHHHCCCTTBCCEEEEEECS
T ss_pred CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEEC
Confidence 3567899999999999999999865 579999999986532 134567776 78899999999999999999
Q ss_pred CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 540 ~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
+.+|||||||++ |+|.+++.. ..++++.+++.++.||+.||
T Consensus 86 ~~~~iv~E~~~g----------g~L~~~i~~-----------------------------~~~l~~~~~~~~~~qi~~al 126 (293)
T d1jksa_ 86 TDVILILELVAG----------GELFDFLAE-----------------------------KESLTEEEATEFLKQILNGV 126 (293)
T ss_dssp SEEEEEEECCCS----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCC----------ccccchhcc-----------------------------ccccchhHHHHHHHHHHHHH
Confidence 999999997764 334333321 34578899999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCC--ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKS--FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~--~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
+|||++|||||||||+|||++.++. ..+||+|||+|+.+.......
T Consensus 127 ~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~-------------------------------- 174 (293)
T d1jksa_ 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-------------------------------- 174 (293)
T ss_dssp HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCS--------------------------------
T ss_pred HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCcccc--------------------------------
Confidence 9999999999999999999976553 359999999998775432211
Q ss_pred ceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHH-HHHhhccc---ccccCCCHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDA-NIVKDRKD---LFLVEHIPEAVD 772 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~-~i~~~~~~---~~~~~~~~e~~d 772 (934)
...||+.|||||++.+..++.++|||||||++|||++| .+||.. ...... ++...... ......++++++
T Consensus 175 ----~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (293)
T d1jksa_ 175 ----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKD 249 (293)
T ss_dssp ----CCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHH
T ss_pred ----ccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcC-CCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHH
Confidence 14699999999999999999999999999999999997 666654 333333 23332221 122456789999
Q ss_pred HHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 773 LFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 773 LI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
||.+||+.||++|||++|+|+||||+..+.
T Consensus 250 li~~~L~~dP~~R~s~~eil~hp~~~~~~~ 279 (293)
T d1jksa_ 250 FIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 279 (293)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred HHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence 999999999999999999999999976554
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-50 Score=434.50 Aligned_cols=250 Identities=25% Similarity=0.379 Sum_probs=189.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yL 544 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|++ +++.++|||||++++++.+ ++.+||
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVN-LLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHH-HTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHH-HHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 3588899999999999999854 5799999999975432 23456665 7889999999999999865 467999
Q ss_pred EEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||++ +|.+++ .... .....+++.+++.++.||+.||+|||
T Consensus 83 vmEy~~~g~L~~~i-----------~~~~-------------------------~~~~~l~e~~~~~i~~qi~~al~ylH 126 (269)
T d2java1 83 VMEYCEGGDLASVI-----------TKGT-------------------------KERQYLDEEFVLRVMTQLTLALKECH 126 (269)
T ss_dssp EEECCTTEEHHHHH-----------HHHH-------------------------HHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcHHHHH-----------Hhcc-------------------------ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9997764 555544 2110 01356889999999999999999999
Q ss_pred HCC-----CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 624 EIG-----LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 624 s~g-----IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
++| ||||||||+||||+.++. +||+|||+|+.+..+....
T Consensus 127 ~~~~~~~~IiHrDiKp~NIll~~~~~--vkl~DFG~a~~~~~~~~~~--------------------------------- 171 (269)
T d2java1 127 RRSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGLARILNHDTSFA--------------------------------- 171 (269)
T ss_dssp HHCC---------CCGGGEEECTTSC--EEECCHHHHHHC----------------------------------------
T ss_pred HhcCCCCCEEeCcCchhhcCcCCCCc--EEEeeccceeecccCCCcc---------------------------------
Confidence 976 999999999999976654 9999999999875432211
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccccccCCCHHHHHHHHH
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
+..+||+.|||||++.+..|+.++|||||||++|||+|| .+||..... ... .+........+...++++.+||.+
T Consensus 172 --~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~ 248 (269)
T d2java1 172 --KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 248 (269)
T ss_dssp ------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred --ccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHH
Confidence 125799999999999999999999999999999999996 677765433 222 333333334455678999999999
Q ss_pred cccCCCCCCcCHHHHHcCCCC
Q 002343 777 LLDPNPDLRPKAQNVLNHPFF 797 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff 797 (934)
||+.||++|||++|+|+|||+
T Consensus 249 ~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 249 MLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HTCSSGGGSCCHHHHHTSTTC
T ss_pred HcCCChhHCcCHHHHHhCCcC
Confidence 999999999999999999995
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7e-50 Score=440.39 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=198.2
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.|...+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++.+||
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~~~~i 92 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-FLQKLRHPNTIQYRGCYLREHTAWL 92 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHH-HHHHCCCCCEeeEEEEEEECCEEEE
Confidence 45688999999999999999854 5789999999975432 23556776 7889999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+++.+.+.. ...++++.+++.++.||+.||+|||+
T Consensus 93 v~E~~~~g~l~~~~~---------------------------------------~~~~l~e~~~~~i~~qi~~aL~yLH~ 133 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEV---------------------------------------HKKPLQEVEIAAVTHGALQGLAYLHS 133 (309)
T ss_dssp EEECCSEEHHHHHHH---------------------------------------HTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCchHHHHH---------------------------------------hCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999888654332211 13567899999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.++ .+||+|||+|+...... ..+
T Consensus 134 ~~iiHrDiKp~NILl~~~~--~~Kl~DFG~a~~~~~~~---------------------------------------~~~ 172 (309)
T d1u5ra_ 134 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPAN---------------------------------------SFV 172 (309)
T ss_dssp TTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSSBC---------------------------------------CCC
T ss_pred CCEeccCCCcceEEECCCC--CEEEeecccccccCCCC---------------------------------------ccc
Confidence 9999999999999997665 59999999998653321 146
Q ss_pred CCCccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCc-hhHH-HHHHhhccc-ccccCCCHHHHHHHHHcc
Q 002343 705 GSSGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGES-FERD-ANIVKDRKD-LFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 705 GT~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~-~~i~~~~~~-~~~~~~~~e~~dLI~~~L 778 (934)
||+.|||||++.+ +.|+.++|||||||++|||++| .+||.+. .... ..+...... ......++++++||.+||
T Consensus 173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L 251 (309)
T d1u5ra_ 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 251 (309)
T ss_dssp SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHT
T ss_pred cCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHC-CCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHC
Confidence 9999999999864 4689999999999999999996 5666543 3222 233333322 233446789999999999
Q ss_pred cCCCCCCcCHHHHHcCCCCCC
Q 002343 779 DPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 779 ~~DP~~RPTa~evL~HPff~~ 799 (934)
+.||++|||++|+|+||||..
T Consensus 252 ~~dP~~Rpt~~ell~Hp~~~~ 272 (309)
T d1u5ra_ 252 QKIPQDRPTSEVLLKHRFVLR 272 (309)
T ss_dssp CSSGGGSCCHHHHTTCHHHHS
T ss_pred cCChhHCcCHHHHHhCHHhcC
Confidence 999999999999999999954
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=448.22 Aligned_cols=248 Identities=25% Similarity=0.360 Sum_probs=193.8
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++.+||||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ-VLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGG-GGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 35688899999999999999854 5689999999875432 34566776 788999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-I 625 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-~ 625 (934)
|||.+ |+|.+++.. ...+++.+++.++.||+.||+|||+ +
T Consensus 84 Ey~~g----------g~L~~~l~~-----------------------------~~~l~~~~~~~~~~qil~aL~yLH~~~ 124 (322)
T d1s9ja_ 84 EHMDG----------GSLDQVLKK-----------------------------AGRIPEQILGKVSIAVIKGLTYLREKH 124 (322)
T ss_dssp ECCTT----------EEHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCC----------CcHHHHHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 97764 333333321 3457888999999999999999997 5
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+||||+.++. +||+|||+|+.+..... +..+|
T Consensus 125 ~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~~~~-------------------------------------~~~~G 165 (322)
T d1s9ja_ 125 KIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMA-------------------------------------NSFVG 165 (322)
T ss_dssp CCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHHHTC----------------------------------------CC
T ss_pred CEEccccCHHHeeECCCCC--EEEeeCCCccccCCCcc-------------------------------------ccccC
Confidence 9999999999999976664 99999999987643211 12579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHHHHH-------------------------------
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERDANI------------------------------- 754 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i------------------------------- 754 (934)
|+.|||||++.+..|+.++||||+||++|||++| ++||..........
T Consensus 166 T~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (322)
T d1s9ja_ 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG-RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244 (322)
T ss_dssp SSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHS-SCCSSCCCTTHHHHHC-----------------------------
T ss_pred CccccCchHHcCCCCCcHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccc
Confidence 9999999999999999999999999999999996 66664321111000
Q ss_pred -------------Hhhcc-cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 755 -------------VKDRK-DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 755 -------------~~~~~-~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
..... .......+++++|||.+||+.||++||||+|+|+||||..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~ 303 (322)
T d1s9ja_ 245 RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303 (322)
T ss_dssp -CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred ccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence 00000 0111124679999999999999999999999999999954
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.6e-49 Score=444.89 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=203.5
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
-++|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.++|||||++++++.+++.+|||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~ivmE 103 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ-TMSVLRHPTLVNLHDAFEDDNEMVMIYE 103 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHH-HHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35689999999999999999854 5799999999976543 23456665 7888999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+ |+|.+++.. ....+++.+++.++.||+.||+|||++||
T Consensus 104 ~~~g----------g~L~~~l~~----------------------------~~~~l~e~~~~~i~~qi~~aL~ylH~~~i 145 (350)
T d1koaa2 104 FMSG----------GELFEKVAD----------------------------EHNKMSEDEAVEYMRQVCKGLCHMHENNY 145 (350)
T ss_dssp CCCS----------CBHHHHHTC----------------------------TTSCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred cCCC----------CCHHHHHHh----------------------------hcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7653 444443321 12457889999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+|||++.+....+||+|||+|+.+...... ...+||+
T Consensus 146 iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~------------------------------------~~~~gT~ 189 (350)
T d1koaa2 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV------------------------------------KVTTGTA 189 (350)
T ss_dssp ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE------------------------------------EEECSCT
T ss_pred eeeeechhHeeeccCCCCeEEEeecchheeccccccc------------------------------------ceecCcc
Confidence 9999999999997654456999999999877543221 1256999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHH-HHHhhcc---cccccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDA-NIVKDRK---DLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~-~i~~~~~---~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|||||++.+..|+.++|||||||++|||++| .+||... ..... .+..... .......++++++||.+||+.||
T Consensus 190 ~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 268 (350)
T d1koaa2 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG-LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADP 268 (350)
T ss_dssp TTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSG
T ss_pred cccCHHHHcCCCCChhHhhhhhhHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence 99999999999999999999999999999996 6677543 33333 2332222 12224567899999999999999
Q ss_pred CCCcCHHHHHcCCCCCCcc
Q 002343 783 DLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~ 801 (934)
++|||++|+|+||||....
T Consensus 269 ~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 269 NTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp GGSCCHHHHHHSTTTSCTT
T ss_pred hHCcCHHHHhcCcccCCCC
Confidence 9999999999999997543
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.7e-49 Score=443.36 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=203.7
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
-+.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++|||||++++++.+++.+|||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~~~~ivmE 106 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS-IMNQLHHPKLINLHDAFEDKYEMVLILE 106 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHH-HHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHH-HHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35689999999999999999865 5799999999976543 23456775 8889999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||++ |+|.+++.. ...++++.+++.|+.||+.||+|||++||
T Consensus 107 ~~~g----------g~L~~~~~~----------------------------~~~~l~e~~~~~i~~qi~~aL~ylH~~~i 148 (352)
T d1koba_ 107 FLSG----------GELFDRIAA----------------------------EDYKMSEAEVINYMRQACEGLKHMHEHSI 148 (352)
T ss_dssp CCCC----------CBHHHHTTC----------------------------TTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred cCCC----------ChHHHHHHh----------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 7764 333333221 12457899999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+||||+......+||+|||+|+.+..+... ...+||+
T Consensus 149 iHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~------------------------------------~~~~gt~ 192 (352)
T d1koba_ 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV------------------------------------KVTTATA 192 (352)
T ss_dssp ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE------------------------------------EEECSSG
T ss_pred eecccccccccccccCCCeEEEeecccceecCCCCce------------------------------------eeccCcc
Confidence 9999999999997544456999999999987654321 1256999
Q ss_pred ccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccc----cccCCCHHHHHHHHHcccCCC
Q 002343 708 GWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDL----FLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 708 ~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~----~~~~~~~e~~dLI~~~L~~DP 782 (934)
.|||||++.+..|+.++|||||||++|+|+|| .+||... .......+...... .....++++++||.+||+.||
T Consensus 193 ~y~aPE~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp 271 (352)
T d1koba_ 193 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG-LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEP 271 (352)
T ss_dssp GGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSG
T ss_pred cccCHHHHcCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence 99999999999999999999999999999996 6677553 33333323222211 223567899999999999999
Q ss_pred CCCcCHHHHHcCCCCCCcc
Q 002343 783 DLRPKAQNVLNHPFFWTAD 801 (934)
Q Consensus 783 ~~RPTa~evL~HPff~~~~ 801 (934)
.+|||++|+|+||||....
T Consensus 272 ~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 272 RKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp GGSCCHHHHHTSTTTSSCC
T ss_pred hHCcCHHHHhcCHhhCCCc
Confidence 9999999999999997643
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.3e-49 Score=434.75 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=203.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+++.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-MLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHH-HHHhccCcChhheeeeEeeCCeeeeE
Confidence 3488899999999999999865 569999999996432 233455654 88999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||.++ ++..++.. ...+++.+++.++.||+.||+|||++
T Consensus 83 mE~~~gg----------~l~~~~~~-----------------------------~~~~~~~~~~~~~~qi~~al~~lH~~ 123 (316)
T d1fota_ 83 MDYIEGG----------ELFSLLRK-----------------------------SQRFPNPVAKFYAAEVCLALEYLHSK 123 (316)
T ss_dssp ECCCCSC----------BHHHHHHH-----------------------------TSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeecCCc----------cccccccc-----------------------------cccccccHHHHHHHHHHHhhhhhccC
Confidence 9987753 33332221 34567788899999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+||||+.++. +||+|||+|+.+..... ..+|
T Consensus 124 ~iiHrDiKp~NILl~~~g~--vkL~DFG~a~~~~~~~~--------------------------------------~~~G 163 (316)
T d1fota_ 124 DIIYRDLKPENILLDKNGH--IKITDFGFAKYVPDVTY--------------------------------------TLCG 163 (316)
T ss_dssp TEECCCCCGGGEEECTTSC--EEECCCSSCEECSSCBC--------------------------------------CCCS
T ss_pred cEEccccCchheeEcCCCC--EEEecCccceEeccccc--------------------------------------cccC
Confidence 9999999999999976664 99999999987653211 1579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCc-hhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|||||++.+..|+.++|||||||++|||++| .+||... .......+.......+...++++++||.+||+.||.+
T Consensus 164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~ 242 (316)
T d1fota_ 164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG-YTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQ 242 (316)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTT
T ss_pred cccccCHHHHcCCCCCchhhccccchhHHHHHhC-CCCCCCcCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHh
Confidence 9999999999999999999999999999999996 6666543 3333333434444455667899999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccch
Q 002343 785 RP-----KAQNVLNHPFFWTADTR 803 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~ 803 (934)
|+ |++++++||||.+.++.
T Consensus 243 R~~~~r~t~~~il~Hp~f~~i~~~ 266 (316)
T d1fota_ 243 RLGNLQNGTEDVKNHPWFKEVVWE 266 (316)
T ss_dssp CTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred ccccchhhHHHHHcCcccccCCHH
Confidence 96 99999999999887764
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-49 Score=436.54 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=205.9
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecC------ChhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~------~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.+. ..+...+|+..+...++|||||++++++.+++.+||||
T Consensus 3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivm 82 (320)
T d1xjda_ 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 82 (320)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEE
Confidence 488899999999999999855 57999999999643 22356677776667899999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||+ +|+|.+++.. ...+++.+++.++.||+.||+|||++|
T Consensus 83 Ey~~----------~g~L~~~i~~-----------------------------~~~~~e~~~~~~~~qi~~al~ylH~~~ 123 (320)
T d1xjda_ 83 EYLN----------GGDLMYHIQS-----------------------------CHKFDLSRATFYAAEIILGLQFLHSKG 123 (320)
T ss_dssp ECCT----------TCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eecC----------CCcHHHHhhc-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9665 4455554432 345788899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+|||++.++. +||+|||+|+......... +..+||
T Consensus 124 iiHrDikp~NiL~~~~~~--~kl~DFG~a~~~~~~~~~~-----------------------------------~~~~gt 166 (320)
T d1xjda_ 124 IVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGDAKT-----------------------------------NTFCGT 166 (320)
T ss_dssp CBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCTTCCB-----------------------------------CCCCSC
T ss_pred eeeccCcccceeecCCCc--eeccccchhhhcccccccc-----------------------------------cccCCC
Confidence 999999999999976654 8999999998654432211 125799
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCC-CchhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYG-ESFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLR 785 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~-~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~R 785 (934)
+.|+|||++.+..|+.++|||||||++|||++| .+||. .........+.......+...++++++||.+||+.||++|
T Consensus 167 ~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R 245 (320)
T d1xjda_ 167 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG-QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245 (320)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred CCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHhcccCCCCC
Confidence 999999999999999999999999999999996 66665 4444444444455555566678999999999999999999
Q ss_pred cCHH-HHHcCCCCCCccc
Q 002343 786 PKAQ-NVLNHPFFWTADT 802 (934)
Q Consensus 786 PTa~-evL~HPff~~~~~ 802 (934)
||+. ++++||||++.++
T Consensus 246 ~s~~~~l~~hpff~~~~~ 263 (320)
T d1xjda_ 246 LGVRGDIRQHPLFREINW 263 (320)
T ss_dssp BTTBSCGGGSGGGTTCCH
T ss_pred cCHHHHHHhCchhccCCH
Confidence 9995 8999999987554
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.7e-49 Score=439.91 Aligned_cols=251 Identities=25% Similarity=0.320 Sum_probs=206.2
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC------hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~------~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++|||||++++++.+.+..|+|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-ILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHH-HHHHcCCCcEeecccccccccccccc
Confidence 4688899999999999999855 579999999986432 234567776 78999999999999999999999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||+|.+ |+|..++.. ...+++.+++.++.||+.||+|||++
T Consensus 120 ~e~~~~----------g~l~~~l~~-----------------------------~~~l~e~~~~~i~~qi~~aL~yLH~~ 160 (350)
T d1rdqe_ 120 MEYVAG----------GEMFSHLRR-----------------------------IGRFSEPHARFYAAQIVLTFEYLHSL 160 (350)
T ss_dssp EECCTT----------CBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccc----------cchhhhHhh-----------------------------cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 996653 444444321 34678899999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++ .+||+|||+|+.+..... ..+|
T Consensus 161 ~iiHRDIKP~NILl~~~g--~ikL~DFG~a~~~~~~~~--------------------------------------~~~G 200 (350)
T d1rdqe_ 161 DLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKGRTW--------------------------------------TLCG 200 (350)
T ss_dssp TEECCCCSGGGEEECTTS--CEEECCCTTCEECSSCBC--------------------------------------CCEE
T ss_pred CEecCcCCHHHcccCCCC--CEEeeeceeeeecccccc--------------------------------------cccC
Confidence 999999999999997665 499999999987653211 1469
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCC-chhHHHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGE-SFERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~-~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
|+.|||||++.+..|+.++|||||||++|||+|| .+||.. ........+.......+...++++.+||.+||+.||.+
T Consensus 201 t~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~k 279 (350)
T d1rdqe_ 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTK 279 (350)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTT
T ss_pred ccccCCHHHHcCCCCCccccccchhHHHHHHHhC-CCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHhhhCHHh
Confidence 9999999999999999999999999999999997 566654 33333344444444556677899999999999999999
Q ss_pred Cc-----CHHHHHcCCCCCCccchh
Q 002343 785 RP-----KAQNVLNHPFFWTADTRL 804 (934)
Q Consensus 785 RP-----Ta~evL~HPff~~~~~~~ 804 (934)
|+ |++++++||||.+.++..
T Consensus 280 R~~~~r~t~~ell~Hp~f~~~~~~~ 304 (350)
T d1rdqe_ 280 RFGNLKNGVNDIKNHKWFATTDWIA 304 (350)
T ss_dssp CTTSSTTTTHHHHTSGGGTTCCHHH
T ss_pred ccccccccHHHHHcCccccCCCHHH
Confidence 94 999999999998877643
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-48 Score=432.33 Aligned_cols=252 Identities=20% Similarity=0.303 Sum_probs=203.6
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChh--HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHD--VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~--~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+-++|.+.+.||+|+||+||++.. .+|+.||||++.....+ ...+|++ +++.++|||||++++++.+++.+|||||
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~~~~lvmE 81 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-ILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHH-HHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHH-HHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 345689999999999999999855 56899999999766543 3456765 8899999999999999999999999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||.+ +|.+++ ... ...+++.+++.++.||+.||+|||++|
T Consensus 82 ~~~gg~L~~~i-----------~~~----------------------------~~~l~e~~~~~i~~qi~~al~yLH~~~ 122 (321)
T d1tkia_ 82 FISGLDIFERI-----------NTS----------------------------AFELNEREIVSYVHQVCEALQFLHSHN 122 (321)
T ss_dssp CCCCCBHHHHH-----------TSS----------------------------SCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCcHHHHH-----------Hhc----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 7764 454444 210 235788999999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+|||++.++...+||+|||+|+........ ...+||
T Consensus 123 iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~------------------------------------~~~~~t 166 (321)
T d1tkia_ 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF------------------------------------RLLFTA 166 (321)
T ss_dssp EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE------------------------------------EEEESC
T ss_pred CCcccccccceeecCCCceEEEEcccchhhccccCCcc------------------------------------cccccc
Confidence 99999999999998766667999999999876443211 124689
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHH-HHHhhcccc---cccCCCHHHHHHHHHcccCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDA-NIVKDRKDL---FLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~-~i~~~~~~~---~~~~~~~e~~dLI~~~L~~D 781 (934)
+.|+|||.+.+..|+.++|||||||++|+|++| .+||..... ... .+....... .....++++++||.+||+.|
T Consensus 167 ~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 245 (321)
T d1tkia_ 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG-INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245 (321)
T ss_dssp GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSS
T ss_pred cccccchhccCCCCCchhhcccHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCC
Confidence 999999999999999999999999999999996 677765433 332 333332221 12356789999999999999
Q ss_pred CCCCcCHHHHHcCCCCCC
Q 002343 782 PDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 782 P~~RPTa~evL~HPff~~ 799 (934)
|++|||++|+|+||||..
T Consensus 246 p~~R~s~~eil~hp~~~~ 263 (321)
T d1tkia_ 246 RKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp GGGSCCHHHHHHSHHHHS
T ss_pred hhHCcCHHHHhcCHhhcc
Confidence 999999999999999954
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-48 Score=418.78 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=190.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++...+++.||||++.+... +...+|++ +++.++|||||+++|++.+++..|||||||.
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHH-HHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 45788999999999999999877888999999975432 45566775 7889999999999999999999999999665
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.+++... ...+++..++.++.||+.||+|||+++||||
T Consensus 84 ----------~g~L~~~l~~~----------------------------~~~~~~~~~~~i~~qia~gl~~lH~~~iiHr 125 (263)
T d1sm2a_ 84 ----------HGCLSDYLRTQ----------------------------RGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125 (263)
T ss_dssp ----------TCBHHHHHHTT----------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred ----------CCcHHHHhhcc----------------------------ccCCCHHHHHHHHHHHHHHHHhhhccceeec
Confidence 44444444321 2346788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+|+.+........ ....||+.||
T Consensus 126 DlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~----------------------------------~~~~gt~~y~ 169 (263)
T d1sm2a_ 126 DLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSS----------------------------------TGTKFPVKWA 169 (263)
T ss_dssp TCSGGGEEECGGG--CEEECSCC----------------------------------------------------CTTSC
T ss_pred ccchhheeecCCC--CeEecccchheeccCCCceee----------------------------------cceecCcccC
Confidence 9999999997655 599999999987654322111 1145899999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..|+.++|||||||++|||+|++.+||...... ... +........+...++++.+||.+||+.||++|||+
T Consensus 170 aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~ 249 (263)
T d1sm2a_ 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAF 249 (263)
T ss_dssp CHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCH
Confidence 9999999999999999999999999999888888765432 223 33333333445567899999999999999999999
Q ss_pred HHHHcC
Q 002343 789 QNVLNH 794 (934)
Q Consensus 789 ~evL~H 794 (934)
+||++|
T Consensus 250 ~~il~~ 255 (263)
T d1sm2a_ 250 SRLLRQ 255 (263)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999976
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.1e-48 Score=436.72 Aligned_cols=258 Identities=26% Similarity=0.373 Sum_probs=202.0
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHH--HHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEI--QNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei--~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|. ..+++.++|||||++++++.+.+.+||
T Consensus 5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~i 84 (364)
T d1omwa3 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 84 (364)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEE
Confidence 488899999999999999865 5699999999864321 2233332 236677889999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||. +|+|.++|.. ...+++.+++.++.||+.||+|||+
T Consensus 85 vmE~~~----------gg~L~~~l~~-----------------------------~~~~~e~~~~~~~~qi~~aL~ylH~ 125 (364)
T d1omwa3 85 ILDLMN----------GGDLHYHLSQ-----------------------------HGVFSEADMRFYAAEIILGLEHMHN 125 (364)
T ss_dssp EECCCC----------SCBHHHHHHH-----------------------------HCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecC----------CCcHHHHHHh-----------------------------cccccHHHHHHHHHHHHHHHHHHHH
Confidence 999776 3444444322 3456788999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
+|||||||||+|||++.++. +||+|||+|+.+...... ..+
T Consensus 126 ~~iiHrDlKP~NILl~~~g~--iKl~DFGla~~~~~~~~~-------------------------------------~~~ 166 (364)
T d1omwa3 126 RFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKKKPH-------------------------------------ASV 166 (364)
T ss_dssp TTEECCCCSGGGEEECSSSC--EEECCCTTCEECSSSCCC-------------------------------------SCC
T ss_pred CCccceeeccceeEEcCCCc--EEEeeeceeeecCCCccc-------------------------------------ccc
Confidence 99999999999999976664 999999999876543211 146
Q ss_pred CCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHH---hhcccccccCCCHHHHHHHHHccc
Q 002343 705 GSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIV---KDRKDLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 705 GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~---~~~~~~~~~~~~~e~~dLI~~~L~ 779 (934)
||+.|||||++.. ..|+.++|||||||++|||+|| .+||..... ....+. .......+...++++++||.+||+
T Consensus 167 GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~ 245 (364)
T d1omwa3 167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQ 245 (364)
T ss_dssp SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS-SCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTC
T ss_pred cccccchhHHhhcCCCCCcccchhHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999975 4689999999999999999996 677754322 222222 222333445678999999999999
Q ss_pred CCCCCCcC-----HHHHHcCCCCCCccchhhhhhhh
Q 002343 780 PNPDLRPK-----AQNVLNHPFFWTADTRLSFLRDV 810 (934)
Q Consensus 780 ~DP~~RPT-----a~evL~HPff~~~~~~~~fl~~~ 810 (934)
.||++||| |+|+++||||++.++...+.+.+
T Consensus 246 ~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~ 281 (364)
T d1omwa3 246 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKY 281 (364)
T ss_dssp SSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCS
T ss_pred cCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCC
Confidence 99999999 79999999999888765554443
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-48 Score=422.26 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=200.5
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCC--hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~--~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
.+.|.+.+.||+|+||+||++...+++.||||++.... .+...+|+. +++.++|||||+++|++.+ +.+|||||||
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN-LMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHH-HHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 35788999999999999999887778899999997543 245567776 7888999999999998865 5679999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
+ +|+|.+++... ....+++.+++.|+.||+.||+|||+++|||
T Consensus 90 ~----------~g~L~~~~~~~---------------------------~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivH 132 (272)
T d1qpca_ 90 E----------NGSLVDFLKTP---------------------------SGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132 (272)
T ss_dssp T----------TCBHHHHTTSH---------------------------HHHTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred C----------CCcHHHHHhhc---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5 34444433211 1234788999999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+||||+.++ .+||+|||+|+.+........ +...||+.|
T Consensus 133 rDiKp~NIll~~~~--~~Kl~DFGla~~~~~~~~~~~----------------------------------~~~~gt~~y 176 (272)
T d1qpca_ 133 RDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAR----------------------------------EGAKFPIKW 176 (272)
T ss_dssp SCCSGGGEEECTTS--CEEECCCTTCEECSSSCEECC----------------------------------TTCCCCTTT
T ss_pred Cccchhheeeeccc--ceeeccccceEEccCCccccc----------------------------------cccCCcccc
Confidence 99999999996654 599999999998765332111 114689999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
||||++.++.++.++|||||||++|||+||+.+|+...... .. .+........+...++++.+||.+||+.||++|||
T Consensus 177 ~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt 256 (272)
T d1qpca_ 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256 (272)
T ss_dssp SCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcC
Confidence 99999999999999999999999999999888888764433 22 33333334445567789999999999999999999
Q ss_pred HHHHHc--CCCCC
Q 002343 788 AQNVLN--HPFFW 798 (934)
Q Consensus 788 a~evL~--HPff~ 798 (934)
+++|++ |+||.
T Consensus 257 ~~ei~~~L~~~ft 269 (272)
T d1qpca_ 257 FDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhh
Confidence 999988 77773
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-48 Score=419.62 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=195.8
Q ss_pred cceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh---------hHHHHHHHHHHHhCC--CCceeEEEEEEecC
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH---------DVALKEIQNLIASDQ--HPNIVRWYGVESDQ 539 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~---------~~~~~Ei~~ll~~l~--HpNIV~l~g~~~~~ 539 (934)
.++|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|+. +++.++ |||||++++++.++
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~-il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-LLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHH-HHHHHCSSSCSBCCEEEEEECS
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHH-HHHHhccCCCCccEEEEEEeeC
Confidence 45799999999999999999855 5789999999875321 12456776 555544 99999999999999
Q ss_pred CeEEEEEecccC--ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 DFVYLSLERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 ~~~yLVmE~c~~--sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+..|+|||+|.+ ++.+++ . +...+++.+++.++.||+.
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~-----------~-----------------------------~~~~l~e~~~~~~~~qi~~ 121 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFI-----------T-----------------------------ERGALQEELARSFFWQVLE 121 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHH-----------H-----------------------------HHCSCCHHHHHHHHHHHHH
T ss_pred CeEEEEEEeccCcchHHHHH-----------h-----------------------------ccCCCCHHHHHHHHHHHHH
Confidence 999999998865 222222 1 1356788999999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++|||||||||+|||++.+. ..+||+|||+|+.......
T Consensus 122 al~~lH~~~iiHrDiKp~NIll~~~~-~~vkl~DFG~a~~~~~~~~---------------------------------- 166 (273)
T d1xwsa_ 122 AVRHCHNCGVLHRDIKDENILIDLNR-GELKLIDFGSGALLKDTVY---------------------------------- 166 (273)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECCSSCB----------------------------------
T ss_pred HHHHHHHCCCccccCcccceEEecCC-CeEEECccccceecccccc----------------------------------
Confidence 99999999999999999999997553 3699999999986543211
Q ss_pred ceeecCCCCCccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHHHHHHhhcccccccCCCHHHHHHHHH
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFLVEHIPEAVDLFTR 776 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~~~i~~~~~~~~~~~~~~e~~dLI~~ 776 (934)
+..+||+.|||||++.+..+ +.++|||||||++|||++| .+||.... .+.. .........++++++||.+
T Consensus 167 ---~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~----~i~~-~~~~~~~~~s~~~~~li~~ 237 (273)
T d1xwsa_ 167 ---TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDE----EIIR-GQVFFRQRVSSECQHLIRW 237 (273)
T ss_dssp ---CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS-SCSCCSHH----HHHH-CCCCCSSCCCHHHHHHHHH
T ss_pred ---cccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhC-CCCCCCch----HHhh-cccCCCCCCCHHHHHHHHH
Confidence 12569999999999987765 6789999999999999996 77886532 2222 2334455678999999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
||+.||++|||++|+|+||||.+.
T Consensus 238 ~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 238 CLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HccCCHhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999653
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-48 Score=422.62 Aligned_cols=245 Identities=23% Similarity=0.302 Sum_probs=190.1
Q ss_pred eeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 478 NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.+.||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++|||||++++++.+++.+||||||
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK-LLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHH-HHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHH-HHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 46899999999999854 5699999999864321 24567776 78899999999999999999999999999
Q ss_pred ccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 549 c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
|.+++...+.. ....+++.+++.+++||+.||+|||++|||
T Consensus 82 ~~~~~~~~~~~---------------------------------------~~~~l~~~~~~~~~~qil~aL~~lH~~~ii 122 (299)
T d1ua2a_ 82 METDLEVIIKD---------------------------------------NSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122 (299)
T ss_dssp CSEEHHHHHTT---------------------------------------CCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcchHHhhhhh---------------------------------------cccCCCHHHHHHHHHHHHHHHHHhhcccee
Confidence 88754433311 124467788999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. +||+|||+|+......... ...+||+.
T Consensus 123 HrDiKp~NIli~~~~~--~KL~DFG~a~~~~~~~~~~-----------------------------------~~~~gt~~ 165 (299)
T d1ua2a_ 123 HRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAY-----------------------------------THQVVTRW 165 (299)
T ss_dssp CCCCCGGGEEECTTCC--EEECCCGGGSTTTSCCCCC-----------------------------------CCSCCCCT
T ss_pred cccCCcceEEecCCCc--cccccCccccccCCCcccc-----------------------------------cceecChh
Confidence 9999999999976654 8999999998765432211 11569999
Q ss_pred cccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhccc-------------------------
Q 002343 709 WQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDRKD------------------------- 760 (934)
Q Consensus 709 Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~~~------------------------- 760 (934)
|||||++.+. .|+.++|||||||++|||++| .+||...... . ..+.+....
T Consensus 166 y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g-~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (299)
T d1ua2a_ 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP 244 (299)
T ss_dssp TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCC
T ss_pred hccHHHHccCCCCChhhhhhhcchHHHHHHhC-cCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCC
Confidence 9999998755 579999999999999999996 6777543322 1 222211000
Q ss_pred --ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 761 --LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 761 --~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
......+++++|||.+||+.||++||||+|+|+||||++.
T Consensus 245 ~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 286 (299)
T d1ua2a_ 245 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286 (299)
T ss_dssp HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred hHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence 0012346799999999999999999999999999999753
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.9e-47 Score=414.50 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=196.8
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------------hHHHHHHHHHHHhC-CCCceeEEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------------DVALKEIQNLIASD-QHPNIVRWYGVESD 538 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------------~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~ 538 (934)
++|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.+ .|||||++++++.+
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD-ILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEEEEC
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHH-HHHHhcCCCCeEEEEeeccc
Confidence 5689999999999999999865 5789999999975421 23566776 55555 59999999999999
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
++.+|||||||++ |+|.++|.. ..++++.+++.++.||+.|
T Consensus 82 ~~~~~ivmE~~~~----------g~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~a 122 (277)
T d1phka_ 82 NTFFFLVFDLMKK----------GELFDYLTE-----------------------------KVTLSEKETRKIMRALLEV 122 (277)
T ss_dssp SSEEEEEEECCTT----------CBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCC----------chHHHHHHh-----------------------------cCCCCHHHHHHHHHHHHHH
Confidence 9999999996653 444444321 3467899999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++|||||||||+|||++.++. +||+|||+|+.+......
T Consensus 123 l~~lH~~~ivHrDlkp~Nill~~~~~--~kl~DFG~a~~~~~~~~~---------------------------------- 166 (277)
T d1phka_ 123 ICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKL---------------------------------- 166 (277)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECCTTCCB----------------------------------
T ss_pred HHHHHHcCCcccccccceEEEcCCCC--eEEccchheeEccCCCce----------------------------------
Confidence 99999999999999999999976654 899999999987553221
Q ss_pred eeecCCCCCccccchhccc------CCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccc---cccCCC
Q 002343 699 FFTVGYGSSGWQAPEQLLQ------GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDL---FLVEHI 767 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~------~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~---~~~~~~ 767 (934)
+..+||+.|+|||++.+ ..++.++||||+||++|||++| .+||....... . .+....... .....+
T Consensus 167 --~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 243 (277)
T d1phka_ 167 --REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS 243 (277)
T ss_dssp --CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSC
T ss_pred --eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC-CCCCCCCCHHHHHHHHHhCCCCCCCcccccCC
Confidence 11569999999999863 3468899999999999999996 67776554332 2 233332221 223578
Q ss_pred HHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 768 PEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 768 ~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
+++++||.+||+.||++|||++|+|+||||+
T Consensus 244 ~~~~~li~~~L~~~p~~R~s~~eil~h~~~~ 274 (277)
T d1phka_ 244 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274 (277)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence 9999999999999999999999999999995
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-47 Score=418.64 Aligned_cols=252 Identities=27% Similarity=0.415 Sum_probs=198.7
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
.|.+.+.||+|+||+||++.. .+|+.||||++.... .+...+|+. +++.++|||||++++++.+++.+|+|||
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~-il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS-LLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHH-HHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHH-HHHhCCCCcEEEeccccccccceeEEEe
Confidence 588899999999999999855 679999999986432 245567776 7899999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
||.+++.+++... ...++++.+++.++.||+.||+|||++||
T Consensus 82 ~~~~~~~~~~~~~--------------------------------------~~~~l~e~~~~~~~~qil~~L~yLH~~~I 123 (298)
T d1gz8a_ 82 FLHQDLKKFMDAS--------------------------------------ALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123 (298)
T ss_dssp CCSEEHHHHHHHT--------------------------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCchhhhhhhh--------------------------------------cccCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence 9988766554321 13568899999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+|||++.++ .+||+|||+|+......... ...+||+
T Consensus 124 iHrDiKpeNIl~~~~~--~~kl~DFG~a~~~~~~~~~~-----------------------------------~~~~gt~ 166 (298)
T d1gz8a_ 124 LHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTY-----------------------------------THEVVTL 166 (298)
T ss_dssp CCSCCCGGGEEECTTS--CEEECSTTHHHHHCCCSBCT-----------------------------------TCCBCCC
T ss_pred EccccCchheeecccC--cceeccCCcceeccCCcccc-----------------------------------eeecccc
Confidence 9999999999997665 48999999998765432211 1146999
Q ss_pred ccccchhcccCCC-cccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhccc------------------------
Q 002343 708 GWQAPEQLLQGRQ-TRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKD------------------------ 760 (934)
Q Consensus 708 ~Y~APE~l~~~~~-t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~------------------------ 760 (934)
.|+|||++....+ +.++|||||||++|+|++| .+||....... ..+......
T Consensus 167 ~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
T d1gz8a_ 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245 (298)
T ss_dssp TTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCC
T ss_pred eeeehhhhccccCCCccccccccchhhhHHhhC-CCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccc
Confidence 9999999887665 8899999999999999996 77775433221 122111000
Q ss_pred ----ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 761 ----LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 761 ----~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
......+++++|||.+||+.||++|||++|+|+||||.+..+
T Consensus 246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred cchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 001234578999999999999999999999999999976543
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-48 Score=429.75 Aligned_cols=250 Identities=23% Similarity=0.315 Sum_probs=194.3
Q ss_pred eEEE-eeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEEEEEe
Q 002343 474 LVVF-NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSLE 547 (934)
Q Consensus 474 ~~~~-~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~----~~~~yLVmE 547 (934)
.|.+ .+.||+|+||+||++.. .+|+.||||++.+. ....+|+..+++..+|||||++++++++ ++.+|||||
T Consensus 12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE 89 (335)
T d2ozaa1 12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 89 (335)
T ss_dssp TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence 4554 56799999999999854 67999999998643 4677888766777899999999999876 467999999
Q ss_pred cccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||++ +|.+++ ... ...++++.+++.++.||+.||+|||++|
T Consensus 90 y~~gg~L~~~i-----------~~~---------------------------~~~~l~e~~~~~i~~qi~~al~ylH~~~ 131 (335)
T d2ozaa1 90 CLDGGELFSRI-----------QDR---------------------------GDQAFTEREASEIMKSIGEAIQYLHSIN 131 (335)
T ss_dssp CCCSEEHHHHH-----------HSC---------------------------SCCCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCcHHHHH-----------Hhc---------------------------CCCCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 7764 555544 211 0235788999999999999999999999
Q ss_pred CcccCCCCCeEEEecCC-CceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 627 LIHRDLKPQNVLISKDK-SFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~-~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
||||||||+|||++.++ ...+||+|||+|+........ ...+|
T Consensus 132 iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~------------------------------------~~~~g 175 (335)
T d2ozaa1 132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL------------------------------------TTPCY 175 (335)
T ss_dssp EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCC------------------------------------CCCSC
T ss_pred CccccccccccccccccccccccccccceeeeccCCCcc------------------------------------ccccC
Confidence 99999999999997533 346999999999876543321 11579
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HH---hhcccc----cccCCCHHHHHHHHH
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IV---KDRKDL----FLVEHIPEAVDLFTR 776 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~---~~~~~~----~~~~~~~e~~dLI~~ 776 (934)
|+.|||||++.+..|+.++|||||||++|+|+|| .+||..... .... +. ...... .....++++++||.+
T Consensus 176 t~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg-~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 254 (335)
T d2ozaa1 176 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 254 (335)
T ss_dssp CCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTS-SCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHH
T ss_pred CcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 777744321 1111 11 111111 112457899999999
Q ss_pred cccCCCCCCcCHHHHHcCCCCCCc
Q 002343 777 LLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
||+.||++|||+.|+|+||||...
T Consensus 255 ~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 255 LLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp HSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred HccCChhHCcCHHHHHcCHHhhCC
Confidence 999999999999999999999543
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-47 Score=417.58 Aligned_cols=247 Identities=23% Similarity=0.305 Sum_probs=198.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c 549 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|+. +++.++|||||++++++.+++..|||||||
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~-il~~l~HpnIv~~~~~~~~~~~~~iv~E~~ 95 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQLLGVCTREPPFYIITEFM 95 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHH-HHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence 4688899999999999999865 4689999999975433 45667776 788999999999999999999999999966
Q ss_pred cCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 002343 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIH 629 (934)
Q Consensus 550 ~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVH 629 (934)
++ |+|.++|... ....+++..++.++.||+.||+|||++||||
T Consensus 96 ~~----------g~l~~~l~~~---------------------------~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiH 138 (287)
T d1opja_ 96 TY----------GNLLDYLREC---------------------------NRQEVSAVVLLYMATQISSAMEYLEKKNFIH 138 (287)
T ss_dssp TT----------CBHHHHHHHS---------------------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cC----------cchHHHhhhc---------------------------cccchHHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 63 4444443221 1245688899999999999999999999999
Q ss_pred cCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCcc
Q 002343 630 RDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGW 709 (934)
Q Consensus 630 RDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y 709 (934)
|||||+||||+.++ .+||+|||+|+....+..... +...||+.|
T Consensus 139 rDlKp~NILl~~~~--~~Kl~DFG~a~~~~~~~~~~~----------------------------------~~~~g~~~y 182 (287)
T d1opja_ 139 RDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAH----------------------------------AGAKFPIKW 182 (287)
T ss_dssp SCCSGGGEEECGGG--CEEECCCCCTTTCCSSSSEEE----------------------------------TTEEECGGG
T ss_pred CccccCeEEECCCC--cEEEccccceeecCCCCceee----------------------------------ccccccccc
Confidence 99999999997665 599999999987655432211 113489999
Q ss_pred ccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhc-ccccccCCCHHHHHHHHHcccCCCCCCcC
Q 002343 710 QAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDR-KDLFLVEHIPEAVDLFTRLLDPNPDLRPK 787 (934)
Q Consensus 710 ~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~-~~~~~~~~~~e~~dLI~~~L~~DP~~RPT 787 (934)
||||++.+..|+.++|||||||++|||++|+.+|+..... .....+... ....+...++++.+||.+||+.||++|||
T Consensus 183 ~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 262 (287)
T d1opja_ 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262 (287)
T ss_dssp CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence 9999999999999999999999999999988888765433 333344333 33344557789999999999999999999
Q ss_pred HHHHHc
Q 002343 788 AQNVLN 793 (934)
Q Consensus 788 a~evL~ 793 (934)
++||++
T Consensus 263 ~~ei~~ 268 (287)
T d1opja_ 263 FAEIHQ 268 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-47 Score=415.97 Aligned_cols=255 Identities=27% Similarity=0.395 Sum_probs=195.9
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ec-CcEEEEEEeecCC-----hhHHHHHHHH--HHHhCCCCceeEEEEEEec---
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YE-GRSVAVKRLVKTH-----HDVALKEIQN--LIASDQHPNIVRWYGVESD--- 538 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~-g~~VAVK~l~~~~-----~~~~~~Ei~~--ll~~l~HpNIV~l~g~~~~--- 538 (934)
..++|.+.++||+|+||+||++.. .+ ++.||||++.... .....+|+.. .++..+|||||++++++..
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 346799999999999999999865 34 6789999986432 2245677653 3445689999999999853
Q ss_pred --CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 539 --QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 539 --~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
...+|++||+|.+++..+... ....++++..++.++.||+
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~qi~ 126 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDK--------------------------------------VPEPGVPTETIKDMMFQLL 126 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHH--------------------------------------SCTTCSCHHHHHHHHHHHH
T ss_pred ccCceEEEEEEeccCCchhhhhh--------------------------------------ccCCCCCHHHHHHHHHHHH
Confidence 357999999988765443311 1135678899999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++|||||||||+|||++.++ .+||+|||+++........
T Consensus 127 ~aL~yLH~~~ivHrDiKp~NILi~~~~--~~kl~dfg~~~~~~~~~~~-------------------------------- 172 (305)
T d1blxa_ 127 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMAL-------------------------------- 172 (305)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECSCCSCCCCCGGGGG--------------------------------
T ss_pred HHHHHHHhCCEEecCCCccEEEEcCCC--CeeecchhhhhhhcccccC--------------------------------
Confidence 999999999999999999999997665 4999999998764432111
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-H-HHHHhhc----------------
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-D-ANIVKDR---------------- 758 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~-~~i~~~~---------------- 758 (934)
...+||+.|||||++.+..|+.++|||||||++|||++| .+||...... . ..+....
T Consensus 173 ----~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (305)
T d1blxa_ 173 ----TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247 (305)
T ss_dssp ----CCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCG
T ss_pred ----CCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC-CCCCCCCCHHHHHHHHHHhhCCCchhcccccccchh
Confidence 125799999999999999999999999999999999996 6777654322 1 1221110
Q ss_pred ----------ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 759 ----------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 759 ----------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
........+++++|||.+||++||++||||+|+|+||||++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~ 301 (305)
T d1blxa_ 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301 (305)
T ss_dssp GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred hhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence 00112234688999999999999999999999999999976543
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=407.76 Aligned_cols=245 Identities=21% Similarity=0.320 Sum_probs=198.0
Q ss_pred eEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
.|.+.++||+|+||+||++...+++.||||++.+... +...+|+. +++.++|||||+++|++.+++.+|+|||||.+
T Consensus 5 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~-~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~ 83 (258)
T d1k2pa_ 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 83 (258)
T ss_dssp CCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHH-HHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred HCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHH-HHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence 4567789999999999998877788999999976432 45566665 88999999999999999999999999997763
Q ss_pred -ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 552 -SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 552 -sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|.+++.. ....+++..+++++.||++||+|||++||+||
T Consensus 84 g~l~~~~~~---------------------------------------~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~ 124 (258)
T d1k2pa_ 84 GCLLNYLRE---------------------------------------MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124 (258)
T ss_dssp EEHHHHHHS---------------------------------------GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCS
T ss_pred CcHHHhhhc---------------------------------------cccCCcHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 44444321 12346778899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+|+.+........ +...||+.|+
T Consensus 125 dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~----------------------------------~~~~~t~~y~ 168 (258)
T d1k2pa_ 125 DLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSS----------------------------------VGSKFPVRWS 168 (258)
T ss_dssp CCSGGGEEECTTC--CEEECCCSSCCBCSSSSCCCC----------------------------------CCSCCCGGGC
T ss_pred cccceeEEEcCCC--cEEECcchhheeccCCCceee----------------------------------cccCCCCCcC
Confidence 9999999997655 499999999987655432211 1146899999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-H-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-A-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|||+|+|..||....... . .+........+...++++.+||.+||+.||++|||+
T Consensus 169 aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~ 248 (258)
T d1k2pa_ 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248 (258)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred CcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCH
Confidence 99999999999999999999999999997788887654332 2 233333334445567899999999999999999999
Q ss_pred HHHHcC
Q 002343 789 QNVLNH 794 (934)
Q Consensus 789 ~evL~H 794 (934)
+++++|
T Consensus 249 ~eil~~ 254 (258)
T d1k2pa_ 249 KILLSN 254 (258)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-47 Score=412.09 Aligned_cols=244 Identities=25% Similarity=0.365 Sum_probs=188.5
Q ss_pred eeecccCcEEEEEEEEe---cCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 479 KEIAKGSNGTVVLEGNY---EGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 479 ~~IG~GsfGtVy~~~~~---~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
++||+|+||+||++... .++.||||++..... +...+|+. +++.++|||||+++|++.++ ..|||||||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~ 90 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN-VMQQLDNPYIVRMIGICEAE-SWMLVMEMAE 90 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHH-HHHTCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHH-HHHhCCCCCCceEEEEeccC-CEEEEEEcCC
Confidence 57999999999998543 357899999864322 24556665 78899999999999999764 5789999776
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+ |+|.+++.. ...+++.+++.++.||+.||+|||+++||||
T Consensus 91 ~----------g~L~~~l~~-----------------------------~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHr 131 (277)
T d1xbba_ 91 L----------GPLNKYLQQ-----------------------------NRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131 (277)
T ss_dssp T----------EEHHHHHHH-----------------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred C----------CcHHHHHhh-----------------------------ccCCCHHHHHHHHHHHHHHHhhHHhCCcccC
Confidence 3 444443321 3457889999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++ .+||+|||+|+.+.......... ....||+.||
T Consensus 132 DlKp~Nill~~~~--~~kl~DFGla~~~~~~~~~~~~~--------------------------------~~~~gt~~y~ 177 (277)
T d1xbba_ 132 DLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQ--------------------------------THGKWPVKWY 177 (277)
T ss_dssp CCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC------------------------------------CCCGGGC
T ss_pred CCcchhhcccccC--cccccchhhhhhccccccccccc--------------------------------cccCCCceec
Confidence 9999999997765 59999999999876543222111 1246999999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.+..++.++|||||||++|||+|.|.+||....... ...+ .......+...++++.+||.+||+.||++|||+
T Consensus 178 APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~ 257 (277)
T d1xbba_ 178 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 257 (277)
T ss_dssp CHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred CchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCH
Confidence 99999999999999999999999999996788987654332 3333 333334455678899999999999999999999
Q ss_pred HHH---HcCCCC
Q 002343 789 QNV---LNHPFF 797 (934)
Q Consensus 789 ~ev---L~HPff 797 (934)
++| |+|+|+
T Consensus 258 ~~i~~~L~~~~~ 269 (277)
T d1xbba_ 258 AAVELRLRNYYY 269 (277)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhCHHh
Confidence 998 456554
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-47 Score=413.21 Aligned_cols=250 Identities=25% Similarity=0.348 Sum_probs=193.4
Q ss_pred eEEEee-eecccCcEEEEEEEE---ecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Q 002343 474 LVVFNK-EIAKGSNGTVVLEGN---YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (934)
Q Consensus 474 ~~~~~~-~IG~GsfGtVy~~~~---~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLV 545 (934)
.+.+.+ +||+|+||+||++.. .++..||||++..... +...+|+. +++.++|||||+++|++.+ +.+|||
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~g~~~~-~~~~lv 86 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLDNPYIVRLIGVCQA-EALMLV 86 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHH-HHHhCCCCCEeeEeeeecc-CeEEEE
Confidence 455566 599999999999843 3456899999975433 23456665 7888999999999999976 458999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||++ |+|.+++... ...+++.+++.++.||+.||+|||++
T Consensus 87 mE~~~~----------g~L~~~l~~~----------------------------~~~l~~~~~~~i~~qi~~gL~ylH~~ 128 (285)
T d1u59a_ 87 MEMAGG----------GPLHKFLVGK----------------------------REEIPVSNVAELLHQVSMGMKYLEEK 128 (285)
T ss_dssp EECCTT----------EEHHHHHTTC----------------------------TTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCC----------CcHHHHhhcc----------------------------ccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 997764 3343333211 23578889999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++ .+||+|||+|+.+.......... +...|
T Consensus 129 ~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~~~--------------------------------~~~~g 174 (285)
T d1u59a_ 129 NFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTAR--------------------------------SAGKW 174 (285)
T ss_dssp TEECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECCC--------------------------------CSSCC
T ss_pred CeecCcCchhheeeccCC--ceeeccchhhhcccccccccccc--------------------------------ccccc
Confidence 999999999999997765 59999999999876543322111 12569
Q ss_pred CCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhcccccccCCCHHHHHHHHHcccCCCC
Q 002343 706 SSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRKDLFLVEHIPEAVDLFTRLLDPNPD 783 (934)
Q Consensus 706 T~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~ 783 (934)
|+.|||||++.++.++.++|||||||++|||+|.|.+||..... .... +........+...++++.+||.+||+.||+
T Consensus 175 t~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~ 254 (285)
T d1u59a_ 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWE 254 (285)
T ss_dssp CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGG
T ss_pred CccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHh
Confidence 99999999999999999999999999999999966888876433 2223 333333444566788999999999999999
Q ss_pred CCcCHHHH---HcCCCC
Q 002343 784 LRPKAQNV---LNHPFF 797 (934)
Q Consensus 784 ~RPTa~ev---L~HPff 797 (934)
+|||+.+| |+|+|+
T Consensus 255 ~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 255 DRPDFLTVEQRMRACYY 271 (285)
T ss_dssp GSCCHHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHHH
Confidence 99999888 556665
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6e-47 Score=415.11 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=185.0
Q ss_pred cceEEEeeeecccCcEEEEEEEEe-cC---cEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNY-EG---RSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~-~g---~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~y 543 (934)
.+.|.+.+.||+|+||+||++... ++ ..||||++.....+ ...+|+. +++.++|||||+++|++.+++.+|
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~ 103 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS-IMGQFDHPNVIHLEGVVTKSTPVM 103 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHH-HHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHH-HHHhCCCCCCccEEEEEeeCCEEE
Confidence 356888999999999999998553 23 36999998654332 3456665 888999999999999999999999
Q ss_pred EEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 544 LVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+|||||.+ |+|.+++.. ....+++.+++.++.||++||+|||
T Consensus 104 iv~Ey~~~----------g~L~~~~~~----------------------------~~~~l~~~~~~~i~~qia~gl~yLH 145 (299)
T d1jpaa_ 104 IITEFMEN----------GSLDSFLRQ----------------------------NDGQFTVIQLVGMLRGIAAGMKYLA 145 (299)
T ss_dssp EEEECCTT----------EEHHHHHHT----------------------------TTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC----------Ccceeeecc----------------------------ccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99997764 333333321 1234788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++||||||||+||||+.++ ++||+|||+|+.+.......+.... ...
T Consensus 146 ~~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~------------------------------~~~ 193 (299)
T d1jpaa_ 146 DMNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDPTYTSA------------------------------LGG 193 (299)
T ss_dssp HTTCCCSCCCGGGEEECTTC--CEEECCC---------------------------------------------------
T ss_pred hCCCccCccccceEEECCCC--cEEECCcccceEccCCCCcceeeec------------------------------ccc
Confidence 99999999999999996655 5999999999987654332211110 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHh-hcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVK-DRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~-~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||+.|||||++.++.++.++|||||||++|||+|+|.+||.+.... ....+. ......+...++++.+||.+||+.|
T Consensus 194 ~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~ 273 (299)
T d1jpaa_ 194 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKD 273 (299)
T ss_dssp --CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred cCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCC
Confidence 58999999999999999999999999999999999778888764433 333333 3333344567789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||+.||+++
T Consensus 274 P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 274 RNHRPKFGQIVNT 286 (299)
T ss_dssp TTTSCCHHHHHHH
T ss_pred HhHCcCHHHHHHH
Confidence 9999999999864
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.2e-46 Score=407.43 Aligned_cols=248 Identities=25% Similarity=0.419 Sum_probs=196.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
++|.+.++||+|+||+||++...+|+.||||++..... +...+|+. +++.++|||||++++++.+++..|++||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~i~~e 80 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREIS-ILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHH-GGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHH-HHHhCCCCcEEeeeeecccCCceeEEEE
Confidence 46888999999999999999878899999999965432 35667776 7889999999999999999999999999
Q ss_pred cccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002343 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGL 627 (934)
Q Consensus 548 ~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gI 627 (934)
+|.+++.+.+.. ....+++.+++.++.||+.||+|||++||
T Consensus 81 ~~~~~~~~~~~~---------------------------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~I 121 (286)
T d1ob3a_ 81 HLDQDLKKLLDV---------------------------------------CEGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (286)
T ss_dssp CCSEEHHHHHHT---------------------------------------STTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eehhhhHHHHHh---------------------------------------hcCCcchhhhHHHHHHHHHHHHHhccCcE
Confidence 988765554421 13567899999999999999999999999
Q ss_pred cccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCC
Q 002343 628 IHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSS 707 (934)
Q Consensus 628 VHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~ 707 (934)
|||||||+|||++.++. +||+|||+|.......... ....||+
T Consensus 122 vHrDiKp~NIll~~~~~--~kl~DfG~a~~~~~~~~~~-----------------------------------~~~~~~~ 164 (286)
T d1ob3a_ 122 LHRDLKPQNLLINREGE--LKIADFGLARAFGIPVRKY-----------------------------------THEIVTL 164 (286)
T ss_dssp CCSCCCGGGEEECTTSC--EEECCTTHHHHHCC--------------------------------------------CCC
T ss_pred EecCCCCceeeEcCCCC--EEecccccceecccCcccc-----------------------------------ceecccc
Confidence 99999999999977664 8999999998765432111 1145899
Q ss_pred ccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcc-------------------------
Q 002343 708 GWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRK------------------------- 759 (934)
Q Consensus 708 ~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~------------------------- 759 (934)
.|+|||.+.+.. ++.++|||||||++|||++| .+||......+ .++.....
T Consensus 165 ~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T d1ob3a_ 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243 (286)
T ss_dssp TTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred hhhhHHHHhCCCCCCcceeehhcCcHHHHHHHC-CCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccC
Confidence 999999997654 69999999999999999996 67886543222 11111000
Q ss_pred ---cccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCC
Q 002343 760 ---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFW 798 (934)
Q Consensus 760 ---~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~ 798 (934)
.......+++++|||.+||+.||++|||++|+|+||||+
T Consensus 244 ~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~ 285 (286)
T d1ob3a_ 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (286)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred cchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 011223467999999999999999999999999999995
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-46 Score=408.42 Aligned_cols=254 Identities=23% Similarity=0.357 Sum_probs=197.4
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh--hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++...+++.||||++..... +...+|+. +++.++|||||+++|++.+ +..|+|||||.
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~-~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHH-HHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence 45888999999999999999877888999999975543 44566665 7889999999999999865 55799999666
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+ |+|..++... ....+++.+++.++.||+.||+|||++||+||
T Consensus 95 ~----------g~l~~~~~~~---------------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~ 137 (285)
T d1fmka3 95 K----------GSLLDFLKGE---------------------------TGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 137 (285)
T ss_dssp T----------CBHHHHHSHH---------------------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred C----------Cchhhhhhhc---------------------------ccccchHHHHHHHHHHHHHHHHHHhhhheecc
Confidence 3 4444333221 13457899999999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+||||+.++ .+||+|||+|+.+....... .+...||+.|+
T Consensus 138 DlKp~NIll~~~~--~~kl~DfGla~~~~~~~~~~----------------------------------~~~~~gt~~y~ 181 (285)
T d1fmka3 138 DLRAANILVGENL--VCKVADFGLARLIEDNEYTA----------------------------------RQGAKFPIKWT 181 (285)
T ss_dssp CCSGGGEEECGGG--CEEECCCCTTC------------------------------------------------CCGGGS
T ss_pred cccceEEEECCCC--cEEEcccchhhhccCCCcee----------------------------------ecccccccccc
Confidence 9999999997654 59999999998765432211 11246899999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.++.++.++|||||||++|||++|+.+|+...... ....+ .......+...++++++||.+||+.||++||++
T Consensus 182 aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 261 (285)
T d1fmka3 182 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261 (285)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCH
Confidence 9999999999999999999999999999888887765433 23333 333334455667899999999999999999999
Q ss_pred HHHHc--CCCCCCcc
Q 002343 789 QNVLN--HPFFWTAD 801 (934)
Q Consensus 789 ~evL~--HPff~~~~ 801 (934)
++|++ |+||....
T Consensus 262 ~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 262 EYLQAFLEDYFTSTE 276 (285)
T ss_dssp HHHHHHHHTTTSCSC
T ss_pred HHHHHHHhhhhcCCC
Confidence 99988 89986543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-46 Score=415.95 Aligned_cols=270 Identities=23% Similarity=0.294 Sum_probs=196.1
Q ss_pred ceEEEeeeecccCcEEEEEEEEec-C-----cEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE-G-----RSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~-g-----~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||+||++.... + ..||||.+..... ....+|+..+.+..+|||||++++++.+.+.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 568899999999999999986543 2 3799999864322 34567777555555999999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|||||||++ +|.+++....+.+.+...... .............+++.+++.++.||+.||+|
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y 179 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYE-----------------NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 179 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC--------------------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhc-----------------cccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 999997763 555555433222111000000 00000001123568899999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++|||||||||+|||++.++ .+||+|||+|+.......... .+
T Consensus 180 LH~~~IiHRDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~---------------------------------~~ 224 (325)
T d1rjba_ 180 LEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVV---------------------------------RG 224 (325)
T ss_dssp HHHTTEEETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTSEE---------------------------------ET
T ss_pred HHhCCeeeccCchhccccccCC--eEEEeeccccccccCCCceee---------------------------------ec
Confidence 9999999999999999997665 599999999987654332111 11
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhhccc-ccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKDRKD-LFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~~~~-~~~~~~~~e~~dLI~~~L 778 (934)
...||+.|||||++.++.|+.++|||||||++|||+|+|.+||.... .....++..... ..+...++++++||.+||
T Consensus 225 ~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl 304 (325)
T d1rjba_ 225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCW 304 (325)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred cccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHc
Confidence 24589999999999999999999999999999999996688886532 223344444332 334556789999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++|||++||++|
T Consensus 305 ~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 305 AFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhHCcCHHHHHHH
Confidence 9999999999999976
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=5e-46 Score=412.51 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=194.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEEecc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSLERC 549 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~--~~~~yLVmE~c 549 (934)
++|.+.++||+|+||+||++.. .+|+.||||++.+...+...+|+..+.....||||+++++++.. ...+|+|||||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~ 114 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 114 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence 5699999999999999999855 57999999999877777788898744344469999999999874 45799999988
Q ss_pred cCC-hhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002343 550 TCS-LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (934)
Q Consensus 550 ~~s-L~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIV 628 (934)
.++ |..+ ...+++.+++.+++||+.||+|||++|||
T Consensus 115 ~~~~L~~~-------------------------------------------~~~l~e~~i~~i~~qil~aL~~LH~~gIv 151 (328)
T d3bqca1 115 NNTDFKQL-------------------------------------------YQTLTDYDIRFYMYEILKALDYCHSMGIM 151 (328)
T ss_dssp CSCBGGGT-------------------------------------------TTSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCcHHHH-------------------------------------------hcCCCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 753 2211 13467889999999999999999999999
Q ss_pred ccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCc
Q 002343 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSG 708 (934)
Q Consensus 629 HRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~ 708 (934)
||||||+|||++.++. .+||+|||+|+.+...... ...+||+.
T Consensus 152 HrDiKp~NILi~~~~~-~vkl~DFG~a~~~~~~~~~------------------------------------~~~~~t~~ 194 (328)
T d3bqca1 152 HRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEY------------------------------------NVRVASRY 194 (328)
T ss_dssp CCCCSGGGEEEETTTT-EEEECCGGGCEECCTTCCC------------------------------------CSCCSCGG
T ss_pred cccccccceEEcCCCC-eeeecccccceeccCCCcc------------------------------------cccccCcc
Confidence 9999999999986654 5899999999876554221 11568999
Q ss_pred cccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCc-hhHH--HHHHhh---------------------------
Q 002343 709 WQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGES-FERD--ANIVKD--------------------------- 757 (934)
Q Consensus 709 Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~-~~~~--~~i~~~--------------------------- 757 (934)
|+|||++.+.. ++.++||||+||++|||++| .+||... .... ..+...
T Consensus 195 y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g-~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (328)
T d3bqca1 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFR-KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR 273 (328)
T ss_dssp GCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHT-CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCC
T ss_pred ccCcccccCCCCCCcccchhhhhhhhHHhccC-CCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccc
Confidence 99999988754 79999999999999999997 5555432 1111 111000
Q ss_pred ---------cccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCccc
Q 002343 758 ---------RKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 802 (934)
Q Consensus 758 ---------~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~~~ 802 (934)
.........+++++|||.+||+.||++|||++|+|+||||++..+
T Consensus 274 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~ 327 (328)
T d3bqca1 274 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 327 (328)
T ss_dssp CCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred ccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 000011224689999999999999999999999999999987654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-46 Score=404.51 Aligned_cols=247 Identities=25% Similarity=0.324 Sum_probs=186.5
Q ss_pred eEEEeeeecccCcEEEEEEEEecC-----cEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGNYEG-----RSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~~~g-----~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.|...++||+|+||+||++..... ..||||++.....+ ...+|+. +++.++|||||+++|++.+.+..|+
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~-il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG-IMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHH-HHHhcCCCCEeeeeEEEecCCceEE
Confidence 477789999999999999855432 47999999654432 3456665 8899999999999999999999999
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||+|.++ ++.+++.. ....+++.+++.++.||+.||+|||+
T Consensus 87 v~e~~~~~----------~l~~~~~~----------------------------~~~~~~~~~~~~i~~~i~~gl~~lH~ 128 (283)
T d1mqba_ 87 ITEYMENG----------ALDKFLRE----------------------------KDGEFSVLQLVGMLRGIAAGMKYLAN 128 (283)
T ss_dssp EEECCTTE----------EHHHHHHH----------------------------TTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccC----------cchhhhhc----------------------------ccccccHHHHHHHHHHHHHhhhhccc
Confidence 99987653 22222211 12457888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++||||||||+||||+.++ .+||+|||+|+.+......... .....
T Consensus 129 ~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~--------------------------------~~~~~ 174 (283)
T d1mqba_ 129 MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYT--------------------------------TSGGK 174 (283)
T ss_dssp TTCCCSCCCGGGEEECTTC--CEEECCCCC-------------------------------------------------C
T ss_pred cccccCccccceEEECCCC--eEEEcccchhhcccCCCccceE--------------------------------eccCC
Confidence 9999999999999997655 5999999999987654321110 01146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhh-cccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKD-RKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~-~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.|||||++.++.++.++|||||||++|||++++.+|+...... ....+.. .....+...++++.+||.+||+.||
T Consensus 175 gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p 254 (283)
T d1mqba_ 175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 254 (283)
T ss_dssp CCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSST
T ss_pred CCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCH
Confidence 8999999999999999999999999999999999878877654332 2333332 3333445567899999999999999
Q ss_pred CCCcCHHHHHc
Q 002343 783 DLRPKAQNVLN 793 (934)
Q Consensus 783 ~~RPTa~evL~ 793 (934)
++|||+.||++
T Consensus 255 ~~RPt~~eil~ 265 (283)
T d1mqba_ 255 ARRPKFADIVS 265 (283)
T ss_dssp TTSCCHHHHHH
T ss_pred hHCcCHHHHHH
Confidence 99999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-46 Score=408.78 Aligned_cols=254 Identities=25% Similarity=0.388 Sum_probs=191.6
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCC-----hhHHHHHHHHHHHhCCCCceeEEEEEEec--------
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESD-------- 538 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~-----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-------- 538 (934)
++|.+.+.||+|+||+||+|.. .+|+.||||++.... .....+|+. +++.++||||+++++++..
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~-il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHH-HHHHCCCTTBCCEEEEEEC--------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHH-HHHHhcCCCccceEeeeeccccccccc
Confidence 5788999999999999999865 579999999985432 245678876 7889999999999999865
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+.+|+|||+|.+++...... ....+++.+++.+++||+.|
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~i~~qil~~ 129 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN---------------------------------------VLVKFTLSEIKRVMQMLLNG 129 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC---------------------------------------TTCCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccCCCccchhhh---------------------------------------cccccccHHHHHHHHHHHHH
Confidence 346899999988765443311 13456788899999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++|||||||||+|||++.++. +||+|||+|+.+..........
T Consensus 130 l~~lH~~~ivHrDlKp~NILl~~~~~--~kl~dfg~~~~~~~~~~~~~~~------------------------------ 177 (318)
T d3blha1 130 LYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNR------------------------------ 177 (318)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCC-----CCC------------------------------
T ss_pred HHHhccCCEEecCcCchheeecCCCc--EEeeecceeeeccccccccccc------------------------------
Confidence 99999999999999999999977664 9999999998766433221111
Q ss_pred eeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHH-hhccc---cc----------
Q 002343 699 FFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIV-KDRKD---LF---------- 762 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~-~~~~~---~~---------- 762 (934)
....+||+.|+|||++.+. .|+.++|||||||++|||++| .+||...... ....+ ..... ..
T Consensus 178 -~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 255 (318)
T d3blha1 178 -YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR-SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 255 (318)
T ss_dssp -CCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC---
T ss_pred -ccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhC-CCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhh
Confidence 1125799999999999765 689999999999999999996 6777543322 21111 10000 00
Q ss_pred ------------------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 763 ------------------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 763 ------------------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
....+++++|||.+||+.||++||||+|+|+||||+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp ----CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred hhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence 00125688999999999999999999999999999853
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-46 Score=415.62 Aligned_cols=252 Identities=26% Similarity=0.348 Sum_probs=195.5
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCChhHHHHHHHHHHHhCCCCceeEEEEEEec------CCeEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD------QDFVYLS 545 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------~~~~yLV 545 (934)
..|...++||+|+||+||++.. .+|+.||||++.+... ...+|+. +++.++|||||++++++.. ..++|||
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~Ei~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 97 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKNRELQ-IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-SCCHHHH-HHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-HHHHHHH-HHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence 3588889999999999999865 5699999999975432 2346776 7788999999999999853 3468999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||++++.+.+.. . ......+++.+++.+++||+.||+|||++
T Consensus 98 ~Ey~~~~~~~~l~~-------~-----------------------------~~~~~~l~~~~~~~i~~qil~aL~yLH~~ 141 (350)
T d1q5ka_ 98 LDYVPETVYRVARH-------Y-----------------------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141 (350)
T ss_dssp EECCSEEHHHHHHH-------H-----------------------------HHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeccCCccHHHHHh-------h-----------------------------hhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 99998776554421 0 01145688999999999999999999999
Q ss_pred CCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCC
Q 002343 626 GLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYG 705 (934)
Q Consensus 626 gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~G 705 (934)
|||||||||+|||++.++. .+||+|||+|+.+....... ..+|
T Consensus 142 ~IiHrDiKp~NILl~~~~~-~~kl~DFG~a~~~~~~~~~~------------------------------------~~~g 184 (350)
T d1q5ka_ 142 GICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNV------------------------------------SYIC 184 (350)
T ss_dssp TEECCCCCGGGEEECTTTC-CEEECCCTTCEECCTTSCCC------------------------------------SCCS
T ss_pred CCcccCCCcceEEEecCCC-ceeEecccchhhccCCcccc------------------------------------cccc
Confidence 9999999999999976653 58999999998765432211 1469
Q ss_pred CCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhh------------c------------
Q 002343 706 SSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKD------------R------------ 758 (934)
Q Consensus 706 T~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~------------~------------ 758 (934)
|+.|+|||.+.+ ..|+.++||||+||++|||++| .+||....... ..+.+. .
T Consensus 185 t~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g-~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 263 (350)
T d1q5ka_ 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263 (350)
T ss_dssp CTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHT-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCC
T ss_pred cccccChHHhhcccCCCcceeecccceEEEehhhC-CCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccc
Confidence 999999999875 4689999999999999999996 67775432221 111110 0
Q ss_pred ----ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 ----KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 ----~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
........++++.|||.+||+.||++||||.|+|+||||...
T Consensus 264 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp CCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred cCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 001122356899999999999999999999999999999653
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-46 Score=404.78 Aligned_cols=243 Identities=23% Similarity=0.321 Sum_probs=181.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE 547 (934)
+.|.+.+.||+|+||+||++.. ...||||++..... +...+|+. +++.++|||||++++++.+ +.+|||||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~--~~~vAvK~~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG-VLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEES--SSEEEEEECCCSSCCTTHHHHHHHHHH-HHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEE--CCEEEEEEEEcccCCHHHHHHHHHHHH-HHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 4567788999999999999743 34699999864321 23445665 8889999999999998754 56899999
Q ss_pred ccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 548 ~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
||+ ++|.+++ ... ...+++.+++.++.||+.||+|||+++
T Consensus 84 y~~~g~L~~~l-----------~~~----------------------------~~~~~~~~~~~i~~qi~~gl~yLH~~~ 124 (276)
T d1uwha_ 84 WCEGSSLYHHL-----------HII----------------------------ETKFEMIKLIDIARQTAQGMDYLHAKS 124 (276)
T ss_dssp CCCEEEHHHHH-----------HTS----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCHHHHH-----------hhc----------------------------cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 776 3454444 211 234688899999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+||||+.++ .+||+|||+|+.......... .+...||
T Consensus 125 ivHrDlKp~NiLl~~~~--~~Kl~DFGla~~~~~~~~~~~---------------------------------~~~~~gt 169 (276)
T d1uwha_ 125 IIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQ---------------------------------FEQLSGS 169 (276)
T ss_dssp CCCSCCCGGGEEEETTS--SEEECCCCCSCC---------------------------------------------CCCC
T ss_pred EeccccCHHHEEEcCCC--CEEEccccceeeccccCCccc---------------------------------ccccccC
Confidence 99999999999997665 499999999987654322111 1125799
Q ss_pred Cccccchhccc---CCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhccc-----ccccCCCHHHHHHHHH
Q 002343 707 SGWQAPEQLLQ---GRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRKD-----LFLVEHIPEAVDLFTR 776 (934)
Q Consensus 707 ~~Y~APE~l~~---~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~~-----~~~~~~~~e~~dLI~~ 776 (934)
+.|||||++.+ ..|+.++|||||||+||||+|| .+||..... .....+..... ......++++.+||.+
T Consensus 170 ~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg-~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~ 248 (276)
T d1uwha_ 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248 (276)
T ss_dssp GGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHS-SCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHH
T ss_pred cccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHC-CCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHH
Confidence 99999999964 3589999999999999999996 677765322 22223322211 1233457899999999
Q ss_pred cccCCCCCCcCHHHHHcC
Q 002343 777 LLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 777 ~L~~DP~~RPTa~evL~H 794 (934)
||+.||++|||++||++|
T Consensus 249 cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 249 CLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHH
Confidence 999999999999999975
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=412.98 Aligned_cols=254 Identities=25% Similarity=0.361 Sum_probs=194.1
Q ss_pred eecceEEEeeeecccCcEEEEEEE-EecCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~-~~~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~---- 540 (934)
.++.+|.+.+.||+|+||+||++. ..+|+.||||++.+... +.+.+|+. +++.++|||||++++++....
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~-il~~l~hp~iv~~~~~~~~~~~~~~ 83 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK-ILLRFRHENIIGINDIIRAPTIEQM 83 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHH-HHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHH-HHHHcCCCCCCcEEEEEeecccccc
Confidence 466789999999999999999985 46799999999975443 24566776 788899999999999987653
Q ss_pred -eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 -FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 -~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
..||++++|+++|.+++. ..++++.+++.++.||+.||
T Consensus 84 ~~~~l~~~~~~g~L~~~l~-----------------------------------------~~~l~~~~i~~i~~qil~al 122 (345)
T d1pmea_ 84 KDVYLVTHLMGADLYKLLK-----------------------------------------TQHLSNDHICYFLYQILRGL 122 (345)
T ss_dssp CCEEEEEECCCEEHHHHHH-----------------------------------------HCCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeecCCchhhhhh-----------------------------------------cCCCCHHHHHHHHHHHHHHH
Confidence 478888777667766652 24578899999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||++|||||||||+|||++.++ .+||+|||+|+............
T Consensus 123 ~yLH~~~iiHRDIKp~NILl~~~~--~~kl~DfG~a~~~~~~~~~~~~~------------------------------- 169 (345)
T d1pmea_ 123 KYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFL------------------------------- 169 (345)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCGGGCBCCTT-------------------------------
T ss_pred HHHHHCCCcCCCCCcceEEECCCC--CEEEcccCceeeccCCCccceee-------------------------------
Confidence 999999999999999999997665 49999999998765433221111
Q ss_pred eecCCCCCccccchhccc-CCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHh--------------------
Q 002343 700 FTVGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVK-------------------- 756 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~-~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~-------------------- 756 (934)
...+||+.|+|||++.. ..++.++||||+||++|+|++| .+||....... .. ...
T Consensus 170 -~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T d1pmea_ 170 -TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 247 (345)
T ss_dssp -CCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred -ccccccceechHHHhhcCCCCCchhhhhccCceehHHhhC-CCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence 12579999999999854 5679999999999999999997 66775432211 10 000
Q ss_pred ---hccc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 757 ---DRKD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 757 ---~~~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.... ......++++++||.+||+.||++||||+|+|+||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 0000 0122446789999999999999999999999999999744
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-46 Score=414.94 Aligned_cols=247 Identities=27% Similarity=0.442 Sum_probs=190.2
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCC----
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~---- 540 (934)
+.++|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|++ +++.++|||||+++++|...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~-il~~l~hpniv~l~~~~~~~~~~~~ 94 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-LLKHMRHENVIGLLDVFTPDETLDD 94 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHH-HHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHH-HHHhcCCCCeeEEEEEeccCccccc
Confidence 567899999999999999999854 5699999999975432 34567776 778899999999999998755
Q ss_pred --eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 541 --~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+|||||||+.+|..++ +..++++..++.+++||+.|
T Consensus 95 ~~~~~lv~e~~~~~l~~~~-----------------------------------------~~~~l~~~~~~~~~~qi~~a 133 (346)
T d1cm8a_ 95 FTDFYLVMPFMGTDLGKLM-----------------------------------------KHEKLGEDRIQFLVYQMLKG 133 (346)
T ss_dssp CCCCEEEEECCSEEHHHHH-----------------------------------------HHCCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEecccccHHHHH-----------------------------------------HhccccHHHHHHHHHHHHHH
Confidence 57999999976554433 13567899999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++|||||||||+|||++.++. +||+|||+|+.......
T Consensus 134 L~~LH~~~IiHrDiKp~NIL~~~~~~--~kl~Dfg~a~~~~~~~~----------------------------------- 176 (346)
T d1cm8a_ 134 LRYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQADSEMT----------------------------------- 176 (346)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCSSCC-----------------------------------
T ss_pred HHHHHhCCCcccccCcchhhcccccc--cccccccceeccCCccc-----------------------------------
Confidence 99999999999999999999976664 89999999987643221
Q ss_pred eeecCCCCCccccchhcccC-CCcccccccchhhhhHHhhcCCCCCCCCchhHH-HH-HHh-------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQG-RQTRAIDLFSLGCILFFCITGGKHPYGESFERD-AN-IVK------------------- 756 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~-~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~-i~~------------------- 756 (934)
..+||+.|+|||++.+. .++.++||||+||++|+|++| .+||....... .. ...
T Consensus 177 ---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 177 ---GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG-KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp ---SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred ---cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHC-cCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 15699999999999865 468999999999999999996 66775432211 11 000
Q ss_pred ----hccc-------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 757 ----DRKD-------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 757 ----~~~~-------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
.... ......+++++|||.+||+.||++||||+|+|+||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~ 307 (346)
T d1cm8a_ 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307 (346)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence 0000 0122346899999999999999999999999999999764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-45 Score=403.57 Aligned_cols=264 Identities=22% Similarity=0.317 Sum_probs=188.6
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCe
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDF 541 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~ 541 (934)
+.|.+.+.||+|+||+||++... +++.||||++..... +...+|+..+.+..+|+|||++++++.. ++.
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 56889999999999999998543 357899999875433 2345666667777799999999998766 457
Q ss_pred EEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 542 ~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+|+|||||+ +|+|.++|+........ ............+++.+++.++.||++||+|
T Consensus 93 ~~iv~E~~~----------~g~L~~~l~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~y 149 (299)
T d1ywna1 93 LMVIVEFCK----------FGNLSTYLRSKRNEFVP-------------YKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 149 (299)
T ss_dssp CEEEEECCT----------TCBHHHHHHHTGGGBCC------------------------CBCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecC----------CCcHHHHHHhccccccc-------------cccchhhhhcccCCHHHHHHHHHHHHHHHHH
Confidence 999999776 34444444332111000 0000001123467899999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++|||||||||+||||+.++ .+||+|||+|+........... +
T Consensus 150 lH~~~ivHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~~~---------------------------------~ 194 (299)
T d1ywna1 150 LASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRK---------------------------------G 194 (299)
T ss_dssp HHHTTCCCSCCCGGGEEECGGG--CEEECC------CCSCTTSCCT---------------------------------T
T ss_pred HHhCCCcCCcCCccceeECCCC--cEEEccCcchhhcccccccccc---------------------------------C
Confidence 9999999999999999997655 5999999999876543322111 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch--hHHHHHHhh-cccccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF--ERDANIVKD-RKDLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~--~~~~~i~~~-~~~~~~~~~~~e~~dLI~~~L 778 (934)
..+||+.|||||++.++.++.++|||||||++|||+||+.+||.... ......+.. .....+...++++.+||.+||
T Consensus 195 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 274 (299)
T d1ywna1 195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 274 (299)
T ss_dssp SCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred ceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence 25699999999999999999999999999999999998888886532 222333333 233334556789999999999
Q ss_pred cCCCCCCcCHHHHHcC
Q 002343 779 DPNPDLRPKAQNVLNH 794 (934)
Q Consensus 779 ~~DP~~RPTa~evL~H 794 (934)
+.||++|||++|+++|
T Consensus 275 ~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 275 HGEPSQRPTFSELVEH 290 (299)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhHCcCHHHHHHH
Confidence 9999999999999987
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=399.12 Aligned_cols=246 Identities=24% Similarity=0.363 Sum_probs=184.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEe----cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~----~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.+.||+|+||+||++... .+..||||.+.....+ ...+|+. +++.++|||||+++|++. ++.+|+
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 57899999999999999998543 2457999998654332 3445554 888999999999999986 467899
Q ss_pred EEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (934)
Q Consensus 545 VmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs 624 (934)
|||||.+ |++.+++.. ....+++.+++.++.||+.||+|||+
T Consensus 85 v~E~~~~----------g~l~~~~~~----------------------------~~~~l~~~~~~~~~~qi~~gl~ylH~ 126 (273)
T d1mp8a_ 85 IMELCTL----------GELRSFLQV----------------------------RKYSLDLASLILYAYQLSTALAYLES 126 (273)
T ss_dssp EEECCTT----------EEHHHHHHH----------------------------TTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccC----------CcHHhhhhc----------------------------cCCCCCHHHHHHHHHHHHHHhhhhcc
Confidence 9997764 333332221 13457888999999999999999999
Q ss_pred CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 625 ~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
++||||||||+|||++.++ .+||+|||+|+.+........ +...
T Consensus 127 ~~iiHrDlKp~NIll~~~~--~~Kl~DfG~a~~~~~~~~~~~----------------------------------~~~~ 170 (273)
T d1mp8a_ 127 KRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKA----------------------------------SKGK 170 (273)
T ss_dssp TTCCCSCCSGGGEEEEETT--EEEECC-----------------------------------------------------
T ss_pred cCeeccccchhheeecCCC--cEEEccchhheeccCCcceec----------------------------------ccee
Confidence 9999999999999997765 599999999987654322111 1146
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHcccCCC
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNP 782 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP 782 (934)
||+.|+|||++.+..++.++|||||||++|||+++|.+||...... .. .+........+...++++.+||.+||+.||
T Consensus 171 gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp 250 (273)
T d1mp8a_ 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 250 (273)
T ss_dssp CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 8999999999999999999999999999999999778888764333 22 333333344556678999999999999999
Q ss_pred CCCcCHHHHHcC
Q 002343 783 DLRPKAQNVLNH 794 (934)
Q Consensus 783 ~~RPTa~evL~H 794 (934)
++|||+.||++|
T Consensus 251 ~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 251 SRRPRFTELKAQ 262 (273)
T ss_dssp GGSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-45 Score=403.32 Aligned_cols=246 Identities=24% Similarity=0.282 Sum_probs=188.6
Q ss_pred eEEEeeeecccCcEEEEEEEE-ecCc----EEEEEEeecCC----hhHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Q 002343 474 LVVFNKEIAKGSNGTVVLEGN-YEGR----SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 474 ~~~~~~~IG~GsfGtVy~~~~-~~g~----~VAVK~l~~~~----~~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.|.+.+.||+|+||+||++.. .+|+ .||||++.... .+...+|+. +++.++|||||+++|++.+++ .++
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~-~~~ 87 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTST-VQL 87 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHH-HHHHCCCTTBCCEEEEEESSS-EEE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEecCC-eeE
Confidence 388899999999999999854 3443 68999886432 234566665 788899999999999998765 566
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
+||+|. ++|.+.+ .. ....+++.+++.++.||+.||+|||
T Consensus 88 v~e~~~~~~l~~~~-----------~~----------------------------~~~~~~~~~~~~i~~qi~~gl~yLH 128 (317)
T d1xkka_ 88 ITQLMPFGCLLDYV-----------RE----------------------------HKDNIGSQYLLNWCVQIAKGMNYLE 128 (317)
T ss_dssp EEECCTTCBHHHHH-----------HH----------------------------TSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCcccccc-----------cc----------------------------cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 667443 4444433 21 1345788899999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
++|||||||||+|||++.++ .+||+|||+|+.+......... ...
T Consensus 129 ~~~iiHrDlKp~NIll~~~~--~~kl~DFGla~~~~~~~~~~~~---------------------------------~~~ 173 (317)
T d1xkka_ 129 DRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHA---------------------------------EGG 173 (317)
T ss_dssp HTTCCCSCCCGGGEEEEETT--EEEECCCSHHHHTTTTCC----------------------------------------
T ss_pred HcCcccCcchhhcceeCCCC--CeEeeccccceecccccccccc---------------------------------ccc
Confidence 99999999999999997665 5999999999987654322111 114
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh-HHHHHHhhcc-cccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE-RDANIVKDRK-DLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||+.|||||++.++.|+.++|||||||++|||+|++.+||..... .....+.... ...+...++++.+||.+||+.|
T Consensus 174 ~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~d 253 (317)
T d1xkka_ 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 253 (317)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999999999988999876433 3334444333 3344556789999999999999
Q ss_pred CCCCcCHHHHHcCC
Q 002343 782 PDLRPKAQNVLNHP 795 (934)
Q Consensus 782 P~~RPTa~evL~HP 795 (934)
|++|||+.|+++|.
T Consensus 254 P~~RPs~~eil~~l 267 (317)
T d1xkka_ 254 ADSRPKFRELIIEF 267 (317)
T ss_dssp GGGSCCHHHHHHHH
T ss_pred hhhCcCHHHHHHHH
Confidence 99999999999883
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.6e-45 Score=394.74 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=187.5
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCC-
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQD- 540 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~- 540 (934)
..+.++|.+.+.||+|+||+||++.. .+|+.||||++.+... ....+|++ +++.++|||||++++++.+.+
T Consensus 3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-~l~~~~hpniv~~~~~~~~~~~ 81 (277)
T d1o6ya_ 3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ-NAAALNHPAIVAVYDTGEAETP 81 (277)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEEEEECS
T ss_pred cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHH-HHHhcCCCCCCcccceeeeccC
Confidence 34667899999999999999999854 6799999999975432 23456665 788999999999999987643
Q ss_pred ---eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 541 ---FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 541 ---~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
..|||||||++ +|.+++ . ....+++.+++.++.||+
T Consensus 82 ~~~~~~lvmE~~~g~~L~~~~-----------~-----------------------------~~~~l~~~~~~~i~~qi~ 121 (277)
T d1o6ya_ 82 AGPLPYIVMEYVDGVTLRDIV-----------H-----------------------------TEGPMTPKRAIEVIADAC 121 (277)
T ss_dssp SSEEEEEEEECCCEEEHHHHH-----------H-----------------------------HHCSCCHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCCEehhhh-----------c-----------------------------ccCCCCHHHHHHHHHHHH
Confidence 48999998774 343332 1 134678899999999999
Q ss_pred HHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccc
Q 002343 617 SGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFG 696 (934)
Q Consensus 617 ~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 696 (934)
.||+|||++|||||||||+|||++.++. .+|+|||+++...........
T Consensus 122 ~al~~lH~~~iiHrDiKP~NIll~~~~~--~~l~d~~~~~~~~~~~~~~~~----------------------------- 170 (277)
T d1o6ya_ 122 QALNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQ----------------------------- 170 (277)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETTSC--EEECCCTTCEECC-------------------------------------
T ss_pred HHHHHHHhCCccCccccCcccccCcccc--ceeehhhhhhhhccccccccc-----------------------------
Confidence 9999999999999999999999987765 899999999866543221111
Q ss_pred cceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH--HHHHhhcccc---cccCCCHHHH
Q 002343 697 VLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD--ANIVKDRKDL---FLVEHIPEAV 771 (934)
Q Consensus 697 ~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~--~~i~~~~~~~---~~~~~~~e~~ 771 (934)
....+||+.|||||++.+..++.++|||||||++|||+|| .+||....... ..++...... .....++++.
T Consensus 171 ---~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~ 246 (277)
T d1o6ya_ 171 ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG-EPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246 (277)
T ss_dssp -----------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHH
T ss_pred ---cccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhC-CCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHH
Confidence 1125799999999999999999999999999999999996 77886543322 2233332221 2245678999
Q ss_pred HHHHHcccCCCCCCc-CHHHHHcCCCC
Q 002343 772 DLFTRLLDPNPDLRP-KAQNVLNHPFF 797 (934)
Q Consensus 772 dLI~~~L~~DP~~RP-Ta~evL~HPff 797 (934)
+||.+||+.||++|| |+++++ |+|.
T Consensus 247 ~li~~~L~~dp~~R~~sa~~l~-~~l~ 272 (277)
T d1o6ya_ 247 AVVLKALAKNPENRYQTAAEMR-ADLV 272 (277)
T ss_dssp HHHHHHTCSSGGGSCSSHHHHH-HHHH
T ss_pred HHHHHHccCCHhHCHhHHHHHH-HHHH
Confidence 999999999999999 555554 5543
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=394.27 Aligned_cols=250 Identities=26% Similarity=0.362 Sum_probs=195.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVm 546 (934)
++|.+.++||+|+||+||++.. .+|+.||||++..... ....+|+. +++.++|||||++++++.+.+..++|+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~iv~ 80 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHH-HHHhcCcCCEEeeccccccccceeEEe
Confidence 4689999999999999999865 5789999999865432 34567776 788999999999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|.+.....+.. ....+++.+++.++.|++.||+|||++|
T Consensus 81 ~~~~~~~l~~~~~---------------------------------------~~~~~~~~~~~~~~~q~~~aL~~lH~~~ 121 (292)
T d1unla_ 81 EFCDQDLKKYFDS---------------------------------------CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121 (292)
T ss_dssp ECCSEEHHHHHHH---------------------------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeccccccccccc---------------------------------------cccccchhHHHHHHHHHHHHHHHhhcCC
Confidence 9887643322211 1345678889999999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
||||||||+|||++.++. +||+|||.|+.......... ...++
T Consensus 122 IvHrDiKP~NIli~~~~~--~kl~DFG~a~~~~~~~~~~~-----------------------------------~~~~~ 164 (292)
T d1unla_ 122 VLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPVRCYS-----------------------------------AEVVT 164 (292)
T ss_dssp EECCCCSGGGEEECTTCC--EEECCCTTCEECCSCCSCCC-----------------------------------SCCSC
T ss_pred EeeecccCcccccccCCc--eeeeecchhhcccCCCccce-----------------------------------eeccc
Confidence 999999999999976654 89999999987655332111 13578
Q ss_pred CccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHHhh-c-------------------------
Q 002343 707 SGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIVKD-R------------------------- 758 (934)
Q Consensus 707 ~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~~~-~------------------------- 758 (934)
+.|+|||++.+.. ++.++|||||||++|||++|+.|+|....... ...+.. .
T Consensus 165 ~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (292)
T d1unla_ 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA 244 (292)
T ss_dssp GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCT
T ss_pred cchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccc
Confidence 8999999998766 59999999999999999998777775443221 111110 0
Q ss_pred ---ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 759 ---KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 759 ---~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
........+++++|||.+||+.||++||||+|+|+||||.+
T Consensus 245 ~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~ 288 (292)
T d1unla_ 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred cchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence 00011234578999999999999999999999999999964
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.7e-45 Score=399.01 Aligned_cols=269 Identities=22% Similarity=0.265 Sum_probs=198.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||+||+|... +++.||||++..... +...+|+. +++.++||||+++++++.+.+..
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~ 91 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA-LMAEFDNPNIVKLLGVCAVGKPM 91 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHH-HHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHH-HHHhcCCCCcccceeeeccCCce
Confidence 46888999999999999998643 357899999975443 23456665 78999999999999999999999
Q ss_pred EEEEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
+++||+|. ++|.++++............... .............+++.+++.|+.||+.||+|
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y 155 (301)
T d1lufa_ 92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL----------------STRARVSSPGPPPLSCAEQLCIARQVAAGMAY 155 (301)
T ss_dssp EEEEECCTTCBHHHHHHHTCC--------------------------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCcHHHHHHhcCcccccccccccc----------------chhhhccccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 99999765 35665554332211111100000 00000011123568899999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++||||||||+|||++.+ ..+||+|||+|+.+........ .+
T Consensus 156 lH~~~ivHrDlKp~NILld~~--~~~Kl~DFGls~~~~~~~~~~~---------------------------------~~ 200 (301)
T d1lufa_ 156 LSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSADYYKA---------------------------------DG 200 (301)
T ss_dssp HHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTGGGCBC------------------------------------
T ss_pred cccCCeEeeEEcccceEECCC--CcEEEccchhheeccCCccccc---------------------------------cC
Confidence 999999999999999999655 4599999999987654322111 11
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhcc-cccccCCCHHHHHHHHHccc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDRK-DLFLVEHIPEAVDLFTRLLD 779 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~~-~~~~~~~~~e~~dLI~~~L~ 779 (934)
..+||+.|||||.+.+..|+.++|||||||++|||++|+.+||...... ....+.... ...+...++++.+||.+||+
T Consensus 201 ~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~ 280 (301)
T d1lufa_ 201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWS 280 (301)
T ss_dssp -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred CCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcC
Confidence 2568999999999999999999999999999999999888888765433 333333332 33344677899999999999
Q ss_pred CCCCCCcCHHHHHc
Q 002343 780 PNPDLRPKAQNVLN 793 (934)
Q Consensus 780 ~DP~~RPTa~evL~ 793 (934)
.||++|||+.||++
T Consensus 281 ~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 281 KLPADRPSFCSIHR 294 (301)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred CChhHCcCHHHHHH
Confidence 99999999999964
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-45 Score=392.86 Aligned_cols=243 Identities=26% Similarity=0.367 Sum_probs=187.2
Q ss_pred ceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEEeccc
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESD-QDFVYLSLERCT 550 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~yLVmE~c~ 550 (934)
+.|.+.+.||+|+||+||++.. .|+.||||++.+... +...+|+. +++.++|||||+++|++.+ .+.+|||||||+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~ 84 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEAS-VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 84 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHHHHTHH-HHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence 4577889999999999999754 789999999976554 34556665 8889999999999999855 567899999664
Q ss_pred CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 002343 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (934)
Q Consensus 551 ~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~gIVHR 630 (934)
+|+|.++|.... ...+++..++.++.||+.||+|||+++||||
T Consensus 85 ----------~g~L~~~l~~~~---------------------------~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~ 127 (262)
T d1byga_ 85 ----------KGSLVDYLRSRG---------------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 127 (262)
T ss_dssp ----------TEEHHHHHHHHH---------------------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ----------CCCHHHHHHhcC---------------------------CCCCCHHHHHHHHHHHHhhccccccCceecc
Confidence 445555443210 1236788899999999999999999999999
Q ss_pred CCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCCCccc
Q 002343 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGSSGWQ 710 (934)
Q Consensus 631 DLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT~~Y~ 710 (934)
||||+|||++.++. +||+|||+++....... ...||+.|+
T Consensus 128 dlkp~Nil~~~~~~--~kl~dfg~s~~~~~~~~--------------------------------------~~~~~~~y~ 167 (262)
T d1byga_ 128 DLAARNVLVSEDNV--AKVSDFGLTKEASSTQD--------------------------------------TGKLPVKWT 167 (262)
T ss_dssp CCSGGGEEECTTSC--EEECCCCC--------------------------------------------------CCTTTS
T ss_pred ccchHhheecCCCC--EeecccccceecCCCCc--------------------------------------cccccccCC
Confidence 99999999976654 89999999986543211 145889999
Q ss_pred cchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHHhhcccccccCCCHHHHHHHHHcccCCCCCCcCH
Q 002343 711 APEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKA 788 (934)
Q Consensus 711 APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa 788 (934)
|||++.++.++.++|||||||++|||+|++.+||...... .. .+........+...++++.+||.+||+.||++|||+
T Consensus 168 aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~ 247 (262)
T d1byga_ 168 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 247 (262)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCH
Confidence 9999999999999999999999999999778888764332 22 333334444556677999999999999999999999
Q ss_pred HHHHcC
Q 002343 789 QNVLNH 794 (934)
Q Consensus 789 ~evL~H 794 (934)
.+++++
T Consensus 248 ~~l~~~ 253 (262)
T d1byga_ 248 LQLREQ 253 (262)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=405.44 Aligned_cols=247 Identities=26% Similarity=0.389 Sum_probs=185.0
Q ss_pred ecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEec------
Q 002343 471 IGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESD------ 538 (934)
Q Consensus 471 i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~------ 538 (934)
+-++|.+.++||+|+||+||++.. .+|+.||||++.+... ..+.+|+. +++.++|||||++++++..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~~~~~f~~~~~~~~ 93 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEE 93 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHH-HHHhcCCCCeeEEEEEEeccccccc
Confidence 346799999999999999999854 5699999999975432 23556776 7888999999999999964
Q ss_pred CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHH
Q 002343 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSG 618 (934)
Q Consensus 539 ~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~g 618 (934)
.+.+|+|||||.+++.+.+ ...+++.+++.+++||+.|
T Consensus 94 ~~~~~iv~Ey~~~~l~~~~------------------------------------------~~~~~~~~i~~~~~qil~g 131 (355)
T d2b1pa1 94 FQDVYLVMELMDANLCQVI------------------------------------------QMELDHERMSYLLYQMLCG 131 (355)
T ss_dssp CCEEEEEEECCSEEHHHHH------------------------------------------TSCCCHHHHHHHHHHHHHH
T ss_pred CceeEEEEeccchHHHHhh------------------------------------------hcCCCHHHHHHHHHHHHHH
Confidence 4689999999987655433 2346788999999999999
Q ss_pred HHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 619 LSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 619 L~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
|+|||++||+||||||+|||++.++. +|++|||+++.......
T Consensus 132 l~~LH~~giiHrDlKP~Nil~~~~~~--~kl~df~~~~~~~~~~~----------------------------------- 174 (355)
T d2b1pa1 132 IKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFM----------------------------------- 174 (355)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTTCC--EEECCCCC--------------------------------------------
T ss_pred HHHhhhcccccccCCccccccccccc--eeeechhhhhccccccc-----------------------------------
Confidence 99999999999999999999977654 89999999886543221
Q ss_pred eeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH-HHH---------------------
Q 002343 699 FFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA-NIV--------------------- 755 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~-~i~--------------------- 755 (934)
.+..+||+.|+|||++.+..++.++||||+||++|+|++| .+||...... .. .++
T Consensus 175 -~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g-~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 252 (355)
T d2b1pa1 175 -MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252 (355)
T ss_dssp -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHH
T ss_pred -cccccccccccChhhhcCCCCCCCcccccccchHHHHhhC-CCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHH
Confidence 1125699999999999999999999999999999999997 6777533211 11 111
Q ss_pred -hhcccc--------c-----------ccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCC
Q 002343 756 -KDRKDL--------F-----------LVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 799 (934)
Q Consensus 756 -~~~~~~--------~-----------~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~ 799 (934)
...... . ....+++++|||.+||+.||++||||+|+|+||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~ 316 (355)
T d2b1pa1 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316 (355)
T ss_dssp HHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred hhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 000000 0 0012357899999999999999999999999999964
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=392.65 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=192.8
Q ss_pred ceEEEeeeecccCcEEEEEEEEec--------CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEecCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE--------GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~--------g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~ 540 (934)
+.|.+.+.||+|+||+||++.... +..||||++.+... ....+|+..+.+..+|||||++++++.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 568889999999999999985422 34799999976543 234556665556669999999999999999
Q ss_pred eEEEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGL 619 (934)
Q Consensus 541 ~~yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL 619 (934)
.+|+|||||.+ +|.+++.. ........ ...........+++.+++.++.||+.||
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~-----------~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~qi~~al 148 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQA-----------RRPPGLEY-------------SYNPSHNPEEQLSSKDLVSCAYQVARGM 148 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHT-----------TSCC-------------------------CCCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEccCCCcHHHHHHh-----------hcCCcccc-------------ccccccCccccCCHHHHHHHHHHHHHHH
Confidence 99999997663 45554432 21110000 0000011245689999999999999999
Q ss_pred HHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccce
Q 002343 620 SHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLF 699 (934)
Q Consensus 620 ~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 699 (934)
+|||+++||||||||+|||++.++ .+||+|||+++...........
T Consensus 149 ~ylH~~~ivHrDiKp~NiLl~~~~--~~kl~dfg~~~~~~~~~~~~~~-------------------------------- 194 (299)
T d1fgka_ 149 EYLASKKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKKT-------------------------------- 194 (299)
T ss_dssp HHHHHTTCCCSCCSGGGEEECTTC--CEEECSTTCCCCGGGCCTTCCC--------------------------------
T ss_pred HHhhhCCEEeeeecccceeecCCC--CeEeccchhhcccccccccccc--------------------------------
Confidence 999999999999999999997665 4899999999977654322111
Q ss_pred eecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHHHHhhc-ccccccCCCHHHHHHHHHc
Q 002343 700 FTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DANIVKDR-KDLFLVEHIPEAVDLFTRL 777 (934)
Q Consensus 700 ~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~i~~~~-~~~~~~~~~~e~~dLI~~~ 777 (934)
....||+.|+|||.+.++.|+.++|||||||++|||++++.+||...... ....+... ....+...++++.+||.+|
T Consensus 195 -~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 273 (299)
T d1fgka_ 195 -TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 273 (299)
T ss_dssp -TTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHH
T ss_pred -ccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence 11468999999999999999999999999999999999888888765433 33333333 3334455678999999999
Q ss_pred ccCCCCCCcCHHHHHc
Q 002343 778 LDPNPDLRPKAQNVLN 793 (934)
Q Consensus 778 L~~DP~~RPTa~evL~ 793 (934)
|+.||++|||+.||++
T Consensus 274 l~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 274 WHAVPSQRPTFKQLVE 289 (299)
T ss_dssp TCSSGGGSCCHHHHHH
T ss_pred ccCCHhHCcCHHHHHH
Confidence 9999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=395.78 Aligned_cols=259 Identities=24% Similarity=0.328 Sum_probs=194.0
Q ss_pred ceEEEeeeecccCcEEEEEEEEe-cCc--EEEEEEeecCCh----hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY-EGR--SVAVKRLVKTHH----DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~-~g~--~VAVK~l~~~~~----~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yL 544 (934)
+.|.+.++||+|+||+||++... +|. .||||++..... +...+|+. ++..+ +|||||+++|++.+++.+|+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~~HpnIv~~~~~~~~~~~~~i 88 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE-VLCKLGHHPNIINLLGACEHRGYLYL 88 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHH-HHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHH-HHHhccCCCCEeeEEEEEecCCeeEE
Confidence 35677889999999999998554 444 588898864322 34567776 66666 79999999999999999999
Q ss_pred EEeccc-CChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHH
Q 002343 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLH 623 (934)
Q Consensus 545 VmE~c~-~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLH 623 (934)
|||||+ ++|.+++ +.......... ..........+++.+++.++.||+.||.|||
T Consensus 89 V~ey~~~g~L~~~l-----------~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH 144 (309)
T d1fvra_ 89 AIEYAPHGNLLDFL-----------RKSRVLETDPA-------------FAIANSTASTLSSQQLLHFAADVARGMDYLS 144 (309)
T ss_dssp EECCCTTCBHHHHH-----------HTTCHHHHCHH-------------HHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHH-----------hhccccccchh-------------hhccccccCCCCHHHHHHHHHHHHHHHHhhh
Confidence 999766 3455544 32211000000 0001112456899999999999999999999
Q ss_pred HCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 624 EIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 624 s~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
+++||||||||+|||++.++ .+||+|||+|+........ ...
T Consensus 145 ~~~iiHrDlkp~NIL~~~~~--~~kl~DfG~a~~~~~~~~~------------------------------------~~~ 186 (309)
T d1fvra_ 145 QKQFIHRDLAARNILVGENY--VAKIADFGLSRGQEVYVKK------------------------------------TMG 186 (309)
T ss_dssp HTTEECSCCSGGGEEECGGG--CEEECCTTCEESSCEECCC---------------------------------------
T ss_pred cCCccccccccceEEEcCCC--ceEEccccccccccccccc------------------------------------cce
Confidence 99999999999999996654 5999999999865432211 014
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHcccCC
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDPN 781 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~D 781 (934)
.||..|+|||.+.++.++.++|||||||++|||++|+.+||....... ...+ .......+...++++++||.+||+.|
T Consensus 187 ~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d 266 (309)
T d1fvra_ 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 266 (309)
T ss_dssp -CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCC
Confidence 589999999999999999999999999999999998888886544332 3333 33333344556789999999999999
Q ss_pred CCCCcCHHHHHcC
Q 002343 782 PDLRPKAQNVLNH 794 (934)
Q Consensus 782 P~~RPTa~evL~H 794 (934)
|++|||++||++|
T Consensus 267 P~~RPs~~eil~~ 279 (309)
T d1fvra_ 267 PYERPSFAQILVS 279 (309)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999986
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-44 Score=387.36 Aligned_cols=246 Identities=23% Similarity=0.273 Sum_probs=181.7
Q ss_pred ceEEEeeeecccCcEEEEEEEEec--C--cEEEEEEeecCCh------hHHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNYE--G--RSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~~--g--~~VAVK~l~~~~~------~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||+||++.... + ..||||++.+... +...+|+. +++.++|||||+++|++.++ ..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~-~l~~l~H~nIv~~~g~~~~~-~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN-AMHSLDHRNLIRLYGVVLTP-PM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHH-HHHHCCCTTBCCEEEEECSS-SC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHH-HHHhCCCCCEEEEEEEEeec-ch
Confidence 458889999999999999985432 2 4799999865321 24466764 88899999999999999764 67
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|+|||||.+ ++.+++ .. ....+++..++.++.||+.||+|
T Consensus 86 ~lv~e~~~~~~l~~~~-----------~~----------------------------~~~~l~~~~~~~~~~qi~~gl~y 126 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRL-----------RK----------------------------HQGHFLLGTLSRYAVQVAEGMGY 126 (273)
T ss_dssp EEEEECCTTCBHHHHH-----------HH----------------------------HGGGSCHHHHHHHHHHHHHHHHH
T ss_pred heeeeeecCcchhhhh-----------hc----------------------------ccCCCCHHHHHHHHHHHHHHHHH
Confidence 899997763 444333 21 12346888999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||++||+||||||+|||++.++ .+||+|||+|+.+.......... +
T Consensus 127 lH~~~iiHrDikp~NIll~~~~--~vkl~DfGl~~~~~~~~~~~~~~--------------------------------~ 172 (273)
T d1u46a_ 127 LESKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQNDDHYVMQ--------------------------------E 172 (273)
T ss_dssp HHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC-CCEEEC----------------------------------
T ss_pred hhhCCEeeeeecHHHhcccccc--ceeeccchhhhhcccCCCcceec--------------------------------C
Confidence 9999999999999999998765 59999999999876543322111 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HHH-HHhhccc-ccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DAN-IVKDRKD-LFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~~-i~~~~~~-~~~~~~~~e~~dLI~~~L 778 (934)
...||..|+|||++.+..++.++|||||||++|||+|+|.+||...... ... +...... ..+...++++.+||.+||
T Consensus 173 ~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl 252 (273)
T d1u46a_ 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 252 (273)
T ss_dssp ---CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHT
T ss_pred ccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHc
Confidence 1458899999999999999999999999999999999668888654333 222 3333222 223456789999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
+.||++|||++||++
T Consensus 253 ~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 253 AHKPEDRPTFVALRD 267 (273)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred CCChhHCcCHHHHHH
Confidence 999999999999863
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=392.97 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=195.4
Q ss_pred ceEEEeeeecccCcEEEEEEEE----ecCcEEEEEEeecCC-------hhHHHHHHHHHHHhCCC-CceeEEEEEEecCC
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTH-------HDVALKEIQNLIASDQH-PNIVRWYGVESDQD 540 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~----~~g~~VAVK~l~~~~-------~~~~~~Ei~~ll~~l~H-pNIV~l~g~~~~~~ 540 (934)
+.|.+.+.||+|+||+||++.. .+|+.||||++.+.. .+...+|+. +++.++| |||+++++++.+.+
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~-il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ-VLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHH-HHHHHHTCTTBCCEEEEEEETT
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHH-HHHhccCCCeEEEeeeeeccCC
Confidence 4589999999999999999854 358899999985432 234567776 5555545 89999999999999
Q ss_pred eEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHH
Q 002343 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (934)
Q Consensus 541 ~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~ 620 (934)
..|++||||. +|+|.+++.. ...+++..++.++.||+.||+
T Consensus 103 ~~~~v~e~~~----------~~~L~~~i~~-----------------------------~~~~~e~~~~~~~~Qi~~al~ 143 (322)
T d1vzoa_ 103 KLHLILDYIN----------GGELFTHLSQ-----------------------------RERFTEHEVQIYVGEIVLALE 143 (322)
T ss_dssp EEEEEECCCC----------SCBHHHHHHH-----------------------------HSCCCHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeccc----------ccHHHHHHHh-----------------------------cccccHHHHHHHHHHHHHHHH
Confidence 9999999665 4444444332 345678889999999999999
Q ss_pred HHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccccee
Q 002343 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFF 700 (934)
Q Consensus 621 yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 700 (934)
|||++|||||||||+|||++.++ .+||+|||+|+.+........
T Consensus 144 ~lH~~~ivHrDiKp~Nill~~~~--~vkL~DFG~a~~~~~~~~~~~---------------------------------- 187 (322)
T d1vzoa_ 144 HLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERA---------------------------------- 187 (322)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECCGGGGGGG----------------------------------
T ss_pred HhhcCCEEeccCCccceeecCCC--CEEEeeccchhhhcccccccc----------------------------------
Confidence 99999999999999999997765 499999999987654322111
Q ss_pred ecCCCCCccccchhcccCC--CcccccccchhhhhHHhhcCCCCCCCCch-h----HHHHHHhhcccccccCCCHHHHHH
Q 002343 701 TVGYGSSGWQAPEQLLQGR--QTRAIDLFSLGCILFFCITGGKHPYGESF-E----RDANIVKDRKDLFLVEHIPEAVDL 773 (934)
Q Consensus 701 t~~~GT~~Y~APE~l~~~~--~t~ksDIWSLGvILyeLltGg~~Pf~~~~-~----~~~~i~~~~~~~~~~~~~~e~~dL 773 (934)
....||+.|+|||.+.+.. ++.++|||||||+||+|++| .+||.... . .............+...++++++|
T Consensus 188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG-~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 266 (322)
T d1vzoa_ 188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG-ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDL 266 (322)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHS-SCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHH
Confidence 1146999999999997653 68899999999999999996 66774322 1 122222233334445678999999
Q ss_pred HHHcccCCCCCCc-----CHHHHHcCCCCCCccc
Q 002343 774 FTRLLDPNPDLRP-----KAQNVLNHPFFWTADT 802 (934)
Q Consensus 774 I~~~L~~DP~~RP-----Ta~evL~HPff~~~~~ 802 (934)
|.+||++||++|| |++|+++||||...++
T Consensus 267 i~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~ 300 (322)
T d1vzoa_ 267 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 300 (322)
T ss_dssp HHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred HHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCH
Confidence 9999999999999 5899999999976554
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-44 Score=391.37 Aligned_cols=256 Identities=20% Similarity=0.274 Sum_probs=197.5
Q ss_pred ceEEEeeeecccCcEEEEEEEEe------cCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~~------~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||+||+|... +++.||||++.+.... ...+|+. +++.++|||||++++++..++..
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~~~~~~~~~~~~ 98 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS-VMKEFNCHHVVRLLGVVSQGQPT 98 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHH-HGGGCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHH-HHHHcCCCCEeeeeeEEecCCce
Confidence 56788999999999999998442 3678999999754432 2456665 78899999999999999999999
Q ss_pred EEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (934)
Q Consensus 543 yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yL 622 (934)
++|||||. +|+|.+++....... ...-....+++.++..++.||++||+||
T Consensus 99 ~lv~e~~~----------~g~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~ia~gl~~L 149 (308)
T d1p4oa_ 99 LVIMELMT----------RGDLKSYLRSLRPAM-------------------ANNPVLAPPSLSKMIQMAGEIADGMAYL 149 (308)
T ss_dssp EEEEECCT----------TCBHHHHHHHHHHHH-------------------HHCTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeecC----------CCCHHHHHHhccccc-------------------ccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999665 344444443221100 0000123467889999999999999999
Q ss_pred HHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeec
Q 002343 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTV 702 (934)
Q Consensus 623 Hs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~ 702 (934)
|+++||||||||+|||++.++ ++||+|||+|+.+......... +.
T Consensus 150 H~~~ivHrDlk~~NiLld~~~--~~Kl~DFGla~~~~~~~~~~~~---------------------------------~~ 194 (308)
T d1p4oa_ 150 NANKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYRKG---------------------------------GK 194 (308)
T ss_dssp HHTTCBCSCCSGGGEEECTTC--CEEECCTTCCCGGGGGGCEEGG---------------------------------GS
T ss_pred hhCCeeeceEcCCceeecCCc--eEEEeecccceeccCCcceeec---------------------------------cc
Confidence 999999999999999996554 5999999999877554322111 11
Q ss_pred CCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhHH-HHHH-hhcccccccCCCHHHHHHHHHcccC
Q 002343 703 GYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFERD-ANIV-KDRKDLFLVEHIPEAVDLFTRLLDP 780 (934)
Q Consensus 703 ~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~~-~~i~-~~~~~~~~~~~~~e~~dLI~~~L~~ 780 (934)
..||+.|+|||.+.+..++.++|||||||++|||+||+.+||....... ...+ .......+...++++.+||.+||+.
T Consensus 195 ~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 274 (308)
T d1p4oa_ 195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQY 274 (308)
T ss_dssp SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred eecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999999888987654332 3333 3333333456678999999999999
Q ss_pred CCCCCcCHHHHHc
Q 002343 781 NPDLRPKAQNVLN 793 (934)
Q Consensus 781 DP~~RPTa~evL~ 793 (934)
||++|||+++|++
T Consensus 275 ~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 275 NPKMRPSFLEIIS 287 (308)
T ss_dssp SGGGSCCHHHHHH
T ss_pred ChhHCcCHHHHHH
Confidence 9999999999997
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=389.63 Aligned_cols=247 Identities=20% Similarity=0.304 Sum_probs=189.0
Q ss_pred EEeeeecccCcEEEEEEEEec----CcEEEEEEeecCCh----hHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEE
Q 002343 476 VFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESD-QDFVYLSL 546 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~----g~~VAVK~l~~~~~----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~-~~~~yLVm 546 (934)
.+.++||+|+||+||++.... ...||||++.+... +...+|+. +++.++|||||+++|++.+ ++..|+||
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 108 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVL 108 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHH-HHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHH-HHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence 346789999999999986533 23699999965332 23456665 8899999999999999765 56899999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|||++ |+|.+++... ...+++.+++.++.||+.||.|||+.+
T Consensus 109 E~~~~----------g~l~~~~~~~----------------------------~~~~~~~~~~~i~~qia~gL~~lH~~~ 150 (311)
T d1r0pa_ 109 PYMKH----------GDLRNFIRNE----------------------------THNPTVKDLIGFGLQVAKGMKFLASKK 150 (311)
T ss_dssp ECCTT----------CBHHHHHHCT----------------------------TCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeec----------Cchhhhhccc----------------------------cccchHHHHHHHHHHHHHhhhhhcccC
Confidence 97764 3444433221 233456778899999999999999999
Q ss_pred CcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCCCC
Q 002343 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGYGS 706 (934)
Q Consensus 627 IVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~GT 706 (934)
|+||||||+||||+.++ .+||+|||+++.+............ ...||
T Consensus 151 iiHrDLK~~NILl~~~~--~~kL~DFG~~~~~~~~~~~~~~~~~-------------------------------~~~gt 197 (311)
T d1r0pa_ 151 FVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKT-------------------------------GAKLP 197 (311)
T ss_dssp CCCSCCSGGGEEECTTC--CEEECSSGGGCCTTTTTCCCTTCTT-------------------------------CSSCC
T ss_pred cccCCccHHhEeECCCC--CEEEecccchhhccccccccceecc-------------------------------ccccc
Confidence 99999999999996554 5999999999987654332211111 14689
Q ss_pred CccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH--HHHHHhhcccccccCCCHHHHHHHHHcccCCCCC
Q 002343 707 SGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER--DANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDL 784 (934)
Q Consensus 707 ~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~--~~~i~~~~~~~~~~~~~~e~~dLI~~~L~~DP~~ 784 (934)
+.|+|||.+.++.++.++|||||||++|||+||+.+|+...... ...+........+...++++.+||.+||+.||++
T Consensus 198 ~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~ 277 (311)
T d1r0pa_ 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 277 (311)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred ccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhH
Confidence 99999999999999999999999999999999877776654322 2233444444455566789999999999999999
Q ss_pred CcCHHHHHcC
Q 002343 785 RPKAQNVLNH 794 (934)
Q Consensus 785 RPTa~evL~H 794 (934)
||++.||++|
T Consensus 278 RPs~~ei~~~ 287 (311)
T d1r0pa_ 278 RPSFSELVSR 287 (311)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999986
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-44 Score=399.71 Aligned_cols=248 Identities=25% Similarity=0.393 Sum_probs=187.8
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-----hHHHHHHHHHHHhCCCCceeEEEEEEecC----
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ---- 539 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-----~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~---- 539 (934)
.+.++|.+.+.||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.++|||||++++++...
T Consensus 15 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~-il~~l~h~~iv~~~~~~~~~~~~~ 93 (348)
T d2gfsa1 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-LLKHMKHENVIGLLDVFTPARSLE 93 (348)
T ss_dssp EEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHH-HHHHCCCTTBCCCSEEECSCSSTT
T ss_pred cCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHH-HHHhcCCCCeeeEEEEEeeccccc
Confidence 3567799999999999999999854 6799999999975432 24567776 78889999999999998643
Q ss_pred --CeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHH
Q 002343 540 --DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVS 617 (934)
Q Consensus 540 --~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~ 617 (934)
+..|+++++++++|.+++. .+++++.+++.+++||+.
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~~-----------------------------------------~~~l~e~~~~~i~~qil~ 132 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIVK-----------------------------------------CQKLTDDHVQFLIYQILR 132 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHHT-----------------------------------------TCCCCHHHHHHHHHHHHH
T ss_pred cCceEEEEEeecCCchhhhcc-----------------------------------------cccccHHHHHHHHHHHHH
Confidence 3456666655556655541 345788999999999999
Q ss_pred HHHHHHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcccccccc
Q 002343 618 GLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGV 697 (934)
Q Consensus 618 gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 697 (934)
||+|||++|||||||||+|||++.++. +|++|||+|.......
T Consensus 133 aL~~LH~~giiHrDiKp~NILi~~~~~--~kl~dfg~a~~~~~~~----------------------------------- 175 (348)
T d2gfsa1 133 GLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTDDEM----------------------------------- 175 (348)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCC----CCTGGG-----------------------------------
T ss_pred HHHHHHhCCCcccccCCcccccccccc--ccccccchhcccCccc-----------------------------------
Confidence 999999999999999999999977654 8999999997543211
Q ss_pred ceeecCCCCCccccchhcccCC-CcccccccchhhhhHHhhcCCCCCCCCchh-HHHH-HHhhccc--------------
Q 002343 698 LFFTVGYGSSGWQAPEQLLQGR-QTRAIDLFSLGCILFFCITGGKHPYGESFE-RDAN-IVKDRKD-------------- 760 (934)
Q Consensus 698 ~~~t~~~GT~~Y~APE~l~~~~-~t~ksDIWSLGvILyeLltGg~~Pf~~~~~-~~~~-i~~~~~~-------------- 760 (934)
....||+.|+|||++.+.. ++.++|||||||++|+|++| .+||..... .... +......
T Consensus 176 ---~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g-~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 176 ---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp ---SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred ---ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhC-CCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 1146899999999987765 58999999999999999996 667654322 1111 1111000
Q ss_pred ----------------ccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 761 ----------------LFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 761 ----------------~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
......+++++|||.+||+.||++||||+|+|+||||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence 0012356899999999999999999999999999999753
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-43 Score=388.16 Aligned_cols=264 Identities=22% Similarity=0.296 Sum_probs=196.7
Q ss_pred ceEEEeeeecccCcEEEEEEEE------ecCcEEEEEEeecCChh----HHHHHHHHHHHhCCCCceeEEEEEEecCCeE
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTHHD----VALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~------~~g~~VAVK~l~~~~~~----~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~ 542 (934)
+.|.+.+.||+|+||+||++.. .+++.||||++...... ...+|+..+.+..+|||||++++++.+.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 5788899999999999999854 24578999999765432 3455666444444899999999999999999
Q ss_pred EEEEecccC-ChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHH
Q 002343 543 YLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (934)
Q Consensus 543 yLVmE~c~~-sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~y 621 (934)
|||||||++ +|.+++.. ........... ..........+++.+++.++.||+.||+|
T Consensus 103 ~lvmE~~~~g~l~~~l~~-----------~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~qi~~gl~~ 160 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRR-----------KRDSFICSKTS-----------PAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (311)
T ss_dssp EEEEECCTTEEHHHHHHH-----------TTTTC-------------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHh-----------ccccccccccc-----------cccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 999997764 45555432 21110000000 00001123568899999999999999999
Q ss_pred HHHCCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceee
Q 002343 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFT 701 (934)
Q Consensus 622 LHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t 701 (934)
||+++||||||||+|||++.++ .+||+|||+++........... +
T Consensus 161 LH~~~ivHrDLKp~NIl~~~~~--~~ki~DfG~~~~~~~~~~~~~~---------------------------------~ 205 (311)
T d1t46a_ 161 LASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYVVK---------------------------------G 205 (311)
T ss_dssp HHHTTCCCSCCSGGGEEEETTT--EEEECCCGGGSCTTSCTTSEEC---------------------------------S
T ss_pred HHhCCeeecccccccccccccC--cccccccchheeccCCCcceEe---------------------------------e
Confidence 9999999999999999997665 5899999999977553322111 1
Q ss_pred cCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--HHHHHHhhcc-cccccCCCHHHHHHHHHcc
Q 002343 702 VGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--RDANIVKDRK-DLFLVEHIPEAVDLFTRLL 778 (934)
Q Consensus 702 ~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--~~~~i~~~~~-~~~~~~~~~e~~dLI~~~L 778 (934)
..+||+.|+|||++.++.++.++|||||||++|||+|++.+||..... ....++.... ...+...++++.+||.+||
T Consensus 206 ~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl 285 (311)
T d1t46a_ 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW 285 (311)
T ss_dssp SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred ecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHc
Confidence 256899999999999999999999999999999999988888865432 2334444333 3334456789999999999
Q ss_pred cCCCCCCcCHHHHHc
Q 002343 779 DPNPDLRPKAQNVLN 793 (934)
Q Consensus 779 ~~DP~~RPTa~evL~ 793 (934)
+.||++|||+++|++
T Consensus 286 ~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 286 DADPLKRPTFKQIVQ 300 (311)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred CCChhHCcCHHHHHH
Confidence 999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.3e-43 Score=381.51 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=194.7
Q ss_pred eeecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCc-eeEEEEEEecCCeEEEE
Q 002343 469 RRIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASDQHPN-IVRWYGVESDQDFVYLS 545 (934)
Q Consensus 469 ~~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpN-IV~l~g~~~~~~~~yLV 545 (934)
.++|++|.+.+.||+|+||+||++.. .+|+.||||++..... +...+|++ +++.++|+| |+.+.+++.+.+..|+|
T Consensus 3 ~~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~-i~~~l~~~~~i~~~~~~~~~~~~~~iv 81 (299)
T d1ckia_ 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESK-IYKMMQGGVGIPTIRWCGAEGDYNVMV 81 (299)
T ss_dssp CEETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHH-HHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred CeECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHH-HHHHccCCCcccEEEEEEecCCEEEEE
Confidence 46888999999999999999999854 5689999999875433 34556665 667776555 66667777889999999
Q ss_pred EecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHC
Q 002343 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEI 625 (934)
Q Consensus 546 mE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~ 625 (934)
||||+++|.+.+.. ....+++.+++.++.||+.||+|||++
T Consensus 82 me~~~~~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~ 122 (299)
T d1ckia_ 82 MELLGPSLEDLFNF---------------------------------------CSRKFSLKTVLLLADQMISRIEYIHSK 122 (299)
T ss_dssp EECCCCBHHHHHHH---------------------------------------TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCchhhhhhh---------------------------------------ccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 99998877655421 134578889999999999999999999
Q ss_pred CCcccCCCCCeEEEec-CCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecCC
Q 002343 626 GLIHRDLKPQNVLISK-DKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVGY 704 (934)
Q Consensus 626 gIVHRDLKP~NILl~~-d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~~ 704 (934)
|||||||||+|||++. +....+||+|||+|+.+............ ..+..+
T Consensus 123 ~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~----------------------------~~~~~~ 174 (299)
T d1ckia_ 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR----------------------------ENKNLT 174 (299)
T ss_dssp TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCC----------------------------BCCSCC
T ss_pred CeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceecc----------------------------ccCCcC
Confidence 9999999999999863 23456999999999987654332211110 012257
Q ss_pred CCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchhH-HH----HHHh----hcccccccCCCHHHHHHHH
Q 002343 705 GSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFER-DA----NIVK----DRKDLFLVEHIPEAVDLFT 775 (934)
Q Consensus 705 GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~~-~~----~i~~----~~~~~~~~~~~~e~~dLI~ 775 (934)
||+.|||||++.+..++.++|||||||++|||++| .+||...... .. .... ..........++++.+||.
T Consensus 175 gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~ 253 (299)
T d1ckia_ 175 GTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG-SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLN 253 (299)
T ss_dssp CCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHS-SCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred CCccccCHHHHhCCCCCChhhEEecCHHHHHHHhC-CCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHH
Confidence 99999999999999999999999999999999996 6677542211 11 1111 1111123356789999999
Q ss_pred HcccCCCCCCcCHHHH---HcCCC
Q 002343 776 RLLDPNPDLRPKAQNV---LNHPF 796 (934)
Q Consensus 776 ~~L~~DP~~RPTa~ev---L~HPf 796 (934)
+||+.||++||+++++ |+|+|
T Consensus 254 ~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 254 FCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp HHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHH
Confidence 9999999999998755 55554
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-43 Score=383.55 Aligned_cols=248 Identities=21% Similarity=0.302 Sum_probs=182.1
Q ss_pred cceEEEeeeecccCcEEEEEEEEecCcEEEEEEeecCChhHHHHHHHH-HHHhCCCCceeEEEEEEecCC----eEEEEE
Q 002343 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-LIASDQHPNIVRWYGVESDQD----FVYLSL 546 (934)
Q Consensus 472 ~~~~~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~-ll~~l~HpNIV~l~g~~~~~~----~~yLVm 546 (934)
.+.|.+.+.||+|+||+||++. .+|+.||||++.........+|... .+..++|||||++++++.+.+ .+||||
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~-~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEE-ETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEE-ECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 4568889999999999999975 6899999999976655555555431 334679999999999998654 689999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHH--
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE-- 624 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs-- 624 (934)
||| .+|+|.++|+ ..++++.+++.++.|++.||+|||+
T Consensus 81 Ey~----------~~g~L~~~l~------------------------------~~~l~~~~~~~~~~~ia~gl~~lH~~~ 120 (303)
T d1vjya_ 81 DYH----------EHGSLFDYLN------------------------------RYTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp ECC----------TTCBHHHHHH------------------------------HCCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred ecc----------cCCCHHHHHh------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 955 4455555553 2346788889999999999999996
Q ss_pred ------CCCcccCCCCCeEEEecCCCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccc
Q 002343 625 ------IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVL 698 (934)
Q Consensus 625 ------~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 698 (934)
+|||||||||+||||+.++ .+||+|||+|+............
T Consensus 121 ~~~~~~~~IvHrDlKp~NILl~~~~--~~Kl~DFGl~~~~~~~~~~~~~~------------------------------ 168 (303)
T d1vjya_ 121 VGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSATDTIDIA------------------------------ 168 (303)
T ss_dssp CSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETTTTEECC-------------------------------
T ss_pred hhhccCCCeeccccCccceEEcCCC--CeEEEecCccccccCCCcceecc------------------------------
Confidence 5999999999999996655 59999999999876543221111
Q ss_pred eeecCCCCCccccchhcccC------CCcccccccchhhhhHHhhcCCCCCCCCc----------------hhHHHHHHh
Q 002343 699 FFTVGYGSSGWQAPEQLLQG------RQTRAIDLFSLGCILFFCITGGKHPYGES----------------FERDANIVK 756 (934)
Q Consensus 699 ~~t~~~GT~~Y~APE~l~~~------~~t~ksDIWSLGvILyeLltGg~~Pf~~~----------------~~~~~~i~~ 756 (934)
....+||+.|||||++.+. .++.++|||||||+||||+|| .+|++.. .........
T Consensus 169 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (303)
T d1vjya_ 169 -PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR-CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246 (303)
T ss_dssp ----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT-BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT
T ss_pred -ccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhC-CCCCCcccccccchhhcccccchHHHHHHHHh
Confidence 1125799999999998764 267899999999999999997 4444221 111112221
Q ss_pred hccc-cc-c-----cCCCHHHHHHHHHcccCCCCCCcCHHHHHcC
Q 002343 757 DRKD-LF-L-----VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNH 794 (934)
Q Consensus 757 ~~~~-~~-~-----~~~~~e~~dLI~~~L~~DP~~RPTa~evL~H 794 (934)
.... .. + .+...++.+|+.+||+.||++|||+.||+++
T Consensus 247 ~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred ccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 1110 01 1 1112368899999999999999999999863
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.4e-41 Score=369.21 Aligned_cols=254 Identities=17% Similarity=0.195 Sum_probs=193.2
Q ss_pred eecceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh-hHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEE
Q 002343 470 RIGKLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH-DVALKEIQNLIASD-QHPNIVRWYGVESDQDFVYLSL 546 (934)
Q Consensus 470 ~i~~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l-~HpNIV~l~g~~~~~~~~yLVm 546 (934)
.+|++|.+.+.||+|+||+||++.. .+|+.||||++..... ....+|+. .++.+ +|+||+.+++++.++...|+||
T Consensus 2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~-~~~~l~~~~~i~~~~~~~~~~~~~~~vm 80 (293)
T d1csna_ 2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYR-TYKLLAGCTGIPNVYYFGQEGLHNVLVI 80 (293)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHH-HHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHH-HHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence 4688999999999999999999864 5689999999865443 33455665 44555 4599999999999999999999
Q ss_pred ecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 002343 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (934)
Q Consensus 547 E~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa~gL~yLHs~g 626 (934)
|+|+++|.+++... ...++..++..++.|++.||+|||++|
T Consensus 81 e~~~~~l~~~~~~~---------------------------------------~~~~~~~~~~~i~~q~~~~l~~lH~~g 121 (293)
T d1csna_ 81 DLLGPSLEDLLDLC---------------------------------------GRKFSVKTVAMAAKQMLARVQSIHEKS 121 (293)
T ss_dssp ECCCCBHHHHHHHT---------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EecCCCHHHHHHhh---------------------------------------ccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence 99988877765321 234678889999999999999999999
Q ss_pred CcccCCCCCeEEEecC---CCceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhccccccccceeecC
Q 002343 627 LIHRDLKPQNVLISKD---KSFCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICECVFQFGVLFFTVG 703 (934)
Q Consensus 627 IVHRDLKP~NILl~~d---~~~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~~ 703 (934)
||||||||+|||++.+ ....+||+|||+|+.+............ .....
T Consensus 122 iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~----------------------------~~~~~ 173 (293)
T d1csna_ 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR----------------------------EKKNL 173 (293)
T ss_dssp EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCC----------------------------CCCCC
T ss_pred ceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeec----------------------------ccCce
Confidence 9999999999999642 1235999999999987654322111100 01225
Q ss_pred CCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCch----h-HHHHHHhhccc----ccccCCCHHHHHHH
Q 002343 704 YGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESF----E-RDANIVKDRKD----LFLVEHIPEAVDLF 774 (934)
Q Consensus 704 ~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~----~-~~~~i~~~~~~----~~~~~~~~e~~dLI 774 (934)
+||+.|||||++.+..++.++|||||||++|||++| .+||.... . ....+...... ......++++.+++
T Consensus 174 ~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii 252 (293)
T d1csna_ 174 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG-SLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYM 252 (293)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred EEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhC-CCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHH
Confidence 799999999999999999999999999999999996 67775321 1 11111111111 11234568999999
Q ss_pred HHcccCCCCCCcCHHHHH
Q 002343 775 TRLLDPNPDLRPKAQNVL 792 (934)
Q Consensus 775 ~~~L~~DP~~RPTa~evL 792 (934)
..|+..+|++||+.+.+.
T Consensus 253 ~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 253 HYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHCCTTCCCCHHHHH
T ss_pred HHHhcCCcccCcCHHHHH
Confidence 999999999999987664
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-39 Score=363.56 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=183.3
Q ss_pred ceEEEeeeecccCcEEEEEEEE-ecCcEEEEEEeecCCh--hHHHHHHHHHHHhC-----------CCCceeEEEEEEec
Q 002343 473 KLVVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH--DVALKEIQNLIASD-----------QHPNIVRWYGVESD 538 (934)
Q Consensus 473 ~~~~~~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~~~~--~~~~~Ei~~ll~~l-----------~HpNIV~l~g~~~~ 538 (934)
++|.+.++||+|+||+||++.. .+|+.||||++.+... +...+|+. +++.+ .|+|||++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~-~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK-LLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHH-HHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHH-HHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 4599999999999999999865 6799999999976532 34455655 33332 47899999988764
Q ss_pred --CCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHHHH
Q 002343 539 --QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIV 616 (934)
Q Consensus 539 --~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~qIa 616 (934)
....+++|++|.+....... . .......+++..++.++.||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~---------~---------------------------~~~~~~~~~~~~i~~i~~qil 135 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLAL---------I---------------------------KKYEHRGIPLIYVKQISKQLL 135 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHH---------H---------------------------HHTTTSCCCHHHHHHHHHHHH
T ss_pred ccccceeeeeeecccccccccc---------c---------------------------ccccccCCcHHHHHHHHHHHH
Confidence 45677777765542111110 0 011245678889999999999
Q ss_pred HHHHHHHH-CCCcccCCCCCeEEEecCCC----ceEEEeeccccccccCCCcccccCCCCcchhhHHHHHHHhhhhhhcc
Q 002343 617 SGLSHLHE-IGLIHRDLKPQNVLISKDKS----FCAKLSDMGISKRLQGDMSCLTQNATGMDLQLVYLVSILLKLVICEC 691 (934)
Q Consensus 617 ~gL~yLHs-~gIVHRDLKP~NILl~~d~~----~~vKLsDFGlAk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (934)
.||+|||+ +||+||||||+||||+.++. ..+|++|||.|+.......
T Consensus 136 ~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~---------------------------- 187 (362)
T d1q8ya_ 136 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT---------------------------- 187 (362)
T ss_dssp HHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC----------------------------
T ss_pred HHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccc----------------------------
Confidence 99999998 89999999999999975443 3589999999976543211
Q ss_pred ccccccceeecCCCCCccccchhcccCCCcccccccchhhhhHHhhcCCCCCCCCchh--------HHHHHHhh--c---
Q 002343 692 VFQFGVLFFTVGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGGKHPYGESFE--------RDANIVKD--R--- 758 (934)
Q Consensus 692 ~~~~g~~~~t~~~GT~~Y~APE~l~~~~~t~ksDIWSLGvILyeLltGg~~Pf~~~~~--------~~~~i~~~--~--- 758 (934)
..+||+.|+|||++.+..++.++||||+||++++|++| ++||..... .....+.. .
T Consensus 188 ----------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g-~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~ 256 (362)
T d1q8ya_ 188 ----------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG-DFLFEPDEGHSYTKDDDHIAQIIELLGELPS 256 (362)
T ss_dssp ----------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHS-SCCC---------CHHHHHHHHHHHHCSCCH
T ss_pred ----------cccccccccChhhccccCCCccccccchHHHHHHHHHC-CCCCCCCccccccchhHHHHHHHHHhCCCCH
Confidence 15699999999999999999999999999999999996 667743211 00100000 0
Q ss_pred ------------------------------------ccccccCCCHHHHHHHHHcccCCCCCCcCHHHHHcCCCCCCc
Q 002343 759 ------------------------------------KDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 800 (934)
Q Consensus 759 ------------------------------------~~~~~~~~~~e~~dLI~~~L~~DP~~RPTa~evL~HPff~~~ 800 (934)
........+++++|||.+||..||.+||||+|+|+||||.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 257 YLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp HHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred HHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 000011124679999999999999999999999999999743
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=1.4e-22 Score=205.68 Aligned_cols=130 Identities=18% Similarity=0.127 Sum_probs=98.4
Q ss_pred EEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---------------------hHHHHHHHHHHHhCCCCceeEEEE
Q 002343 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---------------------DVALKEIQNLIASDQHPNIVRWYG 534 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---------------------~~~~~Ei~~ll~~l~HpNIV~l~g 534 (934)
.+++.||+|+||+||++...+|+.||||++..... ....+|.. .+..+.|+|++..++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~v~~~~~ 81 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR-ALQKLQGLAVPKVYA 81 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH-HHHHTTTSSSCCEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHH-HHHHccCCCcceEEE
Confidence 46789999999999999878899999998642110 11223443 566789999999987
Q ss_pred EEecCCeEEEEEecccCChhhhHHhhcCCHHHHHhhhhccchhHHHHHHhhcccccchhhhHhhhhCCCCHHHHHHHHHH
Q 002343 535 VESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRD 614 (934)
Q Consensus 535 ~~~~~~~~yLVmE~c~~sL~dli~~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~q 614 (934)
+.. .+++||+|++.... .++...+..++.|
T Consensus 82 ~~~----~~lvme~~~~~~~~----------------------------------------------~l~~~~~~~i~~q 111 (191)
T d1zara2 82 WEG----NAVLMELIDAKELY----------------------------------------------RVRVENPDEVLDM 111 (191)
T ss_dssp EET----TEEEEECCCCEEGG----------------------------------------------GCCCSCHHHHHHH
T ss_pred ecC----CEEEEEeecccccc----------------------------------------------chhhHHHHHHHHH
Confidence 643 27999988753110 0122335678999
Q ss_pred HHHHHHHHHHCCCcccCCCCCeEEEecCCCceEEEeecccccccc
Q 002343 615 IVSGLSHLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQ 659 (934)
Q Consensus 615 Ia~gL~yLHs~gIVHRDLKP~NILl~~d~~~~vKLsDFGlAk~l~ 659 (934)
++.||+|||++||+||||||+|||+++++ ++|+|||+|+...
T Consensus 112 l~~~l~~lH~~giiHrDiKP~NILv~~~~---~~liDFG~a~~~~ 153 (191)
T d1zara2 112 ILEEVAKFYHRGIVHGDLSQYNVLVSEEG---IWIIDFPQSVEVG 153 (191)
T ss_dssp HHHHHHHHHHTTEECSCCSTTSEEEETTE---EEECCCTTCEETT
T ss_pred HHHHHHHHhhCCEEEccCChhheeeeCCC---EEEEECCCcccCC
Confidence 99999999999999999999999997543 8999999997654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=97.49 E-value=0.00043 Score=79.38 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=77.9
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeecccccc-CCCC------ccccccCCCCceeEEeccccCcee---
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASF-NSNA------SEFYLDVDEDWELYFHSKRFGKMK--- 116 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~-~~~~------~~~~l~~~~d~~ly~~~~~~g~~~--- 116 (934)
-+++++|.|-+|.|+|+|..||+++|+|..+.+-........ .... ..+|+. ..||.||.++...|++.
T Consensus 65 ~~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~g~l~Alda~tG~~~w~~ 143 (560)
T d1kv9a2 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVG-TLDGRLIALDAKTGKAIWSQ 143 (560)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEE-eCCCEEEEEECCCCcEEecc
Confidence 678999999999999999999999999974433211100000 0001 124444 46899999998888664
Q ss_pred ec-ccCHHHHHhcCCeeecCCceEeecee------eEEEEEeCCCceEEEEEecC
Q 002343 117 KL-SSSAEEYIRRMPYISKDGGVTLGAMK------TSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 117 kl-p~ti~e~v~~sP~~s~Dg~~~~G~k~------~t~f~vd~~tG~~~~~~~~~ 164 (934)
++ -....-.+..+|.+- +|.+++|... -.+..+|++||+++=++.+-
T Consensus 144 ~~~~~~~~~~~~~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~ 197 (560)
T d1kv9a2 144 QTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV 197 (560)
T ss_dssp ECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred CccCcccceeeeeeeeee-cCcccccccceeccccceEEEEECCCceEEeeeeec
Confidence 11 011111234788887 8888888754 35999999999999998763
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.44 E-value=0.00042 Score=79.81 Aligned_cols=129 Identities=21% Similarity=0.298 Sum_probs=82.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
-++++.|+|-+|.|+|+|..||+++|++....+.... +.. +. +
T Consensus 67 ~~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~----------~~~----------------~~-----------~ 109 (582)
T d1flga_ 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIR----------PCC----------------DV-----------V 109 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCC----------CSS----------------CS-----------C
T ss_pred ECCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccc----------ccc----------------cc-----------c
Confidence 5789999999999999999999999999744322111 000 00 0
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
.+.|-.. ++.+|+|.-...++.+|++||+++-.....+... .+.....+..+.++... ..++|
T Consensus 110 ~rg~a~~-~~~i~~~t~~~~l~alda~tG~~~W~~~~~~~~~-----------~~~~~~~p~~~~~~~~~-----~~~~i 172 (582)
T d1flga_ 110 NRGAAIY-GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGA-----------GYTMTGAPTIVKDGKTG-----KVLLI 172 (582)
T ss_dssp CCCCEEE-TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGG-----------TCBCCSCCEEEECTTTC-----CEEEE
T ss_pred cCCceEe-CCceEEecCCCeEEEecccccceeeeecccCCCc-----------cceeecCceEecCCcEe-----EEEEE
Confidence 0122233 5668889888899999999999997766543211 22222333333333321 13444
Q ss_pred Eee-------eEEEEEecCCCCceEEEEEe
Q 002343 207 MRT-------DYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 207 ~Rt-------dY~v~~~~~~s~~~~WN~t~ 229 (934)
.-+ .-.|.++|.++|+++|....
T Consensus 173 ~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~ 202 (582)
T d1flga_ 173 HGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp ECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred eCccccccccccceEEecCCCCcEEEEEec
Confidence 322 23689999999999997643
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=97.23 E-value=0.00091 Score=76.73 Aligned_cols=127 Identities=17% Similarity=0.200 Sum_probs=80.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
-+++++|.|-+|.|+|+|..||+++|+++-..+...... .+. +. +
T Consensus 76 ~~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~------------~~~------------~~-----------~ 120 (573)
T d1kb0a2 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFK------------GCC------------DV-----------V 120 (573)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGG------------SSS------------CS-----------C
T ss_pred ECCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccc------------ccc------------cc-----------c
Confidence 678999999999999999999999999974332211100 000 00 1
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
.+.+... +|.+|++.-...+|.+|++||+++-.....+... +.... . ..|-. ....|+|
T Consensus 121 ~~g~~~~-~~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~---------~~~~~-~-----~~p~v-----~~~~viv 179 (573)
T d1kb0a2 121 NRGVALW-KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK---------GSLTI-T-----GAPRV-----FKGKVII 179 (573)
T ss_dssp CCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC---------SSCBC-C-----SCCEE-----ETTEEEE
T ss_pred cccceEE-CCcEEEEecccceeeeccccccceecccCccCCc---------ceEEe-e-----cceEE-----EeccEEE
Confidence 1223333 5668888877889999999999998776533210 00000 0 00000 1126677
Q ss_pred EeeeE------EEEEecCCCCceEEEEEe
Q 002343 207 MRTDY------VLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 207 ~RtdY------~v~~~~~~s~~~~WN~t~ 229 (934)
+-..+ .|.++|.++|+++|....
T Consensus 180 g~~~~~~~~~G~v~a~D~~TG~~~W~~~t 208 (573)
T d1kb0a2 180 GNGGAEYGVRGYITAYDAETGERKWRWFS 208 (573)
T ss_dssp CCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred eeccccccccceEEEEecCCccceeeeee
Confidence 65544 589999999999998744
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.20 E-value=0.00086 Score=76.97 Aligned_cols=116 Identities=14% Similarity=0.217 Sum_probs=79.2
Q ss_pred CCCeEEEEe-eCCeEEEEec-CCCeeeeEecCCCceeec-cccccCCCC------ccccccCCCCceeEEeccccCcee-
Q 002343 47 EPDVALVAA-LDGTIHLVDT-KLGKIRWSFGTGRPIYSS-YQASFNSNA------SEFYLDVDEDWELYFHSKRFGKMK- 116 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~-~sg~~~W~~~~~~~i~~~-~~~~~~~~~------~~~~l~~~~d~~ly~~~~~~g~~~- 116 (934)
.++++.|+| .+|.|+|+|. .||+.+|+|+...+.... ........+ ..+|+.+ .||.||.++.+.|++.
T Consensus 61 ~~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~~-~~g~l~alda~tG~~~w 139 (571)
T d2ad6a1 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ-ANGHLLALDAKTGKINW 139 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred ECCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeCCeEEEEe-CCCcEEeeehhhhhhhc
Confidence 678888887 5899999996 589999999854444321 111111111 2355554 6799999999888763
Q ss_pred --ecc-cCHHHHHhcCCeeecCCceEeece------eeEEEEEeCCCceEEEEEecC
Q 002343 117 --KLS-SSAEEYIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 117 --klp-~ti~e~v~~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~~ 164 (934)
++. ....-.+.++|.+- +|.||+|.. ...+..+|++||+++=++...
T Consensus 140 ~~~~~~~~~~~~~t~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~ 195 (571)
T d2ad6a1 140 EVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred cccccccccccceeecCeEe-CCeEEEeeccccccccCcEEEEECCCCcEEEEEecc
Confidence 221 11222345889888 677888875 557999999999999988754
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.18 E-value=0.00069 Score=68.86 Aligned_cols=76 Identities=11% Similarity=-0.026 Sum_probs=48.4
Q ss_pred EEeeeecccCcEEEEEEEEecCcEEEEEEeecCCh---hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEecccCC
Q 002343 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (934)
Q Consensus 476 ~~~~~IG~GsfGtVy~~~~~~g~~VAVK~l~~~~~---~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~s 552 (934)
.+.+..+-++.+.||+. ..+++.+.||+...... ....+|...+...-.+--+.+++.++.+++..|+||++.++.
T Consensus 17 ~~~~~~~G~s~~~v~rv-~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~ 95 (263)
T d1j7la_ 17 RCVKDTEGMSPAKVYKL-VGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV 95 (263)
T ss_dssp EEEECSCCCSSSEEEEE-ECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred EEEEcCCCCCCCcEEEE-EeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccc
Confidence 34444455666789874 34666788898754322 234455543322233444677888888889999999998874
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.65 E-value=0.0013 Score=66.41 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=46.6
Q ss_pred ecccC-cEEEEEEEEecCcEEEEEEeecCChhHHHHHHHH--HHHhCCCCceeEEEEEEecCCeEEEEEecccC
Q 002343 481 IAKGS-NGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQN--LIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (934)
Q Consensus 481 IG~Gs-fGtVy~~~~~~g~~VAVK~l~~~~~~~~~~Ei~~--ll~~l~HpNIV~l~g~~~~~~~~yLVmE~c~~ 551 (934)
+..|. .+.||+.....+..+.+|.-..........|... .++. ..-.+.+++++..+++..|+|||+++|
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~-~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLAT-TGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHT-TTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHh-cCCCCCceeeecccccceEEEEEeeec
Confidence 34444 4678887666677788998655443334444442 2332 234477888888888999999999976
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.53 E-value=0.0045 Score=71.13 Aligned_cols=74 Identities=23% Similarity=0.363 Sum_probs=52.7
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHHh
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v~ 127 (934)
+..+++.|.||.|+|+|..||++.|++..+.+-... .. .
T Consensus 121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~-----------------------------~~------------t 159 (596)
T d1w6sa_ 121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGS-----------------------------TL------------T 159 (596)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTC-----------------------------BC------------C
T ss_pred ceEEEEEeCCCCeEeeccccCceecccccccccccc-----------------------------cc------------c
Confidence 457889999999999999999999999754221000 00 1
Q ss_pred cCCeeecCCceEeece------eeEEEEEeCCCceEEEEEec
Q 002343 128 RMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 128 ~sP~~s~Dg~~~~G~k------~~t~f~vd~~tG~~~~~~~~ 163 (934)
++|.+- ++.||+|.- .-.+..+|++||+++=++.+
T Consensus 160 ~~P~v~-~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t 200 (596)
T d1w6sa_ 160 IAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (596)
T ss_dssp SCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred cCCcEE-CCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence 456555 445666543 25789999999999987664
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=96.47 E-value=0.0087 Score=68.62 Aligned_cols=132 Identities=13% Similarity=0.107 Sum_probs=78.0
Q ss_pred CCCeEEEEee-CCeEEEEec-CCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 47 EPDVALVAAL-DGTIHLVDT-KLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstl-dG~~~~v~~-~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
-+++++|+|- +|.++|+|- .||+++|+|.-........-+.... ...|=.|.-+. +.
T Consensus 61 ~~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~---------~~RGv~~~~~~--~~---------- 119 (596)
T d1w6sa_ 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDL---------VNRGLAYWPGD--GK---------- 119 (596)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCS---------CCCCCEEECCC--SS----------
T ss_pred ECCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCccccccccccc---------ccceeEEecCC--CC----------
Confidence 5678887764 799999996 6999999998433321110000000 11121111110 00
Q ss_pred HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceE
Q 002343 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (934)
Q Consensus 125 ~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (934)
....||.|.-.-.++.||++||+++-.+...+... .... ...|-. ....|
T Consensus 120 ---------~~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~-----------~~~~-----t~~P~v-----~~~~v 169 (596)
T d1w6sa_ 120 ---------TPALILKTQLDGNVAALNAETGETVWKVENSDIKV-----------GSTL-----TIAPYV-----VKDKV 169 (596)
T ss_dssp ---------SCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGG-----------TCBC-----CSCCEE-----ETTEE
T ss_pred ---------CceEEEEEeCCCCeEeeccccCceecccccccccc-----------cccc-----ccCCcE-----ECCeE
Confidence 12357888888889999999999999986543211 0000 001111 12377
Q ss_pred EEEeeeE------EEEEecCCCCceEEEEEe
Q 002343 205 YIMRTDY------VLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 205 ~i~RtdY------~v~~~~~~s~~~~WN~t~ 229 (934)
||+-+.+ .|.+||.++|+++|....
T Consensus 170 ivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t 200 (596)
T d1w6sa_ 170 IIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (596)
T ss_dssp EECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEeeccccccccCceEEEECCCCcEEEEeec
Confidence 8876543 689999999999997543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.17 E-value=0.022 Score=57.63 Aligned_cols=157 Identities=14% Similarity=0.095 Sum_probs=94.9
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCceee-ccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHHH
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYS-SYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYI 126 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~-~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~v 126 (934)
+.+++++.||+|+.+|..|+++.+++.-...-.. ..-+...+ ...+|+-...|+.+++.+-..|++. +++...+..-
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spD-g~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~ 80 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG-GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTT-SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCC-CCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc
Confidence 5788999999999999999999999963211100 00111222 2346777778899999887666553 4444332211
Q ss_pred hcCC---eeecCC-ceEeec------------eeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccc
Q 002343 127 RRMP---YISKDG-GVTLGA------------MKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELV 190 (934)
Q Consensus 127 ~~sP---~~s~Dg-~~~~G~------------k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (934)
..+| .+|+|| .+|++. ....+.+.|..||+.+++........ .++ +
T Consensus 81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----------~~~--------~ 142 (337)
T d1pbyb_ 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQIT----------MLA--------W 142 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCC----------CEE--------E
T ss_pred ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCce----------EEE--------E
Confidence 1112 356677 344443 34578899999999999987643211 010 1
Q ss_pred cccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEeeeec
Q 002343 191 ESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFK 233 (934)
Q Consensus 191 ~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~~~~ 233 (934)
.| +. ..+|.+-.+ +..+|..+++..+++....+.
T Consensus 143 s~---dg----~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~ 176 (337)
T d1pbyb_ 143 AR---DG----SKLYGLGRD--LHVMDPEAGTLVEDKPIQSWE 176 (337)
T ss_dssp CT---TS----SCEEEESSS--EEEEETTTTEEEEEECSTTTT
T ss_pred cC---CC----CEEEEEcCC--cceeeeecCcEEEEeecCCcc
Confidence 01 00 145554333 344788999999988776544
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.15 E-value=0.0071 Score=68.81 Aligned_cols=152 Identities=13% Similarity=0.148 Sum_probs=86.0
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccc---------cCC--CC---------------ccccccCCCC
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQAS---------FNS--NA---------------SEFYLDVDED 102 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~---------~~~--~~---------------~~~~l~~~~d 102 (934)
..+++.+-+|.+|++|+.||++.|....++.......-. ... .+ +..| +|+.
T Consensus 315 ~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~--dp~~ 392 (560)
T d1kv9a2 315 KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF--NPGT 392 (560)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE--ETTT
T ss_pred eeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeeccccccccccccc--cCCC
Confidence 466778899999999999999999998776542211000 000 00 0112 4566
Q ss_pred ceeEEeccccCceeecccCHHHHHhcCCeeec-----CCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCC
Q 002343 103 WELYFHSKRFGKMKKLSSSAEEYIRRMPYISK-----DGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDEN 177 (934)
Q Consensus 103 ~~ly~~~~~~g~~~klp~ti~e~v~~sP~~s~-----Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~ 177 (934)
+-+|+-..+...+.++. -.+++........ ....-.+.-.-.+..+|+.||+++=.+....... .
T Consensus 393 ~~~yvp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~~~--------g 462 (560)
T d1kv9a2 393 GLVYIPYQEVPGVYRNE--GKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWN--------G 462 (560)
T ss_dssp TEEEEEEEECCEEECCC--GGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCC--------C
T ss_pred Ceeecccccccceeecc--ccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCCCC--------C
Confidence 66666433322221110 0000000000000 0001112334578999999999999987654211 0
Q ss_pred CccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEe
Q 002343 178 KHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
+.+ .. ++ -+||+|..|=.+.+||.++|+++|....
T Consensus 463 g~l---------~T---ag-----glVF~G~~dg~l~A~Da~tGe~LW~~~l 497 (560)
T d1kv9a2 463 GTL---------ST---AG-----NLVFQGTAAGQMHAYSADKGEALWQFEA 497 (560)
T ss_dssp CEE---------EE---TT-----TEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cee---------EE---CC-----CEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence 001 11 11 2899999999999999999999998654
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.03 E-value=0.0092 Score=68.06 Aligned_cols=150 Identities=15% Similarity=0.139 Sum_probs=84.0
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccC--------------CCC---------------ccccccC
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFN--------------SNA---------------SEFYLDV 99 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~--------------~~~---------------~~~~l~~ 99 (934)
..+++.+-+|.+|++|..||++.|..+..+........... ..+ ...| +
T Consensus 317 ~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~--d 394 (571)
T d2ad6a1 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSY--D 394 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEE--E
T ss_pred cceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceE--C
Confidence 35678889999999999999999987655433211100000 000 0122 4
Q ss_pred CCCceeEEeccccCce---eecccCHHHHHhcCCeeecCCceEee------ceeeEEEEEeCCCceEEEEEecCCCCCCC
Q 002343 100 DEDWELYFHSKRFGKM---KKLSSSAEEYIRRMPYISKDGGVTLG------AMKTSVFLVDVKSGRVVDNYVLDFSASTP 170 (934)
Q Consensus 100 ~~d~~ly~~~~~~g~~---~klp~ti~e~v~~sP~~s~Dg~~~~G------~k~~t~f~vd~~tG~~~~~~~~~~~~~~~ 170 (934)
|+-+-+|+...+.... .+.|+... .+....+..++.+ ..--.+..+|++||+++=++......-
T Consensus 395 P~~~~~yv~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~-- 467 (571)
T d2ad6a1 395 PESRTLYAGLNHICMDWEPFMLPYRAG-----QFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAW-- 467 (571)
T ss_dssp TTTTEEEEEEECEEEEEEECCCCCCTT-----SCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCC--
T ss_pred CCCceEEEeccccccccccccccccCC-----ccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCC--
Confidence 5666677643321111 01122111 1111111111111 111378899999999998887654211
Q ss_pred CCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceEEEEEee
Q 002343 171 GFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (934)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~t~~ 230 (934)
+ +. +.+ ...+||++..|=.+.+||.++|+++|.....
T Consensus 468 ---~----g~--------l~T--------agglVf~G~~dg~l~A~Da~tGe~lW~~~l~ 504 (571)
T d2ad6a1 468 ---G----GT--------LYT--------KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp ---S----BC--------EEE--------TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ---c----ce--------eEe--------cCCEEEEECCCCeEEEEECCCCcEEEEEECC
Confidence 0 00 011 1138999999999999999999999987543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.94 E-value=0.012 Score=67.14 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=44.3
Q ss_pred eEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeeeEEEEEecCCCCceE
Q 002343 145 TSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 145 ~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~ 224 (934)
-++..+|+.||+++=++....... ... +.. + ..+||+|-.|-.+.+||.++|+++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~----------gg~-------lst---a-----gglVF~G~~dg~l~A~Da~TGe~L 511 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWN----------GGT-------LTT---A-----GNVVFQGTADGRLVAYHAATGEKL 511 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC----------CCE-------EEE---T-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeCCCCCceEeeecCCCCCC----------Cce-------EEE---c-----CCEEEEECCCCeEEEEECCCCcEe
Confidence 478999999999999887643211 000 111 1 128999999999999999999999
Q ss_pred EEEEe
Q 002343 225 WNVAY 229 (934)
Q Consensus 225 WN~t~ 229 (934)
|....
T Consensus 512 W~~~~ 516 (573)
T d1kb0a2 512 WEAPT 516 (573)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98664
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.22 E-value=0.021 Score=65.10 Aligned_cols=90 Identities=22% Similarity=0.400 Sum_probs=65.4
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
+++|.+. ||+||+++-...+|.|||+||+++=+|..... ++....|. .++.|.+- ....||+
T Consensus 61 ~stPiv~-~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~--------~~~~~~~~------~~~rg~a~---~~~~i~~ 122 (582)
T d1flga_ 61 ESQAIVS-DGVIYVTASYSRLFALDAKTGKRLWTYNHRLP--------DDIRPCCD------VVNRGAAI---YGDKVFF 122 (582)
T ss_dssp CCCCEEE-TTEEEEEETTTEEEEEESSSCCEEEEEECCCC--------TTCCCSSC------SCCCCCEE---ETTEEEE
T ss_pred ccCCEEE-CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC--------Cccccccc------cccCCceE---eCCceEE
Confidence 4899998 99999999999999999999999988864221 01111111 11111110 1237899
Q ss_pred EeeeEEEEEecCCCCceEEEEEeeeecc
Q 002343 207 MRTDYVLQSTSQDSGEVLWNVAYADFKA 234 (934)
Q Consensus 207 ~RtdY~v~~~~~~s~~~~WN~t~~~~~a 234 (934)
+=.+-.|.++|.++|+++|...+.+...
T Consensus 123 ~t~~~~l~alda~tG~~~W~~~~~~~~~ 150 (582)
T d1flga_ 123 GTLDASVVALNKNTGKVVWKKKFADHGA 150 (582)
T ss_dssp EETTTEEEEEESSSCCEEEEEECSCGGG
T ss_pred ecCCCeEEEecccccceeeeecccCCCc
Confidence 9889999999999999999999988764
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=95.17 E-value=0.025 Score=61.13 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=43.4
Q ss_pred eeeecccCcEEEEEEEE-ecCcEEEEEEeec------C----ChhHHHHHHHHHH--HhCCCCceeEEEEEEecCCeEEE
Q 002343 478 NKEIAKGSNGTVVLEGN-YEGRSVAVKRLVK------T----HHDVALKEIQNLI--ASDQHPNIVRWYGVESDQDFVYL 544 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~-~~g~~VAVK~l~~------~----~~~~~~~Ei~~ll--~~l~HpNIV~l~g~~~~~~~~yL 544 (934)
.+.||.|....||+... ..++.|.||.-.. . ..+....|...+. ...-...+.+++.+. .+..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence 45789999999998754 3467899996432 1 1133445554332 222234567777664 344578
Q ss_pred EEecccC
Q 002343 545 SLERCTC 551 (934)
Q Consensus 545 VmE~c~~ 551 (934)
|||++.+
T Consensus 109 vmE~L~~ 115 (392)
T d2pula1 109 VMEDLSH 115 (392)
T ss_dssp EECCCTT
T ss_pred EEeccCC
Confidence 9998875
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=94.13 E-value=0.017 Score=60.59 Aligned_cols=64 Identities=17% Similarity=0.100 Sum_probs=37.4
Q ss_pred EEEEEEEEecCcEEEEEEeecCC-h-hHHHHHHHHHHHhCC-----CCceeEEE--EEEecCCeEEEEEecccC
Q 002343 487 GTVVLEGNYEGRSVAVKRLVKTH-H-DVALKEIQNLIASDQ-----HPNIVRWY--GVESDQDFVYLSLERCTC 551 (934)
Q Consensus 487 GtVy~~~~~~g~~VAVK~l~~~~-~-~~~~~Ei~~ll~~l~-----HpNIV~l~--g~~~~~~~~yLVmE~c~~ 551 (934)
-.||+....+|+.|++|+..... . +....|.. ++..+. .+..+..- ......++.+.+++++.|
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~-~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G 108 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQ-FALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 108 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHH-HHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHH-HHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence 47898888889999999886543 2 33344443 333221 11111111 122346778999999887
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.08 E-value=0.17 Score=49.57 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=65.5
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
...+++.++.||+|+..|..+|+...+|+. ..++.+-. -......+.-...++.+.......+.... .+....-
T Consensus 28 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 102 (317)
T d1vyhc1 28 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS----FDHSGKLLASCSADMTIKLWDFQGFECIR-TMHGHDH 102 (317)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEE----ECTTSSEEEEEETTSCCCEEETTSSCEEE-CCCCCSS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEe----eeccccccccccccccccccccccccccc-ccccccc
Confidence 467888889999999999999999999973 23333210 01111223333334443333332222211 1111100
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
...+-+.++|| .+++++...++.+.|.++|+.++++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 142 (317)
T d1vyhc1 103 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 142 (317)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred cceeeeccCCCceEEeeccCcceeEeecccceeeeEEccC
Confidence 11223334444 5778888889999999999999998743
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.90 E-value=0.38 Score=48.94 Aligned_cols=111 Identities=12% Similarity=-0.050 Sum_probs=73.7
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
....+++++.||+++.+|..+|+....+....+|.+-. -.++...++-...||.+++.+-..+...+.... ..-
T Consensus 194 ~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~- 267 (337)
T d1gxra_ 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG----YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH-ESC- 267 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTSSCEEEECCC-SSC-
T ss_pred cccccccccccccccccccccceeecccccccceEEEE----Ecccccccceecccccccccccccccccccccc-ccc-
Confidence 46788889999999999999999999998666665421 111223444456677777766544433222110 000
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
-.+=+.++|| .+++|+..-++.+-|..+|+.+.++.-
T Consensus 268 i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 305 (337)
T d1gxra_ 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE 305 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccC
Confidence 0122456787 677898888999999999999988763
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.71 E-value=0.13 Score=51.51 Aligned_cols=113 Identities=14% Similarity=0.023 Sum_probs=75.5
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e 124 (934)
...+++.++.||+|+..|..+++...+|.. ..+|.+-. -.++...++-...||.+++.+...+.. ..+......
T Consensus 195 ~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~----~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~ 270 (340)
T d1tbga_ 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC----FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII 270 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC
T ss_pred ccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEE----ECCCCCEEEEEeCCCeEEEEeeccccccccccccccc
Confidence 567888899999999999999999999984 34443310 111234566777889888876544322 222211110
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
---.+=+.++|| .|++|+..-++.+.|..+|+.++++..
T Consensus 271 ~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 310 (340)
T d1tbga_ 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp SCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcC
Confidence 000122345676 688899999999999999999999864
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.67 E-value=0.11 Score=51.69 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=73.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
.+..+++++.||+|+..|..+++...++........... .+ +..++-...||.+++.+...+...+.-.....-+
T Consensus 186 ~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~--~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 260 (342)
T d2ovrb2 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME--LK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 260 (342)
T ss_dssp CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE--EE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS
T ss_pred CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEe--cC---CCEEEEEcCCCEEEEEecccccccccccccceee
Confidence 456788899999999999999999988886443322210 11 2356667889999987765443322211111111
Q ss_pred hcCCeeecC-CceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 127 RRMPYISKD-GGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 127 ~~sP~~s~D-g~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
...-+.+.| ..+++|+..-++.+-|.+||+.++++...
T Consensus 261 ~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~ 299 (342)
T d2ovrb2 261 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299 (342)
T ss_dssp SCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEEC
T ss_pred eceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecc
Confidence 111223333 36788998899999999999999998753
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.24 E-value=0.4 Score=47.34 Aligned_cols=156 Identities=13% Similarity=0.099 Sum_probs=95.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~v 126 (934)
....+++++.||+++..|...++...++........... . ++..++-...||.+++.+...+...+....-...|
T Consensus 146 ~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~---~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v 220 (342)
T d2ovrb2 146 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ--F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 220 (342)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE--E---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE
T ss_pred ccceeeeecCCCeEEEeecccceeeEEEcCccccccccc--C---CCCEEEEEeCCCeEEEeecccceeeeEecccccce
Confidence 355677788888888888888888888764333222110 1 12345666788888887765555433221111111
Q ss_pred hcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEE
Q 002343 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (934)
Q Consensus 127 ~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 206 (934)
.+ +..++..+++|+...++.+-|..+++..+.+....... ..-.| +.+ + ...+..
T Consensus 221 -~~-~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~--------~~~---~----~~~~~s 275 (342)
T d2ovrb2 221 -SG-MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ--------SAVTC--------LQF---N----KNFVIT 275 (342)
T ss_dssp -EE-EEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS--------SCEEE--------EEE---C----SSEEEE
T ss_pred -eE-EecCCCEEEEEcCCCEEEEEecccccccccccccceee--------eceee--------ccc---C----CCeeEE
Confidence 11 12235588999999999999999999988876432211 00000 100 1 126777
Q ss_pred EeeeEEEEEecCCCCceEEEEEeeee
Q 002343 207 MRTDYVLQSTSQDSGEVLWNVAYADF 232 (934)
Q Consensus 207 ~RtdY~v~~~~~~s~~~~WN~t~~~~ 232 (934)
+-.|=+|..+|.++|+...++...+.
T Consensus 276 ~s~Dg~i~iwd~~tg~~i~~~~~~~~ 301 (342)
T d2ovrb2 276 SSDDGTVKLWDLKTGEFIRNLVTLES 301 (342)
T ss_dssp EETTSEEEEEETTTCCEEEEEEECTT
T ss_pred EcCCCEEEEEECCCCCEEEEEecccC
Confidence 77888899999999998887765443
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.18 E-value=0.14 Score=54.73 Aligned_cols=114 Identities=15% Similarity=0.063 Sum_probs=75.0
Q ss_pred CCeEEE-EeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce---eecccC-H
Q 002343 48 PDVALV-AALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM---KKLSSS-A 122 (934)
Q Consensus 48 ~~~~lv-stldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~---~klp~t-i 122 (934)
.++++| +.-||+|+.+|..||++..+|..|...++- ++..+ ...+|.- ..||.+.+.+...|+. .+++.. -
T Consensus 31 ~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~v--afSPD-Gk~l~~~-~~d~~v~vwd~~t~~~~~~~~i~~~~~ 106 (426)
T d1hzua2 31 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS--RMSAS-GRYLLVI-GRDARIDMIDLWAKEPTKVAEIKIGIE 106 (426)
T ss_dssp GGEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEE--EECTT-SCEEEEE-ETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred CeEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEE--EECCC-CCEEEEE-eCCCCEEEEEccCCceeEEEEEeCCCC
Confidence 445555 456899999999999999999988665432 22222 2234443 4678877766544432 122221 2
Q ss_pred HHHHhcCCeeecCCc-eEeec-eeeEEEEEeCCCceEEEEEecCC
Q 002343 123 EEYIRRMPYISKDGG-VTLGA-MKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg~-~~~G~-k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
++-+..||..|+||- +++++ -..++-+.|..+|+.++......
T Consensus 107 ~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~ 151 (426)
T d1hzua2 107 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 151 (426)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred CcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccC
Confidence 334447899999994 45554 56778888999999999887543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.04 E-value=0.17 Score=50.63 Aligned_cols=172 Identities=12% Similarity=0.026 Sum_probs=88.0
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceee-cccCHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKK-LSSSAEEY 125 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~k-lp~ti~e~ 125 (934)
+.+++.++.||+|+..|..+|+...+|+. ..+|.+-. +.+ ...++-.+.||.+++.....+.... ........
T Consensus 23 ~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~--~s~---~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 97 (355)
T d1nexb2 23 DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK--YAH---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV 97 (355)
T ss_dssp TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEE--EET---TTEEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEE--EcC---CCEEEEEecccccccccccccccccccccccccc
Confidence 56888899999999999999999999983 33443321 112 2356778899999887654443321 11111111
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCc-cccCCCccccccccCCccccccce
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKH-VVPVDGYEELVESGVGNLKRIRQL 203 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 203 (934)
.......+.|+ .+.+|+...++.+-|..++..+.................+... ..........+..... ....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~ 173 (355)
T d1nexb2 98 RCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG----HGNI 173 (355)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEE----ETTE
T ss_pred cccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccccc----ccce
Confidence 11122334454 4677888888999999999887776543321100000011100 0000000000100010 1136
Q ss_pred EEEEeeeEEEEEecCCCCceEEEEE
Q 002343 204 VYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 204 i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
+..+..|..|..+|..+++......
T Consensus 174 ~~~~~~d~~i~~~d~~~~~~~~~~~ 198 (355)
T d1nexb2 174 VVSGSYDNTLIVWDVAQMKCLYILS 198 (355)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eeeecccceeeeeecccccceeeee
Confidence 7778888888888887777665443
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.85 E-value=0.42 Score=48.60 Aligned_cols=148 Identities=11% Similarity=0.064 Sum_probs=87.3
Q ss_pred CCCeEEEEeeCCeEEEEecC--CCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHH
Q 002343 47 EPDVALVAALDGTIHLVDTK--LGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE 123 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~--sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~ 123 (934)
....+++++.||+|+..|.. +++...++.. .+.+..-. -..+...++-+..|+.++..+-..+...+.-..-.
T Consensus 108 dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~ 183 (337)
T d1gxra_ 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA----ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 183 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEeecccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence 46788888999999999854 6666777664 34443211 11122344556677777776655544433222111
Q ss_pred HHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 124 EYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 124 e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
+-| .+-+.+.|| .+++|....++.+.|.++|+.++++...+. ..+++ .+|. ..
T Consensus 184 ~~v-~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~----------i~~l~--------~~~~-------~~ 237 (337)
T d1gxra_ 184 DGA-SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ----------IFSLG--------YCPT-------GE 237 (337)
T ss_dssp SCE-EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC----------EEEEE--------ECTT-------SS
T ss_pred ccc-ccccccccccccccccccccccccccccceeecccccccc----------eEEEE--------Eccc-------cc
Confidence 111 122455676 677899999999999999999999875331 00010 1111 12
Q ss_pred eEEEEeeeEEEEEecCCCCceE
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~ 224 (934)
.|+.+-.|-.|..+|.++++..
T Consensus 238 ~l~~~~~d~~i~i~d~~~~~~~ 259 (337)
T d1gxra_ 238 WLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp EEEEEETTSCEEEEETTSSCEE
T ss_pred ccceeccccccccccccccccc
Confidence 6677777777888887777653
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.66 E-value=0.25 Score=49.22 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=70.4
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
....+++++.||+|+..|..+|...+.+.. ..++.+- . .+ +..++-...||.+++.+.+.+.. ++.+--...
T Consensus 212 ~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~-~--~~---~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~ 284 (355)
T d1nexb2 212 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLL-R--LS---DKFLVSAAADGSIRGWDANDYSR-KFSYHHTNL 284 (355)
T ss_dssp TTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEE-E--EC---SSEEEEECTTSEEEEEETTTCCE-EEEEECTTC
T ss_pred cceeeecccccceEEeeecccccccccccccccccccc-c--cc---cceeeeeecccccccccccccce-ecccccCCc
Confidence 567888999999999999999999999984 2223221 0 11 23566678899999887655443 333322222
Q ss_pred HhcCCeeecCCceEeeceeeEEEEEeCCCceEEEE
Q 002343 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDN 160 (934)
Q Consensus 126 v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~ 160 (934)
+.. =+.+.||-+.++.-..++.+-|.+||+.+++
T Consensus 285 ~~~-~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~ 318 (355)
T d1nexb2 285 SAI-TTFYVSDNILVSGSENQFNIYNLRSGKLVHA 318 (355)
T ss_dssp CCC-CEEEECSSEEEEEETTEEEEEETTTCCBCCS
T ss_pred eEE-EEEcCCCCEEEEEeCCEEEEEECCCCCEEEE
Confidence 222 2445566555554577899999999998754
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=90.64 E-value=0.31 Score=48.72 Aligned_cols=114 Identities=16% Similarity=0.084 Sum_probs=70.5
Q ss_pred CCCCCCCeEEEEeeCCeEEEEecCCCeeeeEecC--C-CceeeccccccCCCCccccccCCCCceeEEeccccCceee-c
Q 002343 43 PLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGT--G-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKK-L 118 (934)
Q Consensus 43 ~~~~~~~~~lvstldG~~~~v~~~sg~~~W~~~~--~-~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~k-l 118 (934)
.-++.+.++++++-||+|+.+|..|+++.+++.- + .|-... ...+...+|+-+..|+.++..+...|+..+ +
T Consensus 3 a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~----~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~ 78 (346)
T d1jmxb_ 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAM----MAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 78 (346)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEE----ECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEE----ECCCCCEEEEEECCCCcEEEEeCccCeeeeee
Confidence 3466788999999999999999999999998862 2 222111 122223567888889999998776665432 2
Q ss_pred ccCHH-HHHhc---CCeeecCC-ceEeece------------eeEEEEEeCCCceEEEE
Q 002343 119 SSSAE-EYIRR---MPYISKDG-GVTLGAM------------KTSVFLVDVKSGRVVDN 160 (934)
Q Consensus 119 p~ti~-e~v~~---sP~~s~Dg-~~~~G~k------------~~t~f~vd~~tG~~~~~ 160 (934)
+..-. ..+.. +-.+|+|| .+|++.. ...+-++|..||+.++.
T Consensus 79 ~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 137 (346)
T d1jmxb_ 79 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 137 (346)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC
T ss_pred cccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeE
Confidence 22111 01111 23468888 4555543 33455567777665544
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=90.41 E-value=0.66 Score=45.63 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=65.6
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeE--ecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWS--FGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~--~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
.+..+++++-||+|+..|..++++.-. +....+|..-. -......++-...||.+++.+...+.......+..
T Consensus 147 ~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~- 221 (299)
T d1nr0a2 147 DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA----FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT- 221 (299)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEE----ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC-
T ss_pred cccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc-
Confidence 466788889999999999888876532 22223332210 11122345567788888887654443222111111
Q ss_pred HHhcCC----eeecCC-ceEeeceeeEEEEEeCCCceEEEEEe
Q 002343 125 YIRRMP----YISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYV 162 (934)
Q Consensus 125 ~v~~sP----~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~ 162 (934)
-+..| +.++|| .+++|+...++.+-|.+++.......
T Consensus 222 -~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 263 (299)
T d1nr0a2 222 -FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII 263 (299)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEE
T ss_pred -ccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEE
Confidence 01222 356777 57779888889999998887655544
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=89.85 E-value=0.8 Score=48.55 Aligned_cols=70 Identities=14% Similarity=0.030 Sum_probs=40.7
Q ss_pred eeeecccCcEEEEEEEEec--------CcEEEEEEeecCCh-hHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEEec
Q 002343 478 NKEIAKGSNGTVVLEGNYE--------GRSVAVKRLVKTHH-DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (934)
Q Consensus 478 ~~~IG~GsfGtVy~~~~~~--------g~~VAVK~l~~~~~-~~~~~Ei~~ll~~l~HpNIV~l~g~~~~~~~~yLVmE~ 548 (934)
.+.|+.|---.+|+....+ .+.|.+++...... ....+|...+...-.+.-..++++++.+ .+|+|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ef 122 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 122 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEE
Confidence 4578888888888865443 34566665543222 2334555432222234334578888754 588998
Q ss_pred ccC
Q 002343 549 CTC 551 (934)
Q Consensus 549 c~~ 551 (934)
.++
T Consensus 123 i~g 125 (395)
T d1nw1a_ 123 IPS 125 (395)
T ss_dssp CCE
T ss_pred ecc
Confidence 876
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=89.06 E-value=0.61 Score=47.20 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=73.0
Q ss_pred CCe-EEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCc-eeecccCHHH
Q 002343 48 PDV-ALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGK-MKKLSSSAEE 124 (934)
Q Consensus 48 ~~~-~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~-~~klp~ti~e 124 (934)
... ++.++-||+|+..|..+++....+.. ..+|.+-. -.++...++-...||.+++.+...+. +..++....+
T Consensus 158 ~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~----~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~ 233 (311)
T d1nr0a1 158 RPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR----YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233 (311)
T ss_dssp SSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred ceeeecccccccccccccccccccccccccccccccccc----cCccccccccccccccccccccccccccccccccccc
Confidence 444 44467899999999999999999985 34444321 11122455566778888887654442 2233322211
Q ss_pred HH-h----cCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 125 YI-R----RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 125 ~v-~----~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
+. + .+=++|+|| .|++|+..-++.+-|..||+.++++...
T Consensus 234 ~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~ 279 (311)
T d1nr0a1 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279 (311)
T ss_dssp SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred cccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECC
Confidence 11 0 122455666 6788998889999999999999998653
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=86.95 E-value=0.39 Score=51.60 Aligned_cols=111 Identities=11% Similarity=0.030 Sum_probs=76.7
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce---eecccC-HHHH
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM---KKLSSS-AEEY 125 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~---~klp~t-i~e~ 125 (934)
++++..-||+|.++|..||++.=+|..|...+.- +++.+. ..+|.- .+||.+...+-..++. ..+|-. =++=
T Consensus 34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v--~fSpDG-~~l~~~-s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~ 109 (432)
T d1qksa2 34 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHIS--RLSASG-RYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGSEARS 109 (432)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEE--EECTTS-CEEEEE-ETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEE--EECCCC-CEEEEE-cCCCCEEEEEeeCCCceEEEEEecCCCCCC
Confidence 3577788999999999999999999998754432 223322 245543 5688887766433332 233321 1222
Q ss_pred HhcCCeeecCCc-e-EeeceeeEEEEEeCCCceEEEEEecC
Q 002343 126 IRRMPYISKDGG-V-TLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 126 v~~sP~~s~Dg~-~-~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
+..+|..|.||- | .+++...++-++|+.||+.++++...
T Consensus 110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~ 150 (432)
T d1qksa2 110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 150 (432)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred eEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccC
Confidence 446888999993 3 56888889999999999999998754
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.54 E-value=1 Score=45.90 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=71.2
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY 125 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e~ 125 (934)
...++++++-||+|+..|..+++..+.+.. ..++.... .......++-...||.+.+.+...+....... ..+.
T Consensus 132 ~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~----~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~ 206 (388)
T d1erja_ 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLD----YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDG 206 (388)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE----ECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred CCCcceecccccccccccccccccccccccccccccccc----cccccccccccccceeeeeeeccccccccccc-cccc
Confidence 467888899999999999999999999873 33443321 11122345566777877776554433221111 1111
Q ss_pred HhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecC
Q 002343 126 IRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (934)
Q Consensus 126 v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~ 164 (934)
....-....|| .+++|+..-++.+.|.++|..+.++...
T Consensus 207 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 246 (388)
T d1erja_ 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246 (388)
T ss_dssp EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred cccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccc
Confidence 11111223455 6778999899999999999999998654
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.53 E-value=0.77 Score=47.76 Aligned_cols=114 Identities=10% Similarity=0.115 Sum_probs=64.9
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccc-----cccCCCCccccccCCCCce---eEEeccccCce-eec
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ-----ASFNSNASEFYLDVDEDWE---LYFHSKRFGKM-KKL 118 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~-----~~~~~~~~~~~l~~~~d~~---ly~~~~~~g~~-~kl 118 (934)
+.++++++-||+|+..|..+|+...++.....+..+.. ++.. ....++-..+|++ +.+.+...|.. ..|
T Consensus 195 dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~sp--dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l 272 (393)
T d1sq9a_ 195 RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP--QGSLLAIAHDSNSFGCITLYETEFGERIGSL 272 (393)
T ss_dssp TSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS--STTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccc--ccceeeeecCCCCcceeeecccccceeeeee
Confidence 44777888999999999999999999876554432200 0011 1123333344443 22222223221 122
Q ss_pred cc--CHHHHHh---------cCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEec
Q 002343 119 SS--SAEEYIR---------RMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVL 163 (934)
Q Consensus 119 p~--ti~e~v~---------~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~ 163 (934)
.. ...+.+. .+=++|+|| .|++|+..-++.+=|.+||+.++++.-
T Consensus 273 ~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~g 329 (393)
T d1sq9a_ 273 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM 329 (393)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECC
Confidence 11 1111111 111456787 788899999999999999999999863
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.84 E-value=1.6 Score=41.51 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=89.0
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEec--CCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG--TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
.+..++.++-||+|+..|..+|+...+|. ++++...+ .+ +..++-...||.++......+.... ......
T Consensus 24 d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~----~~---~~~l~s~s~D~~i~~~~~~~~~~~~-~~~~~~ 95 (293)
T d1p22a2 24 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ----YD---ERVIITGSSDSTVRVWDVNTGEMLN-TLIHHC 95 (293)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEE----CC---SSEEEEEETTSCEEEEESSSCCEEE-EECCCC
T ss_pred cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeee----cc---cceeecccccccccccccccccccc-cccccc
Confidence 36688888999999999999999999997 34443322 11 2467778889998887665543321 111111
Q ss_pred HHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceE
Q 002343 125 YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (934)
Q Consensus 125 ~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (934)
.........++.+..+....+..+.|..++............. . .++. . .. ....+
T Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~v~~-------~--~~-----~~~~~ 151 (293)
T d1p22a2 96 -EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR--------A-AVNV-------V--DF-----DDKYI 151 (293)
T ss_dssp -SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS--------S-CEEE-------E--EE-----ETTEE
T ss_pred -cccccccccccceeecccccceeEeeccccccccccccccccc--------c-cccc-------c--ee-----ccccc
Confidence 1122234445667777777777777877766443333211100 0 0100 0 00 11245
Q ss_pred EEEeeeEEEEEecCCCCceEEEEE
Q 002343 205 YIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 205 ~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
+.+-.|-.|..+|.++++....+.
T Consensus 152 ~~~s~d~~i~~~d~~~~~~~~~~~ 175 (293)
T d1p22a2 152 VSASGDRTIKVWNTSTCEFVRTLN 175 (293)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccccCCCceeeecCCCCcEEEEEc
Confidence 566677788888988888776554
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=85.83 E-value=0.78 Score=44.68 Aligned_cols=150 Identities=13% Similarity=0.147 Sum_probs=90.1
Q ss_pred eEEEE-eeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCcee-ecccCHHHHHh
Q 002343 50 VALVA-ALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-KLSSSAEEYIR 127 (934)
Q Consensus 50 ~~lvs-tldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-klp~ti~e~v~ 127 (934)
.+.|+ .-||+|..+|..||++..++..|.-...- + .+-+...+|+-+..|+++++.+-..+... .++---. .
T Consensus 3 ~~yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~v--a-~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~---~ 76 (301)
T d1l0qa2 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGA--V-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS---P 76 (301)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE--E-ECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS---E
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEECCCCceEE--E-EeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc---c
Confidence 46665 58999999999999999999976543221 1 11122246777778888888776544332 2322100 0
Q ss_pred cCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEE
Q 002343 128 RMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVY 205 (934)
Q Consensus 128 ~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 205 (934)
..-..+.|| .+..+.-...+.+.|..+|+.+......... .| ..+.| +.. .++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~------~~~~~---dg~---~~~~ 132 (301)
T d1l0qa2 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP------------LG------LALSP---DGK---KLYV 132 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE------------EE------EEECT---TSS---EEEE
T ss_pred cccccccccccccccccccceeeecccccceeeeeccccccc------------eE------EEeec---CCC---eeee
Confidence 122456777 3445666678899999999999998754321 11 01111 110 1344
Q ss_pred EEeeeEEEEEecCCCCceEEEEEe
Q 002343 206 IMRTDYVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 206 i~RtdY~v~~~~~~s~~~~WN~t~ 229 (934)
-+..+..+..+|..++.....+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~ 156 (301)
T d1l0qa2 133 TNNGDKTVSVINTVTKAVINTVSV 156 (301)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC
T ss_pred eeccccceeeeeccccceeeeccc
Confidence 555567777778877776665543
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.17 E-value=2.4 Score=40.57 Aligned_cols=153 Identities=14% Similarity=0.091 Sum_probs=86.8
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-----------
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM----------- 115 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~----------- 115 (934)
....+++.+-||+++..|..+|+...++........... -......++-...||.++......+..
T Consensus 112 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i 188 (317)
T d1vyhc1 112 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR---PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV 188 (317)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE---ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCceEEeeccCcceeEeecccceeeeEEccCCCcceeee---cccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCc
Confidence 467788899999999999999999998874332211111 111224555667788877766543322
Q ss_pred eecccCHHH---HHh------cCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCc
Q 002343 116 KKLSSSAEE---YIR------RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGY 186 (934)
Q Consensus 116 ~klp~ti~e---~v~------~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (934)
..+-|+... .+. ..........+++|+...++.+-|..+|+.++++..... . ...++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~--------v~~~~----- 254 (317)
T d1vyhc1 189 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-W--------VRGVL----- 254 (317)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-C--------EEEEE-----
T ss_pred eEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCC-C--------EEEEE-----
Confidence 112121110 000 001111223578888888999999999999999864321 0 00011
Q ss_pred cccccccCCccccccceEEEEeeeEEEEEecCCCCceEEE
Q 002343 187 EELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWN 226 (934)
Q Consensus 187 ~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN 226 (934)
..|. ...|..+-.|=+|..+|..+++....
T Consensus 255 ---~~~~-------~~~l~s~~~dg~i~iwd~~~~~~~~~ 284 (317)
T d1vyhc1 255 ---FHSG-------GKFILSCADDKTLRVWDYKNKRCMKT 284 (317)
T ss_dssp ---ECSS-------SSCEEEEETTTEEEEECCTTSCCCEE
T ss_pred ---ECCC-------CCEEEEEECCCeEEEEECCCCcEEEE
Confidence 1111 12556666677777888777766543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.29 E-value=1.7 Score=44.06 Aligned_cols=154 Identities=12% Similarity=0.093 Sum_probs=86.4
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccc------cccC---------CCCccccccCCCCceeEEecccc
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ------ASFN---------SNASEFYLDVDEDWELYFHSKRF 112 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~------~~~~---------~~~~~~~l~~~~d~~ly~~~~~~ 112 (934)
+.++ ++.-||+|+..|..+|+..-++........... .... .++...++-+..||.+.+.+...
T Consensus 74 g~~l-asg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~ 152 (388)
T d1erja_ 74 GEYL-ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152 (388)
T ss_dssp SSEE-EEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCEE-EEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecccccccccccccc
Confidence 4454 455699999999999999888875433211000 0000 00112445566777777766554
Q ss_pred CceeecccCHHHHHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCcccccc
Q 002343 113 GKMKKLSSSAEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVE 191 (934)
Q Consensus 113 g~~~klp~ti~e~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (934)
+........-.+-| .+.+.+.+| .+++|+....+.+.|.+++..+......... .|- ...
T Consensus 153 ~~~~~~~~~h~~~v-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------------~~~------~~~ 213 (388)
T d1erja_ 153 RKIVMILQGHEQDI-YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV------------TTV------AVS 213 (388)
T ss_dssp TEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE------------EEE------EEC
T ss_pred cccccccccccccc-cccccccccccccccccceeeeeeecccccccccccccccc------------ccc------ccc
Confidence 43322211100001 123345555 6788888899999999999998887653321 110 011
Q ss_pred ccCCccccccceEEEEeeeEEEEEecCCCCceEEEE
Q 002343 192 SGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 192 ~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
|.. ...|..+-.|-.|..+|..++...+.+
T Consensus 214 ~~~------~~~l~~~~~d~~i~i~~~~~~~~~~~~ 243 (388)
T d1erja_ 214 PGD------GKYIAAGSLDRAVRVWDSETGFLVERL 243 (388)
T ss_dssp STT------CCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCC------CCeEEEEcCCCeEEEeecccCccceee
Confidence 111 126777777888888888888776654
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=83.63 E-value=6 Score=39.08 Aligned_cols=133 Identities=10% Similarity=0.002 Sum_probs=78.8
Q ss_pred CCCCCeEEEEe-----eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCceeecc
Q 002343 45 PPEPDVALVAA-----LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLS 119 (934)
Q Consensus 45 ~~~~~~~lvst-----ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp 119 (934)
+|....++|+. .+++++.+|..||++.+++..|..-. ..|= ||.-.||+-+...
T Consensus 10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~------------~a~S--pDg~~l~v~~~~~------- 68 (355)
T d2bbkh_ 10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN------------PVVA--DDGSFIAHASTVF------- 68 (355)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE------------EEEC--TTSSCEEEEEEEE-------
T ss_pred CCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCc------------eEEc--CCCCEEEEEeCCC-------
Confidence 34555666664 56789999999999999997553210 1231 3333466542211
Q ss_pred cCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCcccc
Q 002343 120 SSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (934)
Q Consensus 120 ~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (934)
..++.|.+.+++.++|+.||+.+.+........ ..+..+-. ...+.|.-
T Consensus 69 ----------------~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~-~~~~~~~~---------~~~~s~dg----- 117 (355)
T d2bbkh_ 69 ----------------SRIARGERTDYVEVFDPVTLLPTADIELPDAPR-FLVGTYPW---------MTSLTPDG----- 117 (355)
T ss_dssp ----------------EETTEEEEEEEEEEECTTTCCEEEEEEETTCCC-CCBSCCGG---------GEEECTTS-----
T ss_pred ----------------ccccccCCCCEEEEEECCCCCEEEEEecCCcce-eecCCCCc---------eEEEecCC-----
Confidence 123447788899999999999999987654321 01110000 01111111
Q ss_pred ccceEEEEe--eeEEEEEecCCCCceEEEEEeee
Q 002343 200 IRQLVYIMR--TDYVLQSTSQDSGEVLWNVAYAD 231 (934)
Q Consensus 200 ~~~~i~i~R--tdY~v~~~~~~s~~~~WN~t~~~ 231 (934)
..+|+.. .+..+..+|..+++..-.+....
T Consensus 118 --~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (355)
T d2bbkh_ 118 --KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 149 (355)
T ss_dssp --SEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred --CeeEEecCCCCceeeeeecCCCcEeeEEecCC
Confidence 1456554 35677788888888887766544
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=83.39 E-value=2.7 Score=42.05 Aligned_cols=159 Identities=9% Similarity=-0.022 Sum_probs=88.9
Q ss_pred CCeEEEEee--CCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 48 PDVALVAAL--DGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 48 ~~~~lvstl--dG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
+..+++++- |..++..|..+++..+++.. ..++.+- . +.. +....++-+.+||.+++.+.+.+......-.-..
T Consensus 114 ~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v-~-~~~-~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~ 190 (311)
T d1nr0a1 114 SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSV-D-FKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190 (311)
T ss_dssp SCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEE-E-ECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccccc-c-ccc-cceeeecccccccccccccccccccccccccccc
Confidence 444554443 34577778888888877763 1223221 1 111 1223466677899998887665544222111000
Q ss_pred HHhcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccc-cccccCCccccccc
Q 002343 125 YIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEE-LVESGVGNLKRIRQ 202 (934)
Q Consensus 125 ~v~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 202 (934)
-| .+-+.++|| .+++|+...++.+-|..+|+.+.++....... ......... ..+| + ..
T Consensus 191 ~i-~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-----------~~h~~~V~~~~~s~---~----~~ 251 (311)
T d1nr0a1 191 FV-HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN-----------VAHSGSVFGLTWSP---D----GT 251 (311)
T ss_dssp CE-EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS-----------CSSSSCEEEEEECT---T----SS
T ss_pred cc-cccccCcccccccccccccccccccccccccccccccccccc-----------ccccccccccccCC---C----CC
Confidence 00 122456676 56679999999999999999999876432110 000000000 1111 1 12
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEEE
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
.|+.+-.|-+|..+|..+|+..-.+.
T Consensus 252 ~l~tgs~Dg~v~iwd~~t~~~~~~l~ 277 (311)
T d1nr0a1 252 KIASASADKTIKIWNVATLKVEKTIP 277 (311)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEE
Confidence 67777778889999988888765443
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.10 E-value=4.8 Score=40.13 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=73.5
Q ss_pred CeEEEEeeCCeEEEEecCCCeeeeEecCCC----ceeeccccccCCCCccccccCCCCceeEEeccccCceeecccCHHH
Q 002343 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGR----PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (934)
Q Consensus 49 ~~~lvstldG~~~~v~~~sg~~~W~~~~~~----~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~klp~ti~e 124 (934)
..+++++.||+++..|..+++..-++.... ++.+- ++.. +....++-...||.+++.+.+.|...+. +.-++
T Consensus 173 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v--~~~p-d~~~~l~s~~~d~~i~iwd~~~~~~~~~-l~~~~ 248 (325)
T d1pgua1 173 MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV--EFSP-DSGEFVITVGSDRKISCFDGKSGEFLKY-IEDDQ 248 (325)
T ss_dssp CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE--EECS-TTCCEEEEEETTCCEEEEETTTCCEEEE-CCBTT
T ss_pred ceEEEeecccccccccccccccceecccccCCCCccEEe--eecc-ccceeccccccccceeeeeecccccccc-ccccc
Confidence 356668889999999999998887776532 23221 1111 1224667788999999987766654321 11110
Q ss_pred HHhcCCeee---cCC-ceEeeceeeEEEEEeCCCceEEEEEecCC
Q 002343 125 YIRRMPYIS---KDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 125 ~v~~sP~~s---~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
---.+...+ +|| .+.+|+...++.+-|..||+.++++....
T Consensus 249 ~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 293 (325)
T d1pgua1 249 EPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293 (325)
T ss_dssp BCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred cccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecC
Confidence 000122233 566 78889998999999999999999998644
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=82.97 E-value=2.8 Score=41.03 Aligned_cols=148 Identities=11% Similarity=-0.021 Sum_probs=77.1
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCC-------C--------------ccccccCCCCceeE
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSN-------A--------------SEFYLDVDEDWELY 106 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~-------~--------------~~~~l~~~~d~~ly 106 (934)
...++++ ++.++.+|..+++..+++..+........ ..+.. . .........++.++
T Consensus 146 g~~l~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (337)
T d1pbyb_ 146 GSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYA-QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL 222 (337)
T ss_dssp SSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBC-CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEE
T ss_pred CCEEEEE--cCCcceeeeecCcEEEEeecCCcccccee-cCCcceeeccccccceeeeeeeeeeeccceeeecccCccEE
Confidence 4445544 57788899999999999876443221100 00000 0 00111222233444
Q ss_pred EeccccCceeecccCHHHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCc
Q 002343 107 FHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGY 186 (934)
Q Consensus 107 ~~~~~~g~~~klp~ti~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (934)
......|......+.-.......-..+.|+....+. ..++.++|.+||+.+++...... . .|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~d~~~~~~~~~~~~~~~-~-----------~~~---- 285 (337)
T d1pbyb_ 223 TMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHS-Y-----------YSV---- 285 (337)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSC-C-----------CEE----
T ss_pred EEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc-cccEEEEECCCCcEEEEEcCCCC-E-----------EEE----
Confidence 444444433222111100011122345566444333 36788899999999999875432 1 110
Q ss_pred cccccccCCccccccceEEEEeeeEEEEEecCCCCceE
Q 002343 187 EELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVL 224 (934)
Q Consensus 187 ~~~~~~~~~~~~~~~~~i~i~RtdY~v~~~~~~s~~~~ 224 (934)
-+.| + ...||++-.+=+|..+|.++++..
T Consensus 286 --~~s~---d----G~~l~v~~~~~~i~v~D~~t~~~v 314 (337)
T d1pbyb_ 286 --NVST---D----GSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp --EECT---T----SCEEEEESBSSEEEEEETTTCCEE
T ss_pred --EECC---C----CCEEEEEeCCCcEEEEECCCCcEE
Confidence 0111 1 127899999989999999888753
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=82.97 E-value=2.1 Score=42.07 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=50.4
Q ss_pred eeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEEeee
Q 002343 131 YISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTD 210 (934)
Q Consensus 131 ~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~Rtd 210 (934)
+.++||..++-.-.+.+.+.|..||+.+++........ .++ +.| + ...||++=.|
T Consensus 258 ~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~----------~va--------~s~----D---G~~l~v~~~d 312 (346)
T d1jmxb_ 258 LRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYY----------CVA--------FDK----K---GDKLYLGGTF 312 (346)
T ss_dssp EECSSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCC----------EEE--------ECS----S---SSCEEEESBS
T ss_pred EEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCCCEE----------EEE--------EcC----C---CCEEEEEeCC
Confidence 34445544443445678999999999999987543110 011 111 1 1278999899
Q ss_pred EEEEEecCCCCceEEEEEe
Q 002343 211 YVLQSTSQDSGEVLWNVAY 229 (934)
Q Consensus 211 Y~v~~~~~~s~~~~WN~t~ 229 (934)
-.|..+|..+++....+..
T Consensus 313 ~~v~v~D~~t~~~i~~i~~ 331 (346)
T d1jmxb_ 313 NDLAVFNPDTLEKVKNIKL 331 (346)
T ss_dssp SEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEECccCCEEEEEEC
Confidence 9999999999999998776
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=82.43 E-value=3.4 Score=39.68 Aligned_cols=113 Identities=11% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCCeEEEEe-eCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCceeEEeccccCce-eecccCHHH
Q 002343 47 EPDVALVAA-LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (934)
Q Consensus 47 ~~~~~lvst-ldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~-~klp~ti~e 124 (934)
....++|+. -||+|+.+|..+++...++..+.-...- ....+....++.+..|+.++......+.. ..++..-
T Consensus 42 dG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 116 (301)
T d1l0qa2 42 DGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGV---AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-- 116 (301)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEE---EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--
T ss_pred CCCEEEEEECCCCEEEEEECCCCceeeeeecccccccc---ccccccccccccccccceeeecccccceeeeeccccc--
Confidence 456666654 6899999999999999999865443221 12222234666677777777766544432 2222211
Q ss_pred HHhcCCeeecCC--ceEeeceeeEEEEEeCCCceEEEEEecCC
Q 002343 125 YIRRMPYISKDG--GVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 125 ~v~~sP~~s~Dg--~~~~G~k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
....-+.++|| +++.+....+..+.|..|++.+.++....
T Consensus 117 -~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (301)
T d1l0qa2 117 -SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (301)
T ss_dssp -SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred -cceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCC
Confidence 01345677888 45567778889999999999999887543
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.41 E-value=3.4 Score=40.28 Aligned_cols=153 Identities=9% Similarity=0.002 Sum_probs=89.3
Q ss_pred CCCeEEEEeeCCeEEEEecCCCeeeeEecC-CCceeeccccccCCCCccccccCCCCceeEEeccccCcee-e--cccCH
Q 002343 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK-K--LSSSA 122 (934)
Q Consensus 47 ~~~~~lvstldG~~~~v~~~sg~~~W~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~-k--lp~ti 122 (934)
...++++++.||+|+..|..+|+...++.. ..+|.+-. +. ++...++-...|+.+........... + ..+.-
T Consensus 66 ~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~--~~--~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 141 (340)
T d1tbga_ 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA--YA--PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEE--EC--TTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECC
T ss_pred CCCEEEEEECCCceeeeecccceeEEEEecccccEEeeE--ee--ccceeeeeecccceeecccccccccccccceeccc
Confidence 577888899999999999999999999873 33443321 11 12234555667777666543221110 0 01111
Q ss_pred HHHHhcCCeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccc
Q 002343 123 EEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (934)
Q Consensus 123 ~e~v~~sP~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (934)
..-+........++.+..+....+....+..+............. ++. ..... ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~---------~~~~~---~~~ 197 (340)
T d1tbga_ 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD------------VMS---------LSLAP---DTR 197 (340)
T ss_dssp CSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSC------------EEE---------EEECT---TSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccee------------Eee---------ecccc---ccc
Confidence 111122334445666777777777778888877777666543211 100 00000 113
Q ss_pred eEEEEeeeEEEEEecCCCCceEEEE
Q 002343 203 LVYIMRTDYVLQSTSQDSGEVLWNV 227 (934)
Q Consensus 203 ~i~i~RtdY~v~~~~~~s~~~~WN~ 227 (934)
.+..+-.|..|..+|..+++....+
T Consensus 198 ~~~~~~~d~~v~i~d~~~~~~~~~~ 222 (340)
T d1tbga_ 198 LFVSGACDASAKLWDVREGMCRQTF 222 (340)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEE
T ss_pred eeEEeecCceEEEEECCCCcEEEEE
Confidence 6777888899999999888877654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=82.14 E-value=2.9 Score=41.44 Aligned_cols=112 Identities=11% Similarity=-0.013 Sum_probs=69.5
Q ss_pred CCeEEEEeeCCeEEEEecCCCeeeeEecCCCceeeccccccCCCCccccccCCCCc-eeEEeccccCceeecccCHHHHH
Q 002343 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDW-ELYFHSKRFGKMKKLSSSAEEYI 126 (934)
Q Consensus 48 ~~~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~~~~~~~~~~~~~~~l~~~~d~-~ly~~~~~~g~~~klp~ti~e~v 126 (934)
++-+++.+-+|.|+.+|..+|.++-... +..+... ++..+.+ .++.-..++| .++..+...|.++++--....
T Consensus 14 dG~~~a~~~~g~v~v~d~~~~~~~~~~~-~~~v~~~--~~spDg~-~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~-- 87 (360)
T d1k32a3 14 DGDLIAFVSRGQAFIQDVSGTYVLKVPE-PLRIRYV--RRGGDTK-VAFIHGTREGDFLGIYDYRTGKAEKFEENLGN-- 87 (360)
T ss_dssp GGGCEEEEETTEEEEECTTSSBEEECSC-CSCEEEE--EECSSSE-EEEEEEETTEEEEEEEETTTCCEEECCCCCCS--
T ss_pred CCCEEEEEECCeEEEEECCCCcEEEccC-CCCEEEE--EECCCCC-EEEEEEcCCCCEEEEEECCCCcEEEeeCCCce--
Confidence 4455566778999999999998886543 3334432 1122211 2222222333 566665566666554221111
Q ss_pred hcCCeeecCC-ceEeeceeeEEEEEeCCCceEEEEEecCC
Q 002343 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (934)
Q Consensus 127 ~~sP~~s~Dg-~~~~G~k~~t~f~vd~~tG~~~~~~~~~~ 165 (934)
-.+.+.|+|| .+.+|+...+.+++|..+|+..+.+....
T Consensus 88 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (360)
T d1k32a3 88 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 127 (360)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred EEeeeecccccccceeccccccccccccccceeeeeeccc
Confidence 1345689999 67788888999999999999999987544
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.89 E-value=10 Score=38.57 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=55.7
Q ss_pred CeeecCCceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCCccccccccCCccccccceEEEE--
Q 002343 130 PYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM-- 207 (934)
Q Consensus 130 P~~s~Dg~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~-- 207 (934)
-.+|+||.+.+|+..-++.+-|.+||+.++++.....- ..-... +.. ..+.| + ...|..+
T Consensus 190 v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l-----~~h~~~-V~~-----l~~sp---d----g~~l~sgs~ 251 (393)
T d1sq9a_ 190 VDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSM-----INNSNS-IRS-----VKFSP---Q----GSLLAIAHD 251 (393)
T ss_dssp EEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC--------CCCCC-EEE-----EEECS---S----TTEEEEEEE
T ss_pred EEECCCCEEEEEeCCCcEEEEeeccccccccccccccc-----ccccce-EEE-----ccccc---c----cceeeeecC
Confidence 35678999999999999999999999999988643210 000000 000 00111 1 1267777
Q ss_pred -eeeEEEEEecCCCCceEEEEEeee
Q 002343 208 -RTDYVLQSTSQDSGEVLWNVAYAD 231 (934)
Q Consensus 208 -RtdY~v~~~~~~s~~~~WN~t~~~ 231 (934)
+|...|..+|..+|+..++++...
T Consensus 252 D~t~~~i~lwd~~~g~~~~~l~~~~ 276 (393)
T d1sq9a_ 252 SNSFGCITLYETEFGERIGSLSVPT 276 (393)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC-
T ss_pred CCCcceeeecccccceeeeeecccc
Confidence 566889999999999999886543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=80.77 E-value=2 Score=43.36 Aligned_cols=38 Identities=24% Similarity=0.214 Sum_probs=30.1
Q ss_pred CCeeecCCc--eE-eeceeeEEEEEeCCCceEEEEEecCCC
Q 002343 129 MPYISKDGG--VT-LGAMKTSVFLVDVKSGRVVDNYVLDFS 166 (934)
Q Consensus 129 sP~~s~Dg~--~~-~G~k~~t~f~vd~~tG~~~~~~~~~~~ 166 (934)
+..+|+||- +| +|+-..++.++|..||+.++++...+.
T Consensus 322 ~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~ 362 (373)
T d2madh_ 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS 362 (373)
T ss_pred EEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCC
Confidence 456788884 44 678888999999999999999975543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=80.70 E-value=5.5 Score=39.89 Aligned_cols=155 Identities=11% Similarity=-0.024 Sum_probs=83.8
Q ss_pred eEEEEeeCCeEEEEecCCCeeeeEecCCCceee--ccccccCCCCccccccCCCCceeEEeccccCcee---ecccCHHH
Q 002343 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYS--SYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK---KLSSSAEE 124 (934)
Q Consensus 50 ~~lvstldG~~~~v~~~sg~~~W~~~~~~~i~~--~~~~~~~~~~~~~~l~~~~d~~ly~~~~~~g~~~---klp~ti~e 124 (934)
+.++..-||+++.+|..++++.|.+........ +............++-.+.|+.++......+... .+......
T Consensus 179 ~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 258 (373)
T d2madh_ 179 TFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGG 258 (373)
T ss_pred EEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCc
Confidence 445667899999999999999998864222111 0000000011134555667777776554333211 11111110
Q ss_pred H--HhcC------CeeecCC-----------ceEeeceeeEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCccccCCC
Q 002343 125 Y--IRRM------PYISKDG-----------GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDG 185 (934)
Q Consensus 125 ~--v~~s------P~~s~Dg-----------~~~~G~k~~t~f~vd~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (934)
. +..+ -..+.|| .+..+....++.++|..||+.+..+....... .+
T Consensus 259 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~----------~~----- 323 (373)
T d2madh_ 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVD----------AI----- 323 (373)
T ss_pred EEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCee----------EE-----
Confidence 0 0111 1334444 22334455678899999999999876432110 01
Q ss_pred ccccccccCCccccccceEE-EEeeeEEEEEecCCCCceEEEEE
Q 002343 186 YEELVESGVGNLKRIRQLVY-IMRTDYVLQSTSQDSGEVLWNVA 228 (934)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~i~-i~RtdY~v~~~~~~s~~~~WN~t 228 (934)
-+.| +.+ .++| -++.|=+|.-+|..+|++.-.+.
T Consensus 324 ---a~sp---DG~---~~l~vt~~~d~~v~v~D~~tg~~~~~~~ 358 (373)
T d2madh_ 324 ---SVAQ---DGG---PDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred ---EECC---CCC---EEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence 1111 111 2455 46788899999999999987665
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