Query 002346
Match_columns 933
No_of_seqs 785 out of 6167
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 21:58:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002346.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002346hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 8.1E-84 1.7E-88 813.0 62.4 790 9-865 11-954 (968)
2 KOG1187 Serine/threonine prote 100.0 1.7E-52 3.8E-57 457.2 28.5 290 567-863 61-353 (361)
3 KOG0581 Mitogen-activated prot 100.0 2.7E-46 5.9E-51 382.1 20.2 250 584-857 82-334 (364)
4 KOG0192 Tyrosine kinase specif 100.0 6.5E-45 1.4E-49 393.9 28.1 260 584-867 44-308 (362)
5 KOG0575 Polo-like serine/threo 100.0 7.2E-45 1.6E-49 392.8 24.5 249 581-857 18-268 (592)
6 KOG0591 NIMA (never in mitosis 100.0 2.6E-46 5.6E-51 364.4 8.5 262 581-861 19-284 (375)
7 KOG0595 Serine/threonine-prote 100.0 1E-44 2.2E-49 373.1 20.7 206 580-795 9-221 (429)
8 KOG0615 Serine/threonine prote 100.0 8.3E-45 1.8E-49 372.6 15.8 261 579-870 170-443 (475)
9 KOG0197 Tyrosine kinases [Sign 100.0 8E-44 1.7E-48 381.7 20.9 253 585-864 210-463 (468)
10 KOG1026 Nerve growth factor re 100.0 3.5E-43 7.7E-48 394.6 22.7 261 581-863 486-763 (774)
11 KOG0598 Ribosomal protein S6 k 100.0 1.3E-43 2.8E-48 362.5 17.1 243 580-850 24-269 (357)
12 KOG0582 Ste20-like serine/thre 100.0 1.8E-41 4E-46 351.3 23.0 262 580-857 25-292 (516)
13 KOG0600 Cdc2-related protein k 100.0 7.9E-42 1.7E-46 359.4 19.2 270 580-857 116-399 (560)
14 KOG0592 3-phosphoinositide-dep 100.0 1.4E-41 3E-46 360.5 21.1 251 580-857 72-337 (604)
15 KOG0597 Serine-threonine prote 100.0 1.2E-41 2.5E-46 360.3 18.6 248 581-857 2-250 (808)
16 KOG0196 Tyrosine kinase, EPH ( 100.0 6.4E-42 1.4E-46 375.2 15.0 281 559-865 607-894 (996)
17 KOG0593 Predicted protein kina 100.0 1.3E-41 2.8E-46 335.1 15.2 267 581-857 2-283 (396)
18 KOG0198 MEKK and related serin 100.0 1E-40 2.2E-45 349.3 19.0 252 581-857 17-275 (313)
19 KOG0616 cAMP-dependent protein 100.0 1.8E-40 3.8E-45 326.8 17.3 238 581-849 44-283 (355)
20 KOG0193 Serine/threonine prote 100.0 9.8E-41 2.1E-45 358.3 16.7 267 574-865 385-656 (678)
21 KOG0578 p21-activated serine/t 100.0 8.7E-41 1.9E-45 358.3 15.9 250 580-857 272-522 (550)
22 KOG0583 Serine/threonine prote 100.0 5.9E-40 1.3E-44 359.3 22.9 258 579-869 15-280 (370)
23 KOG0659 Cdk activating kinase 100.0 8.6E-40 1.9E-44 317.3 19.9 266 581-857 2-280 (318)
24 KOG0661 MAPK related serine/th 100.0 1.9E-40 4.1E-45 346.5 16.2 263 579-857 8-290 (538)
25 KOG0201 Serine/threonine prote 100.0 4.3E-41 9.4E-46 348.8 10.6 249 581-857 13-262 (467)
26 KOG0588 Serine/threonine prote 100.0 8.7E-40 1.9E-44 353.7 19.5 248 581-857 12-262 (786)
27 KOG1094 Discoidin domain recep 100.0 5.5E-39 1.2E-43 341.2 24.9 268 577-862 534-804 (807)
28 KOG0605 NDR and related serine 100.0 4.1E-39 9E-44 342.5 22.1 253 580-857 140-444 (550)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 7E-39 1.5E-43 355.7 24.8 264 580-864 6-336 (338)
30 KOG1095 Protein tyrosine kinas 100.0 4.1E-39 8.8E-44 375.4 22.2 266 581-868 692-967 (1025)
31 KOG0694 Serine/threonine prote 100.0 5.4E-39 1.2E-43 351.0 20.2 244 580-852 367-613 (694)
32 KOG0033 Ca2+/calmodulin-depend 100.0 2.7E-40 5.9E-45 315.8 8.3 253 580-857 10-266 (355)
33 KOG0194 Protein tyrosine kinas 100.0 5.8E-39 1.3E-43 350.7 18.5 260 582-867 158-425 (474)
34 cd05096 PTKc_DDR1 Catalytic do 100.0 9.6E-38 2.1E-42 341.2 27.2 266 580-860 4-303 (304)
35 PLN00113 leucine-rich repeat r 100.0 2.8E-38 6.1E-43 399.1 25.3 384 66-452 212-610 (968)
36 KOG3653 Transforming growth fa 100.0 1.3E-37 2.8E-42 325.1 25.6 268 583-867 212-508 (534)
37 PTZ00263 protein kinase A cata 100.0 2E-38 4.2E-43 349.9 20.4 246 581-857 18-270 (329)
38 PHA02988 hypothetical protein; 100.0 8.8E-38 1.9E-42 336.9 25.0 248 586-862 25-279 (283)
39 KOG0611 Predicted serine/threo 100.0 1.9E-38 4.1E-43 322.8 18.5 251 579-859 51-304 (668)
40 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-38 7.1E-43 342.0 21.6 269 581-857 1-283 (287)
41 KOG0580 Serine/threonine prote 100.0 4.4E-39 9.4E-44 308.0 12.5 249 581-857 22-272 (281)
42 KOG0585 Ca2+/calmodulin-depend 100.0 2.8E-38 6.2E-43 329.5 19.4 262 570-857 86-371 (576)
43 KOG4721 Serine/threonine prote 100.0 3E-39 6.4E-44 341.5 11.8 251 568-862 118-368 (904)
44 cd05612 STKc_PRKX_like Catalyt 100.0 3.6E-38 7.8E-43 341.9 19.4 246 581-857 1-253 (291)
45 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-37 3.2E-42 348.5 24.8 262 580-862 34-374 (375)
46 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-37 3.2E-42 348.2 24.6 263 580-863 37-373 (374)
47 cd05631 STKc_GRK4 Catalytic do 100.0 8.9E-38 1.9E-42 337.8 21.9 253 582-857 1-260 (285)
48 KOG0663 Protein kinase PITSLRE 100.0 7.7E-38 1.7E-42 312.7 19.3 267 582-869 77-366 (419)
49 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-37 5.2E-42 331.1 24.5 257 580-862 4-265 (266)
50 KOG2052 Activin A type IB rece 100.0 7.8E-38 1.7E-42 324.2 19.6 274 571-863 201-504 (513)
51 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-37 2.3E-42 345.1 21.8 253 582-857 1-266 (332)
52 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-37 3.5E-42 341.9 22.2 243 587-857 1-250 (323)
53 KOG0589 Serine/threonine prote 100.0 7.9E-38 1.7E-42 335.0 18.4 253 581-858 4-258 (426)
54 cd06649 PKc_MEK2 Catalytic dom 100.0 7E-37 1.5E-41 338.0 26.6 202 580-792 4-206 (331)
55 cd05072 PTKc_Lyn Catalytic dom 100.0 6.7E-37 1.4E-41 326.8 24.8 255 580-861 5-260 (261)
56 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.5E-37 9.9E-42 343.1 24.5 253 581-857 1-284 (350)
57 cd05048 PTKc_Ror Catalytic Dom 100.0 6.6E-37 1.4E-41 331.1 24.9 259 581-861 5-282 (283)
58 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.2E-37 1.6E-41 325.5 24.7 251 581-859 4-255 (256)
59 KOG0660 Mitogen-activated prot 100.0 1.7E-37 3.8E-42 316.1 18.8 266 578-857 19-309 (359)
60 cd05601 STKc_CRIK Catalytic do 100.0 2.5E-37 5.4E-42 341.9 21.5 254 581-857 1-262 (330)
61 cd05585 STKc_YPK1_like Catalyt 100.0 2E-37 4.3E-42 339.5 20.5 240 589-856 1-242 (312)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.5E-37 5.5E-42 342.2 21.4 254 581-857 1-256 (333)
63 PTZ00426 cAMP-dependent protei 100.0 2E-37 4.4E-42 342.3 20.5 246 581-857 30-283 (340)
64 cd05584 STKc_p70S6K Catalytic 100.0 4.6E-37 9.9E-42 338.3 22.9 243 587-857 2-255 (323)
65 cd05589 STKc_PKN Catalytic dom 100.0 4.2E-37 9.1E-42 338.9 22.3 241 583-852 1-246 (324)
66 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.7E-37 8.1E-42 333.5 21.1 264 581-857 5-284 (288)
67 PHA03212 serine/threonine kina 100.0 6.9E-37 1.5E-41 343.7 23.9 261 580-857 91-375 (391)
68 cd05595 STKc_PKB_beta Catalyti 100.0 3.6E-37 7.7E-42 338.9 21.2 243 587-857 1-250 (323)
69 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-36 3.1E-41 342.1 26.5 253 582-857 2-304 (381)
70 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-36 2.4E-41 342.0 25.4 263 580-863 36-398 (400)
71 cd05603 STKc_SGK2 Catalytic do 100.0 9.5E-37 2.1E-41 335.7 24.0 239 587-853 1-242 (321)
72 cd05593 STKc_PKB_gamma Catalyt 100.0 5.6E-37 1.2E-41 338.0 22.0 243 587-857 1-250 (328)
73 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-36 2.8E-41 339.7 25.1 258 576-857 38-303 (370)
74 cd07862 STKc_CDK6 Catalytic do 100.0 8.2E-37 1.8E-41 331.6 22.7 266 581-857 1-286 (290)
75 cd05599 STKc_NDR_like Catalyti 100.0 9E-37 2E-41 342.3 23.7 253 581-857 1-295 (364)
76 cd05068 PTKc_Frk_like Catalyti 100.0 2.2E-36 4.8E-41 322.8 25.3 255 580-861 5-260 (261)
77 PLN00034 mitogen-activated pro 100.0 8.7E-37 1.9E-41 340.5 22.9 254 581-869 74-333 (353)
78 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.4E-36 3.1E-41 337.4 24.4 264 582-857 1-289 (338)
79 cd05052 PTKc_Abl Catalytic dom 100.0 2.4E-36 5.2E-41 322.9 25.2 255 581-862 6-262 (263)
80 KOG0594 Protein kinase PCTAIRE 100.0 9E-37 2E-41 312.8 20.6 270 580-857 10-301 (323)
81 KOG2345 Serine/threonine prote 100.0 1.7E-37 3.7E-42 298.2 14.0 264 579-862 19-300 (302)
82 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-36 2.5E-41 333.8 22.6 241 587-855 1-244 (316)
83 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-36 5E-41 338.3 25.4 254 580-857 42-303 (370)
84 cd06650 PKc_MEK1 Catalytic dom 100.0 4E-36 8.7E-41 331.9 26.9 202 580-792 4-206 (333)
85 PTZ00283 serine/threonine prot 100.0 9.6E-37 2.1E-41 352.0 22.8 259 578-858 29-297 (496)
86 KOG1989 ARK protein kinase fam 100.0 1.1E-36 2.4E-41 344.5 22.5 259 580-865 36-314 (738)
87 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-36 3.4E-41 341.6 23.7 253 581-857 1-304 (377)
88 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-36 2.6E-41 332.3 22.0 271 580-868 4-292 (303)
89 cd05054 PTKc_VEGFR Catalytic d 100.0 2.7E-36 5.8E-41 333.5 24.8 264 580-864 6-335 (337)
90 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-37 8.5E-42 338.3 17.7 240 587-854 2-245 (318)
91 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.2E-36 6.9E-41 320.4 24.0 252 581-860 4-256 (256)
92 KOG0577 Serine/threonine prote 100.0 9.2E-38 2E-42 331.6 11.8 245 583-857 28-277 (948)
93 PTZ00267 NIMA-related protein 100.0 1.4E-36 3E-41 351.0 22.7 252 582-857 68-322 (478)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-36 3.7E-41 334.2 22.0 244 587-857 1-251 (325)
95 cd05033 PTKc_EphR Catalytic do 100.0 7.4E-36 1.6E-40 319.7 26.2 256 581-862 4-265 (266)
96 cd05049 PTKc_Trk Catalytic dom 100.0 3.8E-36 8.3E-41 324.6 24.2 258 581-860 5-279 (280)
97 cd05062 PTKc_IGF-1R Catalytic 100.0 3.6E-36 7.9E-41 324.1 23.8 260 579-860 4-276 (277)
98 cd05628 STKc_NDR1 Catalytic do 100.0 3.5E-36 7.7E-41 336.8 24.4 205 581-793 1-241 (363)
99 cd05598 STKc_LATS Catalytic do 100.0 3E-36 6.5E-41 339.4 24.0 253 581-857 1-300 (376)
100 cd05093 PTKc_TrkB Catalytic do 100.0 6.4E-36 1.4E-40 324.0 25.6 261 581-864 5-281 (288)
101 cd07853 STKc_NLK Catalytic dom 100.0 3E-36 6.6E-41 338.7 23.7 264 582-857 1-287 (372)
102 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.8E-36 6E-41 322.1 22.1 256 579-861 4-260 (261)
103 cd05597 STKc_DMPK_like Catalyt 100.0 3.1E-36 6.8E-41 332.6 23.2 256 581-857 1-265 (331)
104 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-36 5.9E-41 332.8 22.6 244 587-852 1-250 (329)
105 cd05075 PTKc_Axl Catalytic dom 100.0 9.4E-36 2E-40 320.1 26.2 259 583-862 1-271 (272)
106 cd05575 STKc_SGK Catalytic dom 100.0 2.4E-36 5.2E-41 332.7 22.1 240 587-854 1-243 (323)
107 PF07714 Pkinase_Tyr: Protein 100.0 9.8E-37 2.1E-41 324.6 18.3 250 585-859 3-259 (259)
108 KOG0658 Glycogen synthase kina 100.0 2.1E-37 4.5E-42 316.2 12.3 260 582-857 25-305 (364)
109 cd05094 PTKc_TrkC Catalytic do 100.0 6.9E-36 1.5E-40 324.3 25.0 261 581-864 5-284 (291)
110 cd05622 STKc_ROCK1 Catalytic d 100.0 5.8E-36 1.3E-40 334.9 25.0 259 575-857 37-303 (371)
111 cd08228 STKc_Nek6 Catalytic do 100.0 8.7E-36 1.9E-40 319.4 25.3 262 581-862 2-265 (267)
112 cd05590 STKc_nPKC_eta Catalyti 100.0 2.2E-36 4.7E-41 332.2 21.2 240 587-854 1-243 (320)
113 cd05071 PTKc_Src Catalytic dom 100.0 7.8E-36 1.7E-40 318.6 24.8 255 580-862 5-260 (262)
114 KOG0032 Ca2+/calmodulin-depend 100.0 7.1E-36 1.5E-40 326.5 24.8 260 578-869 32-298 (382)
115 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.9E-36 1.7E-40 318.3 24.6 255 579-861 4-259 (260)
116 cd05608 STKc_GRK1 Catalytic do 100.0 3.2E-36 6.9E-41 324.8 21.6 249 589-857 1-256 (280)
117 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-35 2.7E-40 319.3 26.2 259 583-862 1-272 (273)
118 cd05045 PTKc_RET Catalytic dom 100.0 9.7E-36 2.1E-40 323.1 25.5 261 582-864 1-288 (290)
119 cd05059 PTKc_Tec_like Catalyti 100.0 8E-36 1.7E-40 317.4 24.4 251 581-859 4-255 (256)
120 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-36 5.5E-41 332.7 21.1 243 582-852 1-246 (324)
121 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.8E-36 1.9E-40 317.9 24.6 254 580-861 5-259 (260)
122 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-36 5.2E-41 332.4 20.7 243 587-857 1-253 (321)
123 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-36 6.2E-41 332.5 21.3 244 587-852 1-250 (329)
124 cd05605 STKc_GRK4_like Catalyt 100.0 3.5E-36 7.6E-41 325.4 21.1 253 582-857 1-260 (285)
125 KOG0610 Putative serine/threon 100.0 2.2E-36 4.8E-41 311.3 18.3 254 581-857 77-391 (459)
126 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-35 2.8E-40 321.0 25.1 259 581-861 5-282 (283)
127 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-35 2.4E-40 322.2 24.5 268 579-868 4-284 (288)
128 KOG0599 Phosphorylase kinase g 100.0 1.3E-36 2.8E-41 294.9 15.2 256 577-857 13-282 (411)
129 cd05116 PTKc_Syk Catalytic dom 100.0 8.9E-36 1.9E-40 317.3 23.3 247 588-861 2-254 (257)
130 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.9E-36 8.5E-41 331.3 21.1 245 587-853 1-249 (327)
131 cd05625 STKc_LATS1 Catalytic d 100.0 5.2E-36 1.1E-40 338.1 22.5 204 582-793 2-253 (382)
132 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-35 2.4E-40 326.7 24.4 257 581-864 7-270 (316)
133 KOG0574 STE20-like serine/thre 100.0 3.9E-38 8.6E-43 308.9 4.4 247 583-857 35-282 (502)
134 cd06625 STKc_MEKK3_like Cataly 100.0 2.2E-35 4.7E-40 315.5 25.9 252 581-857 2-259 (263)
135 cd05620 STKc_nPKC_delta Cataly 100.0 6.9E-36 1.5E-40 327.6 22.5 242 587-856 1-246 (316)
136 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-35 3.3E-40 332.6 25.5 263 580-863 36-400 (401)
137 cd05069 PTKc_Yes Catalytic dom 100.0 1.9E-35 4.2E-40 315.3 25.1 253 581-861 6-259 (260)
138 cd05616 STKc_cPKC_beta Catalyt 100.0 4.3E-36 9.3E-41 330.7 20.6 243 582-852 1-246 (323)
139 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-35 4.9E-40 321.0 26.0 264 581-860 5-294 (295)
140 cd05085 PTKc_Fer Catalytic dom 100.0 3E-35 6.5E-40 311.9 26.2 248 587-860 1-249 (250)
141 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-36 8.4E-41 331.3 20.0 243 587-857 1-246 (325)
142 cd05111 PTK_HER3 Pseudokinase 100.0 2.3E-35 4.9E-40 318.1 25.5 256 581-863 7-269 (279)
143 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-35 2.3E-40 328.4 23.4 256 581-857 1-265 (331)
144 cd08529 STKc_FA2-like Catalyti 100.0 1.8E-35 4E-40 314.7 24.4 251 582-857 1-252 (256)
145 PF00069 Pkinase: Protein kina 100.0 5.1E-36 1.1E-40 319.8 20.1 254 583-857 1-256 (260)
146 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-35 2.8E-40 322.7 23.5 263 579-863 10-292 (293)
147 KOG4279 Serine/threonine prote 100.0 2.3E-36 4.9E-41 326.0 16.9 243 588-857 582-831 (1226)
148 KOG4278 Protein tyrosine kinas 100.0 1.2E-36 2.7E-41 324.0 14.7 257 581-864 267-525 (1157)
149 cd05089 PTKc_Tie1 Catalytic do 100.0 2.6E-35 5.7E-40 320.7 25.6 263 581-867 2-280 (297)
150 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-35 4.9E-40 313.2 24.3 248 587-860 1-251 (252)
151 PRK13184 pknD serine/threonine 100.0 1.6E-35 3.4E-40 348.9 25.1 265 581-864 2-292 (932)
152 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-35 3.5E-40 317.6 23.1 256 587-860 1-268 (269)
153 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.7E-36 1.7E-40 322.7 20.7 269 582-863 4-282 (283)
154 cd05570 STKc_PKC Catalytic dom 100.0 8.5E-36 1.8E-40 327.4 21.2 243 587-857 1-251 (318)
155 cd05619 STKc_nPKC_theta Cataly 100.0 1E-35 2.2E-40 326.1 21.9 242 587-856 1-246 (316)
156 cd05095 PTKc_DDR2 Catalytic do 100.0 2.7E-35 5.8E-40 320.5 24.9 265 581-860 5-295 (296)
157 PTZ00036 glycogen synthase kin 100.0 9.7E-36 2.1E-40 339.8 22.3 263 579-857 64-350 (440)
158 cd08229 STKc_Nek7 Catalytic do 100.0 2.6E-35 5.7E-40 315.7 24.3 262 581-862 2-265 (267)
159 KOG0667 Dual-specificity tyros 100.0 1.9E-35 4E-40 324.0 23.4 200 582-795 187-395 (586)
160 cd05055 PTKc_PDGFR Catalytic d 100.0 3.6E-35 7.7E-40 320.1 25.7 259 580-862 34-301 (302)
161 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.3E-35 7.1E-40 314.9 24.9 262 581-862 2-265 (267)
162 cd05051 PTKc_DDR Catalytic dom 100.0 4.3E-35 9.3E-40 319.1 26.1 266 580-860 4-295 (296)
163 cd07876 STKc_JNK2 Catalytic do 100.0 2.2E-35 4.8E-40 330.1 24.4 266 579-857 19-314 (359)
164 cd05043 PTK_Ryk Pseudokinase d 100.0 3.7E-35 8.1E-40 316.8 25.3 263 580-864 5-278 (280)
165 cd05091 PTKc_Ror2 Catalytic do 100.0 2.1E-35 4.5E-40 319.3 23.2 259 581-861 5-282 (283)
166 cd05034 PTKc_Src_like Catalyti 100.0 3.5E-35 7.6E-40 313.6 24.6 255 580-861 5-260 (261)
167 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.1E-35 6.7E-40 321.8 24.6 264 580-865 17-302 (307)
168 KOG4717 Serine/threonine prote 100.0 3.1E-36 6.8E-41 315.1 15.7 259 580-872 17-278 (864)
169 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.8E-35 8.2E-40 320.7 25.2 263 580-864 14-298 (304)
170 cd05032 PTKc_InsR_like Catalyt 100.0 2.7E-35 5.8E-40 317.5 23.5 259 580-860 5-276 (277)
171 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.7E-35 1E-39 315.4 25.2 259 580-860 5-276 (277)
172 cd05073 PTKc_Hck Catalytic dom 100.0 3.6E-35 7.7E-40 313.2 24.1 255 579-861 4-259 (260)
173 cd05602 STKc_SGK1 Catalytic do 100.0 8.6E-36 1.9E-40 328.6 19.7 244 587-858 1-247 (325)
174 cd06619 PKc_MKK5 Catalytic dom 100.0 4.4E-35 9.5E-40 315.9 24.7 250 581-857 1-252 (279)
175 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-35 6.3E-40 321.1 23.6 261 581-865 7-283 (303)
176 cd05607 STKc_GRK7 Catalytic do 100.0 3.5E-35 7.6E-40 316.2 23.8 256 589-868 1-258 (277)
177 cd05092 PTKc_TrkA Catalytic do 100.0 4.6E-35 9.9E-40 316.0 24.7 258 580-860 4-279 (280)
178 cd05066 PTKc_EphR_A Catalytic 100.0 5.6E-35 1.2E-39 313.0 25.1 256 581-862 4-266 (267)
179 cd07874 STKc_JNK3 Catalytic do 100.0 1.6E-35 3.5E-40 330.8 21.6 267 578-857 14-310 (355)
180 PTZ00284 protein kinase; Provi 100.0 5.3E-35 1.1E-39 338.0 26.5 275 574-869 122-443 (467)
181 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-35 3.1E-40 326.2 20.7 244 582-853 1-247 (323)
182 cd05050 PTKc_Musk Catalytic do 100.0 4.2E-35 9.1E-40 317.8 24.0 260 580-861 4-288 (288)
183 cd06646 STKc_MAP4K5 Catalytic 100.0 2.6E-35 5.5E-40 315.8 21.7 254 580-858 8-265 (267)
184 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-35 7.8E-40 317.5 22.8 253 582-857 1-260 (285)
185 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.2E-35 9.1E-40 326.0 23.8 266 576-857 10-297 (343)
186 cd07875 STKc_JNK1 Catalytic do 100.0 4E-35 8.8E-40 328.7 23.8 266 579-857 22-317 (364)
187 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.5E-35 7.5E-40 326.0 23.0 264 580-864 6-341 (343)
188 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-35 4.8E-40 330.1 21.6 258 581-868 1-297 (360)
189 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-34 2.5E-39 321.0 27.1 263 581-865 12-296 (334)
190 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-35 7.3E-40 318.6 22.3 265 582-857 1-284 (288)
191 cd06615 PKc_MEK Catalytic doma 100.0 4.9E-35 1.1E-39 320.1 23.7 259 581-857 1-286 (308)
192 PTZ00266 NIMA-related protein 100.0 2.7E-35 5.7E-40 348.0 23.1 259 578-857 10-294 (1021)
193 cd06637 STKc_TNIK Catalytic do 100.0 4.2E-35 9.1E-40 315.0 22.8 253 578-857 3-268 (272)
194 cd05109 PTKc_HER2 Catalytic do 100.0 9.6E-35 2.1E-39 313.4 25.6 258 580-864 6-270 (279)
195 cd05063 PTKc_EphR_A2 Catalytic 100.0 8E-35 1.7E-39 312.1 24.9 258 580-863 4-268 (268)
196 cd05630 STKc_GRK6 Catalytic do 100.0 3.3E-35 7.1E-40 317.7 21.9 253 582-857 1-260 (285)
197 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-35 6.5E-40 315.6 21.4 254 588-859 2-267 (269)
198 cd06654 STKc_PAK1 Catalytic do 100.0 7.4E-35 1.6E-39 316.8 24.7 249 581-857 20-269 (296)
199 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-34 2.6E-39 308.4 25.8 248 588-862 2-255 (257)
200 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-35 1.2E-39 322.9 23.9 256 581-857 1-265 (332)
201 cd05112 PTKc_Itk Catalytic dom 100.0 9.8E-35 2.1E-39 309.2 24.6 251 581-859 4-255 (256)
202 cd05060 PTKc_Syk_like Catalyti 100.0 1.3E-34 2.8E-39 308.3 25.4 248 587-862 1-255 (257)
203 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-34 2.4E-39 318.4 25.5 262 581-864 12-295 (314)
204 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.5E-35 5.3E-40 322.9 20.3 266 581-857 6-285 (309)
205 cd07861 STKc_CDK1_euk Catalyti 100.0 7.8E-35 1.7E-39 315.3 23.9 267 582-857 1-281 (285)
206 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-34 2.4E-39 308.7 24.5 250 580-861 5-255 (256)
207 cd05047 PTKc_Tie Catalytic dom 100.0 1.3E-34 2.8E-39 310.7 25.1 253 587-863 1-269 (270)
208 KOG0596 Dual specificity; seri 100.0 6.5E-36 1.4E-40 317.1 14.4 254 580-857 360-626 (677)
209 cd06656 STKc_PAK3 Catalytic do 100.0 6.7E-35 1.5E-39 317.2 22.8 256 580-869 18-274 (297)
210 KOG4257 Focal adhesion tyrosin 100.0 1.5E-35 3.2E-40 316.8 17.1 257 581-864 389-651 (974)
211 PHA03209 serine/threonine kina 100.0 1.1E-34 2.5E-39 323.4 25.2 194 579-790 64-258 (357)
212 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.3E-34 2.9E-39 313.2 24.9 262 581-862 4-283 (284)
213 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-34 3.6E-39 307.4 25.1 252 582-858 1-253 (256)
214 cd08219 STKc_Nek3 Catalytic do 100.0 9.7E-35 2.1E-39 309.0 23.2 250 582-857 1-251 (255)
215 PHA03207 serine/threonine kina 100.0 4.6E-35 1E-39 330.7 21.9 263 579-857 90-374 (392)
216 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.6E-34 3.6E-39 312.4 25.3 263 581-862 4-283 (284)
217 PHA03211 serine/threonine kina 100.0 8.8E-35 1.9E-39 330.0 24.0 262 580-857 168-454 (461)
218 cd05040 PTKc_Ack_like Catalyti 100.0 8.6E-35 1.9E-39 309.8 22.6 249 587-860 1-256 (257)
219 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-34 2.6E-39 313.5 24.0 256 581-858 5-266 (284)
220 cd05065 PTKc_EphR_B Catalytic 100.0 1.4E-34 3E-39 310.4 23.9 256 581-862 4-268 (269)
221 cd06631 STKc_YSK4 Catalytic do 100.0 2.1E-34 4.6E-39 308.3 25.2 252 582-857 1-261 (265)
222 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-34 3.4E-39 307.6 24.0 248 581-861 6-255 (256)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-34 5.1E-39 308.3 25.1 250 582-857 1-263 (267)
224 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-34 4.1E-39 310.5 24.5 259 581-860 5-274 (275)
225 cd06609 STKc_MST3_like Catalyt 100.0 2E-34 4.2E-39 310.1 24.5 249 581-857 1-250 (274)
226 cd05056 PTKc_FAK Catalytic dom 100.0 1.4E-34 3E-39 310.6 22.9 258 580-864 5-267 (270)
227 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-34 3E-39 313.5 23.0 268 581-857 1-282 (286)
228 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-34 2.9E-39 319.6 23.3 259 585-857 2-306 (327)
229 cd06655 STKc_PAK2 Catalytic do 100.0 1E-34 2.2E-39 315.5 22.0 249 581-857 19-268 (296)
230 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-34 2.2E-39 311.1 21.5 252 581-857 9-264 (267)
231 cd07868 STKc_CDK8 Catalytic do 100.0 1.8E-34 3.9E-39 317.4 24.1 198 586-791 6-219 (317)
232 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-34 4.7E-39 306.7 23.9 251 582-857 1-253 (257)
233 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-34 3E-39 313.5 22.7 263 571-857 8-282 (286)
234 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2E-34 4.3E-39 307.5 23.4 239 587-859 1-261 (262)
235 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-34 3.8E-39 309.3 23.0 254 587-859 1-266 (268)
236 cd00192 PTKc Catalytic domain 100.0 1.9E-34 4.1E-39 307.9 23.1 252 587-860 1-262 (262)
237 cd08528 STKc_Nek10 Catalytic d 100.0 3.8E-34 8.3E-39 307.0 25.5 257 582-860 1-268 (269)
238 cd06624 STKc_ASK Catalytic dom 100.0 1.5E-34 3.2E-39 310.0 22.3 254 578-857 5-264 (268)
239 cd07839 STKc_CDK5 Catalytic do 100.0 7.5E-35 1.6E-39 315.2 20.0 265 582-857 1-280 (284)
240 cd05586 STKc_Sck1_like Catalyt 100.0 1E-34 2.2E-39 320.9 21.2 238 589-853 1-244 (330)
241 KOG0579 Ste20-like serine/thre 100.0 6.3E-36 1.4E-40 319.2 11.0 250 582-857 33-288 (1187)
242 cd06643 STKc_SLK Catalytic dom 100.0 4.5E-34 9.8E-39 308.7 25.3 249 583-857 7-261 (282)
243 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-34 3E-39 315.8 21.5 269 581-868 6-290 (301)
244 cd07832 STKc_CCRK Catalytic do 100.0 1.7E-34 3.6E-39 312.9 22.0 265 582-857 1-281 (286)
245 cd07833 STKc_CDKL Catalytic do 100.0 1E-34 2.2E-39 314.9 20.2 266 581-857 1-284 (288)
246 cd08218 STKc_Nek1 Catalytic do 100.0 2.9E-34 6.2E-39 305.5 23.3 251 582-857 1-252 (256)
247 cd05041 PTKc_Fes_like Catalyti 100.0 5.5E-34 1.2E-38 302.4 25.4 248 587-860 1-250 (251)
248 PHA03210 serine/threonine kina 100.0 1.4E-34 3.1E-39 335.2 22.3 276 578-857 145-453 (501)
249 cd06612 STKc_MST1_2 Catalytic 100.0 2E-34 4.3E-39 306.8 21.8 249 581-857 3-252 (256)
250 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.5E-34 5.4E-39 311.1 22.7 263 581-862 4-283 (284)
251 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-34 4.2E-39 309.7 21.7 238 588-859 2-273 (274)
252 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-34 6.3E-39 307.5 22.9 258 581-857 1-263 (267)
253 cd06644 STKc_STK10_LOK Catalyt 100.0 6.8E-34 1.5E-38 308.9 26.1 251 581-857 12-268 (292)
254 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.7E-34 1E-38 307.0 24.6 259 583-862 1-272 (273)
255 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.8E-34 3.9E-39 310.9 21.3 249 581-858 4-253 (277)
256 cd08217 STKc_Nek2 Catalytic do 100.0 4.9E-34 1.1E-38 305.3 24.5 256 582-857 1-261 (265)
257 KOG0199 ACK and related non-re 100.0 3E-35 6.4E-40 318.4 15.0 250 584-859 113-369 (1039)
258 cd06651 STKc_MEKK3 Catalytic d 100.0 6E-34 1.3E-38 304.9 25.1 251 581-857 2-260 (266)
259 cd05058 PTKc_Met_Ron Catalytic 100.0 4E-34 8.7E-39 305.6 23.6 251 587-863 1-260 (262)
260 cd05057 PTKc_EGFR_like Catalyt 100.0 9.1E-34 2E-38 305.8 26.5 257 581-864 7-270 (279)
261 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.6E-34 5.6E-39 311.3 22.2 254 581-857 1-261 (286)
262 cd06632 STKc_MEKK1_plant Catal 100.0 5.7E-34 1.2E-38 303.6 24.5 249 582-857 1-254 (258)
263 cd06640 STKc_MST4 Catalytic do 100.0 3.3E-34 7.2E-39 308.8 22.8 248 581-857 4-252 (277)
264 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.8E-35 2.1E-39 314.7 18.7 268 581-857 1-282 (286)
265 cd06613 STKc_MAP4K3_like Catal 100.0 6.1E-34 1.3E-38 304.1 24.4 253 581-857 3-259 (262)
266 cd05110 PTKc_HER4 Catalytic do 100.0 7E-34 1.5E-38 310.3 25.3 258 581-865 7-271 (303)
267 cd08220 STKc_Nek8 Catalytic do 100.0 7.2E-34 1.6E-38 302.4 24.7 250 582-857 1-252 (256)
268 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-33 2.2E-38 302.8 25.3 253 582-857 1-260 (264)
269 cd05580 STKc_PKA Catalytic dom 100.0 3.8E-34 8.2E-39 310.5 22.2 246 581-857 1-253 (290)
270 cd05083 PTKc_Chk Catalytic dom 100.0 5.7E-34 1.2E-38 302.8 22.9 247 581-861 6-253 (254)
271 cd06611 STKc_SLK_like Catalyti 100.0 3.1E-34 6.7E-39 309.7 21.0 252 580-857 4-261 (280)
272 KOG0586 Serine/threonine prote 100.0 8.7E-35 1.9E-39 315.0 16.5 250 580-858 55-306 (596)
273 KOG0690 Serine/threonine prote 100.0 5.2E-35 1.1E-39 290.1 13.3 243 580-850 167-411 (516)
274 cd06639 STKc_myosinIIIB Cataly 100.0 5.3E-34 1.2E-38 309.6 22.7 262 572-857 13-286 (291)
275 cd06658 STKc_PAK5 Catalytic do 100.0 2.1E-34 4.4E-39 312.5 19.4 248 582-857 23-271 (292)
276 cd06630 STKc_MEKK1 Catalytic d 100.0 4.1E-34 8.8E-39 306.6 21.3 254 582-857 1-263 (268)
277 cd07860 STKc_CDK2_3 Catalytic 100.0 5E-34 1.1E-38 308.7 22.2 264 582-857 1-280 (284)
278 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.4E-34 3E-39 308.3 17.5 240 587-860 1-258 (258)
279 cd05044 PTKc_c-ros Catalytic d 100.0 5.1E-34 1.1E-38 306.0 21.9 252 587-860 1-268 (269)
280 KOG0983 Mitogen-activated prot 100.0 9.5E-35 2.1E-39 282.3 14.4 248 585-857 96-348 (391)
281 cd07867 STKc_CDC2L6 Catalytic 100.0 4.7E-34 1E-38 314.2 22.1 198 586-791 6-219 (317)
282 KOG1025 Epidermal growth facto 100.0 2E-34 4.3E-39 317.3 18.8 252 585-863 700-958 (1177)
283 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.4E-34 9.6E-39 304.7 21.2 237 587-859 1-258 (259)
284 cd06629 STKc_MAPKKK_Bck1_like 100.0 4E-34 8.6E-39 307.4 20.8 255 582-857 2-268 (272)
285 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7E-34 1.5E-38 307.2 22.7 258 573-857 8-278 (282)
286 smart00219 TyrKc Tyrosine kina 100.0 1.4E-33 3.1E-38 300.5 24.5 252 583-859 1-258 (258)
287 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-33 2.7E-38 304.5 24.2 248 582-857 2-254 (277)
288 cd07841 STKc_CDK7 Catalytic do 100.0 8.1E-34 1.8E-38 309.4 22.9 265 582-857 1-281 (298)
289 cd05609 STKc_MAST Catalytic do 100.0 1.1E-33 2.4E-38 309.2 23.8 256 581-860 1-272 (305)
290 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.8E-33 3.9E-38 304.7 25.3 260 581-857 1-265 (287)
291 cd05574 STKc_phototropin_like 100.0 1.5E-33 3.3E-38 309.9 24.9 254 581-857 1-288 (316)
292 cd06647 STKc_PAK_I Catalytic d 100.0 8.2E-34 1.8E-38 308.1 22.4 249 581-857 19-268 (293)
293 cd06659 STKc_PAK6 Catalytic do 100.0 4.3E-34 9.3E-39 310.8 20.1 246 584-857 24-270 (297)
294 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-33 4E-38 300.9 24.6 251 581-857 2-260 (265)
295 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-33 3.1E-38 305.0 23.9 253 581-857 1-260 (283)
296 KOG0666 Cyclin C-dependent kin 100.0 1.6E-34 3.4E-39 285.7 14.7 273 581-857 24-336 (438)
297 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.2E-34 2E-38 307.8 22.3 266 580-857 4-287 (291)
298 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-33 5.1E-38 302.1 25.3 248 581-857 4-252 (277)
299 cd06605 PKc_MAPKK Catalytic do 100.0 5.4E-34 1.2E-38 305.1 20.2 255 581-857 1-256 (265)
300 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-35 2.3E-40 343.5 6.6 258 575-857 1229-1493(1509)
301 cd05578 STKc_Yank1 Catalytic d 100.0 3.6E-34 7.9E-39 305.1 17.9 249 582-856 1-253 (258)
302 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-33 2.6E-38 304.1 22.1 255 579-857 4-271 (275)
303 KOG1006 Mitogen-activated prot 100.0 6.9E-36 1.5E-40 289.3 3.9 256 584-857 67-326 (361)
304 cd07844 STKc_PCTAIRE_like Cata 100.0 9.1E-34 2E-38 307.8 21.0 265 581-857 5-287 (291)
305 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-33 2.7E-38 300.9 21.5 251 582-857 1-253 (257)
306 KOG1035 eIF-2alpha kinase GCN2 100.0 1.7E-34 3.7E-39 332.1 15.8 255 578-857 476-870 (1351)
307 KOG0986 G protein-coupled rece 100.0 7.5E-35 1.6E-39 301.7 11.2 251 578-851 182-434 (591)
308 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-33 3.8E-38 305.1 22.4 257 582-857 5-266 (288)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-33 3.2E-38 306.5 21.8 265 581-857 5-289 (293)
310 cd07852 STKc_MAPK15 Catalytic 100.0 3.3E-33 7.2E-38 309.9 25.0 270 578-857 4-294 (337)
311 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-33 5.2E-38 303.3 22.8 265 583-857 1-279 (283)
312 cd06648 STKc_PAK_II Catalytic 100.0 6E-33 1.3E-37 300.1 25.7 248 582-857 20-268 (285)
313 cd07837 STKc_CdkB_plant Cataly 100.0 2.5E-33 5.4E-38 305.1 22.9 270 581-857 1-290 (295)
314 KOG0604 MAP kinase-activated p 100.0 2.1E-34 4.7E-39 283.6 12.9 253 578-857 58-321 (400)
315 cd06623 PKc_MAPKK_plant_like C 100.0 7.1E-33 1.5E-37 296.2 25.8 254 581-857 1-255 (264)
316 cd07842 STKc_CDK8_like Catalyt 100.0 2.1E-33 4.5E-38 309.0 22.0 272 582-857 1-312 (316)
317 cd08530 STKc_CNK2-like Catalyt 100.0 2.2E-33 4.8E-38 298.6 21.2 251 582-857 1-252 (256)
318 cd07850 STKc_JNK Catalytic dom 100.0 3E-33 6.5E-38 312.2 23.1 267 578-857 13-310 (353)
319 cd05633 STKc_GRK3 Catalytic do 100.0 3E-33 6.4E-38 301.4 22.0 243 588-857 1-254 (279)
320 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-33 7.8E-38 305.8 22.9 271 580-868 6-294 (309)
321 PLN00009 cyclin-dependent kina 100.0 3.5E-33 7.7E-38 303.7 22.5 267 581-857 2-283 (294)
322 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-33 5.2E-38 307.6 21.3 268 581-857 12-306 (310)
323 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-33 6.9E-38 309.5 22.1 266 580-857 4-293 (334)
324 cd06614 STKc_PAK Catalytic dom 100.0 9.2E-33 2E-37 299.1 25.1 252 579-857 17-269 (286)
325 cd06627 STKc_Cdc7_like Catalyt 100.0 6E-33 1.3E-37 294.9 23.2 249 582-857 1-250 (254)
326 cd06607 STKc_TAO Catalytic dom 100.0 9.4E-33 2E-37 302.1 25.3 247 581-857 15-266 (307)
327 cd05122 PKc_STE Catalytic doma 100.0 1.2E-32 2.6E-37 292.1 25.4 249 582-857 1-250 (253)
328 KOG1024 Receptor-like protein 100.0 3.9E-33 8.4E-38 283.6 20.1 269 573-863 276-556 (563)
329 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-32 3.1E-37 292.7 25.2 253 582-857 1-254 (258)
330 cd07849 STKc_ERK1_2_like Catal 100.0 1.8E-33 4E-38 311.7 18.9 265 579-857 3-291 (336)
331 cd06606 STKc_MAPKKK Catalytic 100.0 8.1E-33 1.8E-37 294.7 23.0 252 582-857 1-256 (260)
332 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-32 3.6E-37 293.3 25.4 251 581-857 2-260 (264)
333 cd05583 STKc_MSK_N N-terminal 100.0 3.4E-33 7.5E-38 302.8 20.3 256 582-860 1-265 (288)
334 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.6E-33 1.6E-37 307.3 23.5 262 576-857 10-297 (343)
335 cd07840 STKc_CDK9_like Catalyt 100.0 5.1E-33 1.1E-37 301.4 21.5 264 583-857 1-283 (287)
336 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.3E-33 1.1E-37 308.1 22.1 263 580-857 4-290 (337)
337 cd05572 STKc_cGK_PKG Catalytic 100.0 9E-33 2E-37 295.1 22.9 244 589-857 1-251 (262)
338 KOG0584 Serine/threonine prote 100.0 7.5E-34 1.6E-38 307.9 14.3 246 585-857 44-295 (632)
339 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-32 4.9E-37 300.4 26.3 249 582-860 26-279 (317)
340 cd05577 STKc_GRK Catalytic dom 100.0 5.7E-33 1.2E-37 299.2 21.1 246 589-857 1-253 (277)
341 cd07864 STKc_CDK12 Catalytic d 100.0 6.4E-33 1.4E-37 303.0 21.6 269 578-857 4-298 (302)
342 cd05613 STKc_MSK1_N N-terminal 100.0 7.1E-33 1.5E-37 300.6 21.7 253 582-857 1-267 (290)
343 PHA03390 pk1 serine/threonine- 100.0 1.2E-32 2.6E-37 294.6 23.1 249 574-857 7-261 (267)
344 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-32 2.5E-37 298.1 23.2 266 582-857 1-280 (284)
345 cd06657 STKc_PAK4 Catalytic do 100.0 7.7E-33 1.7E-37 300.0 21.7 244 586-857 25-269 (292)
346 PHA02882 putative serine/threo 100.0 1.4E-32 3.1E-37 298.4 23.5 257 580-859 11-293 (294)
347 KOG4250 TANK binding protein k 100.0 1.9E-33 4.1E-38 308.4 16.6 273 583-863 15-311 (732)
348 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-32 2.4E-37 298.0 22.4 260 583-857 1-278 (282)
349 KOG0612 Rho-associated, coiled 100.0 1.5E-33 3.2E-38 321.8 15.8 283 573-881 67-371 (1317)
350 cd05611 STKc_Rim15_like Cataly 100.0 1.9E-32 4.2E-37 292.2 23.4 245 587-859 2-249 (260)
351 cd05606 STKc_beta_ARK Catalyti 100.0 1.9E-32 4.1E-37 295.1 23.4 243 588-857 1-254 (278)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-32 3.4E-37 302.6 23.2 266 578-857 7-287 (328)
353 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-32 4E-37 302.6 23.7 258 587-857 4-307 (328)
354 KOG0607 MAP kinase-interacting 100.0 6.5E-33 1.4E-37 275.0 17.3 260 573-857 75-360 (463)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 1.4E-32 3E-37 305.2 22.1 263 579-857 13-296 (342)
356 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.1E-32 6.8E-37 302.6 24.8 269 573-857 9-299 (345)
357 cd07834 STKc_MAPK Catalytic do 100.0 1.2E-32 2.6E-37 304.8 21.1 264 582-857 1-288 (330)
358 cd05581 STKc_PDK1 Catalytic do 100.0 8.8E-33 1.9E-37 298.3 19.2 250 581-857 1-276 (280)
359 KOG0200 Fibroblast/platelet-de 100.0 1.7E-32 3.8E-37 322.1 22.8 263 581-864 296-581 (609)
360 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-32 4.8E-37 292.5 21.6 246 589-859 1-255 (265)
361 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-32 5.3E-37 295.4 22.0 263 583-857 1-279 (283)
362 cd07838 STKc_CDK4_6_like Catal 100.0 3.7E-32 7.9E-37 294.7 23.0 264 583-857 1-283 (287)
363 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-32 2.4E-37 302.4 19.2 268 580-857 7-307 (311)
364 cd06634 STKc_TAO2 Catalytic do 100.0 5.1E-32 1.1E-36 296.3 24.1 247 581-857 15-266 (308)
365 cd08216 PK_STRAD Pseudokinase 100.0 2.9E-32 6.3E-37 299.5 22.0 264 585-857 6-294 (314)
366 cd07857 STKc_MPK1 Catalytic do 100.0 8.4E-32 1.8E-36 297.9 24.8 267 582-857 1-291 (332)
367 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-31 3.4E-36 293.0 25.9 245 583-857 23-272 (313)
368 cd07851 STKc_p38 Catalytic dom 100.0 3.4E-32 7.4E-37 302.2 20.8 259 579-857 13-297 (343)
369 cd06618 PKc_MKK7 Catalytic dom 100.0 9E-32 1.9E-36 292.8 23.5 252 581-857 15-272 (296)
370 PTZ00024 cyclin-dependent prot 100.0 8.1E-32 1.8E-36 298.6 23.0 266 580-857 7-312 (335)
371 KOG0587 Traf2- and Nck-interac 100.0 3.5E-32 7.7E-37 303.8 18.7 261 571-857 9-281 (953)
372 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-31 2.4E-36 290.3 21.9 264 583-857 1-279 (283)
373 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.8E-32 1.9E-36 298.8 20.3 264 580-857 4-299 (342)
374 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-31 2.5E-36 289.9 20.7 262 583-857 1-278 (282)
375 cd05123 STKc_AGC Catalytic dom 100.0 1.4E-31 3E-36 283.8 20.8 238 589-854 1-240 (250)
376 KOG0662 Cyclin-dependent kinas 100.0 3.7E-32 8E-37 248.0 13.8 265 582-857 3-282 (292)
377 cd08222 STKc_Nek11 Catalytic d 100.0 1.3E-31 2.7E-36 285.9 20.2 252 582-857 1-256 (260)
378 cd05610 STKc_MASTL Catalytic d 100.0 3.3E-31 7.1E-36 316.5 24.4 147 581-735 4-152 (669)
379 KOG1151 Tousled-like protein k 100.0 2E-32 4.4E-37 281.7 11.9 260 579-857 461-740 (775)
380 KOG4236 Serine/threonine prote 100.0 1.3E-32 2.9E-37 288.6 10.0 245 586-857 569-818 (888)
381 KOG4194 Membrane glycoprotein 100.0 6.1E-33 1.3E-37 295.2 7.0 365 50-435 47-436 (873)
382 KOG0984 Mitogen-activated prot 100.0 4.1E-32 8.9E-37 253.8 11.4 209 576-791 41-255 (282)
383 KOG0614 cGMP-dependent protein 100.0 2.1E-32 4.5E-37 286.7 10.1 244 581-851 420-665 (732)
384 KOG0603 Ribosomal protein S6 k 100.0 7.8E-32 1.7E-36 293.8 14.5 244 579-867 320-566 (612)
385 KOG0669 Cyclin T-dependent kin 100.0 1.1E-32 2.4E-37 264.7 5.6 268 581-857 17-314 (376)
386 KOG0696 Serine/threonine prote 100.0 9E-32 2E-36 274.9 11.8 243 581-851 349-594 (683)
387 KOG0671 LAMMER dual specificit 100.0 1.8E-31 3.9E-36 272.7 12.6 263 578-857 86-405 (415)
388 cd05576 STKc_RPK118_like Catal 100.0 7.6E-31 1.6E-35 275.4 17.6 221 592-854 4-225 (237)
389 PLN03224 probable serine/threo 100.0 5.4E-30 1.2E-34 289.7 22.2 268 580-868 144-504 (507)
390 KOG1027 Serine/threonine prote 100.0 1.2E-30 2.7E-35 290.2 16.2 244 585-857 513-766 (903)
391 PLN03225 Serine/threonine-prot 100.0 5.2E-30 1.1E-34 298.1 19.4 268 580-869 131-455 (566)
392 KOG0695 Serine/threonine prote 100.0 3.2E-30 6.9E-35 256.9 13.7 248 581-850 250-502 (593)
393 KOG0444 Cytoskeletal regulator 100.0 1.4E-32 3.1E-37 293.5 -4.1 315 66-430 32-354 (1255)
394 smart00220 S_TKc Serine/Threon 100.0 4.9E-29 1.1E-33 262.6 20.1 239 593-857 1-240 (244)
395 KOG0664 Nemo-like MAPK-related 100.0 8.1E-31 1.7E-35 254.4 4.3 267 584-859 56-344 (449)
396 KOG4194 Membrane glycoprotein 100.0 4.1E-31 9E-36 281.4 1.7 342 65-427 101-451 (873)
397 KOG0608 Warts/lats-like serine 100.0 3.4E-29 7.4E-34 268.5 14.6 208 581-796 629-879 (1034)
398 KOG0444 Cytoskeletal regulator 100.0 1.2E-31 2.5E-36 286.6 -5.5 319 66-432 55-379 (1255)
399 KOG0472 Leucine-rich repeat pr 100.0 6.3E-32 1.4E-36 275.9 -9.9 371 67-449 69-541 (565)
400 KOG1290 Serine/threonine prote 100.0 2.3E-28 5E-33 256.3 15.9 132 581-721 78-222 (590)
401 KOG0668 Casein kinase II, alph 100.0 1E-28 2.2E-33 234.3 11.6 258 580-857 37-321 (338)
402 KOG0576 Mitogen-activated prot 100.0 2.6E-29 5.7E-34 272.2 5.5 252 580-856 14-269 (829)
403 KOG1152 Signal transduction se 100.0 1.5E-28 3.3E-33 261.9 10.4 199 580-789 560-770 (772)
404 KOG0665 Jun-N-terminal kinase 99.9 7.5E-28 1.6E-32 240.5 11.0 263 581-857 17-309 (369)
405 cd00180 PKc Catalytic domain o 99.9 2.6E-26 5.7E-31 235.9 22.0 211 589-858 1-214 (215)
406 KOG0670 U4/U6-associated splic 99.9 1.4E-27 2.9E-32 251.4 10.9 276 570-857 421-745 (752)
407 KOG1345 Serine/threonine kinas 99.9 8.4E-27 1.8E-31 227.0 12.5 254 579-859 22-285 (378)
408 KOG0472 Leucine-rich repeat pr 99.9 1.1E-29 2.3E-34 259.7 -8.6 349 67-428 92-541 (565)
409 smart00221 STYKc Protein kinas 99.9 8.5E-26 1.8E-30 235.0 19.4 200 583-790 1-202 (225)
410 KOG1167 Serine/threonine prote 99.9 2.1E-26 4.5E-31 239.4 13.5 269 574-857 29-380 (418)
411 PRK15387 E3 ubiquitin-protein 99.9 9.1E-25 2E-29 255.2 17.4 261 68-433 203-463 (788)
412 KOG0195 Integrin-linked kinase 99.9 5.8E-25 1.3E-29 213.8 7.9 247 585-862 194-446 (448)
413 KOG4237 Extracellular matrix p 99.9 7.4E-26 1.6E-30 231.7 0.9 366 51-425 39-498 (498)
414 KOG1165 Casein kinase (serine/ 99.9 3.2E-23 7E-28 207.8 18.7 264 580-866 27-303 (449)
415 PLN00181 protein SPA1-RELATED; 99.9 1.8E-24 3.8E-29 265.6 11.6 194 636-857 29-264 (793)
416 smart00750 KIND kinase non-cat 99.9 5E-23 1.1E-27 205.4 15.6 170 664-863 1-170 (176)
417 KOG1164 Casein kinase (serine/ 99.9 2.6E-22 5.5E-27 219.7 21.9 261 582-866 19-301 (322)
418 PRK09188 serine/threonine prot 99.9 4.6E-23 9.9E-28 223.7 14.9 170 576-763 13-195 (365)
419 KOG1163 Casein kinase (serine/ 99.9 1.1E-22 2.4E-27 195.2 12.8 262 579-863 13-285 (341)
420 PRK15387 E3 ubiquitin-protein 99.9 1.7E-22 3.8E-27 236.2 15.0 247 66-414 222-468 (788)
421 PRK15370 E3 ubiquitin-protein 99.9 1.1E-21 2.3E-26 231.4 19.8 247 91-429 179-429 (754)
422 KOG0618 Serine/threonine phosp 99.9 2.2E-24 4.7E-29 242.8 -2.8 373 67-450 46-490 (1081)
423 PRK15370 E3 ubiquitin-protein 99.9 9.6E-22 2.1E-26 231.8 12.8 202 67-316 179-380 (754)
424 COG0515 SPS1 Serine/threonine 99.9 5.1E-20 1.1E-24 204.1 24.9 261 583-858 2-275 (384)
425 KOG0590 Checkpoint kinase and 99.9 3.1E-22 6.8E-27 231.8 6.5 261 584-869 321-590 (601)
426 PLN03210 Resistant to P. syrin 99.8 9.4E-20 2E-24 230.6 24.1 330 66-426 558-904 (1153)
427 cd05147 RIO1_euk RIO kinase fa 99.8 1.4E-20 3.1E-25 188.1 12.8 142 586-738 2-168 (190)
428 PRK10359 lipopolysaccharide co 99.8 8E-21 1.7E-25 191.1 10.4 175 577-782 27-216 (232)
429 PLN03210 Resistant to P. syrin 99.8 1.3E-19 2.9E-24 229.2 21.7 305 66-402 589-904 (1153)
430 PRK12274 serine/threonine prot 99.8 1.2E-19 2.6E-24 178.1 14.6 189 584-792 5-211 (218)
431 KOG0618 Serine/threonine phosp 99.8 2E-21 4.4E-26 219.1 -1.2 305 68-433 23-328 (1081)
432 KOG4237 Extracellular matrix p 99.8 3.5E-21 7.5E-26 197.7 0.6 301 59-429 40-360 (498)
433 cd05145 RIO1_like RIO kinase f 99.8 4.8E-19 1E-23 178.1 15.3 143 586-739 2-169 (190)
434 KOG0603 Ribosomal protein S6 k 99.8 1.3E-20 2.9E-25 206.4 2.6 227 588-852 1-232 (612)
435 PF14531 Kinase-like: Kinase-l 99.8 1.2E-19 2.6E-24 188.2 9.6 237 582-849 13-288 (288)
436 KOG1240 Protein kinase contain 99.8 4.5E-20 9.8E-25 211.3 4.5 250 582-861 24-294 (1431)
437 KOG4158 BRPK/PTEN-induced prot 99.8 2.6E-19 5.7E-24 183.7 8.5 197 637-860 274-512 (598)
438 KOG0617 Ras suppressor protein 99.8 4.8E-21 1E-25 174.4 -5.1 178 184-449 30-212 (264)
439 KOG0617 Ras suppressor protein 99.8 1.9E-20 4.2E-25 170.5 -3.9 164 107-300 27-191 (264)
440 KOG1023 Natriuretic peptide re 99.8 4.1E-18 9E-23 187.8 13.1 215 633-863 1-225 (484)
441 PRK10345 hypothetical protein; 99.8 1E-17 2.2E-22 168.7 14.8 135 583-732 4-154 (210)
442 cd00116 LRR_RI Leucine-rich re 99.7 2.2E-19 4.7E-24 197.7 -3.9 280 70-427 2-319 (319)
443 smart00090 RIO RIO-like kinase 99.7 4.8E-17 1.1E-21 168.3 13.5 145 581-738 28-199 (237)
444 KOG1166 Mitotic checkpoint ser 99.7 3.3E-17 7.2E-22 192.9 13.7 196 576-786 693-901 (974)
445 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-16 2.6E-21 162.1 13.2 146 576-739 10-177 (198)
446 PRK14879 serine/threonine prot 99.7 1.8E-16 4E-21 163.0 14.8 136 587-736 2-143 (211)
447 cd00116 LRR_RI Leucine-rich re 99.7 1.1E-18 2.4E-23 192.2 -4.1 260 94-430 2-293 (319)
448 TIGR03724 arch_bud32 Kae1-asso 99.7 2.2E-16 4.7E-21 160.8 13.0 133 588-737 1-139 (199)
449 KOG0606 Microtubule-associated 99.7 6E-17 1.3E-21 186.2 9.3 213 581-856 83-310 (1205)
450 PRK09605 bifunctional UGMP fam 99.7 4.2E-16 9.1E-21 182.4 14.4 142 578-737 330-477 (535)
451 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.7E-17 8E-22 176.2 3.3 174 653-854 330-508 (516)
452 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.3E-19 146.7 12.5 139 586-738 2-165 (187)
453 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-14 4.1E-19 139.4 13.3 135 585-736 2-138 (155)
454 PRK01723 3-deoxy-D-manno-octul 99.6 2.3E-14 4.9E-19 148.8 14.5 138 586-737 36-192 (239)
455 KOG0590 Checkpoint kinase and 99.5 9.2E-16 2E-20 178.2 0.3 257 581-857 20-285 (601)
456 PLN03150 hypothetical protein; 99.5 3.8E-14 8.2E-19 167.6 12.5 158 22-205 367-533 (623)
457 TIGR01982 UbiB 2-polyprenylphe 99.4 1.1E-12 2.4E-17 148.2 12.8 148 581-739 118-309 (437)
458 PLN03150 hypothetical protein; 99.4 6.5E-13 1.4E-17 157.1 11.0 76 359-434 434-509 (623)
459 KOG0532 Leucine-rich repeat (L 99.4 3E-14 6.4E-19 153.6 -2.4 213 118-426 55-271 (722)
460 KOG1266 Protein kinase [Signal 99.3 1.6E-12 3.4E-17 131.5 7.7 204 631-857 119-330 (458)
461 KOG0601 Cyclin-dependent kinas 99.3 1.9E-12 4.1E-17 143.1 8.9 250 581-857 114-378 (524)
462 KOG0532 Leucine-rich repeat (L 99.3 3.8E-14 8.2E-19 152.8 -4.6 196 71-299 55-251 (722)
463 COG4886 Leucine-rich repeat (L 99.3 1.6E-12 3.4E-17 147.4 7.8 63 368-433 233-295 (394)
464 COG4886 Leucine-rich repeat (L 99.3 1.8E-12 3.9E-17 147.0 7.0 196 94-299 97-294 (394)
465 PRK04750 ubiB putative ubiquin 99.3 3.7E-12 8.1E-17 145.0 8.1 151 577-739 116-316 (537)
466 cd05146 RIO3_euk RIO kinase fa 99.2 1.3E-10 2.8E-15 114.8 14.4 139 586-738 2-175 (197)
467 cd05151 ChoK Choline Kinase (C 99.2 3.4E-11 7.4E-16 119.1 10.0 130 586-735 3-135 (170)
468 KOG1243 Protein kinase [Genera 99.2 3.9E-10 8.6E-15 125.8 18.3 167 601-784 33-199 (690)
469 COG3642 Mn2+-dependent serine/ 99.2 3E-10 6.4E-15 107.6 13.2 134 587-737 2-141 (204)
470 KOG1259 Nischarin, modulator o 99.2 6.3E-12 1.4E-16 125.2 1.6 134 233-432 282-416 (490)
471 KOG0606 Microtubule-associated 99.1 2.5E-11 5.5E-16 140.6 4.4 251 580-854 803-1085(1205)
472 PF14580 LRR_9: Leucine-rich r 99.1 3.3E-11 7.2E-16 116.6 3.9 86 109-200 15-101 (175)
473 KOG1259 Nischarin, modulator o 99.1 1.4E-11 3E-16 122.9 1.1 185 83-298 207-415 (490)
474 PF14580 LRR_9: Leucine-rich r 99.1 3.8E-11 8.2E-16 116.2 3.6 109 86-200 15-126 (175)
475 cd05154 ACAD10_11_like Acyl-Co 99.1 6E-10 1.3E-14 115.5 12.9 143 586-735 3-205 (223)
476 KOG3087 Serine/threonine prote 99.1 8.8E-10 1.9E-14 103.5 12.3 145 585-736 11-165 (229)
477 KOG3207 Beta-tubulin folding c 99.1 1.2E-11 2.6E-16 130.0 -2.1 65 111-175 119-184 (505)
478 KOG0601 Cyclin-dependent kinas 99.1 1.5E-10 3.3E-15 128.2 6.2 248 577-858 261-514 (524)
479 KOG3207 Beta-tubulin folding c 99.0 3E-11 6.4E-16 127.1 -0.2 209 87-296 118-340 (505)
480 KOG0531 Protein phosphatase 1, 99.0 5.7E-11 1.2E-15 134.8 1.4 175 87-295 69-245 (414)
481 KOG1909 Ran GTPase-activating 99.0 1.6E-11 3.5E-16 125.8 -3.2 39 390-428 269-311 (382)
482 KOG1909 Ran GTPase-activating 99.0 3E-11 6.5E-16 123.9 -2.2 125 160-295 89-226 (382)
483 COG4248 Uncharacterized protei 99.0 3.7E-08 8.1E-13 103.7 19.2 273 585-875 15-313 (637)
484 KOG0531 Protein phosphatase 1, 98.9 1.3E-10 2.8E-15 131.9 -1.1 214 67-316 73-290 (414)
485 PF01163 RIO1: RIO1 family; I 98.9 2.2E-08 4.7E-13 98.8 12.8 128 596-738 1-157 (188)
486 PRK15123 lipopolysaccharide co 98.9 3.4E-08 7.3E-13 103.7 14.4 142 587-735 28-193 (268)
487 KOG3741 Poly(A) ribonuclease s 98.8 1.2E-07 2.7E-12 102.6 16.0 169 595-786 290-474 (655)
488 PF13855 LRR_8: Leucine rich r 98.8 3.9E-09 8.5E-14 84.0 3.3 60 90-149 1-61 (61)
489 PF13855 LRR_8: Leucine rich r 98.8 5.1E-09 1.1E-13 83.3 3.9 61 367-427 1-61 (61)
490 KOG4658 Apoptotic ATPase [Sign 98.8 4.8E-09 1E-13 126.8 4.7 298 88-423 521-827 (889)
491 COG0478 RIO-like serine/threon 98.7 8.5E-08 1.8E-12 96.6 11.5 137 583-736 93-251 (304)
492 PRK09902 hypothetical protein; 98.6 8.7E-07 1.9E-11 87.7 14.8 140 589-735 26-178 (216)
493 KOG4658 Apoptotic ATPase [Sign 98.6 6E-08 1.3E-12 117.5 6.0 104 91-197 546-652 (889)
494 KOG2982 Uncharacterized conser 98.5 2.1E-08 4.6E-13 100.6 0.3 183 67-249 72-263 (418)
495 PF06293 Kdo: Lipopolysacchari 98.5 1.1E-06 2.4E-11 89.3 12.7 107 623-737 55-171 (206)
496 KOG1859 Leucine-rich repeat pr 98.5 3.7E-09 8E-14 117.7 -7.2 131 234-430 163-294 (1096)
497 COG0661 AarF Predicted unusual 98.5 6.3E-07 1.4E-11 101.8 10.4 149 580-739 125-317 (517)
498 KOG2137 Protein kinase [Signal 98.4 9.5E-08 2.1E-12 107.6 3.0 150 691-857 106-264 (700)
499 COG1718 RIO1 Serine/threonine 98.4 6.6E-06 1.4E-10 82.5 13.5 155 571-738 35-217 (268)
500 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 7.2E-06 1.6E-10 84.5 13.5 141 587-735 7-181 (226)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.1e-84 Score=812.98 Aligned_cols=790 Identities=26% Similarity=0.436 Sum_probs=476.3
Q ss_pred HHHHHHHHHHHhccCCccchHHHHHHHHHhcCCC---CCCCCCCCCCCCccccceEeCCCCCEEEEEecCCCCccccCcc
Q 002346 9 SICAVVLLLLQLTTTSLGDDGSVMLKLAQSLQNL---PSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPE 85 (933)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~---~~~w~~~~~~~~C~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~ 85 (933)
+++++++++....+-+.++|+.||++||+++.+. ..+|. ...+||.|.||+|++.++|+.|+|++++++|.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~--~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~ 88 (968)
T PLN00113 11 YLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNWN--SSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSA 88 (968)
T ss_pred hHHHHHHHHHHHccCCCHHHHHHHHHHHHhCCCCcccCCCCC--CCCCCCcCcceecCCCCcEEEEEecCCCccccCChH
Confidence 3333333334445555778999999999999643 24564 466899999999998889999999999999999999
Q ss_pred ccCCcccceeecccccccccCC-C-ccCcCcCceeccccccccC----------------------CCCCcccCCCCCCE
Q 002346 86 ISSLTQLETLSFQMNNIAGAIP-S-LANATSLQDIYLDNNNFTS----------------------VPTGCFDGLTNLQV 141 (933)
Q Consensus 86 ~~~l~~L~~L~l~~N~l~~~~p-~-~~~l~~L~~L~Ls~N~l~~----------------------~~~~~~~~l~~L~~ 141 (933)
+..+++|+.|+|++|++++.+| . +..+++|++|+|++|++++ ..+..++++++|++
T Consensus 89 ~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 168 (968)
T PLN00113 89 IFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKV 168 (968)
T ss_pred HhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCE
Confidence 9999999999999999987776 3 3467777777777776653 22333445555555
Q ss_pred EEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccc
Q 002346 142 LSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQ 220 (933)
Q Consensus 142 L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n 220 (933)
|+|++|.+.+ .+|..+.++++|++|+|++|++.+.+|..++.+++|++|+|++|++++.+|..+.. .+|++|++.+|
T Consensus 169 L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 246 (968)
T PLN00113 169 LDLGGNVLVG--KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYN 246 (968)
T ss_pred EECccCcccc--cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCc
Confidence 5555555544 34555555555555555555555555555555555555555555555555554443 34555555555
Q ss_pred cCCcccccccccCCccCcEEEecCCccCC------------------------CCCC-CCCCCCCCEEEccCCcccccCc
Q 002346 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTG------------------------PIPD-LSKCESLFDLSLRDNQLTGVVP 275 (933)
Q Consensus 221 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~------------------------~~~~-~~~~~~L~~L~L~~N~l~~~~p 275 (933)
.+... .+..+.++++|+.|+|++|++++ .+|. +..+++|+.|++++|.+++.+|
T Consensus 247 ~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 325 (968)
T PLN00113 247 NLTGP-IPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325 (968)
T ss_pred eeccc-cChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCC
Confidence 43211 11123334444444444444443 3332 3344444444444444444444
Q ss_pred ccccCCCCCCEEEccCccCccCCCCC---CCCccEEeccCCcCCCCCCCCCCCCC----------------ch----hhh
Q 002346 276 ASVISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCD----------------PQ----VTT 332 (933)
Q Consensus 276 ~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~l~~n~~~~~~~~~~~~~~----------------~~----~~~ 332 (933)
..+..+++|+.|+|++|.+++.+|.. ..+|+.|+|++|++.+..+....... +. ...
T Consensus 326 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~ 405 (968)
T PLN00113 326 VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS 405 (968)
T ss_pred hhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCC
Confidence 44555555555555555555444432 12445555555555433222111000 00 000
Q ss_pred hH-----------hhhc------------------------------------------------ccCCCccccCCCCCC
Q 002346 333 LL-----------QIAG------------------------------------------------DMGYPAILSDSWEGN 353 (933)
Q Consensus 333 ~~-----------~~~~------------------------------------------------~~~~~~~l~~~~~~~ 353 (933)
+. .++. .......-..++.+|
T Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n 485 (968)
T PLN00113 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRN 485 (968)
T ss_pred CCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCC
Confidence 00 0000 000000111233445
Q ss_pred CCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCC
Q 002346 354 NACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (933)
Q Consensus 354 ~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 433 (933)
...+.+|..+.++++|+.|+|++|++.+.+|..++++++|++|+|++|+++|.+|..|..+++|+.|+|++|+++|.+|.
T Consensus 486 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 565 (968)
T PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK 565 (968)
T ss_pred ccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCCh
Confidence 55556666666677777777777777777777777777777777777777777777777777777777777777777764
Q ss_pred CCC---CcccccCCCCCCcCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCccceeehhhhHHHHHH
Q 002346 434 FGS---NVKFTVSPGNPFIGTNV-------------DTTPGGAGTPGSKPSGPSGSPAASSKSKLSVGTIVAIVVVVVIF 497 (933)
Q Consensus 434 ~~~---~~~~~~~~~n~~~~~~~-------------~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~ 497 (933)
... .++...+.+|++.+.-. ...+..||.+.....++. ....+ ...+..+++++++++++
T Consensus 566 ~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c---~~~~~-~~~~~~~~~~~~~~~~~ 641 (968)
T PLN00113 566 NLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPC---KRVRK-TPSWWFYITCTLGAFLV 641 (968)
T ss_pred hHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCC---ccccc-cceeeeehhHHHHHHHH
Confidence 321 12222334555443111 011111111100000000 01111 11222233333332222
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCCCccccCC-ceeecHHHH
Q 002346 498 IAVVFFVVYKFIARRKHRKFGRVKNPEVGNEMNKNGVTGGNGTNGYNGVPSELHSQSSGDVSDRHLFEGG-NVAISIEVL 576 (933)
Q Consensus 498 i~~~~~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 576 (933)
++++++++ .++++|++.+..+..... +. .. ...+... ...+..
T Consensus 642 ~~~~~~~~-~~~~~~~~~~~~~~~~~~--------------~~---~~---------------~~~~~~~~~~~~~~--- 685 (968)
T PLN00113 642 LALVAFGF-VFIRGRNNLELKRVENED--------------GT---WE---------------LQFFDSKVSKSITI--- 685 (968)
T ss_pred HHHHHHHH-HHHHhhhccccccccccc--------------cc---cc---------------ccccccccchhhhH---
Confidence 22222222 222222211111100000 00 00 0000000 011222
Q ss_pred HHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
......|...+.||+|+||.||+|.. .++..||||++..... ....|++.+++++|||||+++++|.++...+
T Consensus 686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~ 759 (968)
T PLN00113 686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAY 759 (968)
T ss_pred HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCE
Confidence 23345678889999999999999965 5789999999865421 1235688999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+++|+|.++++. ++|.++.+|+.|+++|++|||..+.++|+||||||+||+++.++.+++. ||...
T Consensus 760 lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~ 830 (968)
T PLN00113 760 LIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG 830 (968)
T ss_pred EEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence 99999999999999942 7899999999999999999996555899999999999999999988875 66554
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
..... ....|++.|+|||++.+..++.++|||||||++|||+||+.||+.... .....+.|.+.... ......
T Consensus 831 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 903 (968)
T PLN00113 831 LLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYS-DCHLDM 903 (968)
T ss_pred ccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcC-ccchhh
Confidence 33221 223688999999999999999999999999999999999999965432 23345556554322 223344
Q ss_pred ccCCCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 816 AIDPNLNLD-EETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 816 ~~d~~l~~~-~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
.+|+.+... ....+++.++.+++.+|++.+|++||+|+|+++.|+++...
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred eeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 455554322 23345667888999999999999999999999999887543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-52 Score=457.19 Aligned_cols=290 Identities=47% Similarity=0.824 Sum_probs=253.4
Q ss_pred CceeecHHHHHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEe
Q 002346 567 GNVAISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG 646 (933)
Q Consensus 567 ~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 646 (933)
....|++++++.+|++|...+.||+|+||.||+|.+.+|+.||||++....... .++|.+|+.++++++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 456799999999999999999999999999999999999999999887654221 456999999999999999999999
Q ss_pred EeeeCc-eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 647 YCINGS-ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 647 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
||.+++ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+..+||||||||+|||+|++++
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999988 599999999999999999773221 8999999999999999999999988789999999999999999999
Q ss_pred EEEecccccccCCC-CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002346 726 AKVADFGLVKNAPD-GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 726 ~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~ 804 (933)
+||+|||+|+..+. ........ .||.+|+|||++..+..+.|+|||||||+++|++||+.|.+...+.....++.|..
T Consensus 216 aKlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred EEccCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99999999976654 32221111 89999999999999999999999999999999999999999776666666899987
Q ss_pred HHhhccCCCCcccCCCCCCChhh-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 805 RVLISKENIPKAIDPNLNLDEET-IESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
..+. ...+.+.+|+.+...... .+++.++..++.+|++.+|++||+|.||+++|+.+.
T Consensus 295 ~~~~-~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 295 PLLE-EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHH-CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 6665 448999999998744444 378888999999999999999999999999996543
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=382.10 Aligned_cols=250 Identities=25% Similarity=0.420 Sum_probs=208.4
Q ss_pred ccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-eeEEEEeec
Q 002346 584 SEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 661 (933)
+.++.||+|..|+|||+.. .+++.+|+|++... ..+...+++.+|++++++.+||+||.+||.|.... ...++||||
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 3467899999999999955 57899999999544 35666789999999999999999999999999988 599999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++|+|++++.. .+.+++....+|+.+|++||.|||+ .++||||||||+|||++.+|+|||||||.++...+.
T Consensus 161 DgGSLd~~~k~-----~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 161 DGGSLDDILKR-----VGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred CCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999965 2569999999999999999999996 389999999999999999999999999999876654
Q ss_pred ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh-ccCCCCcccCCC
Q 002346 742 YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI-SKENIPKAIDPN 820 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~ 820 (933)
....++||..|||||.+.+..|+.++||||||++++|+++|+.|+....+ ......+.+..+.. ....+++.
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~-~~~~~~~Ll~~Iv~~ppP~lP~~---- 305 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP-PYLDIFELLCAIVDEPPPRLPEG---- 305 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC-CCCCHHHHHHHHhcCCCCCCCcc----
Confidence 44567999999999999999999999999999999999999999987521 11122222223332 12222221
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....++..++..|+++||.+||++.|+++
T Consensus 306 --------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 306 --------EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred --------cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12246889999999999999999999987
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-45 Score=393.93 Aligned_cols=260 Identities=34% Similarity=0.556 Sum_probs=213.0
Q ss_pred ccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-eeEEEEeecC
Q 002346 584 SEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYMP 662 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 662 (933)
.+.+.||+|+||+||+|.+.....||||++.....+....++|.+|+.+|++++|||||+++|+|.+.. ..++||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 345669999999999999954444999999887666555789999999999999999999999999887 7899999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCC-eEecCCCCCcEEecCCC-cEEEecccccccCCCC
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS-FIHRDLKPSNILIGDDM-RAKVADFGLVKNAPDG 740 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~~ 740 (933)
+|+|.++++.. ....+++..++.++.+||+|+.|||+ .+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus 124 ~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 124 GGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 99999999763 24679999999999999999999999 66 99999999999999998 9999999999866543
Q ss_pred CceeecccccccCcccccccC--CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 741 KYSVETRLAGTFGYLAPEYAA--TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
. ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+... .. .... ... +..+.
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~---~~---~v~~-~~~-Rp~~p 268 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV---AS---AVVV-GGL-RPPIP 268 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH---HH---HHHh-cCC-CCCCC
Confidence 2 1223368999999999999 56899999999999999999999999987654211 11 1111 111 11111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcC
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWK 867 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 867 (933)
.. ....+..++.+||+.||++||++.+++..|+.++....
T Consensus 269 ~~---------~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 269 KE---------CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred cc---------CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 11 22467789999999999999999999999998876544
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-45 Score=392.78 Aligned_cols=249 Identities=24% Similarity=0.464 Sum_probs=216.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.+|...++||+|||+.||.++. ..|+.||+|++.+... .....+...+|+++.++|+|||||+++++|++....|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999965 8999999999987543 3455678999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|+|++++|.+++++ .+++++.+++.+++||+.||.|||+ ++|||||||..|++++++.++||+|||+|....
T Consensus 98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999999965 3679999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.+.. .....+|||.|.|||++.....+..+||||+||+||.|++|++||+... +.+...++...+..+|..+.
T Consensus 170 ~~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vkety~~Ik~~~Y~~P~~ls 242 (592)
T KOG0575|consen 170 YDGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------VKETYNKIKLNEYSMPSHLS 242 (592)
T ss_pred Cccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------HHHHHHHHHhcCcccccccC
Confidence 5433 2345799999999999998899999999999999999999999998642 22334444444444444222
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+..++|.++|+.+|.+||++++|+.
T Consensus 243 -------------~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 243 -------------AEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -------------HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34669999999999999999999986
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-46 Score=364.45 Aligned_cols=262 Identities=25% Similarity=0.388 Sum_probs=216.5
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEe-EeeeCce-eEEE
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG-YCINGSE-RLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 657 (933)
.+|++.++||+|.||+|||+ ++.+|..||.|.+.-+..+.+..++...|+.++++|+|||||++++ .+.++.+ .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45778899999999999999 6779999999999988788888899999999999999999999998 4444444 7899
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQ-QSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||++|+|.+.++..+.+ .+.+++.++|+++.|+++||.++|+... .-|+||||||.||+++.+|.|||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999886654 4779999999999999999999998432 2488999999999999999999999999998
Q ss_pred CCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
..... .....++|||.||+||.+.+..|+.|+||||+||++|||+.-++||.+. .+.....++... +.+.
T Consensus 178 l~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qg--d~~~- 247 (375)
T KOG0591|consen 178 LSSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQG--DYPP- 247 (375)
T ss_pred hcchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcC--CCCC-
Confidence 77644 3446689999999999999999999999999999999999999999864 233333343332 2211
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
++ .......+..+|..|+..||+.||+...+++.+..
T Consensus 248 ----~p----~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 248 ----LP----DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ----Cc----HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11 12233457789999999999999996666555544
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=373.11 Aligned_cols=206 Identities=29% Similarity=0.512 Sum_probs=186.3
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..+|...+.||.|+||+||+|+. +++..||||.+.+.....+..+.+..|+.+++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35788888999999999999955 46899999999888766777788899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC------CcEEEeccc
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD------MRAKVADFG 732 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~------~~~kl~DfG 732 (933)
|||.||+|.+|++. .+.+++.+++.++.|+|.|+++||+ ++||||||||+|||++.. -.+||+|||
T Consensus 89 EyC~gGDLs~yi~~-----~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR-----RGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 99999999999977 2469999999999999999999999 999999999999999865 468999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD 795 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~ 795 (933)
+|+...++. .....+|+|-|||||++..++|+.|+|+||+|+++||+++|+.||+...+.+
T Consensus 161 fAR~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e 221 (429)
T KOG0595|consen 161 FARFLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE 221 (429)
T ss_pred hhhhCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence 999887644 2345799999999999999999999999999999999999999998765543
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-45 Score=372.56 Aligned_cols=261 Identities=28% Similarity=0.459 Sum_probs=210.7
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCch-----hHHHHHHHHHHHHhcCCCcceeEEeEeeeCc
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNK-----GLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 652 (933)
..+.|.+.+.||+|+||.|-+| ..++|+.||||++.+...... .....++|+++|++|+|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4577888999999999999999 567899999999987643321 1234679999999999999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC---CcEEEe
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVA 729 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~ 729 (933)
..|+||||++||+|.+++-. .+.+.+.....+++|++.|+.|||+ +||+||||||+|||+..+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~-----nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVA-----NKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHHh-----ccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEec
Confidence 99999999999999999966 3557788889999999999999999 999999999999999766 789999
Q ss_pred cccccccCCCCCceeecccccccCcccccccCCCCC---CCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHH
Q 002346 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRV---TTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRV 806 (933)
Q Consensus 730 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~ 806 (933)
|||+|+....+ .....++|||.|.|||++.+..+ ..|+|+||+||++|-+++|.+||....... .+.. .+
T Consensus 322 DFGlAK~~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~e---QI 394 (475)
T KOG0615|consen 322 DFGLAKVSGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKE---QI 394 (475)
T ss_pred ccchhhccccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHH---HH
Confidence 99999988743 34556799999999999976543 348899999999999999999998754322 1111 11
Q ss_pred hhccCCCCcccCCCCCCChhhH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCCC
Q 002346 807 LISKENIPKAIDPNLNLDEETI-ESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPAT 870 (933)
Q Consensus 807 ~~~~~~~~~~~d~~l~~~~~~~-~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~ 870 (933)
....... ....| ....+..++|.+||..||++||+++|+++ ++|....
T Consensus 395 ~~G~y~f----------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~------hpW~~~~ 443 (475)
T KOG0615|consen 395 LKGRYAF----------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN------HPWFKDA 443 (475)
T ss_pred hcCcccc----------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc------Chhhhcc
Confidence 1111111 11122 22346779999999999999999999987 7887543
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-44 Score=381.69 Aligned_cols=253 Identities=32% Similarity=0.527 Sum_probs=213.1
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
.++.||+|-||.||.|.+.....||+|.++....+ .++|.+|+++|++|+|++||+++|+|..++..+||||||+.|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 45789999999999999977779999999876443 368999999999999999999999999988999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+||+. .....+...+.+.++.|||+|++||++ +++|||||.++||||+++..+||+|||+|+...++.+..
T Consensus 287 sLl~yLr~---~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 287 SLLDYLRT---REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred cHHHHhhh---cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 99999975 234668999999999999999999999 899999999999999999999999999999777777766
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
.....-+..|.|||.+..+.++.|||||||||+||||+| |+.|+......+. +. .+.....++.
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev---~~----~le~GyRlp~-------- 425 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV---LE----LLERGYRLPR-------- 425 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH---HH----HHhccCcCCC--------
Confidence 666566779999999999999999999999999999999 7778776543222 11 1222333322
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
...+ +.++.+++..||+.+|++|||++.+...|+++..
T Consensus 426 P~~C---P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 426 PEGC---PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCC---CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 1122 2356789999999999999999999888877654
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-43 Score=394.61 Aligned_cols=261 Identities=29% Similarity=0.480 Sum_probs=214.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
.+....+.||+|+||+||+|+.. +...||||.++... +.+...+|++|++++..++|||||+++|.|.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 34456788999999999999653 35679999998764 445788999999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccC-----CC----CCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDH-----GY----TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~-----~~----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
++|+|||..|||.+||...... +. .+++..+.+.||.|||.|++||-+ +.+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceE
Confidence 9999999999999999764221 12 238999999999999999999998 89999999999999999999
Q ss_pred EEEecccccccCCCCCceeec-ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHH
Q 002346 726 AKVADFGLVKNAPDGKYSVET-RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWF 803 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~ 803 (933)
|||+|||+++.....+++... ...-..+|||||.+..++||.+||||||||+|||+++ |+.||.+...++....+.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~-- 719 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR-- 719 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--
Confidence 999999999977666654432 3345679999999999999999999999999999999 889998865544332221
Q ss_pred HHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 804 RRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 804 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
.+.+-. -+.+.+.++..|+..||+..|++||+++||-..|+...
T Consensus 720 ------~g~lL~----------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 720 ------AGQLLS----------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred ------cCCccc----------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 111100 11122346789999999999999999999999987654
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=362.54 Aligned_cols=243 Identities=26% Similarity=0.424 Sum_probs=206.6
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCch-hHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNK-GLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.++|+++++||+|+||.||.++. ++++.+|+|++++...... +.+...+|..++.+++||.||+++..|++++..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 36789999999999999999954 5689999999998765443 567889999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
+||+.||.|..+|.+ .+.+++..+.-++.+|+.||.|||+ ++|||||+||+|||+|.+|+++|+|||+++..
T Consensus 104 ld~~~GGeLf~hL~~-----eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-----EGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EeccCCccHHHHHHh-----cCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 999999999999965 3679999999999999999999999 99999999999999999999999999999955
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc-CCCCcc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK-ENIPKA 816 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 816 (933)
..... .+..++||+.|||||++.+..|+.++|.||+|+++|||++|.+||..... ..++..+...+ ...+..
T Consensus 176 ~~~~~-~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~------~~~~~~I~~~k~~~~p~~ 248 (357)
T KOG0598|consen 176 LKDGD-ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV------KKMYDKILKGKLPLPPGY 248 (357)
T ss_pred ccCCC-ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH------HHHHHHHhcCcCCCCCcc
Confidence 44332 33457999999999999999999999999999999999999999987532 23344444433 111111
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRP 850 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP 850 (933)
++ .+..+++.+++..+|++|.
T Consensus 249 ls-------------~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 LS-------------EEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CC-------------HHHHHHHHHHhccCHHHhc
Confidence 21 3466899999999999996
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=351.28 Aligned_cols=262 Identities=25% Similarity=0.415 Sum_probs=215.0
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.+.|++.+.||.|..++||+| ..+.++.||||++..+..... .+.+++|+..|+.++||||++.+..|..+...|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 367899999999999999999 556789999999988764443 789999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
.||.+|++.+.++.....+ +++..+..|.+++++||.|||. +|.||||||+.||||+.+|.|||+|||.+....
T Consensus 104 pfMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred hhhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 9999999999998765544 8999999999999999999998 899999999999999999999999999876443
Q ss_pred CCCceee---cccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVE---TRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
+...... ...+||++|||||++.. ..|+.|+||||||++..||.+|+.||....|.....+ .+... .
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~------tLqn~--p 249 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL------TLQND--P 249 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH------HhcCC--C
Confidence 3322221 45689999999999654 3689999999999999999999999998876544221 12211 2
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+...-..+. .+........+.+++..|+++||++|||++++++
T Consensus 250 p~~~t~~~~-~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 250 PTLLTSGLD-KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCcccccCC-hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 211111111 2233444557889999999999999999999875
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.9e-42 Score=359.44 Aligned_cols=270 Identities=24% Similarity=0.340 Sum_probs=214.0
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLL 656 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 656 (933)
.+.|+.+++||+|+||.||+| +..+|+.||+|+++.+...+.......+||.+|++|+||||+++.+...+. ...|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 355677788999999999999 567899999999998876666777789999999999999999999998876 68999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
|+|||+. +|.-++.. ....+++.++..++.|+++||+|||+ ++|+|||||.+|||||.+|.+||+|||+|+.
T Consensus 196 VFeYMdh-DL~GLl~~----p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS----PGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred EEecccc-hhhhhhcC----CCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceee
Confidence 9999976 88777743 23579999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc----cC
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS----KE 811 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----~~ 811 (933)
+........+..+-|..|.|||.+.+. .|+.+.|+||.||+|.||++|++.|.+..+.++.+.+--+-..... ..
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 877665556777889999999988765 7999999999999999999999999887654443332211110000 01
Q ss_pred CCC--cccCCCCCC----ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIP--KAIDPNLNL----DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~--~~~d~~l~~----~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.++ ..+.+.-.. .+..........+|+..+|..||.+|.|+.++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111 111111110 0111122345678999999999999999999986
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=360.47 Aligned_cols=251 Identities=24% Similarity=0.397 Sum_probs=213.2
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCch-hHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNK-GLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 656 (933)
..+|..++.||+|+|++||+| +.+.++.||||++.+.-...+ ..+-..+|-.+|.+| .||.|++++..|.++...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 467889999999999999999 456799999999987654332 234567899999999 89999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
|+||+++|+|.++|+. .+.+++...+.++.+|+.||+|||+ +|||||||||+|||+|++|++||.|||.|+.
T Consensus 152 vLe~A~nGdll~~i~K-----~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKK-----YGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEecCCCcHHHHHHH-----hCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999976 3679999999999999999999999 9999999999999999999999999999986
Q ss_pred CCCCCc----------eee--cccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002346 737 APDGKY----------SVE--TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 737 ~~~~~~----------~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~ 804 (933)
..+... ... ..++||..|.+||++..+..+..+|+|+|||++|+|+.|++||.+..+ ...++
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne------yliFq 297 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE------YLIFQ 297 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH------HHHHH
Confidence 543221 111 458999999999999999999999999999999999999999977532 23355
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+++.....+++.++ ..+.+|+.+.|..||.+|++.+||.+
T Consensus 298 kI~~l~y~fp~~fp-------------~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP-------------EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcccCCCCCC-------------HHHHHHHHHHHccCccccccHHHHhh
Confidence 55555555555443 24569999999999999999998876
No 15
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=360.29 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=215.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|.+.+.||+|.||.||||+. .+.+.||+|.+.+....+++.+.+.+|+++++.++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5788889999999999999954 568999999999888788888999999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+.| +|.+++.+ .+.++++.+..|+.+++.||.|||+ .+|+|||+||+|||++..+++|++|||+|+....
T Consensus 82 ~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9976 99999966 3669999999999999999999999 8999999999999999999999999999997665
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
. ..+.+...|||-|||||...++.|+..+|.||+||++||+++|++||... . +...+..+..+....+.
T Consensus 153 ~-t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~---s---i~~Lv~~I~~d~v~~p~---- 221 (808)
T KOG0597|consen 153 N-TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR---S---ITQLVKSILKDPVKPPS---- 221 (808)
T ss_pred C-ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH---H---HHHHHHHHhcCCCCCcc----
Confidence 3 35567789999999999999999999999999999999999999999753 2 22233333332222221
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+..++...+.+||.+|.+..+++.
T Consensus 222 ---------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 ---------TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---------cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 33356789999999999999999999875
No 16
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-42 Score=375.22 Aligned_cols=281 Identities=25% Similarity=0.436 Sum_probs=227.1
Q ss_pred CCCccccCCceeecHHHHHHHhcCCccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHH
Q 002346 559 SDRHLFEGGNVAISIEVLRQVTDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLT 634 (933)
Q Consensus 559 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~ 634 (933)
.+++.+++++..+-.-.-+.-.....+.++||.|.||.||+|+++ ....||||.++.. .+++++.+|..|+.+|.
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMG 685 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMG 685 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcc
Confidence 344555554433222122222345678899999999999999764 2457999999876 46778899999999999
Q ss_pred hcCCCcceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCC
Q 002346 635 KVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714 (933)
Q Consensus 635 ~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik 714 (933)
+++||||+++.|+.......++|+|||++|+|+.||+.. .+.+++-+...++++||.|+.||.+ .++|||||.
T Consensus 686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLA 758 (996)
T KOG0196|consen 686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLA 758 (996)
T ss_pred cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhh
Confidence 999999999999999999999999999999999999762 2459999999999999999999999 899999999
Q ss_pred CCcEEecCCCcEEEecccccccCCCCCceeeccccc--ccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCC
Q 002346 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG--TFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDT 791 (933)
Q Consensus 715 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~ 791 (933)
++|||++.+..+|++|||+++...++.....+...| ..+|.|||.+...+++.++||||||++|||.++ |.+||.+.
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm 838 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 838 (996)
T ss_pred hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence 999999999999999999999776655333333333 469999999999999999999999999999887 99999887
Q ss_pred CCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 792 MPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
..++... .+.....+|..+ +.+..+.+|+..||++|-.+||.++|++..|.+++.+
T Consensus 839 SNQdVIk-------aIe~gyRLPpPm-----------DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 839 SNQDVIK-------AIEQGYRLPPPM-----------DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred chHHHHH-------HHHhccCCCCCC-----------CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 5543322 222344444433 3345688999999999999999999999999988644
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=335.10 Aligned_cols=267 Identities=22% Similarity=0.342 Sum_probs=206.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+.|+.+.++|+|+||+|||.+. .+|+.||||++.....++...+-..+|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 4677888999999999999965 469999999998776566666778999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||+. ++.+-|..+. ..++...+.++++|+++|+.|+|+ +++|||||||+|||++.+|.+||||||+|+....
T Consensus 82 ~~dh-TvL~eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP----NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecch-HHHHHHHhcc----CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 9976 4444444322 237888999999999999999999 8999999999999999999999999999997763
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH--------HHHHHhhcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT--------WFRRVLISK 810 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~--------~~~~~~~~~ 810 (933)
. ....+.++.|..|.|||.+.+ ..|+..+|||++||++.||++|.+-|.+.++-+....+. ....++...
T Consensus 154 p-gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 154 P-GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred C-cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 2 233467789999999999877 689999999999999999999999888765444322211 001111111
Q ss_pred C-----CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 E-----NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 ~-----~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .+|+.-++.-- +..-.....-+++++..|++.||++|++-+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epL-e~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPL-ERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccch-hhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1 11111111100 0011122234679999999999999999999874
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=349.31 Aligned_cols=252 Identities=28% Similarity=0.499 Sum_probs=200.6
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc--eeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS--ERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 657 (933)
.+|...+.||+|+||.||++... +|+..|||.+.... ....+.+.+|+.+|++++|||||+.+|...... .++++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~--~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED--SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc--chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 45777899999999999999654 48999999987762 122677899999999999999999999855444 68899
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEeccccccc
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGLVKN 736 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~ 736 (933)
|||+++|+|.+++.+. +. .+++..+..+.+||++||+|||+ ++||||||||+|||++. ++.+||+|||+++.
T Consensus 95 mEy~~~GsL~~~~~~~---g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRY---GG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeccCCCcHHHHHHHc---CC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 9999999999999662 22 69999999999999999999998 99999999999999999 79999999999986
Q ss_pred CCC--CCceeecccccccCcccccccCCCC-CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 737 APD--GKYSVETRLAGTFGYLAPEYAATGR-VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 737 ~~~--~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
... ..........||+.|||||++..+. ...++||||+||++.||+||++||.... + ...++-.+.... ..
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~--~---~~~~~~~ig~~~-~~ 241 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF--E---EAEALLLIGRED-SL 241 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc--c---hHHHHHHHhccC-CC
Confidence 653 2222234578999999999998643 3459999999999999999999997641 1 111111222111 22
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
| .+...+. .+..+++.+|+..+|++||||+++++
T Consensus 242 P-~ip~~ls---------~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 242 P-EIPDSLS---------DEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred C-CCCcccC---------HHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 2 2222222 35669999999999999999999987
No 19
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=326.78 Aligned_cols=238 Identities=29% Similarity=0.434 Sum_probs=210.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|+..+.||.|+||.|..++. .+|..+|+|++.+... ..++.+...+|..+++.+.||+++++++.+.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4677889999999999999955 4688999999987653 3345677889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||++||.|..++++ .+.+++..++-+|.||+.|++|||+ .+|++||+||+|||+|.+|.+||.|||.|+...
T Consensus 124 eyv~GGElFS~Lrk-----~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK-----SGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred eccCCccHHHHHHh-----cCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 99999999999976 3679999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.. +...+|||.|+|||.+.+..|..++|.|+|||++|||+.|.+||....+ ...+.+++..+-..|..++
T Consensus 196 ~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~------~~iY~KI~~~~v~fP~~fs 265 (355)
T KOG0616|consen 196 GR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP------IQIYEKILEGKVKFPSYFS 265 (355)
T ss_pred Cc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh------HHHHHHHHhCcccCCcccC
Confidence 64 3457999999999999999999999999999999999999999998765 2345566766767776665
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCC
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQR 849 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~R 849 (933)
+ .+.+|+...++.|-.+|
T Consensus 266 ~-------------~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 266 S-------------DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred H-------------HHHHHHHHHHhhhhHhh
Confidence 4 34589999999999999
No 20
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-41 Score=358.26 Aligned_cols=267 Identities=26% Similarity=0.467 Sum_probs=215.2
Q ss_pred HHHHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 574 EVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 574 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
++.+...+.+.+.+.||+|.||+||+|.+. -.||||++.....+++..+.|+.|+.++++-+|.||+-+.|||..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 444445566678899999999999999985 369999999998888899999999999999999999999999998877
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.+|+-+|+|.+|+.++|..+ ..++..+.+.||+|||+|+.|||. ++|||||+|..||++.+++.|||+|||+
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred -eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccc
Confidence 99999999999999998732 568999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC--CCCceeecccccccCcccccccCCC---CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 734 VKNAP--DGKYSVETRLAGTFGYLAPEYAATG---RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 734 a~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
+.... .+.. ......|...|||||++..+ +|+..+||||||+++|||+||..||.....+... | ..
T Consensus 535 atvk~~w~g~~-q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi----f----mV 605 (678)
T KOG0193|consen 535 ATVKTRWSGEQ-QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII----F----MV 605 (678)
T ss_pred eeeeeeecccc-ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE----E----Ee
Confidence 86322 1111 11234578899999999644 6899999999999999999999999843222111 1 11
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
..+.+.... .....+...+|.+|+..||..++++||.+.+++..|+.+...
T Consensus 606 GrG~l~pd~------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 606 GRGYLMPDL------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred cccccCccc------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 122111111 111223445788999999999999999999999988877543
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-41 Score=358.29 Aligned_cols=250 Identities=24% Similarity=0.440 Sum_probs=209.9
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
...|...++||+|+.|.||.| +..+++.||||++.... ....+-+.+|+.+|+..+|+|||.+++.|..+++.|+||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 356788899999999999999 56688999999998764 333456889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|||+||+|.+.+.. ..+++.++..|++++++||+|||. ++|+|||||.+|||++.+|.+||+|||++....
T Consensus 350 Eym~ggsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTK------TRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred eecCCCchhhhhhc------ccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 99999999999855 458999999999999999999999 999999999999999999999999999988776
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... .....+|||.|||||+.....|+.|.||||||++++||+-|.+||....+-....+.. ....++.
T Consensus 421 ~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa--------~ng~P~l-- 489 (550)
T KOG0578|consen 421 EEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--------TNGTPKL-- 489 (550)
T ss_pred cccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh--------hcCCCCc--
Confidence 5543 4456799999999999999999999999999999999999999998654432221111 1111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ........+.+++.+||+.|+++|+++.|+++
T Consensus 490 ---k---~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 490 ---K---NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ---C---CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 1 11122346779999999999999999999987
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-40 Score=359.32 Aligned_cols=258 Identities=25% Similarity=0.411 Sum_probs=214.1
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCC---chhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCce
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSE 653 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 653 (933)
..++|.+.+.||+|+||.|+.| ...+++.||+|++...... ....+.+.+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3578999999999999999999 4557899999977664221 123456778999999998 9999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-CcEEEeccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVADFG 732 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfG 732 (933)
.++||||+.+|+|.+++.. .+++.+.++..+++|++.|++|||+ ++|+||||||+|||++.+ +++||+|||
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 9999999999999999965 3668899999999999999999999 899999999999999999 999999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCCCC-CC-CccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAATGR-VT-TKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++... .....++....
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~------~~l~~ki~~~~ 239 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV------PNLYRKIRKGE 239 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH------HHHHHHHhcCC
Confidence 998774 2222345579999999999999877 75 789999999999999999999987322 22233344445
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
..++..++ ..++..++.+|+..+|.+|+++.++++ ++|...
T Consensus 240 ~~~p~~~~------------S~~~~~Li~~mL~~~P~~R~t~~~i~~------h~w~~~ 280 (370)
T KOG0583|consen 240 FKIPSYLL------------SPEARSLIEKMLVPDPSTRITLLEILE------HPWFQK 280 (370)
T ss_pred ccCCCCcC------------CHHHHHHHHHHcCCCcccCCCHHHHhh------Chhhcc
Confidence 55555552 135679999999999999999999984 566543
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.6e-40 Score=317.27 Aligned_cols=266 Identities=26% Similarity=0.386 Sum_probs=209.1
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|...++||+|.||.||+| +.++|+.||||+++.....+.......+|++.++.++|+||+.++++|.+.+..-+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888899999999999999 56789999999999876555555678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||+ .+|...+++ ....++..++..++.++++|++|||+ +.|+||||||.|+|++++|.+||+|||+|+.+..
T Consensus 82 fm~-tdLe~vIkd----~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FMP-TDLEVVIKD----KNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ecc-ccHHHHhcc----cccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 995 599988855 34679999999999999999999999 8999999999999999999999999999998776
Q ss_pred CCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh-ccCCCCccc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI-SKENIPKAI 817 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 817 (933)
.... .+..+-|..|.|||.+.+. .|+...||||.||++.||+-|.+-|.+..+-++ +...++..-. ....+++.-
T Consensus 154 p~~~-~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ--L~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 154 PNRI-QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ--LSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred CCcc-cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH--HHHHHHHcCCCCcccCcccc
Confidence 5432 2333778999999988664 689999999999999999999877766543222 2222221100 011122111
Q ss_pred ---C-------CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 ---D-------PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 ---d-------~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
| |.......-........+++..++..+|.+|.+++|+++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 0 000111111223345689999999999999999999987
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=346.50 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=209.3
Q ss_pred HhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCc-eeE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGS-ERL 655 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~ 655 (933)
+.++|.++++||.|+||.||+|+ ..+|+.||||+++....+.++. --.||++.+++|+ |||||++.+.+.+.+ ..+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 45789999999999999999994 5679999999998876553322 2358999999998 999999999999887 899
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||| ..+|.+.++++ ...+++.+++.|+.||++||+|+|. +|+.|||+||+|||+..+..+||+|||+||
T Consensus 87 fVfE~M-d~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred eeHHhh-hhhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccc
Confidence 999999 56999999763 4789999999999999999999998 999999999999999999999999999999
Q ss_pred cCCCCCceeecccccccCccccccc-CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-----
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYA-ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS----- 809 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----- 809 (933)
...... ..+.++.|..|+|||++ .++.|+.+.|+|++||+++|+++=++-|.+..+.++..-+ ..++-.
T Consensus 159 ev~Skp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI---c~VLGtP~~~~ 233 (538)
T KOG0661|consen 159 EVRSKP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI---CEVLGTPDKDS 233 (538)
T ss_pred ccccCC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH---HHHhCCCcccc
Confidence 776533 23667889999999987 5567899999999999999999999998876543332111 111100
Q ss_pred -----------cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 -----------KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 -----------~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...++......+ ..--.....+.++++.+|+..||.+|||++|+++
T Consensus 234 ~~eg~~La~~mnf~~P~~~~~~l--~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 234 WPEGYNLASAMNFRFPQVKPSPL--KDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred chhHHHHHHHhccCCCcCCCCCh--HHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 011111111111 1111224567889999999999999999999987
No 25
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=348.83 Aligned_cols=249 Identities=25% Similarity=0.427 Sum_probs=213.7
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
..|+..+.||+|.||.|||| +...++.||+|++..+. ...+.++.++|+.++.+++++||.+.|+.+..+...+++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 35667789999999999999 55679999999998875 45567899999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||.||++.+.+.. ...+.+.+..-|++++..|+.|+|. ++.+|||||+.|||+..+|.+|++|||++.....
T Consensus 92 y~~gGsv~~lL~~-----~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 92 YCGGGSVLDLLKS-----GNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HhcCcchhhhhcc-----CCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeec
Confidence 9999999999965 2344888888899999999999999 8999999999999999999999999999987776
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
..... ..++|||.|||||++....|+.|+||||||++.+||++|.+|+....|+... ..+++...|
T Consensus 164 ~~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-------------flIpk~~PP 229 (467)
T KOG0201|consen 164 TVKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-------------FLIPKSAPP 229 (467)
T ss_pred hhhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-------------EeccCCCCC
Confidence 55443 5679999999999999889999999999999999999999999987774332 223344444
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.. .....+.+++..|++++|+.||++.++++
T Consensus 230 ~L~~-----~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 RLDG-----DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cccc-----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 4442 23345889999999999999999999775
No 26
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.7e-40 Score=353.68 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=213.1
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccc-cCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESN-TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.-|+.++.||+|+-|.|-.| ...+|+.+|||++.+. ..+......+.+|+.+|+.+.||||+++|+.+++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34778899999999999999 4568999999999876 344555678899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|.|.+++-. .+++++.++.++++||+.|+.|||. .+|+|||+||+|+|+|.++.+||+|||+|....
T Consensus 92 Eyv~gGELFdylv~-----kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR-----KGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred EecCCchhHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 99999999999965 3779999999999999999999999 899999999999999999999999999998666
Q ss_pred CCCceeecccccccCcccccccCCCCC-CCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRV-TTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
++.- -...+|+|.|+|||++.+.+| +.++||||+||+||.|+||+.||++. . +.....++..+...+|..+
T Consensus 164 ~gkl--LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---N---ir~LLlKV~~G~f~MPs~I 235 (786)
T KOG0588|consen 164 PGKL--LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD---N---IRVLLLKVQRGVFEMPSNI 235 (786)
T ss_pred CCcc--ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc---c---HHHHHHHHHcCcccCCCcC
Confidence 5442 234599999999999999988 57999999999999999999999853 2 2223334445555565544
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .+..+|+.+|+..||++|.|++||.+
T Consensus 236 s-------------~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 236 S-------------SEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred C-------------HHHHHHHHHHhccCccccccHHHHhh
Confidence 3 24669999999999999999999987
No 27
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-39 Score=341.25 Aligned_cols=268 Identities=28% Similarity=0.413 Sum_probs=216.1
Q ss_pred HHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
+...+...+.++||+|-||.|.......+..||||.++... ......+|.+|+++|.+++|||||+++|+|..++.+++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 44456778899999999999999999778999999998774 34456899999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
|+|||++|+|.+|+..+.. ..+.-....+|+.|||.|++||.+ ..+||||+.++|+|++.++++||+|||+++.
T Consensus 613 I~EYmEnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHhcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccc
Confidence 9999999999999977321 224556677899999999999999 8999999999999999999999999999996
Q ss_pred CCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc--CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 737 APDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT--GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 737 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
...+++ +...+.+-+.+|||||.+.-++++.++|||+||+++||+++ ...||.....++. ++-....+...+
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~-- 761 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQG-- 761 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCC--
Confidence 655554 44566677889999999999999999999999999999765 7788876543322 222222221111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
...+-+. +.....++.+++.+||+.+-++||+++++...|.+.
T Consensus 762 ~~~~l~~------P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSR------PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccC------CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111111 112234677999999999999999999999888654
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.1e-39 Score=342.45 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=206.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.++|++++.||+|+||.||.++. .+|+.+|+|++++..+- ..+.+.+..|..+|....+|.||+++..|++.+..|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 47899999999999999999954 56999999999987643 34577889999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||++||++...|.. .+.+++..+..++.+++-|++.+|. .|+|||||||+|+|||..|++||+|||++.-.
T Consensus 220 MEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999966 4679999999999999999999998 89999999999999999999999999997521
Q ss_pred CC----------------------CCce-----ee-------------------cccccccCcccccccCCCCCCCccch
Q 002346 738 PD----------------------GKYS-----VE-------------------TRLAGTFGYLAPEYAATGRVTTKIDV 771 (933)
Q Consensus 738 ~~----------------------~~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv 771 (933)
.. .+.. .. ...+|||.|+|||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 10 0000 00 11369999999999999999999999
Q ss_pred HhHHHHHHHHHcCCCCCCCCCCchh-hHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC
Q 002346 772 YAFGVVLMETITGRKALDDTMPDDR-AHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP 850 (933)
Q Consensus 772 ~SlG~~l~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP 850 (933)
||+||++|||+.|.+||....+.+. ..++.|...... |+..+ + ..+..++|.+|+. ||++|.
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f-----P~~~~--~---------s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF-----PEEVD--L---------SDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC-----CCcCc--c---------cHHHHHHHHHHhc-CHHHhc
Confidence 9999999999999999998877543 334444332221 11111 1 1356799999999 999998
Q ss_pred C---HHHHHH
Q 002346 851 D---MGHAVN 857 (933)
Q Consensus 851 s---~~evl~ 857 (933)
. ++||.+
T Consensus 435 G~~G~~EIK~ 444 (550)
T KOG0605|consen 435 GSKGAEEIKK 444 (550)
T ss_pred CcccHHHHhc
Confidence 6 555543
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7e-39 Score=355.68 Aligned_cols=264 Identities=25% Similarity=0.442 Sum_probs=206.2
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC-
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING- 651 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 651 (933)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++..+ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 46899999999999999999953 235689999987542 334456799999999999 899999999988764
Q ss_pred ceeEEEEeecCCCChhhHhhhcccC-------------------------------------------------------
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDH------------------------------------------------------- 676 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 676 (933)
...++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4578999999999999998753210
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce-eecccccccC
Q 002346 677 --GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS-VETRLAGTFG 753 (933)
Q Consensus 677 --~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~ 753 (933)
...++++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++........ ......+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 01358899999999999999999999 89999999999999999999999999999865432221 1223456789
Q ss_pred cccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHH
Q 002346 754 YLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIY 832 (933)
Q Consensus 754 y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 832 (933)
|+|||++.+..++.++|||||||++|||++ |+.||........ .. ........ .. ... ....
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~----~~~~~~~~-~~-~~~---------~~~~ 304 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FC----QRLKDGTR-MR-APE---------NATP 304 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HH----HHHhcCCC-CC-CCC---------CCCH
Confidence 999999998899999999999999999997 9999976433211 11 11111111 10 000 1123
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 833 RVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 833 ~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
.+.+++.+|++.||++||++.|+++.|+.+.+
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 57799999999999999999999999988754
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=375.42 Aligned_cols=266 Identities=29% Similarity=0.484 Sum_probs=215.9
Q ss_pred cCCccCCccccCCCeEEEEEEeCC--Cc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD--GT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
++.+..+.||+|.||.||.|...+ |. .||||.++... +..+..+|.+|..+|+.++|||||+++|.|.+....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 445667899999999999996543 33 48999988763 566788999999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHG--YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
++++|||++|+|..||++.+... ...++..+.+.++.+||+|+.||++ +++|||||.++|+|+++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999998743222 3458999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCceeeccc-ccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKYSVETRL-AGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
+|+...+.++...... .-..+|||||.+..+.++.|+|||||||++||++| |..||......+.... ... .
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~------~~~-g 920 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD------VLE-G 920 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH------HHh-C
Confidence 9996665555443332 33469999999999999999999999999999999 7788876544332211 111 2
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
+.+ ....++. ..+.+++..||+.+|++||++..+++.+..+.....+
T Consensus 921 gRL--------~~P~~CP---~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 921 GRL--------DPPSYCP---EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred Ccc--------CCCCCCC---hHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 221 1122222 3566999999999999999999999999888766544
No 31
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=351.01 Aligned_cols=244 Identities=25% Similarity=0.410 Sum_probs=205.6
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 656 (933)
-++|...++||+|.||+|+.+.. .+++.+|||++++..+ ..++.+..+.|-+++... +||.++.++.+++..++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 46899999999999999999965 4688999999998764 456678889999998888 59999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||+.||++..+.+. +.+++..+.-++..|+-||+|||+ ++|||||||.+|||+|.+|++||+|||+++.
T Consensus 447 vmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence 9999999995544432 569999999999999999999999 9999999999999999999999999999996
Q ss_pred CCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
...... .++.++|||.|||||++.+..|+.++|.|||||+||||+.|..||.+..+++ .+..++..+...|.
T Consensus 518 ~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee------~FdsI~~d~~~yP~- 589 (694)
T KOG0694|consen 518 GMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE------VFDSIVNDEVRYPR- 589 (694)
T ss_pred cCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHhcCCCCCCC-
Confidence 553322 4566899999999999999999999999999999999999999998754332 22333333322222
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
....+.+.++++++.++|++|..+
T Consensus 590 ------------~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 ------------FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ------------cccHHHHHHHHHHhccCcccccCC
Confidence 223467799999999999999977
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=315.80 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=211.2
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++.|++.+.||+|.|+.||+. ...+|+.+|+|.+.....+....+++.+|+++-+.|+|||||++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467888899999999999998 6678999999998877777777889999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC---CcEEEecccccc
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFGLVK 735 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~DfGla~ 735 (933)
|+|+|++|..-+-.. .-+++..+-..++||++||.|+|. ++|||||+||+|+++... ..+|++|||+|.
T Consensus 90 e~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred ecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999998766441 347788899999999999999999 999999999999999643 359999999999
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
....+ .....++|||+|||||++...+|+..+|||+.||++|-|+.|.+||.+.... ..+.++.....+++.
T Consensus 162 ~l~~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~------rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 162 EVNDG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYEQIKAGAYDYPS 233 (355)
T ss_pred EeCCc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH------HHHHHHhccccCCCC
Confidence 88733 3456679999999999999999999999999999999999999999874322 123334443433332
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+.+. .+..+++++|+..||.+|.|+.|+++
T Consensus 234 ~~w~~is---------~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVT---------PEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCC---------HHHHHHHHHHhccChhhhccHHHHhC
Confidence 1111121 34669999999999999999999886
No 33
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-39 Score=350.72 Aligned_cols=260 Identities=27% Similarity=0.462 Sum_probs=208.4
Q ss_pred CCccCCccccCCCeEEEEEEeCC--C---cEEEEEEeccc-cCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 582 NFSEANILGRGGFGVVYGGELPD--G---TKIAVKRMESN-TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
+....++||+|+||.||+|.+.. + ..||||..+.. ........+|..|+++|++++|||||++||++......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 34456899999999999996643 2 23899998863 356778899999999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+|||+|.||+|.++|+... ..++..++..++.+.|+||+|||+ +++|||||.++|+|++.++.+||+|||+++
T Consensus 238 ivmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred EEEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999997622 259999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeec-ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYSVET-RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.... +.... ...-+.+|+|||.+..+.|+.++|||||||++||+++ |..||.+.... .... ++.. ...
T Consensus 311 ~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~---kI~~--~~~ 380 (474)
T KOG0194|consen 311 AGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKA---KIVK--NGY 380 (474)
T ss_pred CCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHH---HHHh--cCc
Confidence 5541 11111 1124579999999999999999999999999999999 78888765332 2222 1211 112
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcC
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWK 867 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 867 (933)
+..... ..+..+..++.+|+..+|++||+|.++.+.++.+.....
T Consensus 381 r~~~~~---------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 381 RMPIPS---------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred cCCCCC---------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 221111 122356678889999999999999999999988865544
No 34
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=9.6e-38 Score=341.17 Aligned_cols=266 Identities=27% Similarity=0.466 Sum_probs=204.9
Q ss_pred hcCCccCCccccCCCeEEEEEEeCC-----------------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPD-----------------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLV 642 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 642 (933)
.++|++.+.||+|+||.||++...+ +..||+|.+.... ......+|.+|++++.+++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 3578899999999999999996432 3469999987653 334467899999999999999999
Q ss_pred eEEeEeeeCceeEEEEeecCCCChhhHhhhccc--------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCe
Q 002346 643 ALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD--------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSF 708 (933)
Q Consensus 643 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 708 (933)
++++++.+.+..++||||+++|+|.+++..... .....+++.+++.++.|+++||+|||+ .+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCc
Confidence 999999999999999999999999999865321 112357889999999999999999999 899
Q ss_pred EecCCCCCcEEecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc--CC
Q 002346 709 IHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT--GR 785 (933)
Q Consensus 709 vH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt--G~ 785 (933)
+||||||+||+++.++.+||+|||+++....... .......++..|+|||++..+.++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999986544332 22234456889999999988899999999999999999987 55
Q ss_pred CCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 786 KALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 786 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.||........ ...................+. .....+.+++.+||+.+|++||++.++.+.|+
T Consensus 240 ~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQV---IENAGEFFRDQGRQVYLFRPP--------PCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHH---HHHHHHHhhhccccccccCCC--------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 67765432221 111211111111000000000 11245789999999999999999999998875
No 35
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=399.07 Aligned_cols=384 Identities=28% Similarity=0.409 Sum_probs=285.4
Q ss_pred CCEEEEEecCCCCccccCccccCCcccceeecccccccccCC-CccCcCcCceeccccccccCCCCCcccCCCCCCEEEc
Q 002346 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (933)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 144 (933)
.+++.|+|++|++++.+|..|+++++|++|+|++|.+++.+| .+.++++|++|+|++|.+++..+..+.++++|+.|+|
T Consensus 212 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 291 (968)
T PLN00113 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291 (968)
T ss_pred CCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEEC
Confidence 478889999999999999999999999999999999988887 7888999999999999998877777888999999999
Q ss_pred cCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccccCC
Q 002346 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLG 223 (933)
Q Consensus 145 s~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~~ 223 (933)
++|.+.+ .+|..+.++++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..+.. ..|+.|+++.|.+.
T Consensus 292 s~n~l~~--~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~ 369 (968)
T PLN00113 292 SDNSLSG--EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369 (968)
T ss_pred cCCeecc--CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE
Confidence 9998887 57888888889999999988888888888888888899999888888888887765 56778888887764
Q ss_pred cccccccccCCccCcEEEecCCccCCCCCC-CCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCC--
Q 002346 224 LSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL-- 300 (933)
Q Consensus 224 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-- 300 (933)
... ...+..+++|+.|++++|.+.+.+|. +..+++|+.|+|++|++++.+|..+..+++|+.|++++|.+++.+|.
T Consensus 370 ~~~-p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 448 (968)
T PLN00113 370 GEI-PEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRK 448 (968)
T ss_pred eeC-ChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhh
Confidence 322 22344455566666666666555543 55556666666666666655665566666666666666666555543
Q ss_pred -CCCCccEEeccCCcCCCCCCCCCCCCCchhhhhH------hhhccc-CCCccccCCCCCCCCCCCCCccccCCCceeEE
Q 002346 301 -FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLL------QIAGDM-GYPAILSDSWEGNNACDGWPFVTCSQGRIITI 372 (933)
Q Consensus 301 -~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L 372 (933)
...+|+.|+|++|++.+..+........+...+. .++..+ ..+.....++.+|+..+.+|..+..+++|+.|
T Consensus 449 ~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 528 (968)
T PLN00113 449 WDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSL 528 (968)
T ss_pred ccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEE
Confidence 2234555555555554433332211000000000 000011 11222345677888889999999999999999
Q ss_pred EccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCCCCCCcccc--cCCCCCCcC
Q 002346 373 NLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGSNVKFT--VSPGNPFIG 450 (933)
Q Consensus 373 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~--~~~~n~~~~ 450 (933)
+|++|.++|.+|..|+++++|+.|+|++|+++|.+|..+..+++|+.|++++|+++|.+|..+....+. ...+||..|
T Consensus 529 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc 608 (968)
T PLN00113 529 DLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLC 608 (968)
T ss_pred ECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999876544432 456888887
Q ss_pred CC
Q 002346 451 TN 452 (933)
Q Consensus 451 ~~ 452 (933)
..
T Consensus 609 ~~ 610 (968)
T PLN00113 609 GG 610 (968)
T ss_pred CC
Confidence 53
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=325.08 Aligned_cols=268 Identities=27% Similarity=0.467 Sum_probs=203.3
Q ss_pred CccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc--CCCcceeEEeEeeeCc----eeEE
Q 002346 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV--RHRHLVALLGYCINGS----ERLL 656 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~----~~~l 656 (933)
.+..++||+|.||.||||.+ +++.||||++.. ++.+.|+.|-.+.+.. +|+||++++++-..+. +++|
T Consensus 212 l~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred hhhHHHhhcCccceeehhhc-cCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34567899999999999999 569999999864 4567899998887765 7999999999877655 8899
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcc------CCCeEecCCCCCcEEecCCCcEEEec
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA------QQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
|+||.+.|+|.+||.. ..++|.+..+|+..+++||+|||+.. +++|+|||||.+|||+..|+++.|+|
T Consensus 286 Vt~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred EeeeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 9999999999999976 56999999999999999999999743 57899999999999999999999999
Q ss_pred ccccccCCCCCce-eecccccccCcccccccCCCC-CC-----CccchHhHHHHHHHHHcCCCCCCC-CCCchhh-----
Q 002346 731 FGLVKNAPDGKYS-VETRLAGTFGYLAPEYAATGR-VT-----TKIDVYAFGVVLMETITGRKALDD-TMPDDRA----- 797 (933)
Q Consensus 731 fGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~SlG~~l~elltG~~p~~~-~~~~~~~----- 797 (933)
||+|..+..+... .....+||.+|||||++.+.. +. .+.||||+|.++|||+++-..++. ..++-..
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 9999877654422 223479999999999996542 22 368999999999999997654431 1111000
Q ss_pred ----HHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcC
Q 002346 798 ----HLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWK 867 (933)
Q Consensus 798 ----~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 867 (933)
-..+.++.....+..- |.++.....-..+.-+.+.+..||+.||+.|.|+.=|-+.+.++...+.
T Consensus 440 vG~hPt~e~mq~~VV~kK~R-----P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQR-----PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hcCCCCHHHHHHHHHhhccC-----CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0011111111111111 1222122222445667899999999999999999999998887765554
No 37
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2e-38 Score=349.90 Aligned_cols=246 Identities=26% Similarity=0.402 Sum_probs=202.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5788999999999999999965 4689999999876532 2234567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 98 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 98 EFVVGGELFTHLRK-----AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred cCCCCChHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 99999999999965 2458899999999999999999999 899999999999999999999999999998664
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... ....|++.|+|||++.+..++.++|||||||++|||++|+.||....+.. ...........++..+
T Consensus 170 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~p~~~- 238 (329)
T PTZ00263 170 DRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IYEKILAGRLKFPNWF- 238 (329)
T ss_pred CCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------HHHHHhcCCcCCCCCC-
Confidence 432 23579999999999998889999999999999999999999997643221 1122222221222211
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
...+.+++.+||+.||++||+ ++++++
T Consensus 239 ------------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 239 ------------DGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ------------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 134679999999999999997 566654
No 38
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-38 Score=336.89 Aligned_cols=248 Identities=18% Similarity=0.346 Sum_probs=200.1
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCch-hHHHHHHHHHHHHhcCCCcceeEEeEeee----CceeEEEEee
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK-GLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSERLLVYEY 660 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 660 (933)
...||+|++|.||+|.. +|+.||||+++....... ..+.|.+|+.++++++|||||++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 789999999986543332 24778899999999999999999999876 3467899999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++|+|.+++.. ...+++..+..++.+++.|++|||+ ..+++||||||+||++++++.+||+|||+++.....
T Consensus 104 ~~~g~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~ 176 (283)
T PHA02988 104 CTRGYLREVLDK-----EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176 (283)
T ss_pred CCCCcHHHHHhh-----CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence 999999999965 2468899999999999999999997 248889999999999999999999999998865432
Q ss_pred CceeecccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 741 KYSVETRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
. ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...........+ ++
T Consensus 177 ~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~------~~~i~~~~~~~~--~~ 244 (283)
T PHA02988 177 P----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI------YDLIINKNNSLK--LP 244 (283)
T ss_pred c----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHhcCCCCC--CC
Confidence 2 23468899999999976 6899999999999999999999999986533211 111111111111 11
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
. .....+.+++.+||+.||++||+++|+++.|+.+
T Consensus 245 ~---------~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 L---------DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred C---------cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1 1123578999999999999999999999998765
No 39
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=322.82 Aligned_cols=251 Identities=23% Similarity=0.399 Sum_probs=210.6
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
...+|++.+.||+|.||.|-+| ....|+.||||.++++.+.. ...-.+.+|+++|+.|+||||+.+|.+|+..+...+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 3467888999999999999999 44689999999998876543 345678999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||..+|.|++|+.+ .+.+++.+++.+++||+.|+.|+|. ++++|||+|.+|||+|.++++||+|||++..
T Consensus 131 vMEYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 131 VMEYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EEEecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhh
Confidence 9999999999999966 3679999999999999999999998 8999999999999999999999999999987
Q ss_pred CCCCCceeecccccccCcccccccCCCCC-CCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAATGRV-TTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
+.+... -..++|+|-|.+||++.+.+| .+.+|-|||||++|.|+.|..||++.. ...++..+. .+...+
T Consensus 203 y~~~kf--LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D---hk~lvrQIs-----~GaYrE 272 (668)
T KOG0611|consen 203 YADKKF--LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD---HKRLVRQIS-----RGAYRE 272 (668)
T ss_pred hccccH--HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch---HHHHHHHhh-----cccccC
Confidence 766542 356799999999999999988 578999999999999999999998752 222332221 111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
|.- +....-+|++|+..+|++|-|..+|....
T Consensus 273 ---P~~---------PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 ---PET---------PSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ---CCC---------CchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 111 12344799999999999999999998743
No 40
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-38 Score=342.01 Aligned_cols=269 Identities=19% Similarity=0.272 Sum_probs=205.1
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||++... +++.||+|++..........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46899999999999999999664 68899999998664444556778899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++++.+..+... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9998776654422 2458899999999999999999998 8999999999999999999999999999987654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH--------HHhhccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR--------RVLISKE 811 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 811 (933)
..........|++.|+|||++.+..++.++|||||||++|||++|+.||......+......... .......
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 33323334578999999999988889999999999999999999999998654322211111000 0000000
Q ss_pred CCCcccCCCCCCCh-----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIPKAIDPNLNLDE-----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~~~~d~~l~~~~-----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+...... ........+.+++.+|++.||++||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 00012345889999999999999999999886
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-39 Score=307.99 Aligned_cols=249 Identities=27% Similarity=0.450 Sum_probs=210.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++++.||+|-||.||.|+. +++-.||+|++.++.... ...+++.+|+++-+.|+||||+++|+++.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 5788999999999999999954 567889999998765432 23467899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||..+|++...|+.. ....+++.....++.|+|.|+.|+|. ++||||||||+|+|++.++..||+|||.+...+
T Consensus 102 Eya~~gel~k~L~~~---~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEG---RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EecCCchHHHHHHhc---ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 999999999999752 23568899999999999999999998 999999999999999999999999999987655
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
. ......+||..|.+||...+..++.++|+|++|++.||++.|.+||.....+ . .++++...+...+..+.
T Consensus 176 ~---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---e---tYkrI~k~~~~~p~~is 246 (281)
T KOG0580|consen 176 S---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---E---TYKRIRKVDLKFPSTIS 246 (281)
T ss_pred C---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH---H---HHHHHHHccccCCcccC
Confidence 3 2335579999999999999999999999999999999999999999875421 1 12233333333333222
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....++|.+|+..+|.+|.+..|+++
T Consensus 247 -------------~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 247 -------------GGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -------------hhHHHHHHHHhccCccccccHHHHhh
Confidence 34679999999999999999999986
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=329.47 Aligned_cols=262 Identities=27% Similarity=0.412 Sum_probs=205.1
Q ss_pred eecHHHHHHHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCC------------chhHHHHHHHHHHHHhc
Q 002346 570 AISIEVLRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMG------------NKGLSEFQAEIAVLTKV 636 (933)
Q Consensus 570 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------------~~~~~~~~~E~~~l~~l 636 (933)
.+...+-...-++|++.+.||+|.||.|-+|. ..+++.||+|++.+.... ....++..+|+.+|+++
T Consensus 86 ~~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl 165 (576)
T KOG0585|consen 86 RYDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL 165 (576)
T ss_pred eecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc
Confidence 33444445556789999999999999999994 457999999999765321 11245889999999999
Q ss_pred CCCcceeEEeEeee--CceeEEEEeecCCCChhhHhhhcccCCCCC-CCHHHHHHHHHHHHHHHHHhhhccCCCeEecCC
Q 002346 637 RHRHLVALLGYCIN--GSERLLVYEYMPRGTLAQHLFEWHDHGYTP-LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713 (933)
Q Consensus 637 ~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 713 (933)
+|||||+++++..+ .+..|||+|||..|.+...-- .++ +++.++++++++++.||+|||. ++||||||
T Consensus 166 ~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~------d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDI 236 (576)
T KOG0585|consen 166 HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP------DKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDI 236 (576)
T ss_pred CCcCeeEEEEeecCcccCceEEEEEeccCCccccCCC------CcccccHHHHHHHHHHHHHHHHHHHh---cCeecccc
Confidence 99999999999876 467899999999888754331 234 9999999999999999999999 89999999
Q ss_pred CCCcEEecCCCcEEEecccccccCCCCCc----eeecccccccCcccccccCCCC----CCCccchHhHHHHHHHHHcCC
Q 002346 714 KPSNILIGDDMRAKVADFGLVKNAPDGKY----SVETRLAGTFGYLAPEYAATGR----VTTKIDVYAFGVVLMETITGR 785 (933)
Q Consensus 714 k~~Nill~~~~~~kl~DfGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlG~~l~elltG~ 785 (933)
||+|+|++++|+|||+|||.+.....+.. ..-...+|||.|+|||...++. .+.+.||||+||+||.|+.|+
T Consensus 237 KPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 237 KPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred chhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 99999999999999999999886633211 1113368999999999987643 357899999999999999999
Q ss_pred CCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 786 KALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 786 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.||.+... ...+.++....-.+++. .+....+.++|.++|++||++|.+..+|..
T Consensus 317 ~PF~~~~~------~~l~~KIvn~pL~fP~~-----------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 317 LPFFDDFE------LELFDKIVNDPLEFPEN-----------PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred CCcccchH------HHHHHHHhcCcccCCCc-----------ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 99976432 22333443322222211 133356779999999999999999999975
No 43
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=341.54 Aligned_cols=251 Identities=28% Similarity=0.453 Sum_probs=205.5
Q ss_pred ceeecHHHHHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeE
Q 002346 568 NVAISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGY 647 (933)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 647 (933)
...++++++.. ++-||.|+.|.||.|++ .++.||||+++.- -..+++-|++|+||||+.+.|+
T Consensus 118 ~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGV 180 (904)
T KOG4721|consen 118 LWEIPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGV 180 (904)
T ss_pred hccCCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhh---------hhhhHHHHHhccCcceeeEeee
Confidence 34556666543 57799999999999999 5789999987532 2367899999999999999999
Q ss_pred eeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEE
Q 002346 648 CINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (933)
Q Consensus 648 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~k 727 (933)
|.....++||||||..|-|.+.|+. ..++.......+..+||.|+.|||. +.|||||||.-||||..+..||
T Consensus 181 CtqsPcyCIiMEfCa~GqL~~VLka-----~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VK 252 (904)
T KOG4721|consen 181 CTQSPCYCIIMEFCAQGQLYEVLKA-----GRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVK 252 (904)
T ss_pred ecCCceeEEeeeccccccHHHHHhc-----cCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEE
Confidence 9999999999999999999999966 3678888999999999999999998 8999999999999999999999
Q ss_pred EecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 728 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|+|||-++...+. .....++||..|||||++...+.++|+||||||||||||+||..||.+...... ++.
T Consensus 253 IsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI------IwG-- 322 (904)
T KOG4721|consen 253 ISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI------IWG-- 322 (904)
T ss_pred eccccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee------EEe--
Confidence 9999999876553 234568999999999999999999999999999999999999999976432111 000
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.....+.-.+. ...+..++-|+++||+..|..||++.+++..|+-+
T Consensus 323 VGsNsL~LpvP---------stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 323 VGSNSLHLPVP---------STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCCcccccCc---------ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 00111111111 12234577899999999999999999999988654
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.6e-38 Score=341.90 Aligned_cols=246 Identities=26% Similarity=0.359 Sum_probs=202.2
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 4788999999999999999965 4689999999875432 2234567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 99999999999965 2468899999999999999999999 899999999999999999999999999988654
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... ....|++.|+|||++.+..++.++|||||||++|||++|+.||....... ...........++..+
T Consensus 153 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~- 221 (291)
T cd05612 153 DRT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG------IYEKILAGKLEFPRHL- 221 (291)
T ss_pred CCc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCcCCCccC-
Confidence 322 23478999999999998889999999999999999999999997653321 1122222222222211
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
...+.+++.+|++.||.+||+ ++++++
T Consensus 222 ------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 222 ------------DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ------------CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 134679999999999999995 777764
No 45
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-37 Score=348.54 Aligned_cols=262 Identities=24% Similarity=0.399 Sum_probs=205.4
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCc
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 652 (933)
.++|++.+.||+|+||.||+|.. .++..||||+++... .....+.+.+|+.++..+ +||||++++++|..++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 35688899999999999999953 245689999987543 233456789999999999 8999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhccc---------------------------------------------------------
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHD--------------------------------------------------------- 675 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 675 (933)
..++||||+++|+|.++++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999999999999965321
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 676 -------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 676 -------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
.....+++..+..++.||++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 011357899999999999999999998 8999999999999999999999999999986544322
Q ss_pred e-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 743 S-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 743 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
. ......++..|+|||++.+..++.++|||||||++|||++ |..||....... ....++. ... ... .+.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~----~~~--~~~-~~~ 340 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIK----EGY--RML-SPE 340 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHH----hCc--cCC-CCC
Confidence 1 1222345678999999999999999999999999999998 888887543221 1111111 110 000 011
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
. ...++.+++.+|++.||++||++.|+++.|++.
T Consensus 341 ~--------~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 C--------APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred C--------CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 123578999999999999999999999998763
No 46
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-37 Score=348.20 Aligned_cols=263 Identities=24% Similarity=0.425 Sum_probs=206.1
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCc
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 652 (933)
.++|++.+.||+|+||.||+|.. .++..||||++.... .......+.+|+++++.+ +|+|||+++++|....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 35788999999999999999853 234579999997653 233456789999999999 8999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhccc---------------------------------------------------------
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHD--------------------------------------------------------- 675 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 675 (933)
..++||||+++|+|.++++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999999864211
Q ss_pred --------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce-eec
Q 002346 676 --------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS-VET 746 (933)
Q Consensus 676 --------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~ 746 (933)
....++++.++++++.|+++||+|||+ ++|+||||||+||++++++.+||+|||+++........ ...
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 011357899999999999999999999 89999999999999999999999999999865433221 122
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCCh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDE 825 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 825 (933)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||........ .. ...... ........
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~----~~~~~~--~~~~~~~~----- 339 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FY----KMVKRG--YQMSRPDF----- 339 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HH----HHHHcc--cCccCCCC-----
Confidence 2345678999999988899999999999999999997 9999976433211 11 111111 11101001
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 826 ETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 826 ~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
...++.+++.+|++.+|++||++.+++++|++++
T Consensus 340 ----~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 ----APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1235789999999999999999999999998764
No 47
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.9e-38 Score=337.82 Aligned_cols=253 Identities=26% Similarity=0.404 Sum_probs=201.6
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|+..+.||+|+||.||+|.. .+|+.||+|++...... ......+.+|+.++++++|++|+++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377889999999999999954 57999999998765322 2234567899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNM---GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 99999999888542 22468999999999999999999998 8999999999999999999999999999986543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... .....|++.|+|||++.+..++.++|||||||++|||++|+.||........... .......... .+..
T Consensus 155 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~----~~~~ 226 (285)
T cd05631 155 GET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE--VDRRVKEDQE----EYSE 226 (285)
T ss_pred CCe--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH--HHHHhhcccc----cCCc
Confidence 321 2345799999999999999999999999999999999999999986543221111 1111111011 1111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
.+ ...+.+++.+||+.+|++||+ ++++++
T Consensus 227 ~~---------s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 227 KF---------SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cC---------CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 11 235679999999999999997 677765
No 48
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.7e-38 Score=312.66 Aligned_cols=267 Identities=24% Similarity=0.334 Sum_probs=206.7
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--CceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 658 (933)
.|+.++.|++|+||.||+|+ .++++.||+|+++.+.......-.-.+|+.++.+++|||||.+..+... -+..|+||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 46667899999999999994 4578999999998765333333456899999999999999999888764 45789999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|||+. +|...+.... .++...++..++.|+++|++|||. +.|+|||+|++|+|+...|.+||+|||+|+.+.
T Consensus 157 e~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 99965 8999886622 579999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
... ...+..+-|..|.|||.+.+. .|+.+.|+||+||++.||+++++-|.+..+.++.+.+ ++. -+.-.+.+
T Consensus 229 sp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I--f~l----lGtPte~i 301 (419)
T KOG0663|consen 229 SPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI--FKL----LGTPSEAI 301 (419)
T ss_pred CCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH--HHH----hCCCcccc
Confidence 653 234566789999999988765 6899999999999999999999999877654443322 111 11111111
Q ss_pred CCCCC---------CChhhH--------H--HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 818 DPNLN---------LDEETI--------E--SIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 818 d~~l~---------~~~~~~--------~--~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
.|.+. ....+. . ....-.+++..++..||.+|-|+.|.++ +.|+..
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~------h~~F~e 366 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK------HEYFRE 366 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc------cccccc
Confidence 11110 000000 0 1134568999999999999999999986 666643
No 49
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.4e-37 Score=331.07 Aligned_cols=257 Identities=22% Similarity=0.379 Sum_probs=204.8
Q ss_pred hcCCccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
.++|++.+.||+|+||.||+|.+. .+..||+|.++... +....+.|.+|+.++++++||||+++++++..+...+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 356889999999999999999642 46689999987653 3344567999999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+++|+|.+++... ...+++.+++.++.|++.|++|||+ ++++||||||+||+++.++.+|++|||.+.
T Consensus 83 lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 83 IVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred EEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 999999999999999652 2468999999999999999999998 899999999999999999999999999876
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
..............++..|+|||++.+..++.++|||||||++||+++ |+.||......+ ... . .......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~---~-~~~~~~~~ 228 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIK---A-VEDGFRLP 228 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---H-HHCCCCCC
Confidence 543222111122345678999999998999999999999999999775 999997654322 111 1 11111111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
..+ .....+.+++.+||+.+|++||++.++.+.|+++
T Consensus 229 --~~~---------~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 229 --APR---------NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --CCC---------CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 111 1224577899999999999999999999988764
No 50
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=324.18 Aligned_cols=274 Identities=26% Similarity=0.402 Sum_probs=213.3
Q ss_pred ecHHHHHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHh--cCCCcceeEEeEe
Q 002346 571 ISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK--VRHRHLVALLGYC 648 (933)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~ 648 (933)
.+.-..+.+..+..+.+.||+|.||.||+|++ .|+.||||++... +.+.+.+|.++.+. |+|+||+.+++.-
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 34556677888999999999999999999999 7999999999654 23566777777665 4999999999876
Q ss_pred eeC----ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhh-----ccCCCeEecCCCCCcEE
Q 002346 649 ING----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHS-----LAQQSFIHRDLKPSNIL 719 (933)
Q Consensus 649 ~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-----~~~~~ivH~Dik~~Nil 719 (933)
..+ .+.|||++|.+.|||.+||.+ .+++....++++..+|.||+|||. +.++.|.|||||+.|||
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL 348 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 348 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence 543 377999999999999999976 578999999999999999999995 34678999999999999
Q ss_pred ecCCCcEEEecccccccCCCCCcee---ecccccccCcccccccCCCC----C--CCccchHhHHHHHHHHHcC------
Q 002346 720 IGDDMRAKVADFGLVKNAPDGKYSV---ETRLAGTFGYLAPEYAATGR----V--TTKIDVYAFGVVLMETITG------ 784 (933)
Q Consensus 720 l~~~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~SlG~~l~elltG------ 784 (933)
+.+++.+.|+|+|+|.......... ....+||.+|||||++...- + -..+||||||.++||++.+
T Consensus 349 VKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi 428 (513)
T KOG2052|consen 349 VKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGI 428 (513)
T ss_pred EccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCE
Confidence 9999999999999998665543222 34579999999999996542 1 2359999999999999863
Q ss_pred ----CCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 785 ----RKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 785 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
+.||.+..+.+... +.+++++ ..+.+.|.++......+.+..+.++++.||..+|..|.|+-.+.+.|.
T Consensus 429 ~eey~~Pyyd~Vp~DPs~--eeMrkVV-----Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 429 VEEYQLPYYDVVPSDPSF--EEMRKVV-----CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred ehhhcCCcccCCCCCCCH--HHHhcce-----eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 35776544432211 1111111 122233444434445567788999999999999999999999999887
Q ss_pred hhh
Q 002346 861 PLV 863 (933)
Q Consensus 861 ~~~ 863 (933)
++.
T Consensus 502 ~l~ 504 (513)
T KOG2052|consen 502 KLS 504 (513)
T ss_pred HHh
Confidence 764
No 51
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-37 Score=345.15 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=199.5
Q ss_pred CCccCCccccCCCeEEEEEEe----CCCcEEEEEEeccccC--CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCcee
Q 002346 582 NFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTM--GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSER 654 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 654 (933)
+|++.+.||+|+||.||++.. .+++.||+|++.+... .....+.+..|+.++..+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999854 3688999999875432 123346788999999999 599999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 81 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 999999999999999865 2458999999999999999999998 89999999999999999999999999999
Q ss_pred ccCCCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
+..............||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... ............+
T Consensus 153 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~~~~~~~~~~~~~ 230 (332)
T cd05614 153 KEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--EVSRRILKCDPPF 230 (332)
T ss_pred ccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH--HHHHHHhcCCCCC
Confidence 86544333333346799999999998765 47889999999999999999999997543222111 1111112111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
+. .+ ...+.+++.+|++.||++|| +++++++
T Consensus 231 ~~----~~---------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 PS----FI---------GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CC----CC---------CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11 11 13467899999999999999 5667765
No 52
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-37 Score=341.89 Aligned_cols=243 Identities=26% Similarity=0.386 Sum_probs=197.3
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
+.||+|+||.||++.. .+|+.||+|+++.... .......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 5789999999976532 2334567889999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-~ 151 (323)
T cd05571 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-T 151 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-c
Confidence 99999865 2468999999999999999999999 8999999999999999999999999999875332211 1
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||....... . ..........++.. +
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~---~~~~~~~~~~~p~~----~--- 218 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---L---FELILMEEIRFPRT----L--- 218 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---H---HHHHHcCCCCCCCC----C---
Confidence 234579999999999998899999999999999999999999997643211 1 11111111122211 1
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
..++.+++.+|++.||++|| ++.++++
T Consensus 219 ------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 219 ------SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ------CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 23567999999999999999 7888875
No 53
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-38 Score=334.98 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=216.2
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce-eEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE-RLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 658 (933)
++|..++++|+|+||.++..+. .++..||+|++.....+....+....|+.++++++|||||.+++.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5788999999999999998843 468899999999888788888889999999999999999999999999888 89999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
+|++||++.+.+.+.+ ..-++++.+..++.|++.|+.|||+ ..|+|||||+.||+++.++.|||+|||+|+...
T Consensus 84 ~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 9999999999997744 3568999999999999999999998 899999999999999999999999999999877
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... .....++|||.|+.||.+.+.+|..|+|||||||++|||++-+++|..... ..++. ++.... ++
T Consensus 158 ~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---~~Li~---ki~~~~------~~ 224 (426)
T KOG0589|consen 158 PED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---SELIL---KINRGL------YS 224 (426)
T ss_pred Cch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---HHHHH---HHhhcc------CC
Confidence 654 234557999999999999999999999999999999999999999987532 22222 222111 11
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
..+..+..++..++..|++.+|+.||++.+++..
T Consensus 225 ------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 ------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1112233567799999999999999999999986
No 54
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7e-37 Score=338.01 Aligned_cols=202 Identities=27% Similarity=0.407 Sum_probs=177.1
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|++.+.||+|+||.||++.. .++..||+|.+.... .....+++.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 36899999999999999999965 468899999987652 3344578999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++.. ...+++..+..++.|+++|++|||+ ..+|+||||||+||+++.++.+||+|||++....
T Consensus 83 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 83 EHMDGGSLDQVLKE-----AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 99999999999965 2458899999999999999999997 2469999999999999999999999999987554
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTM 792 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~ 792 (933)
... .....|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 206 (331)
T cd06649 156 DSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD 206 (331)
T ss_pred ccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 321 234579999999999998899999999999999999999999997543
No 55
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.7e-37 Score=326.85 Aligned_cols=255 Identities=25% Similarity=0.459 Sum_probs=208.0
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 36789999999999999999988788899999886542 235689999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ....+++.++..++.|+++|++|||+ .+++||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 82 YMAKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred cCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999999652 23458899999999999999999998 8999999999999999999999999999987654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||++..+.++.++|||||||++|||++ |+.||....... ....+.. ....+ ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~----~~~~~--~~ 226 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSALQR----GYRMP--RM 226 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHHHc----CCCCC--CC
Confidence 43333333456778999999988889999999999999999998 999997543221 1111111 11111 00
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
. .....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~---------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 E---------NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred C---------CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1 112357799999999999999999999999875
No 56
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.5e-37 Score=343.11 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=204.4
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|... +++.||+|++....... .....+.+|+.++..++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47899999999999999999654 68999999997654322 44567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999999652 468999999999999999999999 899999999999999999999999999987654
Q ss_pred CCC----------------------------ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCC
Q 002346 739 DGK----------------------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDD 790 (933)
Q Consensus 739 ~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~ 790 (933)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 332 1112335799999999999999999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 002346 791 TMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD-MGHAVN 857 (933)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-~~evl~ 857 (933)
...... .................. ....+.+++.+|++ +|.+||+ +.++++
T Consensus 233 ~~~~~~------~~~i~~~~~~~~~p~~~~---------~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 233 DTLQET------YNKIINWKESLRFPPDPP---------VSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCHHHH------HHHHhccCCcccCCCCCC---------CCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 543211 111111011111000000 12457789999997 9999999 999986
No 57
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.6e-37 Score=331.13 Aligned_cols=259 Identities=29% Similarity=0.524 Sum_probs=207.5
Q ss_pred cCCccCCccccCCCeEEEEEEeCC------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
++|++.+.||+|+||.||+|.... ...||+|.+.... ......+|.+|+.++++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 468889999999999999996532 2579999887543 334456799999999999999999999999988899
Q ss_pred EEEEeecCCCChhhHhhhcccCCC-----------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGY-----------TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
+++|||+++++|.+++........ ..+++.+++.++.|++.||+|||+ .+++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCC
Confidence 999999999999999976322111 468899999999999999999999 899999999999999999
Q ss_pred CcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||......+. ..
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~---~~ 237 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV---IE 237 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH
Confidence 9999999999986543322 22334467889999999988899999999999999999998 9999986543221 11
Q ss_pred HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 802 WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.+. ....+. .. .....++.+++.+||+.+|++||+++|+++.|+.
T Consensus 238 ~i~-----~~~~~~-~~---------~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 238 MIR-----SRQLLP-CP---------EDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHH-----cCCcCC-Cc---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111 111111 11 1122468899999999999999999999998864
No 58
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.2e-37 Score=325.54 Aligned_cols=251 Identities=28% Similarity=0.465 Sum_probs=204.1
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
++|++.+.||+|+||.||++...++..+|+|.+..... ..++|..|+.++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 45788899999999999999888888999998875432 246789999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++|+|.++++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||.++.....
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 81 MENGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred CCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999998642 1358899999999999999999998 89999999999999999999999999998866544
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.........++..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+ .. .... ..+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~~i---~~-~~~~---~~~ 223 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVEMI---SR-GFRL---YRP 223 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH---HC-CCCC---CCC
Confidence 3332333345678999999988889999999999999999999 899997643221 11111 11 1110 111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.. ....+.+++.+|++.+|++||+++++++.|
T Consensus 224 ~~--------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 KL--------ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CC--------CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11 113578999999999999999999999876
No 59
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=316.12 Aligned_cols=266 Identities=26% Similarity=0.371 Sum_probs=205.5
Q ss_pred HHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee-----C
Q 002346 578 QVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-----G 651 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~ 651 (933)
.+...|...+.||+|+||.|+++ +..+|+.||+|++..........++..+|+++++.++|+||+.+++.+.. -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34566777899999999999999 55689999999998655556667889999999999999999999998865 3
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
...|+|+|+| +.+|.+.++. ...++...+..+++|+++||.|+|+ .+|+|||+||+|++++.+...||+||
T Consensus 99 ~DvYiV~elM-etDL~~iik~-----~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKS-----QQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHc-----CccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccc
Confidence 5789999999 6799999865 3459999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-ceeecccccccCccccccc-CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH--------
Q 002346 732 GLVKNAPDGK-YSVETRLAGTFGYLAPEYA-ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT-------- 801 (933)
Q Consensus 732 Gla~~~~~~~-~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~-------- 801 (933)
|+|+...... ....+.++.|..|.|||.+ ....|+.+.||||.||++.||++|++-|.+...-+...+..
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 9999775421 1223667889999999987 45689999999999999999999999887653322211110
Q ss_pred ---------HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 802 ---------WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 802 ---------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.++..+......+. ......-........+++.+||..||.+|+|++|+++
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~-----~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPK-----QPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCC-----CCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00111111111110 0000000112234679999999999999999999987
No 60
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.5e-37 Score=341.90 Aligned_cols=254 Identities=22% Similarity=0.324 Sum_probs=203.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+|+.||+|+++.... .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688999999999999999954 4789999999986543 2334567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 999999999999652 1468999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceeecccccccCcccccccC------CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA------TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||........ +.........
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------~~~i~~~~~~ 227 (330)
T cd05601 154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT------YNNIMNFQRF 227 (330)
T ss_pred CCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH------HHHHHcCCCc
Confidence 44433334457999999999986 45678999999999999999999999976533211 1122111111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. . +... ......+.+++..|++ +|++||++.++++
T Consensus 228 ~-~-~~~~-------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 L-K-FPED-------PKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred c-C-CCCC-------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 1 0 0000 0112356789999998 9999999999875
No 61
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-37 Score=339.51 Aligned_cols=240 Identities=25% Similarity=0.342 Sum_probs=194.2
Q ss_pred cccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||.||+|.. .+++.||+|++..... .......+.+|+.++.+++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999965 4688999999875432 334456788999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 151 (312)
T cd05585 81 FHHLQR-----EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTN 151 (312)
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccc
Confidence 999965 2458999999999999999999998 899999999999999999999999999987543322 1223
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............++..+
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~~~~~~~~~~--------- 216 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQEPLRFPDGF--------- 216 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHcCCCCCCCcC---------
Confidence 457999999999999989999999999999999999999999764321 12222222222222211
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002346 827 TIESIYRVAELAGHCTAREPQQRPDMGHAV 856 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RPs~~evl 856 (933)
...+.+++.+||+.||++||++..+.
T Consensus 217 ----~~~~~~li~~~L~~dp~~R~~~~~~~ 242 (312)
T cd05585 217 ----DRDAKDLLIGLLSRDPTRRLGYNGAQ 242 (312)
T ss_pred ----CHHHHHHHHHHcCCCHHHcCCCCCHH
Confidence 13567999999999999998654433
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.5e-37 Score=342.17 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=204.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|... +++.||+|+++..... ......+.+|+.++..++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999664 5899999999765322 234567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 99999999999965 2468899999999999999999998 899999999999999999999999999987554
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +.... .....+...+
T Consensus 153 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~---i~~~~-~~~~~~~~~~ 224 (333)
T cd05600 153 T----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN---LKYWK-ETLQRPVYDD 224 (333)
T ss_pred c----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHH---HHhcc-ccccCCCCCc
Confidence 3 22345799999999999988999999999999999999999999986543322111 11100 0000111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+. .....++.+++.+|++.+|++||++.++++
T Consensus 225 ~~-------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 225 PR-------FNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred cc-------cccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 11 112245778999999999999999999986
No 63
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2e-37 Score=342.34 Aligned_cols=246 Identities=24% Similarity=0.334 Sum_probs=201.0
Q ss_pred cCCccCCccccCCCeEEEEEEeCC--CcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD--GTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
++|++.+.||+|+||.||+|.... +..||+|++..... .....+.+.+|+.+++.++||||+++++++.++...++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 578899999999999999996433 36899999875432 233456788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~Ey~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR-----NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 999999999999965 2468999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
.... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....+... ...........+..
T Consensus 182 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~------~~~i~~~~~~~p~~- 250 (340)
T PTZ00426 182 DTRT----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI------YQKILEGIIYFPKF- 250 (340)
T ss_pred CCCc----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH------HHHHhcCCCCCCCC-
Confidence 4322 235799999999999888899999999999999999999999986533211 11222211112211
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
+. ..+.+++.+|++.+|++|+ +++++++
T Consensus 251 ---~~---------~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 251 ---LD---------NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ---CC---------HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 11 2466899999999999995 7888765
No 64
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.6e-37 Score=338.27 Aligned_cols=243 Identities=27% Similarity=0.432 Sum_probs=196.2
Q ss_pred CccccCCCeEEEEEEe----CCCcEEEEEEeccccC--CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 587 NILGRGGFGVVYGGEL----PDGTKIAVKRMESNTM--GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+.||+|+||.||++.. .+++.||+|+++.... .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999964 3578999999876432 223345678999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.. ...+.+..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 999999999865 2457889999999999999999999 89999999999999999999999999998754332
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. ......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ...........++. .
T Consensus 154 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~~~~~~~~~~----~ 222 (323)
T cd05584 154 GT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKILKGKLNLPP----Y 222 (323)
T ss_pred CC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCCCC----C
Confidence 21 2234579999999999988889999999999999999999999997643221 12222222222221 1
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
+. ..+.+++.+|++.+|++|| ++.++++
T Consensus 223 ~~---------~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 223 LT---------PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CC---------HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11 3567999999999999999 7777765
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.2e-37 Score=338.88 Aligned_cols=241 Identities=26% Similarity=0.407 Sum_probs=192.2
Q ss_pred CccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHH---HhcCCCcceeEEeEeeeCceeEEE
Q 002346 583 FSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVL---TKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
|++.+.||+|+||.||+|.. .+++.||||+++.... .....+.+.+|++++ +.++||||+++++++..+...++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 66789999999999999955 4689999999976532 223345677776655 566799999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|..+++. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 81 MEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 999999999988854 458999999999999999999999 89999999999999999999999999998753
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..... ......|++.|+|||++.+..++.++|||||||++|||++|+.||......+. ...........+.
T Consensus 152 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~------~~~i~~~~~~~p~-- 222 (324)
T cd05589 152 MGFGD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV------FDSIVNDEVRYPR-- 222 (324)
T ss_pred CCCCC-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCCCCC--
Confidence 32221 22345799999999999988999999999999999999999999976533211 1122221111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
.+ ...+.+++.+|++.||.+||++
T Consensus 223 --~~---------~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 223 --FL---------SREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred --CC---------CHHHHHHHHHHhhcCHhHcCCC
Confidence 11 1346789999999999999953
No 66
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.7e-37 Score=333.52 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=200.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|.. .+++.||+|+++... .......+.+|++++++++||||+++++++..+...++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 5689999999999999999954 478999999987543 22234577899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++ ++|.+++... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 84 YLD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred CCC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 997 5999988542 2357899999999999999999998 8999999999999999999999999999875543
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--cCCCCc-
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS--KENIPK- 815 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 815 (933)
... ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||......+..... ...... ...++.
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (288)
T cd07871 156 PTK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLI---FRLLGTPTEETWPGI 231 (288)
T ss_pred CCc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHhCCCChHHhhcc
Confidence 221 1233468999999998865 56899999999999999999999999765433222111 111100 000000
Q ss_pred --------ccCCCCCCCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 --------AIDPNLNLDE---ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 --------~~d~~l~~~~---~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+...... .......+..+++.+|++.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0001100000 00011235679999999999999999999985
No 67
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-37 Score=343.73 Aligned_cols=261 Identities=21% Similarity=0.238 Sum_probs=197.9
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..+|++.+.||+|+||.||++. ..+++.||+|+... ..+.+|++++++++|||||++++++......++|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 3679999999999999999994 45789999996532 35689999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|++. ++|.+++.. ...+++.+++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 163 e~~~-~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 163 PRYK-TDLYCYLAA-----KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred ecCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 9994 789888854 2458899999999999999999999 899999999999999999999999999997543
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch-----hhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD-----RAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 813 (933)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ...+...+...-......
T Consensus 234 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 322222334679999999999998899999999999999999999998875432111 111111110000000000
Q ss_pred Cc-----------------ccCCCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PK-----------------AIDPNLNLD-EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~-----------------~~d~~l~~~-~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+. ...+..... .........+.+++.+||+.||++|||+.|+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 000000000 011123446789999999999999999999986
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.6e-37 Score=338.94 Aligned_cols=243 Identities=26% Similarity=0.387 Sum_probs=196.7
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
+.||+|+||.||++.. .+|+.||+|++..... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999954 5789999999976532 2334567889999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|..++.. ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~ 151 (323)
T cd05595 81 ELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-T 151 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-c
Confidence 99988855 2468999999999999999999998 8999999999999999999999999999875332221 1
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........++..+
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~~~~~~~~~p~~~------- 218 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------FELILMEEIRFPRTL------- 218 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCCCCCCCCC-------
Confidence 2335799999999999988999999999999999999999999976433211 111111121222211
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...+.+++.+|++.||++|| ++.++++
T Consensus 219 ------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 219 ------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ------CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 13567999999999999998 7888765
No 69
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-36 Score=342.09 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=197.4
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|+.++.||+|+||.||+|. ..+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 58889999999999999995 45788999999976532 23445678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 82 YIPGGDMMSLLIR-----MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 9999999999865 2458899999999999999999998 8999999999999999999999999999753211
Q ss_pred CC----------------------------------------------ceeecccccccCcccccccCCCCCCCccchHh
Q 002346 740 GK----------------------------------------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYA 773 (933)
Q Consensus 740 ~~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S 773 (933)
.. ........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 00 00012357999999999998888999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHH--cccCCCCCCCC
Q 002346 774 FGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGH--CTAREPQQRPD 851 (933)
Q Consensus 774 lG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~--cl~~~P~~RPs 851 (933)
|||++|||++|+.||....+..... .......... +.+... ...++.+++.+ |+..+|..||+
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~~------~i~~~~~~~~--~~~~~~-------~s~~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQL------KVINWENTLH--IPPQVK-------LSPEAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHHH------HHHccccccC--CCCCCC-------CCHHHHHHHHHHccCcccccCCCC
Confidence 9999999999999998654322111 1111011110 111111 11345677776 55666777999
Q ss_pred HHHHHH
Q 002346 852 MGHAVN 857 (933)
Q Consensus 852 ~~evl~ 857 (933)
+.++++
T Consensus 299 ~~~~l~ 304 (381)
T cd05626 299 ADDIKA 304 (381)
T ss_pred HHHHhc
Confidence 999986
No 70
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-36 Score=342.03 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=207.2
Q ss_pred hcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCc
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGS 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 652 (933)
.++|.+.++||+|+||.||+|... .+..||||++.... .....+.+.+|++++++++ |||||+++++|.+..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 467889999999999999999642 23479999997643 3344568999999999996 999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccC--------------------------------------------------------
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDH-------------------------------------------------------- 676 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 676 (933)
..++||||+++|+|.++++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 999999999999999998653210
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec
Q 002346 677 -----------------------------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721 (933)
Q Consensus 677 -----------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~ 721 (933)
....+++.++..++.|+++||+|||+ .+|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence 11347889999999999999999998 8999999999999999
Q ss_pred CCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHH
Q 002346 722 DDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHL 799 (933)
Q Consensus 722 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~ 799 (933)
.++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........ .
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~ 349 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--F 349 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--H
Confidence 999999999999986543221 12233457789999999988899999999999999999997 9999876432211 1
Q ss_pred HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 800 VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
. ......... .... .....+.+++.+||+.+|++||++.++.++|+.+.
T Consensus 350 ~----~~~~~~~~~--~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 Y----NKIKSGYRM--AKPD---------HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred H----HHHhcCCCC--CCCc---------cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1 111111111 0111 12246789999999999999999999999998764
No 71
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.5e-37 Score=335.74 Aligned_cols=239 Identities=26% Similarity=0.374 Sum_probs=188.6
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHH-HHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIA-VLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|++..... ......++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 4688999999876432 1223345555654 57888999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
++|..++.. ...+++.++..++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~ 151 (321)
T cd05603 81 GELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-E 151 (321)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-C
Confidence 999988854 2458889999999999999999998 899999999999999999999999999987532222 1
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ........... +.+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~----~~~~--- 218 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ------MYDNILHKPLQ----LPGG--- 218 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH------HHHHHhcCCCC----CCCC---
Confidence 2234579999999999998899999999999999999999999997643211 11222211111 1111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMG 853 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~ 853 (933)
....+.+++.+|++.+|.+||++.
T Consensus 219 ------~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 219 ------KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ------CCHHHHHHHHHHccCCHhhcCCCC
Confidence 113577999999999999999864
No 72
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.6e-37 Score=337.99 Aligned_cols=243 Identities=25% Similarity=0.384 Sum_probs=197.2
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 5789999999976532 2344567889999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-~ 151 (328)
T cd05593 81 ELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-T 151 (328)
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc-c
Confidence 99988854 2468999999999999999999998 8999999999999999999999999999875432211 1
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........++. .+
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~------~~~~~~~~~~~p~----~~--- 218 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELILMEDIKFPR----TL--- 218 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH------HHHhccCCccCCC----CC---
Confidence 2345799999999999988999999999999999999999999976432211 1111111111221 11
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...+.+++.+|++.||++|| ++.++++
T Consensus 219 ------~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 219 ------SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred ------CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 13567999999999999997 7888875
No 73
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.3e-36 Score=339.74 Aligned_cols=258 Identities=21% Similarity=0.291 Sum_probs=201.3
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
+....++|++.+.||+|+||.||++.. .+++.||+|++.+... .....+.+.+|+.+++.++||||+++++++..+..
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 344467899999999999999999965 4688999999875322 22334568899999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEeccc
Confidence 9999999999999999854 347889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCCC----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAATG----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
+...............||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+......
T Consensus 189 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~------~~~~i~~~ 262 (370)
T cd05621 189 CMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG------TYSKIMDH 262 (370)
T ss_pred ceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH------HHHHHHhC
Confidence 986644332223456799999999998653 37889999999999999999999997643211 11122211
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQ--RPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~--RPs~~evl~ 857 (933)
...+. +.... .....+.+++..|++.++.+ ||++.|+++
T Consensus 263 ~~~~~--~p~~~-------~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 263 KNSLN--FPEDV-------EISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CcccC--CCCcc-------cCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 11111 11100 11234668888999855544 889999886
No 74
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.2e-37 Score=331.60 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=197.7
Q ss_pred cCCccCCccccCCCeEEEEEEe--CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc---CCCcceeEEeEeee-----
Q 002346 581 DNFSEANILGRGGFGVVYGGEL--PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV---RHRHLVALLGYCIN----- 650 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 650 (933)
++|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3789999999999999999965 3468899999876543343445667788777766 69999999998852
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
....++||||++ ++|.+++.... ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcc
Confidence 356789999996 69999986522 2458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh-hc
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL-IS 809 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~ 809 (933)
||+++...... ......|++.|+|||++.+..++.++|||||||++|||++|++||......+.. ...+.... ..
T Consensus 154 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~--~~i~~~~~~~~ 229 (290)
T cd07862 154 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GKILDVIGLPG 229 (290)
T ss_pred ccceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH--HHHHHHhCCCC
Confidence 99998654331 223457899999999998888999999999999999999999999875432211 11111100 00
Q ss_pred cCCCCc-------ccCCCCC--CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPK-------AIDPNLN--LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~-------~~d~~l~--~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...++. .+.+... ......+....+.+++.+|++.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 001110 0000000 00000112245679999999999999999999985
No 75
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9e-37 Score=342.33 Aligned_cols=253 Identities=22% Similarity=0.394 Sum_probs=200.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++..++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4789999999999999999955 4689999999976432 2234567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMK-----KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 99999999999965 2458999999999999999999999 899999999999999999999999999987533
Q ss_pred CCCce-------------------------------------eecccccccCcccccccCCCCCCCccchHhHHHHHHHH
Q 002346 739 DGKYS-------------------------------------VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMET 781 (933)
Q Consensus 739 ~~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~el 781 (933)
..... .....+||+.|+|||++....++.++|||||||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 21100 01124699999999999988999999999999999999
Q ss_pred HcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 002346 782 ITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD---MGHAVN 857 (933)
Q Consensus 782 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs---~~evl~ 857 (933)
++|+.||....+... ..........+. +..... ....+.+++.+|+. +|.+|++ +.++++
T Consensus 233 ~~G~~Pf~~~~~~~~------~~~i~~~~~~~~--~~~~~~-------~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 233 LVGYPPFCSDNPQET------YRKIINWKETLQ--FPDEVP-------LSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hcCCCCCCCCCHHHH------HHHHHcCCCccC--CCCCCC-------CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999986543221 111111111111 111111 11346688999986 9999998 888865
No 76
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.2e-36 Score=322.78 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=206.5
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.+.||+|+||.||+|...+++.||+|.++.... ..+++.+|+.++++++||||+++++++......++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 467889999999999999999877788999999876532 34678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.... ...+++.++..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 82 LMKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred cccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 999999999996522 2468999999999999999999998 8999999999999999999999999999986654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ... . .......+ ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~---~-~~~~~~~~--~~ 226 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQ---Q-VDQGYRMP--CP 226 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---H-HHcCCCCC--CC
Confidence 32222222233468999999998899999999999999999999 999987543221 111 1 11111110 11
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
. .....+.+++.+|++.+|++||++.++++.|++
T Consensus 227 ~---------~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 P---------GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred C---------cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1 112457899999999999999999999999875
No 77
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.7e-37 Score=340.46 Aligned_cols=254 Identities=25% Similarity=0.365 Sum_probs=196.5
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|+..+.||+|+||.||+|.. .+++.||||++.... .......+.+|+++++.++|+||+++++++..++..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 3456678999999999999965 468999999986542 33445678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+.. ...+..+..++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 153 ~~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 153 FMDGGSLEGTH---------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred cCCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 99999986532 24577888999999999999998 8999999999999999999999999999886543
Q ss_pred CCceeecccccccCcccccccCC-----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
... ......||..|+|||++.. ...+.++|||||||++|||++|+.||......+...... ...... .
T Consensus 221 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~---~~~~~~---~ 293 (353)
T PLN00034 221 TMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC---AICMSQ---P 293 (353)
T ss_pred ccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH---HHhccC---C
Confidence 221 1234579999999998743 234568999999999999999999997433222111111 111100 0
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
..... ....++.+++.+||+.+|++||++.|+++ ++|...
T Consensus 294 ~~~~~---------~~~~~l~~li~~~l~~~P~~Rpt~~ell~------hp~~~~ 333 (353)
T PLN00034 294 PEAPA---------TASREFRHFISCCLQREPAKRWSAMQLLQ------HPFILR 333 (353)
T ss_pred CCCCC---------ccCHHHHHHHHHHccCChhhCcCHHHHhc------Cccccc
Confidence 00011 11235789999999999999999999987 566543
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.4e-36 Score=337.44 Aligned_cols=264 Identities=24% Similarity=0.375 Sum_probs=197.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----ceeE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 655 (933)
+|++.+.||+|+||.||+|.. .+++.||||++...........++.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999954 5789999999875433344456789999999999999999999988643 2479
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+. ++|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELME-SDLHQVIKA-----NDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCC-CCHHHHHHh-----cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999995 689988854 2458999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCc--eeecccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--
Q 002346 736 NAPDGKY--SVETRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-- 809 (933)
Q Consensus 736 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-- 809 (933)
....... .......|++.|+|||++.+ ..++.++|||||||++|||++|+.||........... +......
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~---~~~~~~~~~ 228 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL---ITDLLGTPS 228 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH---HHHHhCCCC
Confidence 5432221 11234579999999999865 6789999999999999999999999976432211110 0000000
Q ss_pred --------cCCCC---cccCCCCC--CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 --------KENIP---KAIDPNLN--LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 --------~~~~~---~~~d~~l~--~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..... ..+..... ...........+.+++.+|++.+|++||+++|+++
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000 00000011235679999999999999999999986
No 79
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.4e-36 Score=322.89 Aligned_cols=255 Identities=28% Similarity=0.440 Sum_probs=205.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.+|++.+.||+|+||.||+|.. ..++.||+|++... .....++.+|+++++.++||||+++++++..+...++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 4577889999999999999955 45889999998754 2335678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ....+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 83 ~~~~~~L~~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 83 FMTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred eCCCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999998652 22458999999999999999999998 8999999999999999999999999999987655
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||++.+..++.++|||||||++|||++ |..||......+ . ...... . ......
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~---~~~~~~-~--~~~~~~ 227 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---V---YELLEK-G--YRMERP 227 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---H---HHHHHC-C--CCCCCC
Confidence 43332223345678999999988899999999999999999998 889987543221 1 111111 1 111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.. ....+.+++.+|++.+|++||++.+++++|+.+
T Consensus 228 ~~---------~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 EG---------CPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CC---------CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11 124577999999999999999999999998764
No 80
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9e-37 Score=312.81 Aligned_cols=270 Identities=24% Similarity=0.314 Sum_probs=204.5
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCc-ceeEEeEeeeCc-----
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH-LVALLGYCINGS----- 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 652 (933)
...|..+++||+|+||+||+|+ ..+|+.||+|+++.....+.......+|+.+++.++|+| ||++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456667889999999999994 457899999999877543333456789999999999999 999999998877
Q ss_pred -eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 653 -ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 653 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
..++||||++ -+|..++....... ..++...+..+++|+++|++|||+ ++|+||||||+|||++++|.+||+||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeecc
Confidence 7889999994 59999997643221 346668899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh-hc
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL-IS 809 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~ 809 (933)
|+|+...-... ..+..++|..|.|||++.+. .|+...||||+||++.||++++.-|.+..+.+. +...++..- ..
T Consensus 165 GlAra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q--l~~If~~lGtP~ 241 (323)
T KOG0594|consen 165 GLARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ--LFRIFRLLGTPN 241 (323)
T ss_pred chHHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH--HHHHHHHcCCCC
Confidence 99996553322 23445789999999999876 789999999999999999999998887654222 222222111 11
Q ss_pred cCCCCccc---C--CCCCCCh----hhHHH---HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPKAI---D--PNLNLDE----ETIES---IYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~---d--~~l~~~~----~~~~~---~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+..++... + ..+.... ..... .....+++.+|++.+|.+|.++..+++
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 12222221 1 1111000 00111 125678999999999999999999987
No 81
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=298.25 Aligned_cols=264 Identities=23% Similarity=0.339 Sum_probs=207.8
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----c
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----S 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 652 (933)
..++|++.+.||+|||+-||.+ ...+++.||+|++.... .+..+..++|++..++++||||+++++++..+ .
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 3578999999999999999999 46789999999998773 56678899999999999999999999987543 3
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..|++++|...|+|.+.+...... ...+++.+.+.|+.+|++||++||+. ..+++||||||.|||+.+.+.+++.|||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 489999999999999999875444 35799999999999999999999982 2359999999999999999999999999
Q ss_pred ccccCCCCCcee--------ecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 002346 733 LVKNAPDGKYSV--------ETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 733 la~~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~ 801 (933)
.+....-..... ...-..|..|.|||.+. +...++++|||||||++|+|+.|..||+.....
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~------- 247 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ------- 247 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-------
Confidence 887544211100 01124688999999884 345789999999999999999999999753221
Q ss_pred HHHHHhhccCCCCcc-cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 802 WFRRVLISKENIPKA-IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.+.+.-. ....+....... ..+.+.+++.+|++.||.+||++.+++..+..+
T Consensus 248 --------GgSlaLAv~n~q~s~P~~~~-yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 --------GGSLALAVQNAQISIPNSSR-YSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------CCeEEEeeeccccccCCCCC-ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111111 111111111111 446788999999999999999999999887654
No 82
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-36 Score=333.82 Aligned_cols=241 Identities=26% Similarity=0.441 Sum_probs=191.1
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|+++.... .....+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 4578999999976532 123345566677777654 899999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~ 151 (316)
T cd05592 81 GDLMFHIQS-----SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-G 151 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-C
Confidence 999999865 2458999999999999999999999 899999999999999999999999999997543322 2
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... . ...........+. .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~---~~~i~~~~~~~~~----~~-- 219 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---L---FDSILNDRPHFPR----WI-- 219 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHcCCCCCCC----CC--
Confidence 2334579999999999998899999999999999999999999997643221 1 1111111111111 11
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHA 855 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~ev 855 (933)
...+.+++.+|++.+|++||++.+.
T Consensus 220 -------~~~~~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 220 -------SKEAKDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred -------CHHHHHHHHHHccCCHHHcCCChHH
Confidence 1346789999999999999998643
No 83
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-36 Score=338.28 Aligned_cols=254 Identities=21% Similarity=0.304 Sum_probs=201.7
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.++|++.+.||+|+||.||++.. .+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 46899999999999999999955 4688999999875432 223345678999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++...
T Consensus 122 ~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 122 MEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999854 347888899999999999999999 89999999999999999999999999999865
Q ss_pred CCCCceeecccccccCcccccccCCC----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATG----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+.........+
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~ 266 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMDHKNSL 266 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------HHHHHHcCCCcC
Confidence 44332222345799999999988643 47899999999999999999999997643211 111222111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQ--RPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~--RPs~~evl~ 857 (933)
. ++... .....+.+++.+|++.+|++ ||++.++++
T Consensus 267 ~--~~~~~-------~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 T--FPDDI-------EISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred C--CCCcC-------CCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1 11100 11245679999999999988 999999976
No 84
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4e-36 Score=331.90 Aligned_cols=202 Identities=26% Similarity=0.401 Sum_probs=176.4
Q ss_pred hcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|++.+.||+|+||.||++... ++..+|+|.+.... .......+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 478999999999999999999654 68899999887652 3344577999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++.. ...+++..+..++.++++|++|||+ ..+|+||||||+||+++.++.+||+|||++....
T Consensus 83 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 83 EHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 99999999999965 2458899999999999999999997 2479999999999999999999999999987553
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTM 792 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~ 792 (933)
.. ......|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~ 206 (333)
T cd06650 156 DS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPD 206 (333)
T ss_pred hh---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcc
Confidence 32 1233578999999999998889999999999999999999999997543
No 85
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.6e-37 Score=352.02 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=208.0
Q ss_pred HHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc----
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS---- 652 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 652 (933)
...++|++.+.||+|+||.||+|. ..+|+.||||++.....+......+.+|+.++..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 345799999999999999999995 457999999999876656666778999999999999999999988765432
Q ss_pred ----eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 653 ----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 653 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
..++||||+++|+|.++++.... ....+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEE
Confidence 36799999999999999976332 23578999999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 729 ADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 729 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~~~~~~~ 258 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------EVMHKTL 258 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHh
Confidence 99999986543221 1223457999999999999989999999999999999999999999764321 1122222
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
... . ..+.+.+ ..++.+++.+||+.+|++||++.++++.
T Consensus 259 ~~~--~-~~~~~~~---------~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGR--Y-DPLPPSI---------SPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCC--C-CCCCCCC---------CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111 1 1111111 2357799999999999999999999863
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=344.48 Aligned_cols=259 Identities=26% Similarity=0.362 Sum_probs=208.5
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCC-cEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeE-eee------
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDG-TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGY-CIN------ 650 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------ 650 (933)
..++++.+.|.+|||+.||.|....+ ..||+|++... +....+...+|+++|++|+ |+|||.+++. ...
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 45678899999999999999977665 99999998876 5667889999999999996 9999999993 221
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
.-+++|.||||.||.|-+++..+.. ..|++.++++|+.++++|+++||. ++.+|||||||-+||||..++..||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCc
Confidence 2467899999999999999976332 339999999999999999999998 457899999999999999999999999
Q ss_pred ccccccCCCCCcee--------ecccccccCccccccc---CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHH
Q 002346 731 FGLVKNAPDGKYSV--------ETRLAGTFGYLAPEYA---ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHL 799 (933)
Q Consensus 731 fGla~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~ 799 (933)
||.|.......... .....-|+.|+|||++ .+...++|+|||+|||+||-|+....||+....-.
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---- 265 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---- 265 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----
Confidence 99886332221100 0113568999999977 56688999999999999999999999998753211
Q ss_pred HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 800 VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
++.....+|. ...+...|.+||+.||+.+|.+||++.||+..+-++...
T Consensus 266 ------Ilng~Y~~P~-----------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 266 ------ILNGNYSFPP-----------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ------EEeccccCCC-----------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1111222221 124556789999999999999999999999999887654
No 87
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-36 Score=341.62 Aligned_cols=253 Identities=22% Similarity=0.367 Sum_probs=197.6
Q ss_pred cCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++. ..+++.||||++..... .....+.+.+|++++++++||||+++++++.++...|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 478899999999999999995 45789999999875432 2334567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIK-----YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 99999999999865 2458899999999999999999999 899999999999999999999999999986322
Q ss_pred CCCc------------e----------------------------------eecccccccCcccccccCCCCCCCccchH
Q 002346 739 DGKY------------S----------------------------------VETRLAGTFGYLAPEYAATGRVTTKIDVY 772 (933)
Q Consensus 739 ~~~~------------~----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 772 (933)
.... . ......||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 1000 0 00124699999999999988999999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCC---
Q 002346 773 AFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQR--- 849 (933)
Q Consensus 773 SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~R--- 849 (933)
||||++|||++|+.||....+.+. +.........+. +.... .....+.+++.+|+. +|.+|
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~--~p~~~-------~~s~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENSHET------YRKIINWRETLY--FPDDI-------HLSVEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCHHHH------HHHHHccCCccC--CCCCC-------CCCHHHHHHHHHHhc-CHhhcCCC
Confidence 999999999999999976543221 111111111110 00000 011356789999997 66665
Q ss_pred CCHHHHHH
Q 002346 850 PDMGHAVN 857 (933)
Q Consensus 850 Ps~~evl~ 857 (933)
+++.|+++
T Consensus 297 ~~~~~~l~ 304 (377)
T cd05629 297 GGAHEIKS 304 (377)
T ss_pred CCHHHHhc
Confidence 58888876
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-36 Score=332.30 Aligned_cols=271 Identities=23% Similarity=0.343 Sum_probs=202.3
Q ss_pred hcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|++.+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++..+...++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 368999999999999999999654 789999999875532 223356788999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+. ++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 83 EYVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred ECCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 9995 6888887542 2458899999999999999999999 899999999999999999999999999987543
Q ss_pred CCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc--CCCCc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--ENIPK 815 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 815 (933)
... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....... .....+....... ...+.
T Consensus 155 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 155 VPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred CCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccc
Confidence 322 11233568999999998865 457899999999999999999999998643211 1111111111000 00000
Q ss_pred -----ccCCC-CC-CChhh----H---HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 816 -----AIDPN-LN-LDEET----I---ESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 816 -----~~d~~-l~-~~~~~----~---~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
.+++. .. ..... . .....+.+++.+|++.||++|||+.|+++ ++|..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~------h~~f~ 292 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS------HEYFS 292 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc------Ccccc
Confidence 00000 00 00000 0 01235679999999999999999999986 66664
No 89
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.7e-36 Score=333.45 Aligned_cols=264 Identities=27% Similarity=0.451 Sum_probs=205.9
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee-C
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-G 651 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~ 651 (933)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... .....+.+.+|+.++.++ +|+||++++++|.. +
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 35789999999999999999943 235789999987543 334456788999999999 89999999998865 4
Q ss_pred ceeEEEEeecCCCChhhHhhhcccC-------------------------------------------------------
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDH------------------------------------------------------- 676 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 676 (933)
...+++|||+++++|.+++......
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5678999999999999998642110
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee-ecccccccCc
Q 002346 677 -GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGY 754 (933)
Q Consensus 677 -~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y 754 (933)
...++++..+..++.||++||+|||+ .+|+||||||+||++++++.+||+|||+++......... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 01368999999999999999999998 899999999999999999999999999998654332222 2234567789
Q ss_pred ccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHH
Q 002346 755 LAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYR 833 (933)
Q Consensus 755 ~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 833 (933)
+|||++.+..++.++|||||||++|||++ |+.||......+. ... ... .. .....+. ....+
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~----~~~-~~-~~~~~~~---------~~~~~ 304 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCR----RLK-EG-TRMRAPE---------YATPE 304 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHH----HHh-cc-CCCCCCc---------cCCHH
Confidence 99999999999999999999999999998 9999976433221 111 111 11 1111111 11235
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 834 VAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 834 ~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
+.+++.+|++.+|++||++.|+++.|+.+++
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 7899999999999999999999999988764
No 90
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.9e-37 Score=338.32 Aligned_cols=240 Identities=26% Similarity=0.387 Sum_probs=196.2
Q ss_pred CccccCCCeEEEEEEe----CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 587 NILGRGGFGVVYGGEL----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.||+|+||.||++.. .+|+.||+|++............+..|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999854 368999999998754444445677889999999999999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+|+|.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 82 GGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 9999999854 2458999999999999999999999 8999999999999999999999999999886543321
Q ss_pred eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLN 822 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 822 (933)
......|++.|+|||++.+..++.++|||||||++|||++|+.||........ ..........++..+
T Consensus 154 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~------~~~i~~~~~~~p~~~----- 221 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET------MTMILKAKLGMPQFL----- 221 (318)
T ss_pred -ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH------HHHHHcCCCCCCCCC-----
Confidence 22345799999999999888899999999999999999999999976432211 111222122222211
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 823 LDEETIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 823 ~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
...+.+++.+|++.||++||++.+
T Consensus 222 --------~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 --------SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --------CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 134678999999999999999766
No 91
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.2e-36 Score=320.41 Aligned_cols=252 Identities=29% Similarity=0.452 Sum_probs=203.7
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
++|++.+.||+|+||.||+|+..++..||+|.+..... ..++|.+|+.++++++||||+++++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 46788899999999999999887777899999875432 236789999999999999999999999988889999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+.+|+|.+++... ...+++.+++.++.|++.|++|||+ .+++|+||||+||+++.++.+||+|||.++.....
T Consensus 81 ~~~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 81 MSNGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred CCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 9999999998652 1358999999999999999999998 89999999999999999999999999998866544
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.........++..|+|||+..+..++.++||||||+++|||++ |+.||......+ ... .... .... .. +
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~~~-~~~~--~~-~ 223 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---KVSQ-GLRL--YR-P 223 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HHhc-CCCC--CC-C
Confidence 3322223346678999999988889999999999999999999 999987543221 111 1111 1110 00 0
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.. ....+.+++.+||+.+|++||++.++++.++
T Consensus 224 ~~--------~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HL--------ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CC--------CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00 1246789999999999999999999998763
No 92
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=331.57 Aligned_cols=245 Identities=26% Similarity=0.432 Sum_probs=201.4
Q ss_pred CccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 583 FSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
|..++.||.|+||.||-| +..+.+.||||++..... +.+.+.++..|+..+.+++|||+|.+.|||..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 455677999999999999 456788999999987643 345678899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
| -|+-.+.+.-+ .+++.+.++..|..+.+.||+|||+ ++.||||||+.|||+++.|.|||+|||.|....+.
T Consensus 108 C-lGSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 108 C-LGSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred H-hccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 9 46777777542 2678999999999999999999999 89999999999999999999999999998766543
Q ss_pred CceeecccccccCccccccc---CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 741 KYSVETRLAGTFGYLAPEYA---ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..++|||.|||||++ ..+.|+-|+||||||+++.||..+++|......+.. ...+...+.
T Consensus 180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA------LYHIAQNes------ 242 (948)
T KOG0577|consen 180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNES------ 242 (948)
T ss_pred -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH------HHHHHhcCC------
Confidence 357999999999987 457899999999999999999999999876533221 111222111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
|.+. ..+....+..++..|+++-|.+|||.+++++
T Consensus 243 -PtLq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 243 -PTLQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -CCCC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 2222 2233456889999999999999999998654
No 93
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=351.00 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=202.4
Q ss_pred CCccCCccccCCCeEEEEEEe-CC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|.+.+.||+|+||.||+|.. .+ ++.||+|.+... .......+.+|+.+++.++|||||++++++..++..++|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 388899999999999999954 34 678888876544 23445678889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++..... ...++++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 146 ~~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred CCCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 9999999998865322 23568999999999999999999999 8999999999999999999999999999986654
Q ss_pred CCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+........ . .+.
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~------~~~~~~~~~~--~-~~~ 292 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE------IMQQVLYGKY--D-PFP 292 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCC--C-CCC
Confidence 321 12344579999999999998999999999999999999999999997543211 1222221111 0 011
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. ....+.+++.+|++.+|++||++.++++
T Consensus 293 ~~---------~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 293 CP---------VSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred cc---------CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11 1135779999999999999999999864
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-36 Score=334.16 Aligned_cols=244 Identities=25% Similarity=0.385 Sum_probs=196.5
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
+.||+|+||.||++.. .+|+.||+|++..... ......++..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 5789999999976532 2234567788999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++.. ...+++.++..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~ 152 (325)
T cd05594 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-T 152 (325)
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-c
Confidence 99998854 2468999999999999999999996 26999999999999999999999999999875432221 1
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........++..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~------~~~i~~~~~~~p~~~------- 219 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELILMEEIRFPRTL------- 219 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH------HHHHhcCCCCCCCCC-------
Confidence 2235799999999999988999999999999999999999999976433211 111111122222211
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...+.+++.+|++.||++|+ ++.++++
T Consensus 220 ------~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 220 ------SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ------CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 13467999999999999997 8888875
No 95
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.4e-36 Score=319.72 Aligned_cols=256 Identities=25% Similarity=0.446 Sum_probs=205.9
Q ss_pred cCCccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
++|++.+.||+|+||.||+|.+. +...||||.++... ......+|.+|+.++++++||||+++++++......++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 57889999999999999999764 24579999887553 34456789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||+++++|.+++... ...+++.+++.++.|++.|++|||+ ++|+||||||+||++++++.++|+|||+++.
T Consensus 83 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 83 ITEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999998652 1368999999999999999999998 8999999999999999999999999999987
Q ss_pred CCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 737 APDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 737 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
...... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+ ......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~----~~~~~~~ 228 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAV----EDGYRLP 228 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHH----HcCCCCC
Confidence 652221 11222345678999999998899999999999999999998 999986543221 11111 1111111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
. . ......+.+++.+|++.+|++||++.++++.|+++
T Consensus 229 ~--~---------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 P--P---------MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred C--C---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0 01124577999999999999999999999999765
No 96
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.8e-36 Score=324.61 Aligned_cols=258 Identities=31% Similarity=0.510 Sum_probs=206.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
++|.+.+.||+|+||.||+|... +++.||||.+.... ..+..++|.+|+++++.++|+||+++++++..+...
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 56888899999999999999653 35789999987653 233467899999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcc---------cCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 655 LLVYEYMPRGTLAQHLFEWH---------DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
++||||+++++|.+++.... ......+++.++..++.|++.|++|||+ ++++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCe
Confidence 99999999999999997532 1123458899999999999999999998 89999999999999999999
Q ss_pred EEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHH
Q 002346 726 AKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWF 803 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~ 803 (933)
+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~~ 237 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIECI 237 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH
Confidence 99999999875433222 12233456789999999999999999999999999999998 999987653322 11111
Q ss_pred HHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 804 RRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 804 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
. ...... ... .....+.+++.+||+.+|++||++.|+++.|+
T Consensus 238 ~-----~~~~~~-~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 238 T-----QGRLLQ-RPR---------TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H-----cCCcCC-CCC---------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 111111 111 11245789999999999999999999999875
No 97
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.6e-36 Score=324.14 Aligned_cols=260 Identities=26% Similarity=0.449 Sum_probs=204.9
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 652 (933)
.+++|++.+.||+|+||.||+|... .++.||+|++.... ......+|.+|+.+++.++||||+++++++..+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4678999999999999999998642 35679999886542 2344567899999999999999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEE
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~k 727 (933)
..++||||+++++|.+++...... ....+++..+..++.|+++|++|||+ .+++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEE
Confidence 999999999999999998653221 12346889999999999999999998 8999999999999999999999
Q ss_pred EecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHH
Q 002346 728 VADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 728 l~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~ 805 (933)
|+|||+++......... .....+++.|+|||++.++.++.++|||||||++|||++ |..||........ .. .
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~---~~---~ 233 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQV---LR---F 233 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH---H
Confidence 99999987654433221 122355788999999998889999999999999999999 6888875433211 11 1
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.. ...... ... .....+.+++.+|++.+|++||++.|+++.|+
T Consensus 234 ~~--~~~~~~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VM--EGGLLD-KPD---------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HH--cCCcCC-CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11 111111 001 11235789999999999999999999999875
No 98
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.5e-36 Score=336.75 Aligned_cols=205 Identities=24% Similarity=0.416 Sum_probs=176.8
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.++.+++|+||+++++++.++...++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4789999999999999999954 4689999999976432 2234467889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 99999999999965 2568999999999999999999998 899999999999999999999999999987543
Q ss_pred CCCc----------------------------------eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcC
Q 002346 739 DGKY----------------------------------SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITG 784 (933)
Q Consensus 739 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG 784 (933)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 2110 001235799999999999988999999999999999999999
Q ss_pred CCCCCCCCC
Q 002346 785 RKALDDTMP 793 (933)
Q Consensus 785 ~~p~~~~~~ 793 (933)
+.||....+
T Consensus 233 ~~Pf~~~~~ 241 (363)
T cd05628 233 YPPFCSETP 241 (363)
T ss_pred CCCCCCCCH
Confidence 999976543
No 99
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3e-36 Score=339.41 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=196.8
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.+|++.+.||+|+||.||+|+. .+++.||||++..... .......+.+|++++++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3689999999999999999954 5689999999875432 2234567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 81 DYIPGGDMMSLLIR-----LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 99999999999965 2458889999999999999999999 899999999999999999999999999975221
Q ss_pred CCC------------------------------------------ceeecccccccCcccccccCCCCCCCccchHhHHH
Q 002346 739 DGK------------------------------------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGV 776 (933)
Q Consensus 739 ~~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~ 776 (933)
... ........||+.|+|||++.+..++.++|||||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 000 00012347999999999999989999999999999
Q ss_pred HHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC---CHH
Q 002346 777 VLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP---DMG 853 (933)
Q Consensus 777 ~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP---s~~ 853 (933)
++|||++|+.||....+.+... .......... +..... ....+.+++.+|+ .+|.+|+ ++.
T Consensus 233 ilyell~G~~Pf~~~~~~~~~~------~i~~~~~~~~--~~~~~~-------~s~~~~~li~~l~-~~p~~R~~~~t~~ 296 (376)
T cd05598 233 ILYEMLVGQPPFLADTPAETQL------KVINWETTLH--IPSQAK-------LSREASDLILRLC-CGAEDRLGKNGAD 296 (376)
T ss_pred eeeehhhCCCCCCCCCHHHHHH------HHhccCcccc--CCCCCC-------CCHHHHHHHHHHh-cCHhhcCCCCCHH
Confidence 9999999999998754322211 1111011100 000000 1124567777765 5999999 788
Q ss_pred HHHH
Q 002346 854 HAVN 857 (933)
Q Consensus 854 evl~ 857 (933)
++++
T Consensus 297 ell~ 300 (376)
T cd05598 297 EIKA 300 (376)
T ss_pred HHhC
Confidence 8875
No 100
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.4e-36 Score=324.03 Aligned_cols=261 Identities=29% Similarity=0.490 Sum_probs=208.0
Q ss_pred cCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
++|.+.+.||+|+||.||++.. .++..+|+|.+... .....+.+.+|++++++++||||+++++++..+...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 5788999999999999999963 23456899988754 344567899999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhccc--------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcE
Q 002346 655 LLVYEYMPRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~ 726 (933)
++||||+++++|.+++..... .....+++.+++.++.|++.||+|||+ ++++||||||+||++++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcE
Confidence 999999999999999965321 112358999999999999999999998 899999999999999999999
Q ss_pred EEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHH
Q 002346 727 KVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 727 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~ 804 (933)
||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ..
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~---~~--- 233 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---IE--- 233 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH---
Confidence 9999999886543322 12223446788999999998889999999999999999998 8999876543221 11
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
.... ..... .... ....+.+++.+|++.+|.+||++.++.+.|+++..
T Consensus 234 ~i~~--~~~~~-~~~~---------~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 234 CITQ--GRVLQ-RPRT---------CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHc--CCcCC-CCCC---------CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1111 11111 0000 11357899999999999999999999999988753
No 101
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3e-36 Score=338.67 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=200.4
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-----eeE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-----ERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 655 (933)
+|++.+.||+|+||.||++.. .+++.||+|++..........+++.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999964 57999999998754333445578899999999999999999999998766 789
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+. ++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999996 688887744 2468999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHH------------
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTW------------ 802 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~------------ 802 (933)
..............+++.|+|||++.+. .++.++||||+||++|||++|+.||....+.+.......
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 6544332223345689999999998764 578999999999999999999999986544322111100
Q ss_pred ----HHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 803 ----FRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 803 ----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...........+........ .......++.+++.+|++.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYT---LSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcc---cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000000000000000000 00011245779999999999999999999986
No 102
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.8e-36 Score=322.06 Aligned_cols=256 Identities=29% Similarity=0.479 Sum_probs=208.5
Q ss_pred HhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
...+|++.+.||.|+||.||+|...+++.+|+|.+.... .....++.+|+.+++.++|+||+++++++......++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 346788999999999999999988789999999987653 334567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ....+++.++..++.|++.|++|||+ ++|+||||||+||++++++.+||+|||.+....
T Consensus 82 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 82 ELMEKGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred eecccCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 999999999999652 23568999999999999999999998 899999999999999999999999999998665
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..... .....++..|+|||++....++.++||||||+++|+|++ |+.||......+ ....+. . .... ..
T Consensus 156 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~~---~-~~~~--~~ 225 (261)
T cd05148 156 EDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQIT---A-GYRM--PC 225 (261)
T ss_pred Ccccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHH---h-CCcC--CC
Confidence 43322 223356778999999988889999999999999999998 889996543221 111111 1 1111 01
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.. .....+.+++.+|++.+|++||+++++++.|+.
T Consensus 226 ~~---------~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 PA---------KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CC---------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 11 112357799999999999999999999999875
No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.1e-36 Score=332.63 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=197.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+++.||+|++.+... .....+.+.+|+.++..++|+||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4789999999999999999965 4689999999875322 2334567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++... ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999642 2458899999999999999999999 899999999999999999999999999987654
Q ss_pred CCCceeecccccccCcccccccCC-----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAAT-----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
...........||+.|+|||++.. +.++.++||||+||++|||++|+.||......+ ............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~ 227 (331)
T cd05597 154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKEHF 227 (331)
T ss_pred CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH------HHHHHHcCCCcc
Confidence 433222233569999999999863 457889999999999999999999997643221 111221111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCC--CCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREP--QQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P--~~RPs~~evl~ 857 (933)
. +.+.. ......+.+++.+|+..++ ..||++.++++
T Consensus 228 ~--~~~~~------~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 Q--FPPDV------TDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred c--CCCcc------CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 0 11110 0112346678888775533 34789998876
No 104
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-36 Score=332.81 Aligned_cols=244 Identities=23% Similarity=0.383 Sum_probs=192.8
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||++.. .+++.||+|+++..... ....+.+.+|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999955 46889999999865332 23456788999999998 799999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~ 151 (329)
T cd05588 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-D 151 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCC-C
Confidence 999988854 2468999999999999999999998 899999999999999999999999999987432211 1
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch--hhHHHHHHHHHh-hccCCCCcccCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD--RAHLVTWFRRVL-ISKENIPKAIDPN 820 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~d~~ 820 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ ......+..... .....++..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---- 227 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS---- 227 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC----
Confidence 2234579999999999999999999999999999999999999997432111 111112222211 111112211
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
+ ...+.+++.+|++.||.+||++
T Consensus 228 ~---------~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 228 L---------SVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred C---------CHHHHHHHHHHhccCHHHcCCC
Confidence 1 1356799999999999999983
No 105
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=9.4e-36 Score=320.09 Aligned_cols=259 Identities=28% Similarity=0.441 Sum_probs=201.3
Q ss_pred CccCCccccCCCeEEEEEEeCC-Cc--EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------ce
Q 002346 583 FSEANILGRGGFGVVYGGELPD-GT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------SE 653 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 653 (933)
|.+.+.||+|+||.||+|...+ +. .||+|.++.........+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999997644 32 689999877654556678899999999999999999999987532 24
Q ss_pred eEEEEeecCCCChhhHhhhccc-CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
.++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999998753221 122458999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCCceee-cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKYSVE-TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
+++.......... ....+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .... . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~---~-~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYD---Y-LRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH---H-HHcC
Confidence 9986654332221 22346778999999998899999999999999999999 78888653321 1111 1 1111
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
...+ ..+. ....+.+++.+|++.+|++||++.++++.|+++
T Consensus 231 ~~~~--~~~~---------~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRLK--QPPD---------CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC--CCCC---------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 1111 123577999999999999999999999998764
No 106
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.4e-36 Score=332.66 Aligned_cols=240 Identities=26% Similarity=0.389 Sum_probs=190.3
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHH-HHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIA-VLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+|+.||+|++...... .....++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999965 47899999998764321 223345555554 56788999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++..+..++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~ 151 (323)
T cd05575 81 GELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-K 151 (323)
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-C
Confidence 999999865 2468899999999999999999998 899999999999999999999999999987543222 1
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...........+ .+.+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~~~~----~~~~-- 219 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MYDNILNKPLRL----KPNI-- 219 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HHHHHHcCCCCC----CCCC--
Confidence 2234579999999999999899999999999999999999999997643211 112222211111 1111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
...+.+++.+|++.+|++||++.+
T Consensus 220 -------~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 220 -------SVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred -------CHHHHHHHHHHhhcCHHhCCCCCC
Confidence 235679999999999999999863
No 107
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.8e-37 Score=324.64 Aligned_cols=250 Identities=33% Similarity=0.586 Sum_probs=194.2
Q ss_pred cCCccccCCCeEEEEEEeC-----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 585 EANILGRGGFGVVYGGELP-----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
..+.||.|.||.||+|.+. .+..|+||.+... ...+..+.|.+|++.+++++||||++++|++...+..++|||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccccccccccc
Confidence 4578999999999999775 3678999999653 344457899999999999999999999999998888999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++... ....+++.++..|+.|+++||+|||+ .+++|+||+++||++++++.+||+|||++.....
T Consensus 82 ~~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp --TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 99999999999773 23568999999999999999999999 8999999999999999999999999999987633
Q ss_pred CC-ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 740 GK-YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 740 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
.. ........+...|+|||.+....++.++||||||+++||+++ |+.||...... .... .... .... . .
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---~~~~---~~~~-~~~~-~-~ 226 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---EIIE---KLKQ-GQRL-P-I 226 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---HHHH---HHHT-TEET-T-S
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc---cccc-cccc-e-e
Confidence 22 222333457789999999988889999999999999999999 67888665322 1111 1111 1111 1 1
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.... ...+.+++..||+.+|++||++.++++.|
T Consensus 227 ~~~~---------~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 PDNC---------PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BTTS---------BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccch---------hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111 23577999999999999999999999875
No 108
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=316.16 Aligned_cols=260 Identities=27% Similarity=0.401 Sum_probs=195.4
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc---ee--E
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS---ER--L 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~--~ 655 (933)
.|+..+++|.|+||.||+|.. .+++.||||++-.+.. --.+|+++|+.++|||||+++.+|.... +. .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 466789999999999999965 4579999999866531 2247999999999999999999886532 22 4
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-CcEEEeccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVADFGLV 734 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfGla 734 (933)
+|||||+. +|.++++.+... ...++.-.+.-+.+|+.+||+|||+ .+|+||||||+|+|+|.+ |.+||||||.|
T Consensus 99 lVleymP~-tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 89999964 999999764333 2567778888899999999999999 999999999999999976 89999999999
Q ss_pred ccCCCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc--C
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--E 811 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 811 (933)
+....+... ..+.-|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+....+. ++..+ +++-.. +
T Consensus 174 K~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~eIi-k~lG~Pt~e 248 (364)
T KOG0658|consen 174 KVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVEII-KVLGTPTRE 248 (364)
T ss_pred eeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHHHH-HHhCCCCHH
Confidence 977765543 344568899999988664 799999999999999999999999987543222 22222 211000 0
Q ss_pred CC-------CcccCCCCCCCh----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NI-------PKAIDPNLNLDE----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~-------~~~~d~~l~~~~----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
++ .+.-.+.+.... .......+.++++.++++.+|.+|.++.|++.
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00 011111111111 12223456789999999999999999999886
No 109
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.9e-36 Score=324.34 Aligned_cols=261 Identities=29% Similarity=0.476 Sum_probs=208.4
Q ss_pred cCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
.+|.+.+.||+|+||.||+|.. .++..+++|.+... .....+.+.+|++++++++|+||+++++++..+...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 4678889999999999999963 23567899988654 334456799999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 655 LLVYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
++||||+++++|.+++..... .....+++..++.++.|++.|++|||+ ++|+||||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccC
Confidence 999999999999999965321 112358999999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.++|+|||++........ .......|+..|+|||++.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~ 236 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIE 236 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH
Confidence 9999999999976544322 22233457889999999998899999999999999999999 999987654322 111
Q ss_pred HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 802 WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
.. . ....... .. .....+.+++.+|++.+|++||++.+++++|+.+.+
T Consensus 237 ~~---~--~~~~~~~-~~---------~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 237 CI---T--QGRVLER-PR---------VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HH---h--CCCCCCC-Cc---------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11 1 1111111 00 112457899999999999999999999999988754
No 110
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.8e-36 Score=334.91 Aligned_cols=259 Identities=21% Similarity=0.280 Sum_probs=201.1
Q ss_pred HHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc
Q 002346 575 VLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (933)
Q Consensus 575 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 652 (933)
+++...++|++.+.||+|+||.||++.. .+++.||+|++..... .....+.+.+|+.+++.++||||+++++++..+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3444568999999999999999999965 4688999999865322 2233456789999999999999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999854 347888999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCCC----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAATG----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
+++..............||+.|+|||++... .++.++|||||||++|||++|+.||....... .+..+..
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~ 261 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMN 261 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 9986654332233456799999999998653 37899999999999999999999997643211 1122221
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQ--RPDMGHAVN 857 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~--RPs~~evl~ 857 (933)
....+.-...+ .....+.+++.+|++.++.+ ||++.++++
T Consensus 262 ~~~~~~~~~~~---------~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 262 HKNSLTFPDDN---------DISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred CCCcccCCCcC---------CCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 11111100001 11235678999999844433 778888876
No 111
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.7e-36 Score=319.41 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=209.4
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+++.||||.+..... ......++.+|+++++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5789999999999999999965 4789999998865332 3344567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++..... ....+++..+..++.|+++|++|||+ ++++||||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999998865322 23458899999999999999999998 899999999999999999999999999988654
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ..+..... ....+.
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~----~~~~~~~~--~~~~~~--- 227 (267)
T cd08228 158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----FSLCQKIE--QCDYPP--- 227 (267)
T ss_pred chhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH----HHHHHHHh--cCCCCC---
Confidence 4321 1123468899999999988889999999999999999999999986543211 11111111 111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.. .......+.+++.+||+.+|++||++.++++.++++
T Consensus 228 --~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 --LP----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --CC----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 10 112234578999999999999999999999998765
No 112
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.2e-36 Score=332.21 Aligned_cols=240 Identities=24% Similarity=0.372 Sum_probs=192.9
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||||++..... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 4688999999876432 233456778888888877 699999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-----~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~- 151 (320)
T cd05590 81 GDLMFHIQK-----SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK- 151 (320)
T ss_pred chHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-
Confidence 999998865 2458999999999999999999998 8999999999999999999999999999875432221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............+.. +
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~----~-- 219 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEAILNDEVVYPTW----L-- 219 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhcCCCCCCCC----C--
Confidence 2234579999999999998899999999999999999999999997653221 111222211111111 1
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
...+.+++.+|++.||++||++.+
T Consensus 220 -------~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 220 -------SQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred -------CHHHHHHHHHHcccCHHHCCCCCC
Confidence 135679999999999999999843
No 113
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7.8e-36 Score=318.58 Aligned_cols=255 Identities=31% Similarity=0.486 Sum_probs=204.3
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.++||+|+||.||+|...+...||+|+++.... ..++|.+|+++++.++||||+++++++. ....++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 357899999999999999999877777899999876432 2357899999999999999999999874 456789999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++... ....+++..+..++.|+++||+|+|+ .+|+||||||+||++++++.+||+|||.++....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 81 YMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred cCCCCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence 99999999999652 12457899999999999999999998 8999999999999999999999999999986654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||+..+..++.++||||||+++|||++ |+.||........ . .... .....+ ..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~---~~~~-~~~~~~--~~ 225 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---L---DQVE-RGYRMP--CP 225 (262)
T ss_pred cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---H---HHHh-cCCCCC--Cc
Confidence 43322233456778999999988899999999999999999999 7888865432211 1 1111 111110 11
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
......+.+++.+|++.+|++||+++++++.|+..
T Consensus 226 ---------~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 ---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ---------cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 12234578999999999999999999999998764
No 114
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-36 Score=326.48 Aligned_cols=260 Identities=24% Similarity=0.372 Sum_probs=214.4
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCcee
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSER 654 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 654 (933)
...+.|++.+.||+|.||.||++..+ +|+.+|+|.+.+..... .....+.+|+++|+++. |||||.+++++++....
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 34567889999999999999999654 59999999998775432 34578999999999998 99999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC----CcEEEec
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD----MRAKVAD 730 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~----~~~kl~D 730 (933)
++|||++.||.|.+.+... .+++..+..++.|++.|++|||+ .+|+|||+||+|+|+... +.+|++|
T Consensus 112 ~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred EEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEee
Confidence 9999999999999999763 28999999999999999999999 999999999999999643 5799999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
||++.....+ ......+||+.|+|||++....|+.++||||+||++|.|++|..||.......... .+....
T Consensus 183 FGla~~~~~~--~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------~i~~~~ 254 (382)
T KOG0032|consen 183 FGLAKFIKPG--ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------AILRGD 254 (382)
T ss_pred CCCceEccCC--ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH------HHHcCC
Confidence 9999988772 23456799999999999999999999999999999999999999998765432211 222222
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
..+..... ........+++..|+..||.+|+++.++++ ++|...
T Consensus 255 ~~f~~~~w---------~~is~~akd~i~~ll~~dp~~R~ta~~~L~------HpWi~~ 298 (382)
T KOG0032|consen 255 FDFTSEPW---------DDISESAKDFIRKLLEFDPRKRLTAAQALQ------HPWIKS 298 (382)
T ss_pred CCCCCCCc---------cccCHHHHHHHHHhcccCcccCCCHHHHhc------CccccC
Confidence 21111111 112345679999999999999999999998 677543
No 115
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.9e-36 Score=318.32 Aligned_cols=255 Identities=27% Similarity=0.462 Sum_probs=206.2
Q ss_pred HhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|+||+++++++. .+..++||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 3568899999999999999999888899999999876532 3467899999999999999999999864 45689999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ....+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++....
T Consensus 80 e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 80 EYMENGSLVDFLKTP---EGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred EcCCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 999999999998652 23468999999999999999999998 899999999999999999999999999987665
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
...........++..|+|||++....++.++||||||+++||+++ |+.||......+ ...... .....+ .
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~----~~~~~~--~ 224 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQNLE----RGYRMP--R 224 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHH----cCCCCC--C
Confidence 333323333456788999999998889999999999999999999 999997643221 111111 111110 1
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.. ....++.+++.+|++.+|++||+++++.+.|+.
T Consensus 225 ~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 PD---------NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CC---------CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11 112358899999999999999999999998864
No 116
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.2e-36 Score=324.80 Aligned_cols=249 Identities=25% Similarity=0.386 Sum_probs=195.9
Q ss_pred cccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||+||++.. .+++.||+|++...... ....+.+..|+++++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999954 47899999998765322 22346778899999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++..... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~ 155 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTK 155 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccc
Confidence 988854222 23568999999999999999999999 8999999999999999999999999999876554332 123
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... ............ .+.+
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~----~~~~------- 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRILNDSV----TYPD------- 222 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHhhcccCC----CCcc-------
Confidence 457899999999999999999999999999999999999999764322111 111111111110 1111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 827 TIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
.....+.+++.+|++.+|++|| +++++++
T Consensus 223 --~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 --KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred --cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 1224577999999999999999 5566654
No 117
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-35 Score=319.34 Aligned_cols=259 Identities=29% Similarity=0.454 Sum_probs=204.1
Q ss_pred CccCCccccCCCeEEEEEEeCC----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce-----
Q 002346 583 FSEANILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE----- 653 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 653 (933)
|.+.+.||+|+||.||+|.... +..||+|+++...........+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999996532 3679999998765555556789999999999999999999998876554
Q ss_pred -eEEEEeecCCCChhhHhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 654 -RLLVYEYMPRGTLAQHLFEWHDH-GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 654 -~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
.++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 68999999999999998653321 22468999999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 732 GLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 732 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
|+++......... .....++..|+|||++....++.++||||||+++|||++ |..||......+ ...+. ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~---~~- 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYL---RH- 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---Hc-
Confidence 9998654433221 122345678999999988889999999999999999999 888886543221 11111 11
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
... .. .. ......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 231 ~~~-~~-~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNR-LK-QP---------EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCC-CC-CC---------cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111 11 00 11224678999999999999999999999998765
No 118
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.7e-36 Score=323.07 Aligned_cols=261 Identities=26% Similarity=0.431 Sum_probs=205.7
Q ss_pred CCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 582 NFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
+|++.+.||+|+||.||+|... ....+|+|.+.... ......++.+|+.+++.++||||+++++++..++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4778899999999999999542 23578899887553 3344578999999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhccc-------------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCC
Q 002346 656 LVYEYMPRGTLAQHLFEWHD-------------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~ 716 (933)
+||||+.+++|.+++..... ....++++.+++.++.|++.||+|||+ .+|+||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhh
Confidence 99999999999999865321 112458899999999999999999998 89999999999
Q ss_pred cEEecCCCcEEEecccccccCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCc
Q 002346 717 NILIGDDMRAKVADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPD 794 (933)
Q Consensus 717 Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~ 794 (933)
||++++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||....+.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999998755332211 1222345678999999988889999999999999999999 99999764332
Q ss_pred hhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 795 DRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
. +..+... .... .... .....+.+++.+|++.+|++||+++++++.|++++.
T Consensus 237 ~---~~~~~~~----~~~~--~~~~---------~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 R---LFNLLKT----GYRM--ERPE---------NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred H---HHHHHhC----CCCC--CCCC---------CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 2 1111111 1000 0010 112357799999999999999999999999988764
No 119
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8e-36 Score=317.43 Aligned_cols=251 Identities=29% Similarity=0.450 Sum_probs=201.5
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
.+|++.+.||+|+||.||+|..+++..+|+|++..... ...+|.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 35788899999999999999887778899999865432 235788999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ...+++..++.++.|++.|++|||+ .+|+||||||+||++++++.+||+|||+++...+.
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 81 MANGCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred CCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 9999999998652 1358999999999999999999999 89999999999999999999999999998765443
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.........++..|+|||++.+..++.++||||||+++|||++ |+.||....+.+ ... .... ..... ...
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~~~~-~~~~~--~~~ 224 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVE---SVSA-GYRLY--RPK 224 (256)
T ss_pred cccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHH---HHHc-CCcCC--CCC
Confidence 2222222234568999999998899999999999999999999 788987543221 111 1111 10000 000
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
....++.+++.+|++.+|++||++.++++.|
T Consensus 225 ---------~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 225 ---------LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1224678999999999999999999999876
No 120
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.5e-36 Score=332.68 Aligned_cols=243 Identities=26% Similarity=0.402 Sum_probs=195.0
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCC-cceeEEeEeeeCceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHR-HLVALLGYCINGSERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 658 (933)
+|++.+.||+|+||.||+|... +++.||||++..... .....+.+..|.+++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999654 578999999976532 233456788899999999764 6888999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 81 EYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 99999999999865 2458899999999999999999999 899999999999999999999999999987533
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......||+.|+|||++.+..++.++||||+||++|||+||+.||....... . ...........+..+
T Consensus 153 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~---~~~i~~~~~~~~~~~- 224 (324)
T cd05587 153 FGGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---L---FQSIMEHNVSYPKSL- 224 (324)
T ss_pred CCCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHHHHcCCCCCCCCC-
Confidence 2221 1234579999999999999899999999999999999999999997653221 1 111111121122111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
..++.+++.+|++.+|.+|++.
T Consensus 225 ------------~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 225 ------------SKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------------CHHHHHHHHHHhhcCHHHcCCC
Confidence 1356799999999999999986
No 121
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.8e-36 Score=317.95 Aligned_cols=254 Identities=31% Similarity=0.501 Sum_probs=203.9
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.+.||+|+||.||+|...++..||+|.+..... ..+++.+|+.++++++|+|++++++++. ....++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 357889999999999999999888888999999876533 2357999999999999999999999875 456789999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.++++.. ....+++.++..++.|++.|++|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 81 YMSKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred ecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 99999999999652 23458999999999999999999999 8999999999999999999999999999986554
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. . ....+ ..
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~---~-~~~~~--~~ 225 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQVE---R-GYRMP--CP 225 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHH---c-CCCCC--CC
Confidence 33222223345678999999988889999999999999999999 88888654322 1111111 1 11110 00
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
......+.+++.+|++.+|++||+++++.+.|++
T Consensus 226 ---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 ---------QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---------CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112457899999999999999999999998864
No 122
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-36 Score=332.41 Aligned_cols=243 Identities=25% Similarity=0.363 Sum_probs=195.0
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|++..... .....+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999965 4578999999876532 233456678899998876 799999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|..++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 81 GDLMFQIQR-----SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 999998865 2458899999999999999999999 8999999999999999999999999999875433221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....+... ...........+.. +
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~------~~~i~~~~~~~p~~----~-- 219 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL------FESILHDDVLYPVW----L-- 219 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH------HHHHHcCCCCCCCC----C--
Confidence 22345799999999999988999999999999999999999999986543211 11222211111111 1
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRP-------DMGHAVN 857 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RP-------s~~evl~ 857 (933)
..++.+++.+|++.+|++|| ++.++++
T Consensus 220 -------~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 220 -------SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -------CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 13577999999999999999 6677664
No 123
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.9e-36 Score=332.46 Aligned_cols=244 Identities=24% Similarity=0.390 Sum_probs=192.0
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|+++..... ....+.+.+|+.++.++ +||||+++++++..+...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 46889999999865322 33456688899988877 799999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|..++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 999988854 2468999999999999999999999 8999999999999999999999999999875332211
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch--hhHHHHHHHH-HhhccCCCCcccCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD--RAHLVTWFRR-VLISKENIPKAIDPN 820 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~d~~ 820 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+... .......++. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~ 227 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----S 227 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC----C
Confidence 1234579999999999999999999999999999999999999996321111 1111122222 1211112221 1
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
+ ...+.+++.+|++.||++||++
T Consensus 228 ~---------~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 228 L---------SVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred C---------CHHHHHHHHHHhcCCHHHcCCC
Confidence 1 1356799999999999999984
No 124
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.5e-36 Score=325.37 Aligned_cols=253 Identities=26% Similarity=0.396 Sum_probs=201.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+|++.+.||+|+||.||++.. .+++.||||++....... .....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999965 468999999987643322 223567889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++... ....+++..+..++.|++.|++|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNM---GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999888542 22468999999999999999999999 8999999999999999999999999999886543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... .....|++.|+|||++.+..++.++||||+||++|||++|+.||......... ..+...... ....+.+
T Consensus 155 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~---~~~~~~~ 226 (285)
T cd05605 155 GET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKE---DQEEYSE 226 (285)
T ss_pred CCc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhh---cccccCc
Confidence 321 12347899999999999889999999999999999999999999864332111 111111110 0111111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
.....+.+++.+|++.||++|| +++++++
T Consensus 227 ---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 227 ---------KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ---------ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 1223567999999999999999 7778765
No 125
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=311.35 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=206.3
Q ss_pred cCCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+.|+.++.||+|.-|+||.+++.+ +..+|+|++.+.... .....+.+.|-+||+.++||.++.+|+.++.+...++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345667899999999999997754 588999999887654 455678899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|||+||+|...++++. ...+++..++-++.+|+-||+|||- .|||+||+||+||||.++|++.|+||.++....
T Consensus 157 eyCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred ecCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 9999999999997633 4669999999999999999999998 899999999999999999999999999865321
Q ss_pred C---------------------------------CCc----------------------eeecccccccCcccccccCCC
Q 002346 739 D---------------------------------GKY----------------------SVETRLAGTFGYLAPEYAATG 763 (933)
Q Consensus 739 ~---------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~ 763 (933)
. ... .....++||-.|.|||++.+.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 1 000 011235799999999999999
Q ss_pred CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHccc
Q 002346 764 RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTA 843 (933)
Q Consensus 764 ~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~ 843 (933)
..+.++|.|+|||++|||+.|..||.+..... .+. .++.....+++. ......+.+||+++|.
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~--Tl~----NIv~~~l~Fp~~-----------~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE--TLR----NIVGQPLKFPEE-----------PEVSSAAKDLIRKLLV 373 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchh--hHH----HHhcCCCcCCCC-----------CcchhHHHHHHHHHhc
Confidence 99999999999999999999999998764322 222 222222222211 1233467899999999
Q ss_pred CCCCCCCC----HHHHHH
Q 002346 844 REPQQRPD----MGHAVN 857 (933)
Q Consensus 844 ~~P~~RPs----~~evl~ 857 (933)
+||++|.. ++||.+
T Consensus 374 KdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred cChhhhhccccchHHhhc
Confidence 99999997 777765
No 126
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-35 Score=320.96 Aligned_cols=259 Identities=26% Similarity=0.487 Sum_probs=204.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-----CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
++|++.+.||+|+||.||+|.. .++..||+|.+.... ......+|.+|+.+++.++||||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4678889999999999999963 356789999987543 3344578999999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhccc------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 656 LVYEYMPRGTLAQHLFEWHD------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
+||||+++++|.+++..... .....+++.++..++.|++.||+|||+ ++|+||||||+||+++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCC
Confidence 99999999999999854211 012358899999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||....+.. ...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~~~ 237 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---VIE 237 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH
Confidence 9999999999986543321 22233456778999999988889999999999999999998 988987643221 111
Q ss_pred HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 802 WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
... .....+ .... ...++.+++.+|++.+|++||++.++.+.|..
T Consensus 238 ~~~----~~~~~~--~~~~---------~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVR----KRQLLP--CSED---------CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHH----cCCcCC--CCCC---------CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 111110 1111 12357789999999999999999999988753
No 127
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-35 Score=322.20 Aligned_cols=268 Identities=28% Similarity=0.455 Sum_probs=209.8
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 652 (933)
..++|++.+.||+|+||.||+|... .+..||+|.+.... ......++.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4678999999999999999998542 24589999886543 2334457889999999999999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhccc-----CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEE
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHD-----HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~k 727 (933)
..++||||+++|+|.+++..... .+....++..+..++.|++.||+|||+ ++|+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999975321 122456788899999999999999998 8999999999999999999999
Q ss_pred EecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHH
Q 002346 728 VADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 728 l~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~ 805 (933)
|+|||+++......... .....++..|+|||++.++.++.++|||||||++|||++ |..||......+ .. ..
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~---~~ 233 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VL---KF 233 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HH
Confidence 99999988554332211 122345778999999988899999999999999999998 788886543221 11 11
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
... . .... ... .....+.+++.+|++.+|++||++.++++.|++.+.++..
T Consensus 234 ~~~-~-~~~~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 234 VMD-G-GYLD-QPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred HHc-C-CCCC-CCC---------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 111 1 1111 000 1124678999999999999999999999999887766554
No 128
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=294.94 Aligned_cols=256 Identities=28% Similarity=0.422 Sum_probs=206.8
Q ss_pred HHHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCc------hhHHHHHHHHHHHHhc-CCCcceeEEeEe
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGN------KGLSEFQAEIAVLTKV-RHRHLVALLGYC 648 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 648 (933)
......|...+.||.|..++|-+. ..++|..+|+|++....... +-.+.-.+|+.+++++ .||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344567888899999999999887 45678999999987643221 1234456799999999 699999999999
Q ss_pred eeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 649 INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 649 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
+.+...++|+|.|+.|.|.++|.. ...+++++..+|++|+.+|++|||. +.|||||+||+|||+|++.++||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~i 164 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKI 164 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEE
Confidence 999999999999999999999965 3679999999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccC------CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHH
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAA------TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTW 802 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~ 802 (933)
+|||.++....+.. -...+|||+|.|||.+. ...|+...|+|++||++|.|+.|.+||..... .-.
T Consensus 165 sDFGFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ------mlM 236 (411)
T KOG0599|consen 165 SDFGFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ------MLM 236 (411)
T ss_pred eccceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH------HHH
Confidence 99999998887653 34579999999999884 34578899999999999999999999975311 111
Q ss_pred HHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 803 FRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 803 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.+..++..+. .++-.+......++|.+|++.||++|.|+.|+++
T Consensus 237 LR~ImeGkyqF~---------speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 237 LRMIMEGKYQFR---------SPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHhcccccC---------CcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 222232222211 1111233345779999999999999999999886
No 129
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.9e-36 Score=317.30 Aligned_cols=247 Identities=24% Similarity=0.363 Sum_probs=197.3
Q ss_pred ccccCCCeEEEEEEe---CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 588 ILGRGGFGVVYGGEL---PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
.||+|+||.||+|.+ .++..||+|++..........+++.+|+.+++.++||||+++++++. ++..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999954 35789999998766544555678999999999999999999999885 45678999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++.. ...+++..+..++.|++.|++|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 99999854 2458899999999999999999998 899999999999999999999999999998654433221
Q ss_pred --ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 745 --ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 745 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
.....++..|+|||.+....++.++||||||+++|||++ |+.||...... .....+. ....+. ..+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i~-----~~~~~~-~~~~- 222 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMIE-----SGERME-CPQR- 222 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH-----CCCCCC-CCCC-
Confidence 122244678999999988889999999999999999998 99999764332 1222111 111111 1111
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 822 NLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 822 ~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
....+.+++.+|++.+|++||++++|++.|++
T Consensus 223 --------~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 223 --------CPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --------CCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 12357799999999999999999999998865
No 130
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.9e-36 Score=331.25 Aligned_cols=245 Identities=23% Similarity=0.368 Sum_probs=193.7
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|+++..... ....+.+.+|+.++.++ +||+|+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 46789999999865332 23456788999999888 699999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|..++.. ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 151 (327)
T cd05617 81 GDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD- 151 (327)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-
Confidence 999988854 2468999999999999999999999 8999999999999999999999999999875322211
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh-hccCCCCcccCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL-ISKENIPKAIDPNLN 822 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~l~ 822 (933)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.............+..... .....++..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----- 226 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFL----- 226 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCC-----
Confidence 1234579999999999999999999999999999999999999997533221111112222221 1111222211
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002346 823 LDEETIESIYRVAELAGHCTAREPQQRPDMG 853 (933)
Q Consensus 823 ~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~ 853 (933)
...+.+++.+|++.||++||+++
T Consensus 227 --------~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 227 --------SVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred --------CHHHHHHHHHHhccCHHHcCCCC
Confidence 13467999999999999999864
No 131
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.2e-36 Score=338.06 Aligned_cols=204 Identities=26% Similarity=0.385 Sum_probs=174.6
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+|++++.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.++++++|||||++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999954 5688999999876432 23345678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++|+|.+++.+ ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 82 YIPGGDMMSLLIR-----MGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred CCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 9999999999865 2458899999999999999999999 8999999999999999999999999999753210
Q ss_pred CC----------------------------------------------ceeecccccccCcccccccCCCCCCCccchHh
Q 002346 740 GK----------------------------------------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYA 773 (933)
Q Consensus 740 ~~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S 773 (933)
.. ........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 00 00012346999999999999889999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC
Q 002346 774 FGVVLMETITGRKALDDTMP 793 (933)
Q Consensus 774 lG~~l~elltG~~p~~~~~~ 793 (933)
+||++|||++|+.||....+
T Consensus 234 lGvil~elltG~~Pf~~~~~ 253 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTP 253 (382)
T ss_pred chHHHHHHHhCCCCCCCCCH
Confidence 99999999999999986543
No 132
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-35 Score=326.66 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=202.9
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
.+|++.+.||+|+||.||+|.+. +++ .||+|+++... .....+++.+|+.+++.++||||++++|+|... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 46899999999999999999653 343 48999987542 344567899999999999999999999999764 567
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+|+||+++|+|.+++... ...+++..++.++.||++||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 85 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccc
Confidence 999999999999999652 2358899999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCceee-cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYSVE-TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.......... ....++..|+|||++....++.++||||||+++|||++ |+.||......+ ... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~ 230 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL 230 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHhCCCCC
Confidence 6654332221 22334678999999998999999999999999999998 999997643221 111 11111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
+. .+. ....+.+++.+|++.+|++||++.+++..+..+..
T Consensus 231 ~~--~~~---------~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 PQ--PPI---------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CC--CCC---------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 11 111 11356789999999999999999999999877653
No 133
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=308.91 Aligned_cols=247 Identities=26% Similarity=0.441 Sum_probs=207.9
Q ss_pred CccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|.++++||+|+||.|||| +...|..||+|++..+ ...+++..|+.+|++++.|++|++||.|......|+|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 556789999999999999 5568999999999765 34678899999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
..|+..+.++.. .+++++.++..+++..++||+|||. ..-||||||+.|||++.+|.+|++|||.|....+.-
T Consensus 111 GAGSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 111 GAGSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred CCCcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999998652 3789999999999999999999999 577999999999999999999999999998765532
Q ss_pred ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 742 YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
.....+.|||.|||||++..-.|..++||||+|++..||..|++||.+-.|+.... . ++.--.|.+
T Consensus 184 -AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---------M----IPT~PPPTF 249 (502)
T KOG0574|consen 184 -AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---------M----IPTKPPPTF 249 (502)
T ss_pred -HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---------e----ccCCCCCCC
Confidence 23445789999999999999999999999999999999999999998876643211 1 111112222
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 822 NLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 822 ~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .+.....++-++++.|+-+.|++|-|+.++++
T Consensus 250 ~---KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 250 K---KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred C---ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 2 22334457889999999999999999988765
No 134
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.2e-35 Score=315.53 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=202.5
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC---chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
++|.+.+.||+|++|.||++.. .+++.||+|.+...... ....+.+.+|++++++++||||+++++++..+...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5789999999999999999954 56899999998754322 2234678999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||+++++|.+++.. ...+++..+..++.|++.|++|||+ .+|+||||+|+||++++++.++|+|||+++.
T Consensus 82 v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 82 FMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred EEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 9999999999999865 2458899999999999999999999 8999999999999999999999999999875
Q ss_pred CCCCCceee--cccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 737 APDGKYSVE--TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 737 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
......... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||......... . .... .. ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~---~~~~-~~-~~ 225 (263)
T cd06625 154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI---F---KIAT-QP-TN 225 (263)
T ss_pred ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH---H---HHhc-cC-CC
Confidence 543221111 2346788999999999888999999999999999999999999764322111 1 1111 11 11
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+... ....+.+++.+|++.+|.+||++.++++
T Consensus 226 ~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 226 PQLPSH---------VSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCCcc---------CCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 111111 1235679999999999999999999986
No 135
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.9e-36 Score=327.64 Aligned_cols=242 Identities=26% Similarity=0.410 Sum_probs=192.2
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+|+.||+|+++..... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999965 46889999999765321 23345667788887765 899999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05620 81 GDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN- 151 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-
Confidence 999999865 2458899999999999999999999 8999999999999999999999999999875432221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..........+..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~---~~~~~~~~~~~~~~------ 219 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELF---ESIRVDTPHYPRWI------ 219 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCCCCCCCCC------
Confidence 223457999999999999999999999999999999999999999754321 111 11111111111111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMG-HAV 856 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~-evl 856 (933)
..++.+++.+|++.||++||++. ++.
T Consensus 220 -------~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 220 -------TKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -------CHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 13567899999999999999985 444
No 136
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-35 Score=332.57 Aligned_cols=263 Identities=26% Similarity=0.431 Sum_probs=205.9
Q ss_pred hcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCc
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGS 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 652 (933)
.++|.+.+.||+|+||.||+|.+. .++.||+|+++... .....+.+.+|+.++.++. |||||+++++|...+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 346778899999999999999753 34689999997653 2333467899999999997 999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhccc---------------------------------------------------------
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHD--------------------------------------------------------- 675 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 675 (933)
..++||||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999975321
Q ss_pred ------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEE
Q 002346 676 ------------------------------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (933)
Q Consensus 676 ------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nil 719 (933)
.....+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEE
Confidence 011347888899999999999999998 89999999999999
Q ss_pred ecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhh
Q 002346 720 IGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRA 797 (933)
Q Consensus 720 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~ 797 (933)
+++++.+||+|||+++....... .......+++.|+|||++....++.++||||||+++|||++ |+.||......+.
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~- 350 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ- 350 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-
Confidence 99999999999999986433221 11223457889999999988889999999999999999998 8889865432221
Q ss_pred HHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 798 HLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
.. ......... ..... ...++.+++.+||+.+|++||+++++++.|++++
T Consensus 351 -~~----~~~~~~~~~--~~p~~---------~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 -FY----NAIKRGYRM--AKPAH---------ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -HH----HHHHcCCCC--CCCCC---------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11 111111110 01111 1246789999999999999999999999998764
No 137
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.9e-35 Score=315.29 Aligned_cols=253 Identities=30% Similarity=0.473 Sum_probs=202.9
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
++|.+.+.||+|+||.||+|....+..||+|++.... ...+.+.+|+++++.++|+|++++++++. ....++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 5688899999999999999988777789999886543 23467899999999999999999999875 4567899999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.++++.. ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 82 MGKGSLLDFLKEG---DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred CCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 9999999999652 22458999999999999999999998 89999999999999999999999999999765443
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.........++..|+|||+..+..++.++||||||+++|||++ |+.||....+.+ ...++. .... .....
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~----~~~~--~~~~~ 226 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVE----RGYR--MPCPQ 226 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH----cCCC--CCCCc
Confidence 3222223456778999999988899999999999999999999 889987643221 111111 1111 01111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.....+.+++.+|++.+|++||+++++++.|++
T Consensus 227 ---------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 ---------GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---------ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 122467899999999999999999999998864
No 138
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.3e-36 Score=330.69 Aligned_cols=243 Identities=25% Similarity=0.375 Sum_probs=195.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+|.+.+.||+|+||.||+|.. .+++.||+|++.+... .....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 478899999999999999955 4678999999876532 223345677788888877 5899999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 81 EYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 99999999998855 2458899999999999999999998 899999999999999999999999999987543
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +. ..........+.
T Consensus 153 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~---~~i~~~~~~~p~--- 222 (323)
T cd05616 153 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF---QSIMEHNVAYPK--- 222 (323)
T ss_pred CCCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HH---HHHHhCCCCCCC---
Confidence 2221 2234579999999999999999999999999999999999999997653321 11 112211111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
.+ ..++.+++.+|++.+|++|++.
T Consensus 223 -~~---------s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 -SM---------SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -cC---------CHHHHHHHHHHcccCHHhcCCC
Confidence 11 2356799999999999999985
No 139
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-35 Score=320.98 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=203.1
Q ss_pred cCCccCCccccCCCeEEEEEEeCC---------------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD---------------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALL 645 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 645 (933)
++|++.+.||+|+||.||++.... ...||+|.++... .......|.+|++++++++|+||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 578999999999999999985532 2358999987542 344566899999999999999999999
Q ss_pred eEeeeCceeEEEEeecCCCChhhHhhhccc-------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcE
Q 002346 646 GYCINGSERLLVYEYMPRGTLAQHLFEWHD-------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718 (933)
Q Consensus 646 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Ni 718 (933)
+++......++||||+++++|.+++..... .....+++..++.++.|+++|++|||+ .+++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhE
Confidence 999999999999999999999999865211 111347899999999999999999998 8999999999999
Q ss_pred EecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc--CCCCCCCCCCch
Q 002346 719 LIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT--GRKALDDTMPDD 795 (933)
Q Consensus 719 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt--G~~p~~~~~~~~ 795 (933)
++++++.+||+|||++........ .......++..|+|||++..+.++.++|||||||++|||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 999999999999999876543322 22233456779999999988899999999999999999998 566776543322
Q ss_pred hhHHHHHHHHHhhccCC-CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 796 RAHLVTWFRRVLISKEN-IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 796 ~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
... ........... ......+. ....+.+++.+|++.+|++||++.+|++.|+
T Consensus 241 ~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIE---NTGEFFRNQGRQIYLSQTPL---------CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHH---HHHHhhhhccccccCCCCCC---------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111 11111110100 00001111 1236889999999999999999999999875
No 140
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3e-35 Score=311.90 Aligned_cols=248 Identities=29% Similarity=0.467 Sum_probs=199.4
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
++||+|+||.||+|...++..||+|++.... .......+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3699999999999988889999999887653 334455789999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++... ...+++.++..++.|++.|+.|+|+ ++++||||||+||+++.++.+||+|||++............
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 80 LSFLRKK----KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence 9998542 2357899999999999999999998 89999999999999999999999999998755433322222
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCCh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDE 825 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 825 (933)
...+++.|+|||++.++.++.++||||||+++||+++ |..||........ .. . ..... .......
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~---~~---~-~~~~~--~~~~~~~----- 218 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA---RE---Q-VEKGY--RMSCPQK----- 218 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH---HH---H-HHcCC--CCCCCCC-----
Confidence 2345678999999998899999999999999999998 9999975432211 11 1 11111 1011111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 826 ETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 826 ~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
....+.+++.+|++.+|++||++.++++.|.
T Consensus 219 ----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 ----CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1246789999999999999999999998764
No 141
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.9e-36 Score=331.33 Aligned_cols=243 Identities=25% Similarity=0.355 Sum_probs=191.5
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHH-HHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIA-VLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+|+.||+|++..... ......++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999954 5789999999876432 2233445566655 46778999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|..++.. ...+++.++..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~ 151 (325)
T cd05604 81 GELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-D 151 (325)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-C
Confidence 999988854 2568999999999999999999998 899999999999999999999999999987533221 1
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .......... .+.+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~~~~~----~~~~~~-- 219 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNILHKPL----VLRPGA-- 219 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHHcCCc----cCCCCC--
Confidence 2234579999999999999999999999999999999999999997643221 1122221111 111111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+.+++.+|++.+|++||++.+.++
T Consensus 220 -------~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 220 -------SLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred -------CHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 134668999999999999999875443
No 142
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.3e-35 Score=318.08 Aligned_cols=256 Identities=24% Similarity=0.416 Sum_probs=200.5
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
++|++.+.||+|+||.||+|.+. +++ .|++|.+.... ......++..|+..+++++||||+++++++. +...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence 46788899999999999999653 444 47778775432 2334567888999999999999999999875 45577
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+++||+++|+|.+++... ...+++..+..++.|+++|++|||+ ++++||||||+||++++++.+||+|||+++
T Consensus 85 ~i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred EEEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccce
Confidence 899999999999999652 2468999999999999999999998 899999999999999999999999999998
Q ss_pred cCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
........ ......++..|+|||++.++.++.++||||||+++||+++ |+.||....+... ... .. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~---~~~----~~-~~~~ 229 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV---PDL----LE-KGER 229 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHH----HH-CCCc
Confidence 65433221 1233457789999999998899999999999999999998 9999976543221 111 11 1111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
.. .+.. ....+.+++.+|+..+|++||++.|+++.|..+.
T Consensus 230 ~~--~~~~--------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 230 LA--QPQI--------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred CC--CCCC--------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 10 1111 1134678999999999999999999999987765
No 143
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-35 Score=328.42 Aligned_cols=256 Identities=19% Similarity=0.294 Sum_probs=198.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.++..++|++|+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4789999999999999999965 4688999999875321 2233456888999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999652 2458899999999999999999998 899999999999999999999999999998665
Q ss_pred CCCceeecccccccCcccccccCC-----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAAT-----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
...........|++.|+|||++.+ +.++.++|||||||++|||++|+.||......+ ............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~ 227 (331)
T cd05624 154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEERF 227 (331)
T ss_pred CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCcc
Confidence 433323334579999999998865 567889999999999999999999997643221 111222111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQ--RPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~--RPs~~evl~ 857 (933)
+ +++... +...++.+++.+|+..++++ |++++++++
T Consensus 228 ~--~p~~~~------~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 Q--FPSHIT------DVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred c--CCCccc------cCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0 111110 11245678899988865544 457777765
No 144
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.8e-35 Score=314.72 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=206.5
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+++.|++|.+..........+++.+|+++++.++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477889999999999999965 4689999999876655566678899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.... ...+++.+++.++.|++.|++|||+ .+++||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 81 AENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred CCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 99999999997621 2568999999999999999999998 89999999999999999999999999998865543
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
... .....|++.|+|||+..+..++.++||||||+++|||++|+.||...... ... ..... ...+. +..
T Consensus 155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~---~~~~~--~~~~~-~~~- 223 (256)
T cd08529 155 TNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALI---LKIIR--GVFPP-VSQ- 223 (256)
T ss_pred cch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHc--CCCCC-Ccc-
Confidence 221 23346889999999999888999999999999999999999999765321 111 11111 11111 110
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|++.+|++||++.++++
T Consensus 224 --------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 224 --------MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred --------ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 12245789999999999999999999986
No 145
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.1e-36 Score=319.82 Aligned_cols=254 Identities=28% Similarity=0.510 Sum_probs=203.1
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|++++.||+|+||.||++... +++.||+|++..............+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999654 5678999999887544444445567999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++++|.+++.. ...+++.+++.++.|+++||+|||+ .+|+|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~- 151 (260)
T PF00069_consen 81 PGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN- 151 (260)
T ss_dssp TTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTST-
T ss_pred ccccccccccc-----ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 99999999973 2568999999999999999999999 89999999999999999999999999998754221
Q ss_pred ceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 742 YSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
........+++.|+|||++. +..++.++||||+|+++|+|++|+.||......+................. ..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~----- 225 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS-QQ----- 225 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-TS-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-cc-----
Confidence 22334567899999999998 788999999999999999999999999875222222222111110000000 00
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+.+++.+|++.+|++||++.++++
T Consensus 226 ------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 ------SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ------cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000157889999999999999999999986
No 146
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-35 Score=322.71 Aligned_cols=263 Identities=29% Similarity=0.450 Sum_probs=208.4
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING 651 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 651 (933)
..++|++.+.||+|+||.||++... ....||+|.+.... ..+...++.+|+.++.++ +|+||+++++++..+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3467889999999999999999653 23689999987653 344456789999999999 899999999999999
Q ss_pred ceeEEEEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
+..++||||+++|+|.+++..... .....+++..++.++.|++.|++|||+ .+|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEE
Confidence 999999999999999999965321 223568999999999999999999998 899999999999999
Q ss_pred cCCCcEEEecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhH
Q 002346 721 GDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAH 798 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~ 798 (933)
+.++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||......+..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~- 244 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF- 244 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-
Confidence 999999999999998665433221 222345678999999988899999999999999999998 88998754322211
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
. ........ . ... .....+.+++.+|++.+|++||++.++++.|+.++
T Consensus 245 --~----~~~~~~~~-~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 --K----LLKEGYRM-E-KPQ---------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --H----HHHcCCcC-C-CCC---------CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 11111110 0 011 11235779999999999999999999999998764
No 147
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=325.95 Aligned_cols=243 Identities=25% Similarity=0.447 Sum_probs=197.6
Q ss_pred ccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 588 ILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
+||+|.||+||.|+. .+...+|||.++.. ..+..+-+..|+.+-++++|.|||+++|.+.+++..-+.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 699999999999955 45678899998765 344456788999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCC--CHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec-CCCcEEEecccccccCCCCCce
Q 002346 667 AQHLFEWHDHGYTPL--TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfGla~~~~~~~~~ 743 (933)
.+.|+.. -+++ .+.++-.+.+||++||.|||+ ..|||||||-+|||++ -.|.+||+|||-++....- ..
T Consensus 660 SsLLrsk----WGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP 731 (1226)
T KOG4279|consen 660 SSLLRSK----WGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NP 731 (1226)
T ss_pred HHHHHhc----cCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccC-Cc
Confidence 9999652 2456 788899999999999999999 8999999999999996 5788999999998865432 23
Q ss_pred eecccccccCcccccccCCC--CCCCccchHhHHHHHHHHHcCCCCCCCCCC-chhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 744 VETRLAGTFGYLAPEYAATG--RVTTKIDVYAFGVVLMETITGRKALDDTMP-DDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~~l~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.+..+.||..|||||++..+ .|+.++|||||||++.||.||++||..... ......+. +.+ +.|.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-----------myK-vHP~ 799 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-----------MYK-VHPP 799 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-----------cee-cCCC
Confidence 45567899999999999766 488999999999999999999999976432 22111111 001 1122
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+ +.+...+...+|.+|+.++|.+||++.++++
T Consensus 800 i-----Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 I-----PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred C-----cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 2 2233456779999999999999999999986
No 148
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=324.02 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=213.4
Q ss_pred cCCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.+....++||-|-||.||.|.|+. .-.||||.++.+ ....++|..|+.+|+.++|||+|+++|+|..+...|||+|
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 455677899999999999998754 567999999876 3456899999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||..|+|.+||++..+ ..++.-..+.+|.||+.|++||.. +.+||||+.++|+|+.++..|||+|||+++....
T Consensus 344 fM~yGNLLdYLRecnr---~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNR---SEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred cccCccHHHHHHHhch---hhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 9999999999977443 457778889999999999999998 8999999999999999999999999999999888
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
+.+.......-...|.|||-+....++.|+|||+|||+|||+.| |-.||.+-.-.... ..+.....+
T Consensus 418 DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-------~LLEkgyRM----- 485 (1157)
T KOG4278|consen 418 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-------GLLEKGYRM----- 485 (1157)
T ss_pred CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-------HHHhccccc-----
Confidence 87777666666789999999999999999999999999999999 66677654222211 112111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
...+. +...+.++++.||+..|.+||+++|+-+.++.+..
T Consensus 486 ---~~PeG---CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 486 ---DGPEG---CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ---cCCCC---CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 11111 22357789999999999999999999999987754
No 149
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.6e-35 Score=320.68 Aligned_cols=263 Identities=29% Similarity=0.441 Sum_probs=204.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCc--EEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 656 (933)
++|++.+.||+|+||.||+|... ++. .+++|.++... .....+.|.+|+.++.++ +||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 57889999999999999999664 333 47888876432 334456789999999999 79999999999999899999
Q ss_pred EEeecCCCChhhHhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 657 VYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
||||+++++|.++++..... ....+++..++.++.|++.|++|||+ ++|+||||||+||++++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCe
Confidence 99999999999999653211 11358899999999999999999998 89999999999999999999
Q ss_pred EEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHH
Q 002346 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~ 804 (933)
+||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |+.||......+. ..
T Consensus 158 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~------~~ 229 (297)
T cd05089 158 SKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL------YE 229 (297)
T ss_pred EEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH------HH
Confidence 999999998643221 11111223567999999988889999999999999999997 9999976543221 11
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcC
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWK 867 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 867 (933)
.... . ........ ....+.+++.+|++.+|.+||+++++++.|+.+...+.
T Consensus 230 ~~~~-~--~~~~~~~~---------~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 230 KLPQ-G--YRMEKPRN---------CDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHhc-C--CCCCCCCC---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1111 1 10001111 12357799999999999999999999999988876554
No 150
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.3e-35 Score=313.22 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=196.7
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 665 (933)
+.||+|+||.||+|.. .+++.||+|.+.... ..+....+.+|++++++++||||+++++++......++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 4699999999999965 478999999876542 34455789999999999999999999999999999999999999999
Q ss_pred hhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceee
Q 002346 666 LAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745 (933)
Q Consensus 666 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 745 (933)
|.+++... ...+++.+++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++...........
T Consensus 80 L~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 80 FLTFLRTE----GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 99998541 2458899999999999999999998 8999999999999999999999999999875443221111
Q ss_pred -cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 746 -TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 746 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
....++..|+|||.+.++.++.++||||||+++|||++ |..||........ .. ..... .+.....
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~---~~----~~~~~--~~~~~~~---- 219 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT---RE----AIEQG--VRLPCPE---- 219 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH---HH----HHHcC--CCCCCcc----
Confidence 11123457999999998899999999999999999998 8888865432211 11 11111 1111111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.....+.+++.+|++.+|++||++.++.++|+
T Consensus 220 -----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 -----LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11246789999999999999999999999875
No 151
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.6e-35 Score=348.88 Aligned_cols=265 Identities=23% Similarity=0.337 Sum_probs=205.7
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.++||+|+||.||+|.. .+|+.||+|++...... ....++|.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5799999999999999999955 46899999999764322 234567999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccC------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 659 EYMPRGTLAQHLFEWHDH------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
||+++|+|.+++...... .....++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998653211 12346778889999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCC-----------------ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch
Q 002346 733 LVKNAPDGK-----------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD 795 (933)
Q Consensus 733 la~~~~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~ 795 (933)
+++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998652110 001123579999999999999999999999999999999999999997632211
Q ss_pred hhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhhhh
Q 002346 796 RAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP-DMGHAVNVLGPLVE 864 (933)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-s~~evl~~L~~~~~ 864 (933)
.. . ...... +..+.+. .+....+.+++.+|++.||++|| +++++.+.|+..+.
T Consensus 239 i~----~-~~~i~~----P~~~~p~-------~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 IS----Y-RDVILS----PIEVAPY-------REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh----h-hhhccC----hhhcccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 0 000000 0000000 11223567899999999999996 66777777776654
No 152
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-35 Score=317.65 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=194.2
Q ss_pred CccccCCCeEEEEEEeCC---CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGELPD---GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|...+ +..+|+|.++... .......+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 358999999999996543 4579999887653 233445789999999999999999999999998899999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++...........++..+..++.|+++|++|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999976433233456788889999999999999998 89999999999999999999999999998754433322
Q ss_pred e-ecccccccCcccccccCCC-------CCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 744 V-ETRLAGTFGYLAPEYAATG-------RVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 744 ~-~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
. .....|+..|+|||++... .++.++||||||+++|||++ |+.||....+.+.. ... .. ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~---~~~--~~---~~~~ 228 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL---TYT--VR---EQQL 228 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH---HHH--hh---cccC
Confidence 2 2234678899999988542 35789999999999999996 99999765432211 110 00 1111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
...++.+.. .....+.+++..|+ .+|++||+++||++.|.
T Consensus 229 ~~~~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111122110 01124668889998 68999999999998764
No 153
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.7e-36 Score=322.67 Aligned_cols=269 Identities=26% Similarity=0.403 Sum_probs=201.8
Q ss_pred CC-ccCCccccCCCeEEEEEEe-----CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ce
Q 002346 582 NF-SEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SE 653 (933)
Q Consensus 582 ~~-~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 653 (933)
+| +..+.||+|+||+||++.. .++..||+|.+.... .......|.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 44 8889999999999987642 367899999987652 233456788999999999999999999988653 35
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++++|.+++.. ..+++.+++.++.|++.|++|||+ ++|+||||||+||++++++.+||+|||+
T Consensus 83 ~~lv~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred EEEEecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeeccc
Confidence 7899999999999999965 358999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCce--eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC
Q 002346 734 VKNAPDGKYS--VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE 811 (933)
Q Consensus 734 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 811 (933)
++........ ......++..|+|||.+....++.++||||||+++|||+||+.|+......-. ....+.... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~-~~~~ 231 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQ-MTVV 231 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccc-cchh
Confidence 8866543221 11223456679999999888899999999999999999999999865432110 000000000 0000
Q ss_pred CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 812 NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 812 ~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
.+.+.++.... .........++.+++.+|++.+|++||++++++++|+.+.
T Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMR-LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCC-CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00000000000 0001112346889999999999999999999999998763
No 154
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.5e-36 Score=327.41 Aligned_cols=243 Identities=26% Similarity=0.410 Sum_probs=195.0
Q ss_pred CccccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|... +++.||||+++.... .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999654 578999999986532 233456778899999888 699999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|..++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 151 (318)
T cd05570 81 GDLMFHIQR-----SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV- 151 (318)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-
Confidence 999998865 2468999999999999999999998 8999999999999999999999999999875322221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...........+. .+
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~---~~~i~~~~~~~~~----~~-- 219 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---EL---FQSILEDEVRYPR----WL-- 219 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HH---HHHHHcCCCCCCC----cC--
Confidence 123356899999999999999999999999999999999999999754321 11 1111111111111 11
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDM-----GHAVN 857 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~-----~evl~ 857 (933)
...+.+++.+||+.||.+||++ .++++
T Consensus 220 -------~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 220 -------SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -------CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1356799999999999999999 77764
No 155
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1e-35 Score=326.08 Aligned_cols=242 Identities=26% Similarity=0.424 Sum_probs=192.1
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||||+++.... .......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 4578999999876532 123345667788888765 899999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05619 81 GDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA- 151 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-
Confidence 999999865 2458899999999999999999998 8999999999999999999999999999875432221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ... .........+. .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~---~i~~~~~~~~~----~~-- 219 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQ---SIRMDNPCYPR----WL-- 219 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHH---HHHhCCCCCCc----cC--
Confidence 2234579999999999998899999999999999999999999997643221 111 11111111111 11
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMG-HAV 856 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~-evl 856 (933)
...+.+++.+|++.+|++||++. ++.
T Consensus 220 -------~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 220 -------TREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -------CHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 13467999999999999999997 543
No 156
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.7e-35 Score=320.53 Aligned_cols=265 Identities=25% Similarity=0.427 Sum_probs=203.3
Q ss_pred cCCccCCccccCCCeEEEEEEeC-----------------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCccee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-----------------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVA 643 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 643 (933)
++|++.+.||+|+||.||++... ++..||+|++.... ......+|.+|+.+++.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 57899999999999999998432 24468999987542 3344578999999999999999999
Q ss_pred EEeEeeeCceeEEEEeecCCCChhhHhhhcccC------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCc
Q 002346 644 LLGYCINGSERLLVYEYMPRGTLAQHLFEWHDH------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717 (933)
Q Consensus 644 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~N 717 (933)
+++++..++..++||||+++++|.+++...... ....+++.++..++.|++.|++|||+ .+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhe
Confidence 999999999999999999999999999763211 12357889999999999999999998 899999999999
Q ss_pred EEecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc--CCCCCCCCCCc
Q 002346 718 ILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT--GRKALDDTMPD 794 (933)
Q Consensus 718 ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt--G~~p~~~~~~~ 794 (933)
|+++.++.++|+|||+++....... .......+++.|+|||+...+.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999886543322 11223345678999999888889999999999999999998 77888654332
Q ss_pred hhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 795 DRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
+..... ..... ........ +... .....+.+++.+|++.+|++||++.++++.|+
T Consensus 241 ~~~~~~---~~~~~-~~~~~~~~-~~~~------~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QVIENT---GEFFR-DQGRQVYL-PKPA------LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHH---HHHHh-hccccccC-CCCC------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 221111 11110 00000000 0000 11246779999999999999999999999875
No 157
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.7e-36 Score=339.84 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=193.6
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------ 651 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 651 (933)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 356899999999999999999955 568999999886432 2345799999999999999999886432
Q ss_pred --ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEE
Q 002346 652 --SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKV 728 (933)
Q Consensus 652 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl 728 (933)
...++||||++ ++|.+++..... ....+++..++.++.|+++||+|||+ ++|+||||||+|||++.++ .+||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceee
Confidence 23568999996 578777754322 23568999999999999999999999 8999999999999999665 6999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|++||......+. +...+. ..
T Consensus 213 ~DFGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~~-~~ 287 (440)
T PTZ00036 213 CDFGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRIIQ-VL 287 (440)
T ss_pred eccccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHH-Hh
Confidence 99999986654322 234578999999998865 4689999999999999999999999976543222 111111 00
Q ss_pred hc---------cCCCCcccCCCCCCCh----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 IS---------KENIPKAIDPNLNLDE----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~---------~~~~~~~~d~~l~~~~----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. .....+.--+...... .+.....++.+++.+||+.+|.+||++.|+++
T Consensus 288 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 288 GTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 0000000000000000 00012246789999999999999999999985
No 158
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.6e-35 Score=315.70 Aligned_cols=262 Identities=22% Similarity=0.347 Sum_probs=209.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+++.||||.+..... ......++.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999964 5799999998875432 2334568899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++..... ....+++.+++.++.|+++|++|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999865222 23568999999999999999999998 899999999999999999999999999987654
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..... .....|+..|+|||++.+..++.++||||||+++|||++|..||....... ......... . ..
T Consensus 158 ~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~--~-----~~ 225 (267)
T cd08229 158 SKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YSLCKKIEQ--C-----DY 225 (267)
T ss_pred cCCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH----HHHhhhhhc--C-----CC
Confidence 33221 223468899999999988889999999999999999999999996532211 111111111 0 01
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
+... .......+.+++.+|++.+|++||||.+|+++++++
T Consensus 226 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111 011234678999999999999999999999998765
No 159
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=324.03 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=175.4
Q ss_pred CCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-C-----CcceeEEeEeeeCcee
Q 002346 582 NFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-H-----RHLVALLGYCINGSER 654 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~ 654 (933)
+|.+.+.||+|+||.|.|+ +.++++.||||+++.. .....+.+.|+.+|+.|+ | -|+|+++++|....+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 8999999999999999999 6677999999999865 344567788999999996 4 4999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC--CcEEEeccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD--MRAKVADFG 732 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~--~~~kl~DfG 732 (933)
|||+|.+ .-+|.++++.. .+..++...++.|+.||+.||..||+ .+|||+||||+||||.+. ..+||+|||
T Consensus 264 ciVfELL-~~NLYellK~n---~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 264 CIVFELL-STNLYELLKNN---KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred eeeehhh-hhhHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecc
Confidence 9999999 56999999763 34569999999999999999999998 899999999999999754 479999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD 795 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~ 795 (933)
.|......-+ .+.-+..|+|||++.+.+|+.+.|||||||+++||++|.+-|.+..+.+
T Consensus 337 SSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 337 SSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred cccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 9987765433 4566788999999999999999999999999999999988887665443
No 160
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.6e-35 Score=320.10 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=205.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCc
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 652 (933)
.++|.+.+.||+|+||.||++.. ..+..||||.++... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 35789999999999999999953 235579999887653 234456899999999999 7999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..++||||+.+|+|.++++... ...+++.++..++.|++.|++|||+ ++|+|+||||+||+++.++.++++|||
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999996522 2348999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
+++....... .......++..|+|||++.+..++.++||||+||++|||++ |+.||........ ... .....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~----~~~~~ 260 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYK----LIKEG 260 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHH----HHHcC
Confidence 9886544322 12223456788999999998899999999999999999998 9999876433211 111 11111
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
....... ....++.+++.+|++.+|++||++.|+++.|+++
T Consensus 261 --~~~~~~~---------~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 --YRMAQPE---------HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --CcCCCCC---------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1100000 1123578999999999999999999999998764
No 161
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.3e-35 Score=314.94 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=209.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|... +|+.||+|.++.... .....+++.+|++++++++|+||+++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999665 799999998875432 2334678999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++..... ....+++.+++.++.++++|++|||+ .+|+||||+|+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999865322 23568999999999999999999998 899999999999999999999999999987554
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......... ...+.
T Consensus 158 ~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~~~~--- 227 (267)
T cd08224 158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEK--CDYPP--- 227 (267)
T ss_pred CCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhhhhc--CCCCC---
Confidence 3221 122346889999999998888999999999999999999999998654311 1111111111 11111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.. .......+.+++.+|++.+|++||++.+++++|+++
T Consensus 228 --~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 228 --LP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --CC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00 012224577999999999999999999999999765
No 162
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.3e-35 Score=319.14 Aligned_cols=266 Identities=26% Similarity=0.422 Sum_probs=206.2
Q ss_pred hcCCccCCccccCCCeEEEEEEeCC-----------------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPD-----------------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLV 642 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 642 (933)
..+|++.+.||+|+||.||+|...+ +..||+|++.... .....+++.+|++++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3578999999999999999986532 3468999987653 334567899999999999999999
Q ss_pred eEEeEeeeCceeEEEEeecCCCChhhHhhhcccC------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCC
Q 002346 643 ALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDH------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716 (933)
Q Consensus 643 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~ 716 (933)
++++++..+...++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchh
Confidence 9999999999999999999999999999764321 12368999999999999999999998 89999999999
Q ss_pred cEEecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc--CCCCCCCCCC
Q 002346 717 NILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT--GRKALDDTMP 793 (933)
Q Consensus 717 Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt--G~~p~~~~~~ 793 (933)
||+++.++.++|+|||+++....... .......+++.|+|||++.++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999875543322 22334567789999999988889999999999999999998 6677765432
Q ss_pred chhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 794 DDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.. .......... ........+ . ......++.+++.+|++.+|++||++.|+++.|+
T Consensus 240 ~~---~~~~~~~~~~-~~~~~~~~~-~------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 QQ---VIENAGHFFR-DDGRQIYLP-R------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HH---HHHHHHhccc-cccccccCC-C------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 21 1111111110 001010000 0 0111246789999999999999999999999875
No 163
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-35 Score=330.11 Aligned_cols=266 Identities=24% Similarity=0.332 Sum_probs=199.1
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-----
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS----- 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 652 (933)
+.++|++.+.||+|+||.||++.. .+|+.||||++...........++.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999954 56899999999765444455677889999999999999999999986443
Q ss_pred -eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 653 -ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 653 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
..++||||+++ +|.+.++ ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecC
Confidence 46899999964 6766663 247889999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH-------------
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH------------- 798 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~------------- 798 (933)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...
T Consensus 168 g~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 168 GLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CCccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 9987543321 2234578999999999998899999999999999999999999997653211100
Q ss_pred ---HHHHHHHHhhccCCCC-----cccCCCC-CC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 799 ---LVTWFRRVLISKENIP-----KAIDPNL-NL-DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 799 ---~~~~~~~~~~~~~~~~-----~~~d~~l-~~-~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...............+ +.+.... .. ..........+.+++.+|++.||++||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000010000 0000000 00 0000111245779999999999999999999986
No 164
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.7e-35 Score=316.83 Aligned_cols=263 Identities=23% Similarity=0.422 Sum_probs=209.8
Q ss_pred hcCCccCCccccCCCeEEEEEEeCC-----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee-Cce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPD-----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 653 (933)
.++|++.+.||+|+||.||+|...+ +..||+|++... ........+.+|+.+++.++||||+++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 5788999999999999999997655 688999988644 244556788999999999999999999998876 467
Q ss_pred eEEEEeecCCCChhhHhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDH---GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
.++++||+++++|.+++...... ....+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence 88999999999999998663221 12468999999999999999999998 8999999999999999999999999
Q ss_pred ccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 731 FGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 731 fGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
||+++......... .....++..|+|||++....++.++||||||+++||+++ |+.||....+.+ +..+...
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~--- 234 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKD--- 234 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHc---
Confidence 99998654433222 222346778999999988889999999999999999999 999997643322 2221111
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
...... .. .....+.+++.+|++.+|++||++.++++.|+.+.+
T Consensus 235 -~~~~~~--~~---------~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 -GYRLAQ--PI---------NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -CCCCCC--CC---------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111111 00 112357899999999999999999999999988754
No 165
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-35 Score=319.33 Aligned_cols=259 Identities=22% Similarity=0.373 Sum_probs=202.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
.+|++.+.||+|+||.||+|... ++..||+|++.... .....+.+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 34677889999999999999653 35789999987553 233456789999999999999999999999999999
Q ss_pred EEEEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 655 LLVYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
++++||+.+++|.+++..... .....+++..+..++.|+++||+|+|+ ++|+||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCC
Confidence 999999999999999853210 112358899999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.+||+|||+++....... .......+++.|+|||++.++.++.++||||||+++|||++ |..||......+ .
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~-- 235 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---V-- 235 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---H--
Confidence 9999999999886543322 22233456789999999988889999999999999999998 888886543321 1
Q ss_pred HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 802 WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
........ .. .+.. +....+.+++.+|++.+|++||+++++++.|+.
T Consensus 236 -~~~i~~~~--~~-~~~~---------~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 -IEMIRNRQ--VL-PCPD---------DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHcCC--cC-CCCC---------CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111 10 0111 112347799999999999999999999998753
No 166
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.5e-35 Score=313.56 Aligned_cols=255 Identities=32% Similarity=0.519 Sum_probs=206.6
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.+.||+|+||.||+|...++..||||.+..... ..+++.+|+.++++++|+||+++++++......++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 578999999999999999999887888999999876532 34679999999999999999999999998889999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ....+++.++..++.+++.|++|||+ .+++|+||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~i~~~---~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 82 YMSKGSLLDFLKSG---EGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred ccCCCCHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999999652 22468999999999999999999998 8999999999999999999999999999886654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
..........++..|+|||.+.+..++.++||||+|+++||+++ |+.||....... ... .... . .....+
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~---~~~~-~--~~~~~~ 226 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLE---QVER-G--YRMPRP 226 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHc-C--CCCCCC
Confidence 32222222345678999999998889999999999999999999 999986543211 111 1111 1 010011
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.. ....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~~---------~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PN---------CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CC---------CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11 12357899999999999999999999998864
No 167
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-35 Score=321.77 Aligned_cols=264 Identities=30% Similarity=0.452 Sum_probs=206.7
Q ss_pred hcCCccCCccccCCCeEEEEEEeC--------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP--------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 650 (933)
.++|.+.+.||+|+||.||++... ++..||+|.+.... ......++.+|+.+++.+ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 357899999999999999999542 23579999987642 344456788999999999 79999999999999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEE
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nil 719 (933)
.+..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .+++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheE
Confidence 99999999999999999999763221 12358999999999999999999998 89999999999999
Q ss_pred ecCCCcEEEecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhh
Q 002346 720 IGDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRA 797 (933)
Q Consensus 720 l~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~ 797 (933)
++.++.+||+|||.++......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~-- 250 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 250 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--
Confidence 9999999999999987654322111 112234578999999988889999999999999999998 888886543211
Q ss_pred HHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 798 HLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
. ... .... ... .... .....+.+++.+|++.+|++||++.++++.|++++..
T Consensus 251 -~---~~~-~~~~-~~~-~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 251 -L---FKL-LKEG-HRM-DKPS---------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -H---HHH-HHcC-CCC-CCCC---------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 111 1111 110 0111 1124677899999999999999999999999887643
No 168
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-36 Score=315.09 Aligned_cols=259 Identities=22% Similarity=0.369 Sum_probs=215.3
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..-|...+.||+|.|++|-.|+ .-.|+.||||++.+...+......+.+|++.|+.++|||||++|++.......|||.
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 3456777889999999999883 458999999999998877777788999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec-CCCcEEEecccccccC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDMRAKVADFGLVKNA 737 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~-~~~~~kl~DfGla~~~ 737 (933)
|.=++|+|++|+..+ . ..+.+.-+.+++.||++|+.|+|. ..+||||+||+||.+- +-|-|||.|||++-.+
T Consensus 97 ELGD~GDl~DyImKH-e---~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKH-E---EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EecCCchHHHHHHhh-h---ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 999999999999763 2 348899999999999999999998 7999999999999775 5688999999999877
Q ss_pred CCCCceeecccccccCcccccccCCCCCC-CccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVT-TKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.++.. -+..+|+..|-|||++.+..|+ +++|||||||++|-|++|+.||+...+.+.. .+++..+..+|..
T Consensus 170 ~PG~k--L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL------TmImDCKYtvPsh 241 (864)
T KOG4717|consen 170 QPGKK--LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL------TMIMDCKYTVPSH 241 (864)
T ss_pred CCcch--hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh------hhhhcccccCchh
Confidence 77653 3456899999999999999885 6899999999999999999999876443221 1223323333322
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCCCcC
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPATRE 872 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~ 872 (933)
...++.++|..|+..||++|-+.+||+. ..|....++
T Consensus 242 -------------vS~eCrdLI~sMLvRdPkkRAslEeI~s------~~Wlq~~D~ 278 (864)
T KOG4717|consen 242 -------------VSKECRDLIQSMLVRDPKKRASLEEIVS------TSWLQAGDR 278 (864)
T ss_pred -------------hhHHHHHHHHHHHhcCchhhccHHHHhc------cccccCCCC
Confidence 2346789999999999999999999986 566554443
No 169
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-35 Score=320.65 Aligned_cols=263 Identities=27% Similarity=0.456 Sum_probs=207.4
Q ss_pred hcCCccCCccccCCCeEEEEEEe--------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL--------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 650 (933)
.++|.+.+.||+|+||.||+|.. .++..||+|.+.... .....+++.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 46788899999999999999953 134579999887542 344567899999999999 89999999999999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEE
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nil 719 (933)
....++||||+++|+|.+++...... ....+++.++..++.|+++||+|||+ ++|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEE
Confidence 99999999999999999999763221 12358899999999999999999998 89999999999999
Q ss_pred ecCCCcEEEecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhh
Q 002346 720 IGDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRA 797 (933)
Q Consensus 720 l~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~ 797 (933)
+++++.+||+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-- 247 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 247 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--
Confidence 9999999999999998665433222 222345678999999988889999999999999999998 778886543221
Q ss_pred HHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 798 HLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
+..... ..... .... .....+.+++.+|++.+|++||++.++++.|+++..
T Consensus 248 ----~~~~~~-~~~~~--~~~~---------~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 248 ----LFKLLK-EGHRM--DKPA---------NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ----HHHHHH-cCCcC--CCCC---------CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111111 11110 0000 122457789999999999999999999999987753
No 170
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.7e-35 Score=317.48 Aligned_cols=259 Identities=29% Similarity=0.490 Sum_probs=206.1
Q ss_pred hcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
.++|++.+.||+|+||.||+|... .+..||+|.+.... .......+.+|+.+++.++||||+++++++..+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 467889999999999999999653 24689999986543 23445678999999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
.++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEE
Confidence 99999999999999999753321 12357899999999999999999998 89999999999999999999999
Q ss_pred ecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHH
Q 002346 729 ADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRV 806 (933)
Q Consensus 729 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 806 (933)
+|||+++....... .......++..|+|||.+.++.++.++|||||||++||+++ |+.||....... ...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~-- 235 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFVI-- 235 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHHh--
Confidence 99999875543322 12233457789999999988889999999999999999998 889986543322 111111
Q ss_pred hhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 807 LISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 807 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
...... .... ....+.+++.+|++.+|++||++.++++.|+
T Consensus 236 ---~~~~~~-~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ---DGGHLD-LPEN---------CPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---cCCCCC-CCCC---------CCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111 1111 1246789999999999999999999999875
No 171
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.7e-35 Score=315.41 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=202.7
Q ss_pred hcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
+++|.+.+.||+|+||.||+|... .+..||+|.+.... .......|..|+.+++.++|+||+++++++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 467899999999999999999664 35688999876542 23345679999999999999999999999998889
Q ss_pred eEEEEeecCCCChhhHhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC---cEEE
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAKV 728 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl 728 (933)
.++||||+++++|.+++...... ....+++.++..++.||+.|++|||+ ++++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence 99999999999999999763221 12358999999999999999999999 8999999999999998765 5999
Q ss_pred ecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHH
Q 002346 729 ADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRV 806 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 806 (933)
+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||........ .. ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---~~---~~ 234 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---ME---FV 234 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH---HH
Confidence 9999998664322211 112234568999999988899999999999999999997 9999976443221 11 11
Q ss_pred hhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 807 LISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 807 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
. ..... ...... ...+.+++.+|++.+|++||++.++++.|+
T Consensus 235 ~-~~~~~--~~~~~~---------~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 T-GGGRL--DPPKGC---------PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred H-cCCcC--CCCCCC---------CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1 11111 011111 245779999999999999999999998774
No 172
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.6e-35 Score=313.22 Aligned_cols=255 Identities=26% Similarity=0.439 Sum_probs=205.8
Q ss_pred HhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..++|++.+.||+|+||.||+|...++..+|+|.+... ....+.|.+|+++++.++|+||+++++++.+ ...+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 35789999999999999999998877888999988754 2335688999999999999999999999877 7789999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ....+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.+....
T Consensus 80 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 80 EFMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred EeCCCCcHHHHHHhC---CccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 999999999999652 23458899999999999999999998 899999999999999999999999999987655
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
...........++..|+|||++..+.++.++|||||||++||+++ |+.||...... ....++ ......+ .
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~----~~~~~~~--~ 224 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRAL----ERGYRMP--R 224 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----hCCCCCC--C
Confidence 433332333456778999999988889999999999999999999 89998754321 111111 1111110 0
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.. .....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 225 ~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 PE---------NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cc---------cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01 112457799999999999999999999998864
No 173
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=8.6e-36 Score=328.60 Aligned_cols=244 Identities=24% Similarity=0.355 Sum_probs=190.6
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHH-HHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIA-VLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|++...... .....++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999965 46788999998764321 122334444544 56788999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~- 151 (325)
T cd05602 81 GELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG- 151 (325)
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-
Confidence 999999865 2457888999999999999999999 8999999999999999999999999999875432221
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... . .......... +.+.+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~---~~~i~~~~~~----~~~~~~- 220 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---M---YDNILNKPLQ----LKPNIT- 220 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---H---HHHHHhCCcC----CCCCCC-
Confidence 2234579999999999999999999999999999999999999997643221 1 1111111111 112221
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
..+.+++.+|++.+|.+||++.+.+..
T Consensus 221 --------~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 221 --------NSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred --------HHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 356799999999999999998765443
No 174
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.4e-35 Score=315.93 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=198.6
Q ss_pred cCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.++||+|+||.||+|. ..+++.||+|.+.... .....+++.+|+.++++++||||+++++++..+...++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 367888999999999999995 4578999999987542 34445679999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|..+. .+++..+..++.|++.|++|||+ .+|+|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 80 FMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred cCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence 99999996542 36788899999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH-HHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH-LVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 818 (933)
.. .....|+..|+|||++.+..++.++||||||+++|||++|+.||.......... .......... ...
T Consensus 148 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~----- 217 (279)
T cd06619 148 SI---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD--EDP----- 217 (279)
T ss_pred cc---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc--cCC-----
Confidence 22 233578999999999998899999999999999999999999997543221110 0111111110 000
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.+... ....++.+++.+|++.+|++||+++++++
T Consensus 218 ~~~~~~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 218 PVLPVG----QFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCCCCC----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111100 11235779999999999999999999986
No 175
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.9e-35 Score=321.08 Aligned_cols=261 Identities=29% Similarity=0.471 Sum_probs=202.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCc--EEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 656 (933)
++|++.+.||+|+||.||+|... ++. .+|+|.+.... ......++.+|+.++.++ +||||+++++++..++..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 57888999999999999999653 454 45777765432 344557889999999999 89999999999999999999
Q ss_pred EEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 657 VYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
||||+++++|.++++.... .....+++.+++.++.|+++|++|||+ ++|+||||||+||+++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCc
Confidence 9999999999999975321 112358999999999999999999998 89999999999999999999
Q ss_pred EEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHH
Q 002346 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~ 804 (933)
+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||......+. ..
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~ 234 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------YE 234 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH------HH
Confidence 9999999986432111 1112234678999999988889999999999999999998 9999975432211 11
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
.... ..... .. ......+.+++.+|++.+|++||+++++++.|+++.+.
T Consensus 235 ~~~~-~~~~~------~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 235 KLPQ-GYRLE------KP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHhc-CCcCC------CC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 10000 00 01123577999999999999999999999999877543
No 176
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.5e-35 Score=316.16 Aligned_cols=256 Identities=25% Similarity=0.373 Sum_probs=198.7
Q ss_pred cccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||.||++.. .+|+.||+|++....... .....+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999965 468999999987543322 2234566799999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++... ....+++..+..++.|++.|++|||+ .+|+||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~ 152 (277)
T cd05607 81 KYHIYNV---GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TIT 152 (277)
T ss_pred HHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eee
Confidence 9888542 23458899999999999999999998 899999999999999999999999999987665432 223
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...|++.|+|||++.+..++.++||||+||++|||++|+.||........ ........... .... ...
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~--~~~~-~~~------- 220 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTLED--EVKF-EHQ------- 220 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhhcc--cccc-ccc-------
Confidence 35789999999999888899999999999999999999999975432211 11111111111 1100 000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 827 TIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
....++.+++.+||+.+|++||+++|+++... .++|..
T Consensus 221 --~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~--~h~~f~ 258 (277)
T cd05607 221 --NFTEESKDICRLFLAKKPEDRLGSREKNDDPR--KHEFFK 258 (277)
T ss_pred --cCCHHHHHHHHHHhccCHhhCCCCccchhhhh--cChhhc
Confidence 11235779999999999999999988764332 255553
No 177
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.6e-35 Score=315.96 Aligned_cols=258 Identities=30% Similarity=0.465 Sum_probs=203.9
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
..+|...+.||+|+||.||++.. .++..+|+|.+... .......|.+|+++++.++|+||+++++++..+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 35678899999999999999953 24668999987754 34456789999999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhccc----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHD----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
.++||||+++++|.+++..... .....+++.+++.++.|++.|++|||+ .+|+||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCC
Confidence 9999999999999999975321 011358999999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+.. .
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~ 235 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI---E 235 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH---H
Confidence 9999999999875543322 11223345788999999998899999999999999999998 89998654332211 1
Q ss_pred HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 802 WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 802 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
...... .. ..+.. ....+.+++.+||+.+|++||++.++.+.|+
T Consensus 236 ---~~~~~~-~~--~~~~~---------~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 ---CITQGR-EL--ERPRT---------CPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---HHHcCc-cC--CCCCC---------CCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111110 00 01111 1135779999999999999999999999875
No 178
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.6e-35 Score=313.03 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=204.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
.+|++.+.||+|+||.||+|... .+..+|+|.++... .....+.|.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 57889999999999999999653 23479999987643 34456789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||+++++|.+++... ...+++.++..++.|++.|++|||+ .+++||||||+||+++.++.++++|||++..
T Consensus 83 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 83 VTEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999999652 2458999999999999999999998 8999999999999999999999999999986
Q ss_pred CCCCCceeec--ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 737 APDGKYSVET--RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 737 ~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.......... ...++..|+|||++.+..++.++||||||+++||+++ |+.||......+ ....+ ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~----~~~~~~ 228 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI----EEGYRL 228 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH----hCCCcC
Confidence 6543322221 1233568999999998889999999999999999887 999997653322 11111 111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
+.. ......+.+++.+|++.+|.+||++.++++.|+++
T Consensus 229 ~~~-----------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 PAP-----------MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCC-----------CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 110 01123567999999999999999999999998764
No 179
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.6e-35 Score=330.80 Aligned_cols=267 Identities=22% Similarity=0.319 Sum_probs=200.5
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING----- 651 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 651 (933)
.+.++|++.+.||+|+||.||++.. ..++.||||++...........++.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999954 4688999999976544455567888999999999999999999988643
Q ss_pred -ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 652 -SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 652 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
...++||||++ +++.+.+. ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEee
Confidence 35689999996 46777663 247889999999999999999998 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHH----------
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLV---------- 800 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~---------- 800 (933)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....
T Consensus 163 fg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 163 FGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred CcccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99998654322 223457899999999999889999999999999999999999999764322111000
Q ss_pred ------HHHHHHhhccCCC-----CcccCCC-CCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 801 ------TWFRRVLISKENI-----PKAIDPN-LNLD-EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 801 ------~~~~~~~~~~~~~-----~~~~d~~-l~~~-~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
............. +..+... .... .........+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 0000000000000 0000000 0000 001112345789999999999999999999987
No 180
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.3e-35 Score=337.95 Aligned_cols=275 Identities=21% Similarity=0.279 Sum_probs=199.3
Q ss_pred HHHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCC------CcceeEEe
Q 002346 574 EVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH------RHLVALLG 646 (933)
Q Consensus 574 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~ 646 (933)
+++....++|++.+.||+|+||.||+|.. ..++.||||+++.. ....+++..|+++++.++| ++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV---PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc---hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 34455678999999999999999999954 46889999998643 2223456778888777754 45889999
Q ss_pred EeeeC-ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-
Q 002346 647 YCING-SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM- 724 (933)
Q Consensus 647 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~- 724 (933)
++..+ .+.++|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+ +.+||||||||+|||++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~ 270 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDT 270 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCc
Confidence 88764 5788999988 7889988865 2468999999999999999999996 14999999999999998765
Q ss_pred ---------------cEEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCC
Q 002346 725 ---------------RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALD 789 (933)
Q Consensus 725 ---------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~ 789 (933)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 271 ~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 271 VVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred ccccccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 499999998764322 2234689999999999999999999999999999999999999998
Q ss_pred CCCCchhhHHHHHH---------HH--------HhhccCCCCcccCCC----C-C-CChhhHHHHHHHHHHHHHcccCCC
Q 002346 790 DTMPDDRAHLVTWF---------RR--------VLISKENIPKAIDPN----L-N-LDEETIESIYRVAELAGHCTAREP 846 (933)
Q Consensus 790 ~~~~~~~~~~~~~~---------~~--------~~~~~~~~~~~~d~~----l-~-~~~~~~~~~~~~~~li~~cl~~~P 846 (933)
.....+........ .. .......+....++. + . ...........+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 65432222111100 00 000000000000000 0 0 000000112356799999999999
Q ss_pred CCCCCHHHHHHHHhhhhhhcCCC
Q 002346 847 QQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 847 ~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
++||++.|+++ ++|...
T Consensus 427 ~~R~ta~e~L~------Hp~~~~ 443 (467)
T PTZ00284 427 QKRLNARQMTT------HPYVLK 443 (467)
T ss_pred hhCCCHHHHhc------Cccccc
Confidence 99999999986 666653
No 181
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-35 Score=326.17 Aligned_cols=244 Identities=26% Similarity=0.399 Sum_probs=195.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 658 (933)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999999954 5789999999876432 2234566788999988885 577888999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 81 EYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 99999999999855 2468999999999999999999998 899999999999999999999999999987543
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....+.. . ...........+..
T Consensus 153 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~---~~~i~~~~~~~p~~-- 223 (323)
T cd05615 153 VDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---L---FQSIMEHNVSYPKS-- 223 (323)
T ss_pred CCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHHHHhCCCCCCcc--
Confidence 3221 1234569999999999998899999999999999999999999997653321 1 11222212112211
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMG 853 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~ 853 (933)
+ ...+.+++.+|++.+|.+|++..
T Consensus 224 --~---------~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 224 --L---------SKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --C---------CHHHHHHHHHHcccCHhhCCCCC
Confidence 1 13567899999999999999854
No 182
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.2e-35 Score=317.78 Aligned_cols=260 Identities=30% Similarity=0.496 Sum_probs=205.3
Q ss_pred hcCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
.++|++.+.||+|+||.||+|... ++..||+|++.... ......+|.+|+.++++++||||+++++++..+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 467899999999999999999653 46789999987543 33445779999999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhccc-----------------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCC
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHD-----------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~ 716 (933)
.++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+ ++++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHh
Confidence 9999999999999999975321 112357899999999999999999998 89999999999
Q ss_pred cEEecCCCcEEEecccccccCCCCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCc
Q 002346 717 NILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPD 794 (933)
Q Consensus 717 Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~ 794 (933)
||++++++.++|+|||++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999875433221 11222345678999999988899999999999999999998 88888654322
Q ss_pred hhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 795 DRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
+ . ..... ...... ... ....++.+++.+|++.+|++||++.|+++.|++
T Consensus 240 ~---~---~~~~~--~~~~~~-~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 E---V---IYYVR--DGNVLS-CPD---------NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H---H---HHHHh--cCCCCC-CCC---------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1 1 11111 111111 011 112467899999999999999999999998863
No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.6e-35 Score=315.75 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=200.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++..+...++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 35799999999999999999964 578899999987542 233457889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.++++. ..++++.++..++.|+++|++|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 86 EYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 99999999999864 2468899999999999999999998 899999999999999999999999999988654
Q ss_pred CCCceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.... ......|++.|+|||.+. ...++.++|||||||++|||++|+.||....+...... .......
T Consensus 158 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~--------~~~~~~~- 227 (267)
T cd06646 158 ATIA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--------MSKSNFQ- 227 (267)
T ss_pred cccc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee--------eecCCCC-
Confidence 3221 122346889999999874 34578899999999999999999999865432211100 0001100
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.+... ........+.+++.+|++.+|++||+++++++.
T Consensus 228 --~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 228 --PPKLK---DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred --CCCCc---cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 01110 011123467899999999999999999999863
No 184
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.6e-35 Score=317.46 Aligned_cols=253 Identities=28% Similarity=0.429 Sum_probs=199.5
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|+..+.||+|+||.||+|.. .+++.||+|.+....... .....+.+|++++++++|+||+++.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 366778999999999999955 578999999987653322 223567889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... +...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 81 IMNGGDLKFHIYNM---GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred eccCccHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 99999999888542 22469999999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... .....|++.|+|||++.+..++.++|+||||+++|||++|+.||......... ..+.......... +.+
T Consensus 155 ~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~--~~~~~~~~~~~~~----~~~ 226 (285)
T cd05632 155 GES--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR--EEVDRRVLETEEV----YSA 226 (285)
T ss_pred CCc--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHhhhccccc----cCc
Confidence 221 13347899999999998889999999999999999999999999764332111 1111111111111 111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
.+ ...+.+++..|++.+|++||+ +.++++
T Consensus 227 ~~---------~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 227 KF---------SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cC---------CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 11 134678999999999999999 555554
No 185
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.2e-35 Score=325.98 Aligned_cols=266 Identities=23% Similarity=0.335 Sum_probs=198.9
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC---
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--- 651 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--- 651 (933)
...+.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 345678999999999999999999954 5788999999876543334456788999999999999999999987543
Q ss_pred ---ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 652 ---SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 652 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
...++++|++ +++|.+++.. ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEE
Confidence 3568999988 7899888743 458999999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. +..+....-
T Consensus 160 ~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 233 (343)
T cd07878 160 LDFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIMEVVG 233 (343)
T ss_pred cCCccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhC
Confidence 999999865432 234578999999999876 5688999999999999999999999975432111 111110000
Q ss_pred hccCCCCccc---------C--CCCCCCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKAI---------D--PNLNLDE---ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~~---------d--~~l~~~~---~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.........+ . +...... ........+.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 0 0000000 00001124679999999999999999999986
No 186
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-35 Score=328.67 Aligned_cols=266 Identities=22% Similarity=0.308 Sum_probs=199.8
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------ 651 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 651 (933)
+.++|++.+.||+|+||.||++.. ..++.||||++...........++.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999954 4688999999986544455567788999999999999999999987543
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
...++||||++ ++|.+++. ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH-------hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeC
Confidence 35799999996 57777773 247889999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH----------
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT---------- 801 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~---------- 801 (933)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.
T Consensus 171 G~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 171 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9998654322 2234578999999999999999999999999999999999999997654322111000
Q ss_pred ------HHHHHhhccCCCCcc----cCCCCCC---ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 802 ------WFRRVLISKENIPKA----IDPNLNL---DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 802 ------~~~~~~~~~~~~~~~----~d~~l~~---~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
............... ..+.... ..........+.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000 0000000 0001112245779999999999999999999987
No 187
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.5e-35 Score=326.03 Aligned_cols=264 Identities=27% Similarity=0.436 Sum_probs=203.5
Q ss_pred hcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC-
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING- 651 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 651 (933)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 36799999999999999999953 357899999997643 234456788999999999 689999999988654
Q ss_pred ceeEEEEeecCCCChhhHhhhcccC-------------------------------------------------------
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDH------------------------------------------------------- 676 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 676 (933)
...++||||+++|+|.++++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 4678999999999999998652110
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc-eeeccc
Q 002346 677 -------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY-SVETRL 748 (933)
Q Consensus 677 -------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~ 748 (933)
....+++..+..++.|+++||+|||+ ++|+||||||+||++++++.+||+|||++........ ......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 01247889999999999999999998 8999999999999999999999999999876533221 112223
Q ss_pred ccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhh
Q 002346 749 AGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEET 827 (933)
Q Consensus 749 ~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 827 (933)
.+++.|+|||++.+..++.++||||||+++|||++ |..||........ .. ......... . . +..
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~----~~~~~~~~~-~-~-~~~------ 306 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC----RRLKEGTRM-R-A-PDY------ 306 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HH----HHHhccCCC-C-C-CCC------
Confidence 45678999999988899999999999999999997 8889875432211 11 111111110 0 0 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 828 IESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 828 ~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
...++.+++.+|++.+|++||++.++++.|+.+++
T Consensus 307 --~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 --TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11357799999999999999999999999988754
No 188
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-35 Score=330.07 Aligned_cols=258 Identities=22% Similarity=0.383 Sum_probs=200.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.++.+++||+|+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688999999999999999955 4689999999975432 2334567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMK-----KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 99999999999865 2458999999999999999999998 899999999999999999999999999987442
Q ss_pred CCCc----------------------------------eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcC
Q 002346 739 DGKY----------------------------------SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITG 784 (933)
Q Consensus 739 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG 784 (933)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 2110 001234799999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHHhh
Q 002346 785 RKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD---MGHAVNVLGP 861 (933)
Q Consensus 785 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs---~~evl~~L~~ 861 (933)
+.||....+... ..........+ .+.+... ...++.+++.+++ .+|.+|++ +.++++
T Consensus 233 ~~Pf~~~~~~~~------~~~i~~~~~~~--~~p~~~~-------~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~---- 292 (360)
T cd05627 233 YPPFCSETPQET------YRKVMNWKETL--VFPPEVP-------ISEKAKDLILRFC-TDSENRIGSNGVEEIKS---- 292 (360)
T ss_pred CCCCCCCCHHHH------HHHHHcCCCce--ecCCCCC-------CCHHHHHHHHHhc-cChhhcCCCCCHHHHhc----
Confidence 999986544321 11111111111 1111111 1124567777766 49999996 455543
Q ss_pred hhhhcCC
Q 002346 862 LVEQWKP 868 (933)
Q Consensus 862 ~~~~~~~ 868 (933)
++|..
T Consensus 293 --hp~f~ 297 (360)
T cd05627 293 --HPFFE 297 (360)
T ss_pred --CCCCC
Confidence 56654
No 189
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=321.00 Aligned_cols=263 Identities=29% Similarity=0.436 Sum_probs=206.3
Q ss_pred cCCccCCccccCCCeEEEEEEeC--------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC
Q 002346 581 DNFSEANILGRGGFGVVYGGELP--------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING 651 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 651 (933)
.+|++.+.||+|+||.||+|... .+..||+|.+.... .....+++.+|+++++++ +||||+++++++..+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 46889999999999999999532 12368999887542 344567899999999999 799999999999999
Q ss_pred ceeEEEEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
+..++||||+++|+|.+++..... .....+++.++..++.|+++||+|||+ ++|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEE
Confidence 999999999999999999975321 112458899999999999999999998 899999999999999
Q ss_pred cCCCcEEEecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhH
Q 002346 721 GDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAH 798 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~ 798 (933)
+.++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--- 244 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--- 244 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---
Confidence 999999999999988654432211 122234568999999998899999999999999999998 888886543221
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
....... .. ... ... .....+.+++.+|++.+|++||++.|+++.|+.+...
T Consensus 245 ---~~~~~~~-~~-~~~-~~~---------~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 245 ---LFKLLKE-GH-RMD-KPA---------NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred ---HHHHHHc-CC-CCC-CCC---------CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 1111111 11 111 111 1123577999999999999999999999999887643
No 190
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.4e-35 Score=318.62 Aligned_cols=265 Identities=24% Similarity=0.334 Sum_probs=195.2
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc---CCCcceeEEeEeee-----Cc
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV---RHRHLVALLGYCIN-----GS 652 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 652 (933)
+|++.+.||+|+||.||+|.. .+++.||+|.++...........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 588899999999999999954 4789999999876533333334566777777665 69999999998864 34
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..++||||+. ++|.+++.... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccC
Confidence 5789999997 58988886522 2458999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh-ccC
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI-SKE 811 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 811 (933)
+++...... ......|++.|+|||++.+..++.++||||+||++|||++|++||......+. +......... ...
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~ 229 (288)
T cd07863 154 LARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPED 229 (288)
T ss_pred ccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHHHHHhCCCChh
Confidence 988654322 12345689999999999888999999999999999999999999975433221 1111111000 000
Q ss_pred CCCc-------ccCCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIPK-------AIDPNLNL--DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~~-------~~d~~l~~--~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.++. .+.+.... .........++.+++.+|++.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0110 00000000 0000112345679999999999999999999975
No 191
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.9e-35 Score=320.13 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=201.8
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||++.. .++..||+|.+.... ......++.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 4688999999999999999954 468889999887542 23345678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ...+++..+..++.|+++||+|||+ ..+++||||||+||+++.++.+||+|||++.....
T Consensus 80 y~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 80 HMDGGSLDQVLKK-----AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred ccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999965 2558899999999999999999997 25899999999999999999999999999875533
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC------
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI------ 813 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 813 (933)
.. .....|++.|+|||++.+..++.++||||||+++|||++|+.||........ ..+...........
T Consensus 153 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 153 SM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL---EAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred cc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH---HHhhcCccccccccCCcccc
Confidence 21 2345789999999999888899999999999999999999999965432211 11111100000000
Q ss_pred --------------------CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 --------------------PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 --------------------~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+.. .....++.+++.+|++.+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPS----GAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcC----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000000 012235789999999999999999999987
No 192
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-35 Score=348.04 Aligned_cols=259 Identities=20% Similarity=0.353 Sum_probs=201.8
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--Ccee
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSER 654 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 654 (933)
...++|.+++.||+|+||.||++.. ..+..||+|++............|..|+.++++++|||||++++++.. ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456899999999999999999955 467889999988765555667789999999999999999999998854 3568
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcc----CCCeEecCCCCCcEEecC--------
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA----QQSFIHRDLKPSNILIGD-------- 722 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~Dik~~Nill~~-------- 722 (933)
|+||||+++|+|.++|..... ....+++..++.|+.||+.||+|||+.. .++||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 999999999999999975322 2356999999999999999999999732 135999999999999964
Q ss_pred ---------CCcEEEecccccccCCCCCceeecccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCC
Q 002346 723 ---------DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDT 791 (933)
Q Consensus 723 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~ 791 (933)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 3358999999998654322 2234579999999998854 45889999999999999999999999754
Q ss_pred CCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 792 MPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... .+ +.. +.....++ ... ....+.++|..||+.+|.+||++.|++.
T Consensus 247 ~~~~--ql---i~~-lk~~p~lp--------i~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNFS--QL---ISE-LKRGPDLP--------IKG----KSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcHH--HH---HHH-HhcCCCCC--------cCC----CCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 3211 11 111 11111111 000 1235779999999999999999999984
No 193
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.2e-35 Score=315.04 Aligned_cols=253 Identities=24% Similarity=0.386 Sum_probs=199.2
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC----
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING---- 651 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~---- 651 (933)
.+++.|++.+.||+|+||.||+|.. .+++.||+|++.... ....++.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 3567888999999999999999965 468899999986542 3346788999999998 799999999998753
Q ss_pred --ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEe
Q 002346 652 --SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVA 729 (933)
Q Consensus 652 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~ 729 (933)
...++||||+++++|.+++... ....+++..+..++.|++.|++|||+ ++|+||||||+||++++++.++|+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEc
Confidence 4678999999999999998652 22468999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002346 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 730 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~ 804 (933)
|||++....... .......|++.|+|||++. ...++.++|||||||++|||++|+.||....+..... .
T Consensus 154 Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-----~ 227 (272)
T cd06637 154 DFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----L 227 (272)
T ss_pred cCCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----H
Confidence 999987654322 1223457899999999885 3457889999999999999999999997543221111 0
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. ....+...+.. ....+.+++.+|++.+|.+||++.++++
T Consensus 228 --~~-~~~~~~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 228 --IP-RNPAPRLKSKK---------WSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred --Hh-cCCCCCCCCCC---------cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 11111111111 1235779999999999999999999976
No 194
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.6e-35 Score=313.40 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=202.9
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
.++|++.+.||+|+||.||+|.+ .+++ .||+|++.... ......++.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 35788899999999999999964 3454 48999987543 344457889999999999999999999998754 56
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
+++|||+++|+|.++++.. ...+++.+++.++.|+++||+|||+ ++|+||||||+||++++++.+||+|||++
T Consensus 84 ~l~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 84 QLVTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred EEEEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCce
Confidence 7999999999999998652 2458999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
+......... .....+++.|+|||...+..++.++|||||||++|||++ |..||....... +..++.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~----~~~ 229 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEK----GER 229 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHC----CCc
Confidence 8665332221 112345678999999988899999999999999999998 889987543221 2222211 111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
.+. .+ .....+.+++.+|++.||++||++.++++.|+.+..
T Consensus 230 ~~~--~~---------~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 230 LPQ--PP---------ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCC--Cc---------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 110 11 112357799999999999999999999998877643
No 195
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8e-35 Score=312.09 Aligned_cols=258 Identities=25% Similarity=0.449 Sum_probs=204.8
Q ss_pred hcCCccCCccccCCCeEEEEEEeC-CC---cEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP-DG---TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.... .....+++..|++++++++||||+++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 356788899999999999999664 33 379999886542 3444678999999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+++++|.+++... ...+++.++..++.|++.|++|||+ .+++||||||+||++++++.+||+|||++.
T Consensus 83 lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 83 IITEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred EEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccce
Confidence 999999999999998651 2468999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCCceee--cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 736 NAPDGKYSVE--TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 736 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
.......... .....++.|+|||++....++.++|||||||++|||++ |+.||...... ... ..... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~---~~i~~-~~~ 228 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVM---KAIND-GFR 228 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHH---HHHhc-CCC
Confidence 6543322111 11223467999999988889999999999999999998 99999754322 111 11111 111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
.+.. .+...++.+++.+|++.+|++||++.++++.|++++
T Consensus 229 ~~~~-----------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 229 LPAP-----------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred CCCC-----------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 1111 012246789999999999999999999999998753
No 196
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.3e-35 Score=317.68 Aligned_cols=253 Identities=27% Similarity=0.426 Sum_probs=200.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|+..+.||+|+||.||++.. .+++.||||.+....... ...+.+..|+.++++++|++|+++++.+..++..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367788999999999999954 478999999987653322 223567889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... +...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 81 LMNGGDLKFHIYHM---GEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred ecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 99999999988542 22458999999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... .....|+..|+|||++.+..++.++||||+|+++|||++|+.||............... .. .....+..
T Consensus 155 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~---~~---~~~~~~~~ 226 (285)
T cd05630 155 GQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL---VK---EVQEEYSE 226 (285)
T ss_pred Ccc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh---hh---hhhhhcCc
Confidence 321 12347899999999999889999999999999999999999999864322111111100 00 00111111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
. ....+.+++.+|++.||++||+ +.|+++
T Consensus 227 ~---------~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 227 K---------FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred c---------CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1 1134679999999999999999 778775
No 197
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-35 Score=315.55 Aligned_cols=254 Identities=26% Similarity=0.395 Sum_probs=190.4
Q ss_pred ccccCCCeEEEEEEeCC---CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 588 ILGRGGFGVVYGGELPD---GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
.||+|+||.||+|...+ ...+|+|.+.... .......|.+|+..++.++||||+++++++......++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999996543 4578888776442 3344567889999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++...........++..+..++.|++.|++|||+ ++|+||||||+||++++++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976433323446788899999999999999999 899999999999999999999999999987543332211
Q ss_pred -ecccccccCcccccccCC-------CCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 745 -ETRLAGTFGYLAPEYAAT-------GRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 745 -~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.....+++.|+|||+... ..++.++|||||||++|||++ |..||....+.+. +.. ........++
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~---~~~~~~~~~~- 231 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LKQ---VVREQDIKLP- 231 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HHH---HhhccCccCC-
Confidence 233456778999998642 356889999999999999999 7788865432211 111 0111111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
++.+. ......+.+++..|+ .||++||++++|++.|
T Consensus 232 --~~~~~-----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 232 --KPQLD-----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred --CCccc-----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11111 112234567888888 5999999999999876
No 198
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-35 Score=316.75 Aligned_cols=249 Identities=23% Similarity=0.399 Sum_probs=201.9
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 5788899999999999999954 578999999987653 2334678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ..+++.++..++.|++.|++|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 98 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999854 357899999999999999999998 8999999999999999999999999999875443
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|++.|+|||++.+..++.++|||||||++|||++|+.||....+... . ... .. ...+..-.
T Consensus 169 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~---~~~-~~--~~~~~~~~- 238 (296)
T cd06654 169 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--L---YLI-AT--NGTPELQN- 238 (296)
T ss_pred ccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--H---HHH-hc--CCCCCCCC-
Confidence 221 12234688999999999888899999999999999999999999976543211 1 111 10 01111000
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+.+++.+|+..+|++||++.++++
T Consensus 239 -------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 -------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -------ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 0112245778999999999999999999987
No 199
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-34 Score=308.37 Aligned_cols=248 Identities=21% Similarity=0.369 Sum_probs=194.9
Q ss_pred ccccCCCeEEEEEEeC---CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 588 ILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
.||+|+||.||+|.+. .+..||+|++.... .....++|.+|+.++++++||||+++++++. ....++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999653 35579999887552 3344567999999999999999999999885 45678999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++... ...+++.+++.++.|+++|++|||+ ++++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 80 PLNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999998641 2468999999999999999999998 899999999999999999999999999987554432211
Q ss_pred e--cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 745 E--TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 745 ~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
. ....+++.|+|||++....++.++||||||+++||+++ |+.||......+. ...+ .. . . +...++.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~---~~-~-~-~~~~~~~- 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV---MSFI---EQ-G-K-RLDCPAE- 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHH---HC-C-C-CCCCCCC-
Confidence 1 12233578999999988889999999999999999996 9999976533221 1111 11 1 1 1111111
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 822 NLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 822 ~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
...++.+++.+||+.+|++||++.++.+.|+..
T Consensus 223 --------~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 --------CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 124677999999999999999999999988754
No 200
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-35 Score=322.93 Aligned_cols=256 Identities=20% Similarity=0.303 Sum_probs=197.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++... +++.||+|++.+... .......+..|+.++..++|++|+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999654 578899999865322 2233456888999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++|+|.+++.+. ...+++..+..++.|++.|++|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 81 ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 999999999999652 2458999999999999999999999 899999999999999999999999999987654
Q ss_pred CCCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||....... ............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~ 227 (332)
T cd05623 154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERF 227 (332)
T ss_pred cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCCccc
Confidence 33333333457999999999885 3467899999999999999999999997643221 122222111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQ--RPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~--RPs~~evl~ 857 (933)
. +.... ......+.+++.+|+..++.+ |+++.++++
T Consensus 228 ~--~p~~~------~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 228 Q--FPAQV------TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred c--CCCcc------ccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 0 11100 111235668888888654444 688988876
No 201
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9.8e-35 Score=309.17 Aligned_cols=251 Identities=29% Similarity=0.511 Sum_probs=202.7
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
.+|++.+.||+|+||.||+|...+++.+|+|++..... ...+|.+|++++++++|||++++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 46788899999999999999877788999999875533 235789999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ...+++..++.++.|++.|++|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 81 MEHGCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred CCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999998642 2457899999999999999999998 89999999999999999999999999998765443
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.........++.+|+|||++.++.++.++||||||+++|||++ |+.||....... ... .... .. ....+
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~---~~~~-~~---~~~~~ 223 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVE---TINA-GF---RLYKP 223 (256)
T ss_pred cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHH---HHhC-CC---CCCCC
Confidence 3222223345678999999988889999999999999999998 999987543211 111 1111 00 11111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
... ..++.+++.+|++.+|++||++.++++.|
T Consensus 224 ~~~--------~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 RLA--------SQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCC--------CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 111 24578999999999999999999999876
No 202
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.3e-34 Score=308.34 Aligned_cols=248 Identities=27% Similarity=0.466 Sum_probs=196.7
Q ss_pred CccccCCCeEEEEEEeCC----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 587 NILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.||+|+||.||+|.... +..||+|.+...... ...+++.+|+++++.++|+||+++++++. ....++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 469999999999995422 268999998866433 45578999999999999999999999876 456799999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+++|.+++... ..+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 79 LGPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999999652 368999999999999999999998 8999999999999999999999999999886544332
Q ss_pred eeec--ccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 743 SVET--RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 743 ~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ....++.. ....+ ...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~~----~~~~~--~~~ 221 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLES----GERLP--RPE 221 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHc----CCcCC--CCC
Confidence 2111 1223568999999988899999999999999999998 99999764322 22222211 11110 000
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.....+.+++.+|++.+|++||++.++++.|+++
T Consensus 222 ---------~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 222 ---------ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1123577999999999999999999999999765
No 203
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-34 Score=318.35 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=205.4
Q ss_pred cCCccCCccccCCCeEEEEEEeC--------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC
Q 002346 581 DNFSEANILGRGGFGVVYGGELP--------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING 651 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 651 (933)
++|.+.+.||+|+||.||+|... ....||+|.+.... ......++..|+.+++++ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 57888999999999999999531 24578999887543 344567889999999999 699999999999988
Q ss_pred ceeEEEEeecCCCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
...++||||+++|+|.+++..... .....+++.++..++.|++.||+|||+ ++|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence 899999999999999999976321 112458999999999999999999998 899999999999999
Q ss_pred cCCCcEEEecccccccCCCCCcee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhH
Q 002346 721 GDDMRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAH 798 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~ 798 (933)
+.++.+||+|||+++......... .....++..|+|||++.++.++.++||||||+++|||++ |+.||......+
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--- 244 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE--- 244 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 999999999999998654322211 112234568999999988889999999999999999999 888886543222
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
..... . ...... ... .....+.+++.+|++.+|++||++.++++.|+++..
T Consensus 245 ~~~~~----~-~~~~~~-~~~---------~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 245 LFKLL----R-EGHRMD-KPS---------NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHH----H-cCCCCC-CCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11111 1 111111 111 112357789999999999999999999999988754
No 204
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.5e-35 Score=322.86 Aligned_cols=266 Identities=22% Similarity=0.348 Sum_probs=198.8
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|.+.+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 5788999999999999999965 4688999999876532 2334567889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++ ++|.+++... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 85 YLD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred CCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 997 4888887542 2457899999999999999999998 8999999999999999999999999999875433
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc--
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA-- 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 816 (933)
... ......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+............. ...++..
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (309)
T cd07872 157 PTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPT-EETWPGISS 234 (309)
T ss_pred Ccc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC-HHHHhhhcc
Confidence 221 1223467899999998864 4688999999999999999999999976544322211110000000 0000000
Q ss_pred ----cC---CCCCCC---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 ----ID---PNLNLD---EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ----~d---~~l~~~---~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+ +..... ........++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 000000 000011235679999999999999999999986
No 205
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.8e-35 Score=315.27 Aligned_cols=267 Identities=24% Similarity=0.335 Sum_probs=200.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 478889999999999999965 4689999999876544444456788999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
++ ++|.+++..... ...+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 81 LS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred CC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 97 689888865222 2568999999999999999999998 89999999999999999999999999998754332
Q ss_pred CceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc---------
Q 002346 741 KYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--------- 810 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 810 (933)
. .......+++.|+|||++.+. .++.++||||||+++|||+||+.||....+.+. ............
T Consensus 155 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 155 V-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred c-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchh
Confidence 2 122334678999999987654 578899999999999999999999976533211 111111000000
Q ss_pred -CCCCcccCCCCC--CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 -ENIPKAIDPNLN--LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 -~~~~~~~d~~l~--~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......++.... ..........++.+++.+|++.||++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000 00000012245679999999999999999999976
No 206
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-34 Score=308.66 Aligned_cols=250 Identities=32% Similarity=0.511 Sum_probs=204.0
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.++|++.+.||+|+||.||+|.. .|+.||+|.+..... ..+++.+|+.+++.++|+||+++++++......++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 35788899999999999999987 488999999976532 45789999999999999999999999998899999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.... ...+++..+..++.|++.|++|||+ ++++||||||+||+++.++.+||+|||.++....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 81 YMAKGSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred ecCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccc
Confidence 999999999996521 2368999999999999999999998 8999999999999999999999999999886643
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... ...++..|+|||++..+.++.++||||||+++||+++ |+.||......+ +.... .... .....
T Consensus 155 ~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~----~~~~--~~~~~ 221 (256)
T cd05039 155 GQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHV----EKGY--RMEAP 221 (256)
T ss_pred ccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----hcCC--CCCCc
Confidence 221 2234668999999988889999999999999999997 999987543221 11111 1110 10011
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
. .....+.+++.+|+..+|++||++.+++++|+.
T Consensus 222 ~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 E---------GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred c---------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1 112457799999999999999999999998864
No 207
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.3e-34 Score=310.71 Aligned_cols=253 Identities=30% Similarity=0.481 Sum_probs=196.0
Q ss_pred CccccCCCeEEEEEEeC-CCc--EEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecC
Q 002346 587 NILGRGGFGVVYGGELP-DGT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.||+|+||.||+|... ++. .+|+|.++... .....+.+.+|++++.++ +||||+++++++......++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 36899999999999764 343 46888876432 334456889999999999 79999999999999999999999999
Q ss_pred CCChhhHhhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 663 RGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 663 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
+|+|.+++..... .....+++.++..++.|++.|++|||+ ++++||||||+||++++++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCC
Confidence 9999999975321 112358899999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
|++....... .......+..|+|||++....++.++||||||+++|||++ |+.||......+ . ...... .
T Consensus 157 gl~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~---~~~~~~-~ 227 (270)
T cd05047 157 GLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---L---YEKLPQ-G 227 (270)
T ss_pred CCccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---H---HHHHhC-C
Confidence 9986322111 1111234567999999988889999999999999999997 999996543211 1 111111 1
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
... + ... .....+.+++.+|++.+|.+||+++++++.|+++.
T Consensus 228 ~~~-~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRL-E-KPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCC-C-CCC---------cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 110 0 000 11235779999999999999999999999998764
No 208
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-36 Score=317.06 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=202.6
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 658 (933)
...|+++++||+||.+.||++...+.+.||+|++.....+.....-|..|+..|.+|+ |.+||++++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4568889999999999999999888899999988877777788899999999999994 999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||= ..+|..+|.... .....| .++.+..|++.|+.++|. +||||.||||.|+|+ -+|.+||+|||+|....
T Consensus 440 E~G-d~DL~kiL~k~~---~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK---SIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQ 510 (677)
T ss_pred ecc-cccHHHHHHhcc---CCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEE-EeeeEEeeeechhcccC
Confidence 975 679999997632 123334 788899999999999999 999999999999999 56789999999999777
Q ss_pred CCCcee-ecccccccCcccccccCCC-----------CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHH
Q 002346 739 DGKYSV-ETRLAGTFGYLAPEYAATG-----------RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRV 806 (933)
Q Consensus 739 ~~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~ 806 (933)
.+.... ....+||+.||+||.+... +.++++||||+||++|+|+.|+.||.... ....-+..
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~aKl~a- 584 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQIAKLHA- 584 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHHHHHHh-
Confidence 655433 4567999999999988432 25679999999999999999999996431 11111111
Q ss_pred hhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 807 LISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 807 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.||.-.++........+++++++.||..||.+||+..++++
T Consensus 585 ---------I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 585 ---------ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ---------hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 222221111111111223789999999999999999999987
No 209
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-35 Score=317.25 Aligned_cols=256 Identities=22% Similarity=0.388 Sum_probs=205.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
..+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..+...++||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 36889999999999999999964 579999999987653 233467889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++.. ..+++.++..++.|++.|++|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 96 e~~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 96 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred cccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 99999999999854 457899999999999999999998 899999999999999999999999999987654
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.... ......|++.|+|||++.+..++.++|||||||++|++++|+.||....+...... ......+....
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--------~~~~~~~~~~~ 237 (297)
T cd06656 167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--------IATNGTPELQN 237 (297)
T ss_pred CCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--------eccCCCCCCCC
Confidence 3322 12334688999999999888899999999999999999999999976433211100 00000111000
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
.......+.+++.+|++.+|++||++.++++ ++|...
T Consensus 238 --------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~------~~~~~~ 274 (297)
T cd06656 238 --------PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ------HPFLKL 274 (297)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCcCHHHHhc------Cchhcc
Confidence 1112234678999999999999999999987 566543
No 210
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=316.78 Aligned_cols=257 Identities=27% Similarity=0.477 Sum_probs=211.3
Q ss_pred cCCccCCccccCCCeEEEEEEeCC---C--cEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD---G--TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
+.....++||.|-||.||+|.+.+ | -.||||..+.+. +.+..+.|..|..+|++++|||||+++|.|.+ ...|
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 445567899999999999995532 3 358899887754 44557899999999999999999999999975 5689
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+|||.++-|.|..||+..+ ..++..+...++.|++.||+|||+ ..+|||||.++|||+.....||++|||+++
T Consensus 467 ivmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred EEEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhh
Confidence 9999999999999997632 458899999999999999999999 899999999999999999999999999999
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
...+..++..+...-+..|||||.+.-.+++.++|||.|||.+||++. |..||......+... .+...+.+|
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-------~iEnGeRlP 612 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-------HIENGERLP 612 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-------EecCCCCCC
Confidence 998887766665455679999999999999999999999999999887 999998754332210 111122221
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
. .+ ..+..+..++.+||..+|.+||.+.++...|..+..
T Consensus 613 ~--------P~---nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 613 C--------PP---NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred C--------CC---CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1 11 222356789999999999999999999999988765
No 211
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=323.39 Aligned_cols=194 Identities=25% Similarity=0.349 Sum_probs=165.9
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++..+...++|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 3467999999999999999999654 5788999975433 235689999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+ .++|.+++... ...+++.++..|+.||++||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 136 ~e~~-~~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 136 LPHY-SSDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEcc-CCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9999 56898888541 2568999999999999999999999 89999999999999999999999999998754
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCC
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDD 790 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~ 790 (933)
.... ......||+.|+|||++.+..++.++|||||||++|||+++..|+..
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~ 258 (357)
T PHA03209 208 VVAP--AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE 258 (357)
T ss_pred ccCc--ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence 3221 12345799999999999988999999999999999999997665543
No 212
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.3e-34 Score=313.20 Aligned_cols=262 Identities=27% Similarity=0.437 Sum_probs=200.2
Q ss_pred cCCccCCccccCCCeEEEEEEe-----CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--Cce
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSE 653 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 653 (933)
.+|++.+.||+|+||.||++.. .+++.||+|++... .....+.|.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4688899999999999999864 35889999998755 34456789999999999999999999998754 346
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||++++++.+||+|||+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred eEEEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcc
Confidence 78999999999999999642 2458999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCcee--ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchh---------hHHHHH
Q 002346 734 VKNAPDGKYSV--ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDR---------AHLVTW 802 (933)
Q Consensus 734 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~---------~~~~~~ 802 (933)
++......... .....++..|+|||++.+..++.++||||||+++|||++|..++......-. ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 98665432211 1122344569999999888899999999999999999999876643211000 000000
Q ss_pred HHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 803 FRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 803 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
...........+ .. ......+.+++.+|++.+|++|||+.++++.|+.+
T Consensus 235 ~~~~~~~~~~~~--~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLP--AP---------PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCC--CC---------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 001111111000 00 11124578999999999999999999999998764
No 213
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-34 Score=307.42 Aligned_cols=252 Identities=21% Similarity=0.346 Sum_probs=206.9
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|+..+.||+|+||.||.++ ..+++.+++|++.....+....+++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58889999999999999984 45689999999877655666678899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.... ...+++.++..++.|+++|++|||+ .+++||||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 81 ANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred cCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 99999999996522 2468999999999999999999998 89999999999999999999999999998865443
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. ......|++.|+|||+..+..++.++||||||+++|||++|+.||......+. ...... ..... ..
T Consensus 155 ~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~------~~~~~~--~~~~~-~~-- 222 (256)
T cd08221 155 YS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL------VVKIVQ--GNYTP-VV-- 222 (256)
T ss_pred cc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHc--CCCCC-Cc--
Confidence 32 22345789999999999888889999999999999999999999976433211 111111 11111 11
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.....++.+++.+|++.+|++||++.++++.
T Consensus 223 -------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 -------SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -------cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1112457799999999999999999999873
No 214
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.7e-35 Score=308.98 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=202.3
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||++.. .+++.||+|.++... .....+.+.+|+.+++.++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 578889999999999999955 468999999986543 234567888999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ....+++..++.++.|+++|++|||+ ++|+|+||||+||++++++.++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 80 CDGGDLMQKIKLQ---RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 9999999988542 22457899999999999999999998 89999999999999999999999999998755432
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||........ ...... .... .+...
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~~~~--~~~~-~~~~~ 223 (255)
T cd08219 154 GA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL------ILKVCQ--GSYK-PLPSH 223 (255)
T ss_pred cc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH------HHHHhc--CCCC-CCCcc
Confidence 21 12335789999999999888899999999999999999999999976432111 111111 1111 11111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....+.+++.+||+.+|++||++.+++.
T Consensus 224 ---------~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 224 ---------YSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ---------cCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 1235679999999999999999999986
No 215
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-35 Score=330.71 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=199.5
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC---CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
...+|.+.+.||+|+||.||++... .+..||+|.+... ..+.+|++++++++|||||++++++......+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 3468999999999999999998542 4678999987643 24568999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+|||++. ++|.+++.. ...+++.+++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 163 lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~ 233 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAAC 233 (392)
T ss_pred EEehhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCcccc
Confidence 9999995 688888843 2568999999999999999999998 899999999999999999999999999997
Q ss_pred cCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhh-HHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRA-HLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 813 (933)
........ ......||+.|+|||++....++.++|||||||++|||++|+.||......... .+...+..........
T Consensus 234 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred ccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence 65443222 223467999999999999889999999999999999999999999765432211 1111111100000000
Q ss_pred Cc---------------ccCCCCCCCh--hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PK---------------AIDPNLNLDE--ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~---------------~~d~~l~~~~--~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+. ...+...... ........+.+++.+|++.||++||++.|++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 0000000000 00011235678999999999999999999987
No 216
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.6e-34 Score=312.40 Aligned_cols=263 Identities=26% Similarity=0.448 Sum_probs=202.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-----CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ce
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SE 653 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 653 (933)
..|++.+.||+|+||.||++.. .++..||+|.++... .......+.+|+++++.++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3568899999999999999963 357899999987553 344457899999999999999999999998775 56
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++++|.+++... ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcc
Confidence 78999999999999998542 2358999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCc--eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCc--------hhhHHHHHH
Q 002346 734 VKNAPDGKY--SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPD--------DRAHLVTWF 803 (933)
Q Consensus 734 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~--------~~~~~~~~~ 803 (933)
++....... .......|+..|+|||++.+..++.++||||||+++|||++++.|....... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 886544322 1223345777899999998888999999999999999999988765432110 000000111
Q ss_pred HHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 804 RRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 804 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
..........+ .. ......+.+++.+|++.+|++||++.++++.++.+
T Consensus 236 ~~~~~~~~~~~--~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLP--RP---------PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCC--CC---------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111111100 00 01224688999999999999999999999998765
No 217
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.8e-35 Score=330.01 Aligned_cols=262 Identities=22% Similarity=0.284 Sum_probs=196.4
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
...|.+.+.||+|+||.||++.. ..++.||||.... ..+.+|++++++++|+|||++++++..++..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 45799999999999999999965 4578999996432 24678999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|++ .++|.+++... ...+++.+++.|+.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 240 e~~-~~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 240 PKY-RSDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred Ecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 999 47898888541 2469999999999999999999998 899999999999999999999999999997654
Q ss_pred CCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCc-----hhhHHHHHHHHHhhccCC
Q 002346 739 DGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPD-----DRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 739 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 812 (933)
.... .......||+.|+|||++.+..++.++|||||||++|||++|..|+...... ....+...+.........
T Consensus 312 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 312 GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred cccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 3221 1223457999999999999999999999999999999999988766432211 111122222211110111
Q ss_pred CCcccCCCC--------------CCChhhH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNL--------------NLDEETI----ESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l--------------~~~~~~~----~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+......+ ......+ .....+.+++.+||+.||++||++.|+++
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 111000000 0000001 11125678999999999999999999987
No 218
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.6e-35 Score=309.76 Aligned_cols=249 Identities=29% Similarity=0.476 Sum_probs=199.1
Q ss_pred CccccCCCeEEEEEEeCC--C--cEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 587 NILGRGGFGVVYGGELPD--G--TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+++.+|+.++++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999996533 3 36999999876543 566789999999999999999999999988 88899999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+++|.+++..... ..+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 79 LGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred CCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9999999966221 468999999999999999999998 8999999999999999999999999999986644221
Q ss_pred e--eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 743 S--VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 743 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
. ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....... ...... ..
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~---~~~~~~--~~- 223 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKIDK---EGERLE--RP- 223 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHh---cCCcCC--CC-
Confidence 1 1223457789999999998899999999999999999999 999997543322 1111111 111110 00
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
......+.+++.+|++.+|++||+++++++.|.
T Consensus 224 --------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 --------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011245779999999999999999999998774
No 219
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-34 Score=313.52 Aligned_cols=256 Identities=23% Similarity=0.400 Sum_probs=204.5
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||++.. .+++.||+|++.... .....+.+.+|+++++.++||||+++++++......++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 5688889999999999999965 468899999886543 34446789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. .+++++..+..++.++++|+.|||+ .++++||||||+||++++++.++|+|||++.....
T Consensus 84 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 84 FMDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred cCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 9999999998854 2468999999999999999999996 25899999999999999999999999999865432
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCc-----hhhHHHHHHHHHhhccCCCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPD-----DRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 814 (933)
.. .....|+..|+|||++.+..++.++|||||||++||+++|+.||....+. .......+........
T Consensus 157 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (284)
T cd06620 157 SI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP---- 229 (284)
T ss_pred hc---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----
Confidence 21 12357899999999998888999999999999999999999999865432 1111222222222111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.+.+.. ......+.+++.+|++.+|++||++.|+++.
T Consensus 230 ---~~~~~~----~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 230 ---PPRLPS----SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ---CCCCCc----hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 011110 0123457899999999999999999999874
No 220
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.4e-34 Score=310.43 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=202.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CC---cEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DG---TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
.+|++.+.||+|+||.||+|... ++ ..||||.+.... ......+|..|+.+++.++||||+++++++..+...++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 35788999999999999999654 23 369999987542 34556789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||+++++|.+++... ...+++.+++.++.|++.|++|||+ ++++||||||+||+++.++.+||+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 83 ITEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred EEecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccc
Confidence 99999999999998642 2458999999999999999999998 8999999999999999999999999999875
Q ss_pred CCCCCcee--ecccc--cccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccC
Q 002346 737 APDGKYSV--ETRLA--GTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKE 811 (933)
Q Consensus 737 ~~~~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 811 (933)
........ ..... .+..|+|||++.+..++.++|||||||++||+++ |..||...... ....++. ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~----~~~ 228 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE----QDY 228 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH----cCC
Confidence 54322111 11111 2457999999998899999999999999999887 99999765332 1222211 111
Q ss_pred CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 812 NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 812 ~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
..+. .+ +....+.+++.+|++.+|++||++.+++..|+.+
T Consensus 229 ~~~~--~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 RLPP--PM---------DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCC--cc---------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 01 1123567899999999999999999999998765
No 221
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.1e-34 Score=308.28 Aligned_cols=252 Identities=24% Similarity=0.443 Sum_probs=201.7
Q ss_pred CCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC----chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 582 NFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG----NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
+|++.+.||+|+||.||+|...+++.+|+|.+...... ......+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47889999999999999998778999999988754321 23346789999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++.+ ..++++..+..++.|++.|++|||+ .+|+|+||+|+||++++++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 81 MEFVPGGSISSILNR-----FGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 999999999999965 2457899999999999999999998 89999999999999999999999999998754
Q ss_pred CCCC-----ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 738 PDGK-----YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 738 ~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
.... ........|+..|+|||++.+..++.++||||||+++|||++|+.||........ . .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~--~----~~~~~~~~~ 226 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA--M----FYIGAHRGL 226 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH--H----HHhhhccCC
Confidence 3211 1112235689999999999988899999999999999999999999975432111 1 011111111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+. +... ...++.+++.+|++.+|++||++.++++
T Consensus 227 ~~~-~~~~---------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 MPR-LPDS---------FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC-CCCC---------CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 1111 1245779999999999999999999875
No 222
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-34 Score=307.57 Aligned_cols=248 Identities=30% Similarity=0.459 Sum_probs=198.8
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEee-eCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI-NGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||++.. .|+.||+|.+... ...+.|.+|+.++++++|+|++++++++. .+...++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 4788899999999999999977 5888999988643 23467899999999999999999999765 4567899999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 81 YMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred CCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 99999999998652 22458899999999999999999998 8999999999999999999999999999875443
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.. ....++..|+|||++....++.++|||||||++|||++ |+.||..... ......+.. . ......
T Consensus 155 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~-----~-~~~~~~ 221 (256)
T cd05082 155 TQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEK-----G-YKMDAP 221 (256)
T ss_pred cC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhc-----C-CCCCCC
Confidence 22 22345678999999988889999999999999999998 9999865422 111111111 1 111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
+. ....+.+++.+|++.+|++||+++++++.|+.
T Consensus 222 ~~---------~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DG---------CPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CC---------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11 12457799999999999999999999998865
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-34 Score=308.29 Aligned_cols=250 Identities=25% Similarity=0.459 Sum_probs=200.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-------hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-------KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
+|.+.+.||+|+||.||+|.. .+++.||+|.+....... ...+.+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999954 468899999887653221 123578899999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++++|.+++.. ...+++..+..++.|++.|++|||+ .+++||||+|+||++++++.++|+|||.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred cEEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCC
Confidence 9999999999999999965 2458899999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCce-----eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 734 VKNAPDGKYS-----VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 734 a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
++........ ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||........ . .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~ 226 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--I----FKIGE 226 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--H----HHHhc
Confidence 8865422111 11224588999999999888899999999999999999999999976432111 1 11110
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....++. .....+.+++.+|++.+|.+||++.++++
T Consensus 227 ---~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 ---NASPEIPS---------NISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---cCCCcCCc---------ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11111111 11245779999999999999999999986
No 224
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-34 Score=310.45 Aligned_cols=259 Identities=29% Similarity=0.480 Sum_probs=203.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 654 (933)
++|++.+.||+|+||.||+|..+ +.+.||+|.+.... .....+++.+|++++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 57889999999999999999753 34679999886542 223457899999999999999999999999988899
Q ss_pred EEEEeecCCCChhhHhhhcccCC----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHG----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
++||||+++|+|.+++....... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999997632111 1258999999999999999999998 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
||+++..............++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~---~~~~- 233 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLN---RLQA- 233 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHH---HHHc-
Confidence 99987544333222333456788999999988888999999999999999999 778886533211 111 1111
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.......... ....+.+++.+|++.+|++||++.|+++.|.
T Consensus 234 -~~~~~~~~~~---------~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -GKLELPVPEG---------CPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -CCcCCCCCCC---------CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111111111 1236779999999999999999999998874
No 225
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-34 Score=310.15 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=203.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||.|+||.||+|.. .+++.||+|.+.... .......+.+|+++++.++|+||+++++++.++...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 3688889999999999999965 468999999987653 34445778999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. .++++..++.++.|++.|+.|||+ ++++||||+|+||++++++.++|+|||+++....
T Consensus 80 ~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 80 YCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred eeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 9999999999864 268999999999999999999998 8999999999999999999999999999886654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.. .......|++.|+|||++.+..++.++||||||+++|||+||+.||....+... ..... ....+.....
T Consensus 151 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------~~~~~--~~~~~~~~~~ 221 (274)
T cd06609 151 TM-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------LFLIP--KNNPPSLEGN 221 (274)
T ss_pred cc-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------HHHhh--hcCCCCCccc
Confidence 32 122345788999999999888899999999999999999999999976432211 11111 1111111110
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ....+.+++.+|++.+|++||+++++++
T Consensus 222 ~---------~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 K---------FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred c---------cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 2235778999999999999999999987
No 226
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.4e-34 Score=310.56 Aligned_cols=258 Identities=26% Similarity=0.423 Sum_probs=204.0
Q ss_pred hcCCccCCccccCCCeEEEEEEeCC----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
.++|.+.+.||+|+||.||+|...+ ...||+|...... .....+.+.+|+.+++.++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 3568889999999999999996533 3468999886553 24456789999999999999999999998875 5578
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+++++|.+++... ...+++.+++.++.+++.|++|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 83 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~ 155 (270)
T cd05056 83 IVMELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSR 155 (270)
T ss_pred EEEEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceee
Confidence 999999999999999652 2358999999999999999999998 899999999999999999999999999988
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
..............+++.|+|||.+....++.++||||||+++||+++ |+.||......+. ..++. . ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~~~---~-~~~~~ 228 (270)
T cd05056 156 YLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IGRIE---N-GERLP 228 (270)
T ss_pred ecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHH---c-CCcCC
Confidence 665443322233345678999999988889999999999999999986 9999976533211 11111 1 11111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
..+. ....+.+++.+|+..+|++||++.++++.|+++..
T Consensus 229 --~~~~---------~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 229 --MPPN---------CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred --CCCC---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111 12357789999999999999999999999987653
No 227
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-34 Score=313.52 Aligned_cols=268 Identities=22% Similarity=0.293 Sum_probs=202.1
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.++++++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999664 68999999987654333344678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++++.|..++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999888877643 2458999999999999999999999 8999999999999999999999999999986654
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH-HHHHH------hhccC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT-WFRRV------LISKE 811 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~-~~~~~------~~~~~ 811 (933)
... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+...... ..... .....
T Consensus 153 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 153 PGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred Ccc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 321 1223467889999999865 457899999999999999999999997654322211110 00000 00000
Q ss_pred C-CCcccCCCCCC--C--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 N-IPKAIDPNLNL--D--EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~-~~~~~d~~l~~--~--~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ......+.... . .........+.+++.+|++.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 00000000000 0 000112346789999999999999999999875
No 228
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.3e-34 Score=319.56 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=195.8
Q ss_pred cCCccccC--CCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 585 EANILGRG--GFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 585 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
++++||+| +|++||++.. .+|+.||+|++..........+.+++|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 6789999954 67899999999876544455667888999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++|+|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.++++||+.........
T Consensus 82 ~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999986522 2358999999999999999999998 899999999999999999999999998654322111
Q ss_pred ce------eecccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 742 YS------VETRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 742 ~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~------~~~~ 227 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKL------NGTV 227 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHh------cCCc
Confidence 10 0112356778999999875 4588999999999999999999999975432111 11100 0001
Q ss_pred CcccC-------------------CCC----------------CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAID-------------------PNL----------------NLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d-------------------~~l----------------~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+..++ ... ............+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 10000 000 000011122346789999999999999999999986
No 229
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-34 Score=315.50 Aligned_cols=249 Identities=21% Similarity=0.408 Sum_probs=202.6
Q ss_pred cCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.+|++.+.||.|+||.||+|. ..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 468999999999999999995 4678999999987543 3345678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ..+++.++..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 97 YLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred ecCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999998854 458999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....+..... .. .. ...+....+
T Consensus 168 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~---~~---~~--~~~~~~~~~ 238 (296)
T cd06655 168 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LI---AT--NGTPELQNP 238 (296)
T ss_pred ccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HH---Hh--cCCcccCCc
Confidence 322 1223468899999999988889999999999999999999999997754322211 11 10 001110000
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......+.+++.+||..+|++||++.++++
T Consensus 239 --------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 239 --------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --------ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 011235678999999999999999999986
No 230
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-34 Score=311.11 Aligned_cols=252 Identities=23% Similarity=0.389 Sum_probs=199.8
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|.. .+++.||+|+++... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 5788889999999999999954 568999999987652 3334578899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ...+++.++..++.|++.|++|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 87 FCGGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred ccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 9999999999854 2468999999999999999999999 8999999999999999999999999999875543
Q ss_pred CCceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.. .......|++.|+|||++. .+.++.++|||||||++|||++|+.||....+....... .. ....+..
T Consensus 159 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~------~~-~~~~~~~ 230 (267)
T cd06645 159 TI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM------TK-SNFQPPK 230 (267)
T ss_pred cc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh------hc-cCCCCCc
Confidence 22 1223457899999999874 456889999999999999999999998754432221110 00 0000111
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..... .....+.+++.+|++.+|++||+++++++
T Consensus 231 ~~~~~-------~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKDKM-------KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccccC-------CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11000 11134679999999999999999999875
No 231
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.8e-34 Score=317.40 Aligned_cols=198 Identities=26% Similarity=0.401 Sum_probs=161.6
Q ss_pred CCccccCCCeEEEEEEeC---CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--CceeEEEEee
Q 002346 586 ANILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEY 660 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 660 (933)
.++||+|+||.||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999653 567899999875432 2457889999999999999999998854 4567899999
Q ss_pred cCCCChhhHhhhccc----CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe----cCCCcEEEeccc
Q 002346 661 MPRGTLAQHLFEWHD----HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDMRAKVADFG 732 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill----~~~~~~kl~DfG 732 (933)
+. ++|.+++..... .....+++..+..++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 85 588888754221 112358999999999999999999999 899999999999999 456789999999
Q ss_pred ccccCCCCCc--eeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCC
Q 002346 733 LVKNAPDGKY--SVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDT 791 (933)
Q Consensus 733 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~ 791 (933)
+++....... .......||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9986543221 12234578999999999876 45899999999999999999999999754
No 232
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.2e-34 Score=306.66 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=202.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee-CceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 659 (933)
+|++.+.||+|++|.||++.. .+++.||+|++..........+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 488899999999999999954 467899999997665455566788999999999999999999998764 446789999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ....+++.++..++.+++.|++|||+ .+|+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~---~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 81 FCEGGDLYHKLKEQ---KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ccCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 99999999999652 22468999999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.. .......|++.|+|||++.+..++.++||||+|+++|||++|+.||....... ....... ...+. +.
T Consensus 155 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~------~~~~~~~--~~~~~-~~- 223 (257)
T cd08223 155 QC-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS------LVYRIIE--GKLPP-MP- 223 (257)
T ss_pred cC-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHh--cCCCC-Cc-
Confidence 22 12234568999999999998899999999999999999999999997543211 1111111 11111 11
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......+.+++.+|++.+|++||++.++++
T Consensus 224 --------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 --------KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --------cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 112245779999999999999999999986
No 233
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.4e-34 Score=313.52 Aligned_cols=263 Identities=23% Similarity=0.372 Sum_probs=203.9
Q ss_pred ecHHHHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEe
Q 002346 571 ISIEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYC 648 (933)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 648 (933)
+.++.+..+.++|++.+.||+|+||.||++.. .+++.||+|++.... ....++.+|+.+++.+ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 34466677789999999999999999999954 468899999876432 2235788899999999 699999999987
Q ss_pred e-----eCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 649 I-----NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 649 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
. .+...++||||+++++|.+++...... ...+++..+..++.|+++|+.|||+ .+|+||||||+||+++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~ 160 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTE 160 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCC
Confidence 4 345689999999999999988653222 3568899999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCceeecccccccCcccccccCC-----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH
Q 002346 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH 798 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~ 798 (933)
+.+||+|||+++....... ......|++.|+|||++.. ..++.++||||+||++|||++|+.||....+...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-- 237 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-- 237 (286)
T ss_pred CCEEEccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--
Confidence 9999999999876543222 1223468999999998753 4578899999999999999999999976433211
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.. .. ....+...++.. ....+.+++.+|++.+|++||++.|+++
T Consensus 238 ~~~----~~--~~~~~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 238 LFK----IP--RNPPPTLHQPEL--------WSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred Hhh----cc--ccCCCcccCCCC--------cCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 100 00 111111111111 1135779999999999999999999987
No 234
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2e-34 Score=307.52 Aligned_cols=239 Identities=24% Similarity=0.415 Sum_probs=187.3
Q ss_pred CccccCCCeEEEEEEeCC-------------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 587 NILGRGGFGVVYGGELPD-------------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
+.||+|+||.||+|...+ ...||+|.+.... ......|.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 468999999999996532 2358899876542 3345678899999999999999999999999889
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc-------E
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR-------A 726 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~-------~ 726 (933)
.++||||+++++|..++... ...+++..++.++.|+++|++|||+ ++|+||||||+||+++.++. +
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred CEEEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCcee
Confidence 99999999999999888541 2458999999999999999999998 89999999999999987664 8
Q ss_pred EEecccccccCCCCCceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHH-cCCCCCCCCCCchhhHHHHHHH
Q 002346 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETI-TGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 727 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~ell-tG~~p~~~~~~~~~~~~~~~~~ 804 (933)
+++|||++...... ....|+..|+|||++. +..++.++|||||||++|||+ +|+.|+......+.. .+
T Consensus 152 ~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~----~~- 221 (262)
T cd05077 152 KLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE----RF- 221 (262)
T ss_pred EeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH----HH-
Confidence 99999998754322 2246788999999886 467899999999999999998 588887653221110 00
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
. .... ....+ ....+.+++.+||+.||++||++.++++.+
T Consensus 222 --~--~~~~-~~~~~----------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 --Y--EGQC-MLVTP----------SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --H--hcCc-cCCCC----------ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0100 00110 123577999999999999999999999865
No 235
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.8e-34 Score=309.26 Aligned_cols=254 Identities=25% Similarity=0.382 Sum_probs=189.0
Q ss_pred CccccCCCeEEEEEEeCCC---cEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGELPDG---TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|...++ ..+++|.+.... .....+.|.+|+.+++.++||||+++++++......++||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 3599999999999965443 345677665442 234467899999999999999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC-c
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK-Y 742 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~-~ 742 (933)
|+|.+++...... ....++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 80 GDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 9999999763221 2456778888999999999999998 899999999999999999999999999986432221 1
Q ss_pred eeecccccccCcccccccCC-------CCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAAT-------GRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
.......|+..|+|||++.. ..++.++||||||+++|||++ |..||....+.+. +..... ....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~------~~~~~~--~~~~ 227 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREV------LNHVIK--DQQV 227 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHh--hccc
Confidence 12234568899999998743 245789999999999999997 4667765432211 111111 1112
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
...++.+... ....+.+++..|+ .+|++||+++++++.|
T Consensus 228 ~~~~~~~~~~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 228 KLFKPQLELP-----YSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ccCCCccCCC-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 2223332211 1134667888999 6799999999999876
No 236
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-34 Score=307.88 Aligned_cols=252 Identities=32% Similarity=0.516 Sum_probs=202.3
Q ss_pred CccccCCCeEEEEEEeCC----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 587 NILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|+++++.++|+||+++++++..+...++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 469999999999996643 8899999998764332 46789999999999999999999999999999999999999
Q ss_pred CCChhhHhhhcccC----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 663 RGTLAQHLFEWHDH----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 663 ~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
+++|.+++...... ....+++.+++.++.|+++|++|||+ ++++||||||+||++++++.+||+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999763111 02568999999999999999999998 899999999999999999999999999998665
Q ss_pred CCCc-eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 739 DGKY-SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 739 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.... .......+++.|+|||.+....++.++||||+|+++|||++ |+.||....... ... .... .... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~~~~-~~~~--~ 227 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLE---YLRK-GYRL--P 227 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---HHHc-CCCC--C
Confidence 4321 12234567889999999988889999999999999999999 589997653221 111 1111 1110 0
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
... ....++.+++.+|++.+|++||++.++++.|+
T Consensus 228 ~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KPE---------YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCc---------cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 001 11246789999999999999999999998763
No 237
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.8e-34 Score=307.01 Aligned_cols=257 Identities=22% Similarity=0.391 Sum_probs=202.6
Q ss_pred CCccCCccccCCCeEEEEEEeCC--CcEEEEEEecccc--------CCchhHHHHHHHHHHHHh-cCCCcceeEEeEeee
Q 002346 582 NFSEANILGRGGFGVVYGGELPD--GTKIAVKRMESNT--------MGNKGLSEFQAEIAVLTK-VRHRHLVALLGYCIN 650 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 650 (933)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... .......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999997654 6889999876432 122345667888888875 699999999999999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
++..++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ ..+++||||+|+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988553222 3568999999999999999999995 26899999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
||++....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||........ ......
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~------~~~~~~-- 227 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL------ATKIVE-- 227 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH------HHHHhh--
Confidence 99988655432 23345789999999999988899999999999999999999999975432211 111111
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
........ ......+.+++.+|++.||++||++.|+.++++
T Consensus 228 ~~~~~~~~---------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 AVYEPLPE---------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCCcCCc---------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110000 011235779999999999999999999999875
No 238
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.5e-34 Score=309.97 Aligned_cols=254 Identities=23% Similarity=0.400 Sum_probs=197.9
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
..++++.....||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3455666667899999999999964 467889999887552 3345689999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCC--CHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEecccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPL--TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGL 733 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGl 733 (933)
||||+++++|.+++.... .++ ++..+..++.|+++|++|||+ .+|+||||||+||+++. ++.++|+|||+
T Consensus 83 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchh
Confidence 999999999999996521 234 788899999999999999998 89999999999999986 67999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCCCC--CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAATGR--VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE 811 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 811 (933)
+........ ......|++.|+|||++.... ++.++||||||+++|||++|+.||........ ..+.........
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~ 231 (268)
T cd06624 156 SKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFKIHP 231 (268)
T ss_pred heecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhccCC
Confidence 875543221 122346889999999986543 78899999999999999999999975422111 111111111011
Q ss_pred CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.++ .. ...++.+++.+|++.+|++||++.|+++
T Consensus 232 ~~~----~~---------~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 EIP----ES---------LSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCC----cc---------cCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111 11 1235778999999999999999999986
No 239
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.5e-35 Score=315.22 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=198.3
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+|+.||+|+++...........+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 478889999999999999965 4789999999876543344446788899999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
++ ++|.+++... ...+++..++.++.||++||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 96 5888887541 2458999999999999999999998 89999999999999999999999999998755432
Q ss_pred CceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc--------C
Q 002346 741 KYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--------E 811 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------~ 811 (933)
.. ......+++.|+|||++.+. .++.++|||||||++|||+||+.|+....... ..+ ..+....... .
T Consensus 153 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 153 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQL-KRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH-HHH-HHHHHHhCCCChHHhHHhh
Confidence 21 12234678999999988664 46899999999999999999999875433211 111 1111110000 0
Q ss_pred CCCccc-CCCCCC----ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIPKAI-DPNLNL----DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~~~~-d~~l~~----~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+... -+.... .........++.+++.+|++.||.+|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 000000 0001112346779999999999999999999976
No 240
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1e-34 Score=320.88 Aligned_cols=238 Identities=25% Similarity=0.358 Sum_probs=184.9
Q ss_pred cccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhc---CCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 589 LGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV---RHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 589 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
||+|+||.||+|.. .+++.||||++..... .......+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999955 4689999999865432 122334556677776665 699999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++.. ...+++..+..++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 81 GELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred ChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 999998864 2458999999999999999999999 8999999999999999999999999999875432221
Q ss_pred eecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLN 822 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 822 (933)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ...........++. ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~---~~~- 221 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNIAFGKVRFPK---NVL- 221 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHHHcCCCCCCC---ccC-
Confidence 12345799999999998654 47999999999999999999999997643211 11122211111111 011
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 002346 823 LDEETIESIYRVAELAGHCTAREPQQRPDMG 853 (933)
Q Consensus 823 ~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~ 853 (933)
...+.+++.+|++.+|++||++.
T Consensus 222 --------~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 222 --------SDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred --------CHHHHHHHHHHcCCCHHHCCCCC
Confidence 13466899999999999999543
No 241
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=319.23 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=202.5
Q ss_pred CCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
-|.++..||.|+||.||+|..++ +-..|.|++... +.++.++|.-|++++..++||+||++++.|+.++..|+..||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 35567789999999999996544 344567777654 567788999999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
|.||-.+..+-.. ...+.+.++..+++|++.||.|||+ +.|||||+|+.|||++-+|.++|+|||.+......
T Consensus 111 C~GGAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 111 CGGGAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred cCCchHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH
Confidence 9999999887542 3679999999999999999999999 89999999999999999999999999987543321
Q ss_pred CceeecccccccCccccccc-----CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 741 KYSVETRLAGTFGYLAPEYA-----ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
. .....+.|||+|||||+. ...+|++++||||||++|.||..+.+|-....++... -++ .+...|-
T Consensus 184 ~-qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl------lKi--aKSePPT 254 (1187)
T KOG0579|consen 184 R-QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL------LKI--AKSEPPT 254 (1187)
T ss_pred H-hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH------HHH--hhcCCCc
Confidence 1 223457899999999977 4568999999999999999999999998766554321 111 1222333
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.|. .....+.+++.+|+.++|..||+++++++
T Consensus 255 LlqPS--------~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 LLQPS--------HWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ccCcc--------hhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 33222 23356889999999999999999999876
No 242
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.5e-34 Score=308.66 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=197.6
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|++.+.||+|+||.||+|... ++..+|+|.+... .....+.+.+|+++++.++||||+++++++..+...++||||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 677889999999999999654 5788899988654 3445678899999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++++|..++... ..++++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 85 AGGAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999887541 2468999999999999999999999 899999999999999999999999999987554322
Q ss_pred ceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 742 YSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.......|++.|+|||++. ...++.++|||||||++|||++|+.||....+... ... ..... .+..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~----~~~~~--~~~~ 228 (282)
T cd06643 158 -QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLK----IAKSE--PPTL 228 (282)
T ss_pred -cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHH----HhhcC--CCCC
Confidence 1223356899999999873 34578899999999999999999999976432111 111 11100 0110
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+ ......+.+++.+|++.+|.+||++.++++
T Consensus 229 ~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 AQP--------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 011245779999999999999999999976
No 243
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-34 Score=315.77 Aligned_cols=269 Identities=23% Similarity=0.365 Sum_probs=202.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|.. .+++.||+|.++.... ......+.+|+.+++.++||||+++++++..+...++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 5789999999999999999955 4688999999875532 2334567889999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++ ++|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 85 YLD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred ccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 996 6898888652 2458899999999999999999999 8999999999999999999999999999875443
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--cCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS--KENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 816 (933)
... ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+...... ...++..
T Consensus 157 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 157 PTK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGI 232 (301)
T ss_pred CCC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCChhhchhh
Confidence 221 1123457899999998765 4578899999999999999999999976543221 1111111100 0001110
Q ss_pred cC---------CCCCCC---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 817 ID---------PNLNLD---EETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 817 ~d---------~~l~~~---~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
++ +..... .........+.+++.+|++.||.+|||++|+++ ++|..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~------h~~f~ 290 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK------HPYFH 290 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc------Ccccc
Confidence 00 000000 000111235679999999999999999999986 56654
No 244
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.7e-34 Score=312.85 Aligned_cols=265 Identities=25% Similarity=0.358 Sum_probs=203.9
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+|+.||+|++............+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 578899999999999999965 4789999999987654455567899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+ +++|.+++.... .++++.+++.++.|+++||+|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 81 M-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred c-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 9 999999986522 568999999999999999999998 89999999999999999999999999998866543
Q ss_pred CceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc---------
Q 002346 741 KYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--------- 810 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 810 (933)
.........|+..|+|||++.+. .++.++||||+|+++|||++|++||....+.. ...++.......
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE---QLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH---HHHHHHHHcCCCChHHHhhcc
Confidence 32223345789999999988654 46899999999999999999988776543211 111111111000
Q ss_pred --CCCCcccCCC---CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 --ENIPKAIDPN---LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 --~~~~~~~d~~---l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
........+. ........+....+.+++.+|++.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 0000000122357889999999999999999999986
No 245
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-34 Score=314.93 Aligned_cols=266 Identities=22% Similarity=0.326 Sum_probs=204.1
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|... +++.||+|+++.........+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999654 68899999987654445556789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++++.+..+... ...+++.++..++.|+++|++|||+ .+++||||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 81 YVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 9988766655532 2448999999999999999999998 8999999999999999999999999999886655
Q ss_pred CCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh----------
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI---------- 808 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~---------- 808 (933)
..........++..|+|||++.+. .++.++||||||+++|||++|+.||......+.. ........
T Consensus 153 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL---YLIQKCLGPLPPSHQELF 229 (288)
T ss_pred CccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHHHhhhc
Confidence 433233445788999999999887 7899999999999999999999999764332211 11111000
Q ss_pred -ccC-----CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 809 -SKE-----NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 809 -~~~-----~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
... ..++..++.............++.+++.+|++.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 0000000000000000112456889999999999999999999986
No 246
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.9e-34 Score=305.54 Aligned_cols=251 Identities=22% Similarity=0.366 Sum_probs=204.3
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||++.. .+|+.||+|++..........+++.+|+.++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 588899999999999999954 5789999999876544455567899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ....+++.++..++.|++.|++|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 81 CEGGDLYKKINAQ---RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 9999999998652 12357899999999999999999998 89999999999999999999999999998765443
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
... .....|++.|+|||+..+..++.++|||||||++|||++|+.||......+ ....... ...+. +..
T Consensus 155 ~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~~--~~~~~-~~~- 223 (256)
T cd08218 155 VEL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN------LVLKIIR--GSYPP-VSS- 223 (256)
T ss_pred hhh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH------HHHHHhc--CCCCC-Ccc-
Confidence 221 223468899999999988889999999999999999999999997543211 1112111 11111 111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|++.+|++||++.++++
T Consensus 224 --------~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 --------HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --------cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11245789999999999999999999986
No 247
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.5e-34 Score=302.41 Aligned_cols=248 Identities=31% Similarity=0.501 Sum_probs=198.9
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
++||+|+||.||++...+++.||+|++...... .....+.+|++++++++|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 469999999999998766999999988765432 4567899999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceee-
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE- 745 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~- 745 (933)
.+++... ...+++..+..++.+++.|++|||+ ++++||||||+||+++.++.+||+|||++...........
T Consensus 80 ~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 80 LTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9998542 2357899999999999999999998 8999999999999999999999999999886543322221
Q ss_pred cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 746 TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 746 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
....++..|+|||++.++.++.++||||||+++|||++ |..||....+..... . ........ ..
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~------~-~~~~~~~~--~~------ 217 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE------R-IESGYRMP--AP------ 217 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH------H-HhcCCCCC--CC------
Confidence 12234667999999988899999999999999999999 788886543322111 1 11111000 00
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
......+.+++.+|++.+|++||++.|+++.|+
T Consensus 218 ---~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 ---QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ---ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 011246789999999999999999999998774
No 248
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.23 Aligned_cols=276 Identities=17% Similarity=0.239 Sum_probs=193.1
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeC--CCcEEEEEE--------------eccc-cCCchhHHHHHHHHHHHHhcCCCc
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELP--DGTKIAVKR--------------MESN-TMGNKGLSEFQAEIAVLTKVRHRH 640 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~--------------~~~~-~~~~~~~~~~~~E~~~l~~l~h~n 640 (933)
...++|++++.||+|+||.||++..+ .+..+++|. +.+. .........+.+|+.++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34578999999999999999998543 222222221 1110 112233457889999999999999
Q ss_pred ceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 641 LVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 641 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
||++++++...+..++|+|++ +++|.+++..............++..|+.|++.||+|||+ ++||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence 999999999999999999998 4678887754322212234466788999999999999999 899999999999999
Q ss_pred cCCCcEEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCC-CCCCCCchhhHH
Q 002346 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKA-LDDTMPDDRAHL 799 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p-~~~~~~~~~~~~ 799 (933)
+.++.+||+|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.+ +..........+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999987655433333456799999999999999999999999999999999999864 433322222222
Q ss_pred HHHHHHHhhccCCCCcc-------cC--------CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 800 VTWFRRVLISKENIPKA-------ID--------PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~-------~d--------~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+.........+++. ++ ..+............+.+++.+|++.||++||++.|+++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 22221111001111100 00 000000000001124567899999999999999999986
No 249
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-34 Score=306.79 Aligned_cols=249 Identities=26% Similarity=0.448 Sum_probs=203.2
Q ss_pred cCCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|+..+.||+|+||.||+|...+ ++.||+|.+.... ..+++.+|++++++++||||+++++++..+...+++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 578899999999999999997654 7899999987542 16789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ...+++..+..++.|+++|++|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 79 ~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 79 YCGAGSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred cCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999998541 2568999999999999999999998 8999999999999999999999999999886654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|+..|+|||++.+..++.++||||||+++|||++|+.||....+...... . ..... +
T Consensus 152 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~--------~-~~~~~----~ 217 (256)
T cd06612 152 TMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM--------I-PNKPP----P 217 (256)
T ss_pred Ccc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh--------h-ccCCC----C
Confidence 321 22334588999999999888999999999999999999999999976433221100 0 00000 0
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+. ........+.+++.+|++.+|++||++.|+++
T Consensus 218 ~~~---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 TLS---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCC---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 111 11112245789999999999999999999986
No 250
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.5e-34 Score=311.10 Aligned_cols=263 Identities=29% Similarity=0.464 Sum_probs=204.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--Cce
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSE 653 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 653 (933)
+.|+..+.||+|+||.||+|... +++.||||++...... ...++|.+|+++++.++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 46778899999999999999653 3689999999866432 356789999999999999999999999877 557
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||.
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccc
Confidence 899999999999999996521 258999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCce--eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhh--------HHHHHH
Q 002346 734 VKNAPDGKYS--VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRA--------HLVTWF 803 (933)
Q Consensus 734 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~--------~~~~~~ 803 (933)
+......... ......++..|+|||+..+..++.++||||||+++|||++|+.|+......... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 9866533221 112234566799999998888999999999999999999999998653221100 000111
Q ss_pred HHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 804 RRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 804 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
..........+. . .....++.+++.+|++.+|++||++.|++++|+.+
T Consensus 236 ~~~~~~~~~~~~--~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPR--P---------PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCC--C---------ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111111100 0 11124688999999999999999999999999765
No 251
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-34 Score=309.69 Aligned_cols=238 Identities=24% Similarity=0.439 Sum_probs=186.8
Q ss_pred ccccCCCeEEEEEEeCC-------------------------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcce
Q 002346 588 ILGRGGFGVVYGGELPD-------------------------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLV 642 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 642 (933)
.||+|+||.||+|.... ...||+|++.... .....+|.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 69999999999996421 2358899886542 23346788999999999999999
Q ss_pred eEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC
Q 002346 643 ALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (933)
Q Consensus 643 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~ 722 (933)
++++++..+...++||||+++|+|..++... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLAR 152 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEec
Confidence 9999999999999999999999999988541 2458899999999999999999998 89999999999999976
Q ss_pred CC-------cEEEecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHH-cCCCCCCCCCC
Q 002346 723 DM-------RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETI-TGRKALDDTMP 793 (933)
Q Consensus 723 ~~-------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~ell-tG~~p~~~~~~ 793 (933)
.+ .+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||....+
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred cCcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 43 3899999987644322 12357888999998865 56899999999999999994 79999976543
Q ss_pred chhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 794 DDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.... .... .....+... ...+.+++.+||+.+|++||++.++++.|
T Consensus 228 ~~~~---~~~~----~~~~~~~~~-------------~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SEKE---RFYE----KKHRLPEPS-------------CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHH---HHHH----hccCCCCCC-------------ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 3221 1111 111111110 12477999999999999999999999876
No 252
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.9e-34 Score=307.52 Aligned_cols=258 Identities=27% Similarity=0.465 Sum_probs=205.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||.|+||.||+|.. .++..+|+|++....... ..+.+.+|+++++.++|+||+++++.+..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 4789999999999999999964 468899999987654333 56789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++..... ...+++..+..++.|++.|++|||+ .+|+||||+|+||++++++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 80 YLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred ccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 9999999999965221 2458999999999999999999998 8999999999999999999999999999876554
Q ss_pred CCce---eecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 740 GKYS---VETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 740 ~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.... ......|+..|+|||++... .++.++||||||+++|||++|+.||....+... ... ..... +.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~----~~~~~---~~ 225 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LML----TLQND---PP 225 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHH----HhcCC---CC
Confidence 3322 22334689999999998776 789999999999999999999999976533211 111 11111 00
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+............+.+++.+|++.+|++||++.++++
T Consensus 226 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 ----SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ----CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11100001122346779999999999999999999986
No 253
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.8e-34 Score=308.92 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=199.5
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+.|++.+.||+|+||.||+|.. .+++.||+|.+... .....+++.+|+.+++.++||||+++++++..+...++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 6788999999999999999965 45889999998754 34556789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|..++.+. ...+++..+..++.|++.|++|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 90 FCPGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred cCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999998887542 2458999999999999999999998 8999999999999999999999999998875433
Q ss_pred CCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
.. .......+++.|+|||++. ...++.++|||||||++|||++|+.||....+... ..... ....+
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~--~~~~~ 233 (292)
T cd06644 163 TL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIA--KSEPP 233 (292)
T ss_pred cc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH------HHHHh--cCCCc
Confidence 21 1123346889999999884 34568899999999999999999999976432111 11111 11111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... .......+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 TLSQ--------PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCCC--------CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1000 0111235778999999999999999999986
No 254
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.7e-34 Score=307.03 Aligned_cols=259 Identities=29% Similarity=0.476 Sum_probs=202.0
Q ss_pred CccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc------
Q 002346 583 FSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS------ 652 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 652 (933)
|.+.+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999642 3688999999876555566778999999999999999999999886532
Q ss_pred eeEEEEeecCCCChhhHhhhccc-CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
..++++||+.+|+|.+++..... .....+++..+..++.|++.|++|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 23788999999999998754221 112357899999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 732 GLVKNAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 732 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
|+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||...... ....+.. .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~---~- 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLI---K- 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHH---c-
Confidence 998865433221 1122345678999999988889999999999999999999 88888654321 1222111 1
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
..... ..+ .....+.+++.+|++.+|++||++.++++.|+++
T Consensus 231 ~~~~~--~~~---------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRLK--QPP---------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcCC--CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 001 1124678999999999999999999999998764
No 255
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.8e-34 Score=310.89 Aligned_cols=249 Identities=25% Similarity=0.443 Sum_probs=201.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|+.++++++||||+++++++..+...++|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 3466778899999999999954 468899999887553 23445789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ..+++..+..++.|+++|++|||+ ++++|+||+|+||++++++.++++|||++.....
T Consensus 83 ~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 83 YLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred ccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 9999999998853 458899999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|+..|+|||++.+..++.++||||||+++|||++|+.|+....+.... . . . .... .+
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~---~-~-~~~~-----~~ 219 (277)
T cd06642 154 TQI-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---F---L-I-PKNS-----PP 219 (277)
T ss_pred cch-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---h---h-h-hcCC-----CC
Confidence 321 122346889999999999888999999999999999999999998754332211 0 0 0 0111 11
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.+. ......+.+++.+|++.+|++||++.++++.
T Consensus 220 ~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 TLE-----GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCC-----cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111 1122457799999999999999999999973
No 256
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.9e-34 Score=305.35 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=205.4
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--CceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 658 (933)
+|++.+.||.|+||.||++. ..+++.||+|++..........+++..|+++++.++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47888999999999999995 4578899999998765556667789999999999999999999998754 45678999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcc--CCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA--QQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||+++++|.+++..... ...++++..++.++.|++.|++|||..+ ..+++|+||||+||+++.++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 99999999999976322 2357899999999999999999999221 28999999999999999999999999999886
Q ss_pred CCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
....... .....|++.|+|||++....++.++||||||+++|+|++|+.||...... .....+ . .... ..
T Consensus 160 ~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~---~--~~~~-~~ 229 (265)
T cd08217 160 LGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKI---K--EGKF-RR 229 (265)
T ss_pred ccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHH---h--cCCC-CC
Confidence 6543321 23346899999999998888999999999999999999999999765321 111111 1 1111 11
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.. .....+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~---------~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 230 IPY---------RYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred Ccc---------ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 111 12246779999999999999999999986
No 257
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=318.41 Aligned_cols=250 Identities=25% Similarity=0.448 Sum_probs=202.5
Q ss_pred ccCCccccCCCeEEEEEEeC--CCc--EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 584 SEANILGRGGFGVVYGGELP--DGT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
...++||+|.||.|++|.|. +|+ .||||.++...... ...+|.+|+.+|.+|+|||++++||...+ ....+|||
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 34688999999999999664 454 57999998875443 67899999999999999999999999876 67789999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
.++.|+|.+.|++ .....+-......++.|||.|+.||.+ +++||||+.++|+++.....|||+|||+.+....
T Consensus 191 LaplGSLldrLrk---a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK---AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hcccchHHHHHhh---ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999976 223568889999999999999999999 9999999999999999999999999999997665
Q ss_pred CCc-ee-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 740 GKY-SV-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 740 ~~~-~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.+. +. .....-...|+|||.+....++.++|||+|||++|||+| |..||-+......... +...+.+++
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~-------iD~~erLpR- 336 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN-------IDAGERLPR- 336 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh-------ccccccCCC-
Confidence 432 22 223344568999999999999999999999999999999 6678876543222111 112222221
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
. ..+.+.+.+++..||..+|++||++..+.+.+
T Consensus 337 -------P---k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 337 -------P---KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -------C---CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1 23345788999999999999999999998544
No 258
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6e-34 Score=304.90 Aligned_cols=251 Identities=24% Similarity=0.391 Sum_probs=195.4
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC---chhHHHHHHHHHHHHhcCCCcceeEEeEeee--Ccee
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 654 (933)
.+|+..+.||+|+||.||+|.. .++..||+|++...... ......+.+|+.++++++||||+++++++.. +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999954 56899999988754322 2345678899999999999999999998865 3567
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
+++|||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 82 ~l~~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~ 153 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA-----YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (266)
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence 899999999999999965 2458899999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCC--ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGK--YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
+...... ........++..|+|||++.+..++.++||||+||++|||++|+.||........ +..... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~-~~~ 226 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIAT-QPT 226 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhc-CCC
Confidence 7543211 1111234688999999999888899999999999999999999999975432111 111111 100
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.+. ......+.+++ +|+..+|++||++.|+++
T Consensus 227 -----~~~~~-----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 -----NPQLP-----SHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -----CCCCc-----hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11111 11123345666 688899999999999976
No 259
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4e-34 Score=305.57 Aligned_cols=251 Identities=29% Similarity=0.461 Sum_probs=192.3
Q ss_pred CccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEee-eCceeEEEEeec
Q 002346 587 NILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI-NGSERLLVYEYM 661 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 661 (933)
+.||+|+||.||+|... ++..||+|++.... .....+.+.+|+.+++.++||||+++++++. .+...++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999643 24579999875432 2344678899999999999999999999876 455678999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
.+++|.+++... ....++..+..++.|+++|++|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 80 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 80 KHGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 999999999652 1346788889999999999999998 899999999999999999999999999987554322
Q ss_pred cee---ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCC-CCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 742 YSV---ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGR-KALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 742 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
... .....+++.|+|||++.+..++.++||||||+++|||++|. +||..... ..... .... ..... .
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~---~~~~-~~~~~--~ 223 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITV---YLLQ-GRRLL--Q 223 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH---HHhc-CCCCC--C
Confidence 111 12335677899999998889999999999999999999965 55544322 11111 1111 11110 0
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
+.. ....+.+++.+||+.+|++||++.++++.|+++.
T Consensus 224 ~~~---------~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 PEY---------CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCc---------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 100 1235779999999999999999999999998764
No 260
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.1e-34 Score=305.79 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=203.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
.+|++.+.||+|+||.||+|... +|+ .||+|.+.... ......++.+|+.++++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 57888999999999999999653 333 58999887653 23445788999999999999999999999987 7889
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+++|+|.+++... ...+++..+..++.|+++|++|||+ ++|+||||||+||++++++.+||+|||+++
T Consensus 85 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 999999999999999652 2358999999999999999999998 899999999999999999999999999998
Q ss_pred cCCCCCceee-cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYSVE-TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.......... ....++..|+|||.+....++.++||||||+++||+++ |+.||......+ ... .... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~---~~~~-~~~~ 230 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPD---LLEK-GERL 230 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHH---HHhC-CCCC
Confidence 6654332211 12234568999999988889999999999999999999 999997653322 111 1111 1111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
+ .+.. ....+.+++.+|+..+|.+||++.++++.|+++..
T Consensus 231 ~--~~~~---------~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 P--QPPI---------CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred C--CCCC---------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 0111 11346789999999999999999999999988754
No 261
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.6e-34 Score=311.32 Aligned_cols=254 Identities=22% Similarity=0.383 Sum_probs=200.6
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||++... +++.||+|.+.... .......+.+|+.++++++||||+++++++......++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 46888999999999999999664 78999999887542 33445789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.... ....+++..+..++.|++.|+.|||+ +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 80 YMDAGSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred ecCCCCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 999999999886521 12468999999999999999999996 25999999999999999999999999999875533
Q ss_pred CCceeecccccccCcccccccCCC------CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATG------RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.. .....|++.|+|||++.+. .++.++|||||||++|||++|+.||........ ......... . .
T Consensus 156 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~--~-~ 226 (286)
T cd06622 156 SL---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI---FAQLSAIVD--G-D 226 (286)
T ss_pred Cc---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH---HHHHHHHhh--c-C
Confidence 21 2234688899999988544 357899999999999999999999975432211 111111111 1 1
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+..+.+ .....+.+++.+|++.+|++||++.+++.
T Consensus 227 ~~~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 PPTLPS---------GYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CCCCCc---------ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 111111 12245779999999999999999999986
No 262
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.7e-34 Score=303.60 Aligned_cols=249 Identities=27% Similarity=0.458 Sum_probs=201.2
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccC---CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM---GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
+|+..+.||+|+||.||+|... +++.||+|.+..... ..+..+.+.+|+++++.++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999665 789999998865432 233557899999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++.. ..++++..+..++.|+++|++|||+ .+|+|+||+|+||+++.++.+||+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKK-----YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 999999999999865 2458899999999999999999998 89999999999999999999999999998765
Q ss_pred CCCCceeecccccccCcccccccCCCC-CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGR-VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
.... ......|++.|+|||.+.... ++.++|+||||+++|+|++|+.||....+... .. .... ....+ .
T Consensus 153 ~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~--~~----~~~~-~~~~~-~ 222 (258)
T cd06632 153 VEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA--VF----KIGR-SKELP-P 222 (258)
T ss_pred cccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH--HH----HHHh-cccCC-C
Confidence 4332 223456889999999987766 89999999999999999999999976542111 11 1110 01111 1
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.+.. ...+.+++.+|++.+|++||++.++++
T Consensus 223 ~~~~~---------~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 IPDHL---------SDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cCCCc---------CHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11111 135678999999999999999999985
No 263
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.3e-34 Score=308.79 Aligned_cols=248 Identities=26% Similarity=0.466 Sum_probs=203.2
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
..|+..+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++||||+++++++.++...++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 4577889999999999999965 468899999887543 23456789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. .++++.++..++.|++.|++|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 83 YLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred cCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 9999999999854 458899999999999999999998 8999999999999999999999999999876544
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......++..|+|||++.+..++.++||||||+++|||++|+.||....+...... . .... + +
T Consensus 154 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-------~-~~~~-~----~ 219 (277)
T cd06640 154 TQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-------I-PKNN-P----P 219 (277)
T ss_pred Ccc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-------h-hcCC-C----C
Confidence 321 12334688899999999888899999999999999999999999976543221110 0 0110 0 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ........+.+++.+|++.+|++||++.++++
T Consensus 220 ~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 220 T-----LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred C-----CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 1 11223456789999999999999999999986
No 264
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.8e-35 Score=314.65 Aligned_cols=268 Identities=23% Similarity=0.367 Sum_probs=201.4
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46889999999999999999764 58999999987654444445678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.++... ...+++.++..++.|+++|++|||+ .+|+||||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999988887643 2348999999999999999999998 8999999999999999999999999999886544
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhh-HHHHHHHH-------Hhhcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRA-HLVTWFRR-------VLISK 810 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~-~~~~~~~~-------~~~~~ 810 (933)
.. .......++..|+|||++.+ ..++.++||||||+++|||++|++||......+.. ....+... .....
T Consensus 153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 153 PG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred Cc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 32 22233568899999998865 45788999999999999999999998754321111 11100000 00000
Q ss_pred CCCCcccCCCCCCCh----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 ENIPKAIDPNLNLDE----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
........+...... ........+.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000000000 00112356789999999999999999999986
No 265
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.1e-34 Score=304.14 Aligned_cols=253 Identities=26% Similarity=0.432 Sum_probs=204.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|++++++++||||+++++++..+...+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 6788999999999999999965 467899999987653 2356789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... ...+++.++..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 81 YCGGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred CCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999988652 1458899999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCC---CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATG---RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
... ......|+..|+|||.+... .++.++||||||+++|||++|+.||....+....... . ......
T Consensus 154 ~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~------~--~~~~~~- 223 (262)
T cd06613 154 TIA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI------S--KSNFPP- 223 (262)
T ss_pred hhh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------H--hccCCC-
Confidence 221 12335688899999998776 7899999999999999999999999765433221110 0 110000
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.+. ........+.+++.+|++.+|.+||++.+++.
T Consensus 224 --~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 224 --PKLK---DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --cccc---chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0011 11223456889999999999999999999975
No 266
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7e-34 Score=310.29 Aligned_cols=258 Identities=26% Similarity=0.463 Sum_probs=201.4
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
++|+..+.||+|+||.||+|.. .+|+ .||+|.+.... ......++.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 5678889999999999999965 3444 57888876543 233345789999999999999999999998754 467
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+++||+++|+|.+++... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eeehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccc
Confidence 899999999999998652 2358899999999999999999998 899999999999999999999999999998
Q ss_pred cCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 736 NAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 736 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ...+. ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~~~ 230 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLL----EKGERL 230 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HCCCCC
Confidence 65433221 1122345778999999988889999999999999999997 889987543222 11211 111111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhh
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQ 865 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 865 (933)
+. .+. ....+.+++..|+..+|++||+++++++.|+.+.+.
T Consensus 231 ~~--~~~---------~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 PQ--PPI---------CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CC--CCC---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 10 000 123567899999999999999999999999887544
No 267
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.2e-34 Score=302.45 Aligned_cols=250 Identities=22% Similarity=0.368 Sum_probs=203.6
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|+..+.||+|+||.||++.. .+++.+|+|++............+.+|++++++++||||+++++.+..+...++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 578899999999999999854 5788999999987665666678899999999999999999999999989999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEEecccccccCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVKNAPD 739 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~ 739 (933)
+++++|.+++.... ...+++..+..++.++++|++|||+ ++|+||||||+||++++++ .+||+|||++.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 81 APGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred CCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 99999999996522 2458999999999999999999998 8999999999999998654 689999999886654
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||........ . ....... .. .+..
T Consensus 155 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~---~~~~~~~--~~-~~~~ 223 (256)
T cd08220 155 KSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL---V---LKIMSGT--FA-PISD 223 (256)
T ss_pred Ccc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH---H---HHHHhcC--CC-CCCC
Confidence 321 2234688999999999888899999999999999999999999976533211 1 1111111 11 1111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ....+.+++.+|++.+|++||++.|+++
T Consensus 224 ~---------~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 R---------YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred C---------cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 1235779999999999999999999986
No 268
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-33 Score=302.81 Aligned_cols=253 Identities=26% Similarity=0.436 Sum_probs=203.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+++.||+|.++.........+.+.+|+.+++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 588899999999999999965 4789999999987654445678899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.. ...+++..+..++.++++|++|||+ .+|+|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 81 CSGGTLEELLEH-----GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred CCCCcHHHHHhh-----cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 999999999865 2357899999999999999999998 89999999999999999999999999998866543
Q ss_pred Cceeec---ccccccCcccccccCCCC---CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 741 KYSVET---RLAGTFGYLAPEYAATGR---VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 741 ~~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
...... ...+++.|+|||++.+.. ++.++||||||+++||+++|+.||........ . ...... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~---~~~~~~---~~~ 224 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--I---MFHVGA---GHK 224 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--H---HHHHhc---CCC
Confidence 322211 346788999999997766 88999999999999999999999975432111 1 111111 111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+.... .....+.+++.+|++.+|++||++.+++.
T Consensus 225 ~~~~~~~-------~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPIPDSL-------QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCccc-------ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111111 11234678999999999999999999875
No 269
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.8e-34 Score=310.49 Aligned_cols=246 Identities=29% Similarity=0.416 Sum_probs=201.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 4688999999999999999955 4689999999876432 2334577899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||+|+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 81 EYVPGGELFSHLRK-----SGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 99999999999865 2568999999999999999999999 899999999999999999999999999988665
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.. .....|++.|+|||.+.+...+.++||||||+++|+|++|+.||....... . ..........++..+
T Consensus 153 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~~~~~~~~~~~~~- 221 (290)
T cd05580 153 GR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---I---YEKILEGKVRFPSFF- 221 (290)
T ss_pred CC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHhcCCccCCccC-
Confidence 43 233468999999999988888999999999999999999999997643211 1 111111111111111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...+.+++.+|++.+|.+|| +++|+++
T Consensus 222 ------------~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 222 ------------SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ------------CHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 23567999999999999999 6666654
No 270
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.7e-34 Score=302.81 Aligned_cols=247 Identities=32% Similarity=0.489 Sum_probs=198.0
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
++|++.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.+++.++||||+++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4688999999999999999975 68889999986542 246789999999999999999999998654 47899999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ....+++.++..++.|+++|++|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 80 MSKGNLVNFLRTR---GRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred CCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 9999999999652 22458899999999999999999998 89999999999999999999999999998754332
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
. .....+..|+|||++.++.++.++||||||+++|||++ |+.||......+. .. . .. ...... ...
T Consensus 154 ~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~~---~-~~-~~~~~~-~~~ 220 (254)
T cd05083 154 V----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---KE---C-VE-KGYRME-PPE 220 (254)
T ss_pred C----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---HH---H-Hh-CCCCCC-CCC
Confidence 1 12234578999999988899999999999999999997 9999876533221 11 1 11 111111 011
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
.....+.+++.+|++.+|++||+++++++.|++
T Consensus 221 ---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 ---------GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 112457799999999999999999999998753
No 271
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.1e-34 Score=309.67 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=201.1
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.|.+|++++++++||||+++++++..+...++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 36788999999999999999965 46899999998754 3445578999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ...+++.++..++.|++.|++|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 82 EFCDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 999999999998552 2468999999999999999999999 899999999999999999999999999887544
Q ss_pred CCCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.... ......|++.|+|||++. ...++.++||||||+++|||++|+.||........ . ..... ...
T Consensus 155 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~--~~~ 225 (280)
T cd06611 155 STLQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--L----LKILK--SEP 225 (280)
T ss_pred cccc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--H----HHHhc--CCC
Confidence 3221 123346899999999874 34567899999999999999999999976532211 1 11111 111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+. ++. .......+.+++.+|++.+|++||++.++++
T Consensus 226 ~~-~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 226 PT-LDQ-------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CC-cCC-------cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 11 100 0011235778999999999999999999976
No 272
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-35 Score=315.00 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=212.5
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
...|.+.+.||+|.|+.|..|. ..++..||+|.+.+........+.+.+|+++|..++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 4578899999999999999994 457999999999998777777777999999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+.+|.+.+++... +...+.++..++.|+.+|++|||+ +.|||||||++||||+.+..+||+|||++..+.
T Consensus 135 eya~~ge~~~yl~~~-----gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH-----GRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EeccCchhHHHHHhc-----ccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999763 334558889999999999999999 999999999999999999999999999998776
Q ss_pred CCCceeecccccccCcccccccCCCCC-CCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRV-TTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
.+. .....+|++.|+|||++.+..| ++++|+||+|+++|-|+.|..||++..-. ....+++..+..++..+
T Consensus 207 ~~~--~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk------~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 207 YGL--MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK------ELRPRVLRGKYRIPFYM 278 (596)
T ss_pred ccc--cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc------cccchheeeeeccccee
Confidence 432 3455799999999999998876 67999999999999999999999865322 11223344444555444
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.. ++.+++++++-.+|.+|++++++.+-
T Consensus 279 s~-------------dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 279 SC-------------DCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ec-------------hhHHHHHHhhccCccccCCHHHhhhh
Confidence 33 34589999999999999999998764
No 273
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=290.12 Aligned_cols=243 Identities=26% Similarity=0.412 Sum_probs=202.3
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.++|..+++||+|.||.|-.++ ...++.+|+|+++++.. ..++...-..|-++++..+||.+..+...++..++.++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4678889999999999999984 45799999999998754 334556677899999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||..||.|.-+|.+ ...+++...+-+-.+|+.||.|||+ ++||.||+|.+|.|+|.+|++||.|||+.+.-
T Consensus 247 MeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhc
Confidence 999999999988865 3568888899999999999999999 89999999999999999999999999998843
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
-... .....++|||.|.|||++....|..++|.|.+||++|||++|+.||.....+ .+ +.-++..+-..|..+
T Consensus 319 I~~g-~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---kL---FeLIl~ed~kFPr~l 391 (516)
T KOG0690|consen 319 IKYG-DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---KL---FELILMEDLKFPRTL 391 (516)
T ss_pred cccc-ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---HH---HHHHHhhhccCCccC
Confidence 3222 2345679999999999999999999999999999999999999999865322 12 222333344444443
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRP 850 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP 850 (933)
.+ +...++...+.+||.+|.
T Consensus 392 s~-------------eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 392 SP-------------EAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred CH-------------HHHHHHHHHhhcChHhhc
Confidence 32 345788899999999997
No 274
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.3e-34 Score=309.62 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=203.3
Q ss_pred cHHHHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEee
Q 002346 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCI 649 (933)
Q Consensus 572 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 649 (933)
..+++..+.++|++.+.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +|||++++++++.
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3455556678999999999999999999965 578899999986542 2235678899999999 8999999999987
Q ss_pred eC-----ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC
Q 002346 650 NG-----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724 (933)
Q Consensus 650 ~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~ 724 (933)
.. ...++||||+++++|.++++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEG 165 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCC
Confidence 53 357999999999999998865322 23568999999999999999999998 8999999999999999999
Q ss_pred cEEEecccccccCCCCCceeecccccccCcccccccCCC-----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHH
Q 002346 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATG-----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHL 799 (933)
Q Consensus 725 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~ 799 (933)
.+||+|||++......... .....|+..|+|||++... .++.++|||||||++|||++|+.||....+... +
T Consensus 166 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~ 242 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--L 242 (291)
T ss_pred CEEEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--H
Confidence 9999999998765433221 2234688999999987543 368899999999999999999999976432211 1
Q ss_pred HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 800 VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. .. ....+...++ ......+.+++.+|++.+|++||++.|+++
T Consensus 243 ~~----~~--~~~~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 FK----IP--RNPPPTLLHP--------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH----Hh--cCCCCCCCcc--------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 11 1111111111 112235789999999999999999999986
No 275
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.1e-34 Score=312.49 Aligned_cols=248 Identities=25% Similarity=0.410 Sum_probs=198.1
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
.|.....||+|+||.||++.. .++..||||++... .....+.+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 344456799999999999955 46889999998654 234456789999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.. ..+++.++..++.|++.|++|||+ ++|+||||||+||++++++.++|+|||++......
T Consensus 101 ~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 101 LEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence 999999998843 358899999999999999999999 89999999999999999999999999998754332
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. ......|++.|+|||+..+..++.++||||||+++|||++|+.||....+.... ..+.. ..+..+..
T Consensus 172 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~------~~~~~~~~- 240 (292)
T cd06658 172 VP-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM---RRIRD------NLPPRVKD- 240 (292)
T ss_pred cc-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHh------cCCCcccc-
Confidence 21 123356899999999998888999999999999999999999999764332211 11111 01111100
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+.+++.+|+..+|.+||+++++++
T Consensus 241 ------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 241 ------SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred ------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0011235678999999999999999999987
No 276
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.1e-34 Score=306.63 Aligned_cols=254 Identities=23% Similarity=0.413 Sum_probs=201.0
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCC----chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEE
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMG----NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 656 (933)
+|+..+.||+|+||.||+|. ..+++.||+|++...... ....+.+.+|++++++++|+||+++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47888999999999999995 467899999998754321 1235688999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEEecccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVK 735 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~ 735 (933)
||||+++++|.+++.+ ..++++..+..++.|++.|++|||+ ++++|+||||+||+++.++ .+||+|||.+.
T Consensus 81 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 81 FVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred EEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 9999999999999865 2468899999999999999999999 8999999999999998776 59999999987
Q ss_pred cCCCCCce---eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 736 NAPDGKYS---VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 736 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
........ ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||........... ...... . .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~-~-~ 227 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL---IFKIAS-A-T 227 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH---HHHHhc-c-C
Confidence 65432211 12234688999999999888899999999999999999999999975432221111 111110 0 0
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....++ ......+.+++.+|++.+|++||++.++++
T Consensus 228 ~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 TAPSIP---------EHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCc---------hhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 011111 112245778999999999999999999985
No 277
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5e-34 Score=308.73 Aligned_cols=264 Identities=24% Similarity=0.356 Sum_probs=199.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|+..+.||+|+||.||+|.. .+++.||||++............+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478899999999999999965 4689999999876544444456789999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+. ++|.+++... ....+++..+..++.|+++|++|||+ .+++||||+|+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 81 LH-QDLKKFMDAS---PLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred cc-cCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 95 6898888542 23568999999999999999999998 89999999999999999999999999998755432
Q ss_pred CceeecccccccCcccccccCCCC-CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc---------
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGR-VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--------- 810 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 810 (933)
.. ......+++.|+|||++.+.. ++.++||||||+++|||+||+.||......+ .....+.......
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 154 VR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred cc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhH
Confidence 21 122335788999999886544 5889999999999999999999997543221 1111111100000
Q ss_pred -----CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 -----ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 -----~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+......+ .........++.+++.+|++.||++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDF--SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCH--HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000000 0000011234678999999999999999999985
No 278
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.4e-34 Score=308.26 Aligned_cols=240 Identities=21% Similarity=0.395 Sum_probs=187.9
Q ss_pred CccccCCCeEEEEEEeCC--------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 587 NILGRGGFGVVYGGELPD--------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+.||+|+||.||+|.... ...||+|.+... .....+.+..|+.+++.++||||+++++++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 469999999999995432 335888887644 2334567889999999999999999999999989999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc--------EEEec
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR--------AKVAD 730 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~--------~kl~D 730 (933)
||+++|+|.++++.. ...+++..+..++.|++.|++|||+ ++|+||||||+||+++.++. ++++|
T Consensus 79 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 79 EYVKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred ecCCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecc
Confidence 999999999999652 1358899999999999999999998 89999999999999987765 69999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCC-CCCCCCCCchhhHHHHHHHHHhh
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGR-KALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~-~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
||++...... ....++..|+|||++.+ ..++.++||||||+++|||++|. .|+....+.... . ...
T Consensus 152 ~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~---~----~~~ 219 (258)
T cd05078 152 PGISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL---Q----FYE 219 (258)
T ss_pred cccccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH---H----HHH
Confidence 9988654432 23467889999999976 45789999999999999999995 555433221111 1 111
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
....++.. ...++.+++.+|++.+|++||+++++++.|+
T Consensus 220 ~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAP-------------KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCC-------------CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111111 1135779999999999999999999998763
No 279
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.1e-34 Score=306.03 Aligned_cols=252 Identities=30% Similarity=0.512 Sum_probs=197.4
Q ss_pred CccccCCCeEEEEEEeCC-------CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 587 NILGRGGFGVVYGGELPD-------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+.||+|+||.||+|...+ ++.||+|.+.... ......++.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 369999999999996532 2579999886542 23446789999999999999999999999999899999999
Q ss_pred ecCCCChhhHhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-----cEEEeccc
Q 002346 660 YMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-----RAKVADFG 732 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-----~~kl~DfG 732 (933)
|+++++|.+++...... ....+++.++..++.|+++|++|||+ .+++|+||||+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 99999999999753221 12347899999999999999999998 8999999999999999887 89999999
Q ss_pred ccccCCCCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
+++........ ......++..|+|||++.++.++.++||||||+++|||++ |+.||...... .....+ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~----~~~ 229 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHV----TAG 229 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHH----hcC
Confidence 98755433221 1223356788999999999999999999999999999998 99998654321 111111 111
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
... . .. ......+.+++.+|++.+|++||++.++++.|+
T Consensus 230 ~~~-~-~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 GRL-Q-KP---------ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred Ccc-C-Cc---------ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 100 0 00 112245779999999999999999999999875
No 280
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-35 Score=282.30 Aligned_cols=248 Identities=25% Similarity=0.407 Sum_probs=195.8
Q ss_pred cCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEEeecC
Q 002346 585 EANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
.+..||.|+-|.||+++. ..|...|||.+.... ..++.+++.+.+.++...+ +|+||+.+|||..+...++.||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 356699999999999965 458899999998875 4455678888888877774 9999999999999999999999983
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
.-++..+++ ..+++++..+-++...++.||.||.+ +++|+|||+||+|||+|+.|.+|+||||++....+..
T Consensus 175 -~C~ekLlkr----ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk- 246 (391)
T KOG0983|consen 175 -TCAEKLLKR----IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK- 246 (391)
T ss_pred -HHHHHHHHH----hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccc-
Confidence 233334433 23679999999999999999999998 5999999999999999999999999999997665533
Q ss_pred eeecccccccCcccccccCC---CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 743 SVETRLAGTFGYLAPEYAAT---GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
..+..+|.+.|||||.+.- ..|+-++||||||++++||.||+.||.....+= +...+++. ..+..++.
T Consensus 247 -AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-----e~ltkvln---~ePP~L~~ 317 (391)
T KOG0983|consen 247 -AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-----EVLTKVLN---EEPPLLPG 317 (391)
T ss_pred -ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-----HHHHHHHh---cCCCCCCc
Confidence 3456789999999999854 368889999999999999999999998743221 11222222 11222222
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.-. ....+.+++..|+++|+.+||.+.++++
T Consensus 318 ~~g-------FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 HMG-------FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ccC-------cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 211 2245789999999999999999999986
No 281
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.7e-34 Score=314.23 Aligned_cols=198 Identities=26% Similarity=0.403 Sum_probs=161.0
Q ss_pred CCccccCCCeEEEEEEeC---CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--CceeEEEEee
Q 002346 586 ANILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEY 660 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 660 (933)
..+||+|+||.||+|... ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 367999999999999754 457899998875432 2467899999999999999999998854 4577899999
Q ss_pred cCCCChhhHhhhccc----CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe----cCCCcEEEeccc
Q 002346 661 MPRGTLAQHLFEWHD----HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDMRAKVADFG 732 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill----~~~~~~kl~DfG 732 (933)
++ ++|.+++..... .....+++..++.++.|+++||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 86 588887753211 112358899999999999999999998 899999999999999 566789999999
Q ss_pred ccccCCCCCce--eecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCC
Q 002346 733 LVKNAPDGKYS--VETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDT 791 (933)
Q Consensus 733 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~ 791 (933)
+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+||++||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99865443211 1234578999999999876 45799999999999999999999999754
No 282
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=317.30 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=203.9
Q ss_pred cCCccccCCCeEEEEEEe-CCCc----EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 585 EANILGRGGFGVVYGGEL-PDGT----KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
..++||+|+||+||||.+ +.|+ +||+|++.... ..+...++.+|+-+|.+++|||+++++|+|.... ..||++
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 468899999999999954 4444 68999887653 4556789999999999999999999999998766 789999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||+.|+|.+|++.++ ..+.....+.+..|||+|+.|||. +++|||||.++|||+.+-..+||.|||+++....
T Consensus 778 ~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred hcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 999999999997733 457888999999999999999998 8999999999999999999999999999997665
Q ss_pred CCceee-cccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 740 GKYSVE-TRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 740 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
+..... ....-.+.|||-|.+....|+.++|||||||++||++| |..|++....++..++ +...+.++.
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-------le~geRLsq-- 921 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-------LEKGERLSQ-- 921 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-------HhccccCCC--
Confidence 443222 22233568999999999999999999999999999999 9999987654443322 222222221
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
|. -....+..++.+||..|++.||+++++...+.+..
T Consensus 922 -Pp--------iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 -PP--------ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred -CC--------CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 11 11234668889999999999999999998886653
No 283
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.4e-34 Score=304.67 Aligned_cols=237 Identities=24% Similarity=0.469 Sum_probs=188.3
Q ss_pred CccccCCCeEEEEEEeCCCc-----------EEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 587 NILGRGGFGVVYGGELPDGT-----------KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
+.||+|+||.||+|...+.. .|++|.+..... ....|.+|+.+++.++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 46999999999999765432 578887765421 15789999999999999999999999988 7789
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-------cEEE
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-------RAKV 728 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-------~~kl 728 (933)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++ .+||
T Consensus 77 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred EEEEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEe
Confidence 9999999999999996521 268999999999999999999998 8999999999999999888 7999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCCC--CCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHH
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATG--RVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~ 805 (933)
+|||++..... .....++..|+|||++... .++.++||||||+++|||++ |..||......... .+..
T Consensus 150 ~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~---~~~~- 220 (259)
T cd05037 150 SDPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE---RFYQ- 220 (259)
T ss_pred CCCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH---HHHh-
Confidence 99999886543 1223567889999998776 78999999999999999999 56777654322111 1111
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.....+. +. ...+.+++.+|+..+|.+||++.++++.|
T Consensus 221 ---~~~~~~~---~~----------~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 ---DQHRLPM---PD----------CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ---cCCCCCC---CC----------chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111110 00 04678999999999999999999999876
No 284
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4e-34 Score=307.41 Aligned_cols=255 Identities=24% Similarity=0.435 Sum_probs=198.5
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC--------chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG--------NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 652 (933)
+|.+.+.||+|+||.||+|.. .+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999954 47899999988643211 112356888999999999999999999999999
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||+ .+++||||+|+||+++.++.++++|||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecc
Confidence 999999999999999999652 468999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCCce-eecccccccCcccccccCCCC--CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 733 LVKNAPDGKYS-VETRLAGTFGYLAPEYAATGR--VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 733 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
+++........ ......|+..|+|||++.... ++.++||||||+++||+++|+.||........ ... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~----~~-- 225 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFK----LG-- 225 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHH----hh--
Confidence 98755432211 123346889999999987654 78999999999999999999999964322111 111 00
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......++... .......+.+++.+|++.+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 226 NKRSAPPIPPDV-----SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccccCCcCCccc-----cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 011111111111 1112346789999999999999999999986
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7e-34 Score=307.24 Aligned_cols=258 Identities=24% Similarity=0.405 Sum_probs=200.8
Q ss_pred HHHHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee
Q 002346 573 IEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (933)
Q Consensus 573 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 650 (933)
...+....+.|++.+.||+|+||.||+|.. .+++.||+|++... .....++..|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 344445668899999999999999999965 56889999988654 23446788999999999 69999999999853
Q ss_pred ------CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC
Q 002346 651 ------GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724 (933)
Q Consensus 651 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~ 724 (933)
....++||||+++|+|.+++.... ...+++..+..++.|+++|++|||+ .+|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCC
Confidence 457799999999999999986522 2457888999999999999999999 8999999999999999999
Q ss_pred cEEEecccccccCCCCCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHH
Q 002346 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHL 799 (933)
Q Consensus 725 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~ 799 (933)
.++|+|||++........ ......|++.|+|||.+. ...++.++|||||||++|||++|+.||....+......
T Consensus 159 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 999999999875432211 123356899999999875 34678899999999999999999999976433221110
Q ss_pred HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 800 VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. ....+. .. .......+.+++.+||+.+|.+||++.|+++
T Consensus 238 ------~~--~~~~~~-----~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 ------IP--RNPPPK-----LK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------Hh--hCCCCC-----Cc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 000011 11 0112246789999999999999999999975
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-33 Score=300.49 Aligned_cols=252 Identities=31% Similarity=0.550 Sum_probs=200.6
Q ss_pred CccCCccccCCCeEEEEEEeCC-----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 583 FSEANILGRGGFGVVYGGELPD-----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
+++.+.||+|+||.||++...+ +..||+|++.... .....+.+..|+.++..++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 3567899999999999996643 4889999987653 223567899999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++..... ..+++.++..++.|++.|++|||+ .+++||||||+||++++++.++|+|||++...
T Consensus 80 ~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EeccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceec
Confidence 999999999999965221 128999999999999999999998 89999999999999999999999999999866
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
............+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ...... .. . ....
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~---~~-~-~~~~- 224 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEYL---KK-G-YRLP- 224 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH---hc-C-CCCC-
Confidence 6543322222347889999999988889999999999999999998 77887653221 111111 11 1 1110
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
... ....++.+++.+|+..+|++||++.|+++.|
T Consensus 225 ~~~---------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 KPE---------NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCC---------cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 1234678899999999999999999998753
No 287
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-33 Score=304.46 Aligned_cols=248 Identities=25% Similarity=0.462 Sum_probs=200.2
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC---CCcceeEEeEeeeCceeEEE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR---HRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 657 (933)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ......++.+|+.++++++ |||++++++++..+...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 477889999999999999964 578999999987643 3344577899999999996 99999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++.. .++++..++.++.|+++|++|||+ .+|+||||+|+||++++++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 81 MEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999854 368999999999999999999998 89999999999999999999999999998866
Q ss_pred CCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
..... ......|+..|+|||++.++ .++.++||||||+++|+|++|+.||........ ... . ...
T Consensus 152 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~~-~-~~~----- 217 (277)
T cd06917 152 NQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MML-I-PKS----- 217 (277)
T ss_pred CCCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hhc-c-ccC-----
Confidence 54332 22334789999999988654 468899999999999999999999976432111 100 0 010
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+.+.... ....+.+++.+|++.+|++||++.++++
T Consensus 218 ~~~~~~~~~----~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 KPPRLEDNG----YSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCCccc----CCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 111111110 2246789999999999999999999986
No 288
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=8.1e-34 Score=309.38 Aligned_cols=265 Identities=25% Similarity=0.334 Sum_probs=200.0
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC---chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
+|+..+.||+|+||.||+|.. .+++.||+|++...... ......+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477889999999999999965 46899999999866433 22345678899999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+ +++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.++|+|||+++..
T Consensus 81 ~e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 81 FEFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred Eccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 9999 89999999651 1368999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-------
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS------- 809 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------- 809 (933)
..... ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||....+.+. +..........
T Consensus 153 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 153 GSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ--LGKIFEALGTPTEENWPG 229 (298)
T ss_pred cCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH--HHHHHHHcCCCchhhhhh
Confidence 54321 1223356788999998854 4678999999999999999999887765433221 11111110000
Q ss_pred cCCCCcccC----CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPKAID----PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~d----~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....+.... +..............+.+++.+|++.+|++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000 000000011122356789999999999999999999987
No 289
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-33 Score=309.17 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=200.5
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||++.. ..++.||+|.+..... .....+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688899999999999999955 4678999999876532 2234567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++.. ...+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 81 EYVEGGDCATLLKN-----IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 99999999999955 2468999999999999999999998 899999999999999999999999999886321
Q ss_pred CCC--------------ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002346 739 DGK--------------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 739 ~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~ 804 (933)
... ........|+..|+|||++....++.++||||||+++|||++|+.||....+.. ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~------~~~ 226 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFG 226 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH
Confidence 100 001112457889999999988889999999999999999999999997543221 111
Q ss_pred HHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 805 RVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.........+.. +. .....+.+++.+|++.+|++||++.++.+.|+
T Consensus 227 ~~~~~~~~~~~~-~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 227 QVISDDIEWPEG-DE---------ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHhcccCCCCc-cc---------cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 111111111110 00 11235679999999999999999766666554
No 290
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-33 Score=304.67 Aligned_cols=260 Identities=23% Similarity=0.333 Sum_probs=202.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 657 (933)
++|...+.||.|++|.||++.. .+++.||+|.+.... ......++.+|++++++++||||+++++++... ...++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 4678889999999999999966 468899999987653 234457799999999999999999999998653 467999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++..... ....+++..+..++.|+++||+|||+ .+++|+||+|+||+++.++.++|+|||++...
T Consensus 80 ~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999998765322 23568899999999999999999998 89999999999999999999999999998754
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCC--chhhHHHHHHHHHhhccCCCCc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMP--DDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ........+.... ....++.
T Consensus 156 ~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 230 (287)
T cd06621 156 VNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM--PNPELKD 230 (287)
T ss_pred cccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC--Cchhhcc
Confidence 4322 1234678899999999988999999999999999999999999986532 1112222221110 0111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... .......+.+++.+|++.+|++||++.|+++
T Consensus 231 ~~~~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 231 EPGN-------GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCC-------CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1100 0112346789999999999999999999987
No 291
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-33 Score=309.90 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=201.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|... +++.||+|.+....... ...+.+..|+++++.++|+||+++++.+..+...++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999654 58999999998764332 35567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+.+++|.+++... ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQ---PGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhC---CCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 999999999998642 12568999999999999999999998 899999999999999999999999999987543
Q ss_pred CCCce----------------------------eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCC
Q 002346 739 DGKYS----------------------------VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDD 790 (933)
Q Consensus 739 ~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~ 790 (933)
..... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence 22110 01124688999999999988899999999999999999999999975
Q ss_pred CCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 002346 791 TMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD----MGHAVN 857 (933)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs----~~evl~ 857 (933)
...... . ..........+.. ......+.+++.+|++.+|++||+ +.++++
T Consensus 235 ~~~~~~--~----~~~~~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 235 SNRDET--F----SNILKKEVTFPGS-----------PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CchHHH--H----HHHhcCCccCCCc-----------cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 432211 1 1111111111110 012346789999999999999999 555554
No 292
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.2e-34 Score=308.08 Aligned_cols=249 Identities=24% Similarity=0.412 Sum_probs=201.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|.+.+.||+|+||.||++.. .++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 6788999999999999999954 468899999986542 3335678999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ..+++.++..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 97 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred cCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999854 347899999999999999999998 8999999999999999999999999998875544
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|++.|+|||++....++.++||||||+++||+++|+.||....+...... .. ....+
T Consensus 168 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~--~~~~~----- 233 (293)
T cd06647 168 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IA--TNGTP----- 233 (293)
T ss_pred ccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hh--cCCCC-----
Confidence 322 12334688999999999888899999999999999999999999976433211100 00 00000
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+. ........+.+++.+||+.+|++||++.+++.
T Consensus 234 ~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 234 ELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 01112235779999999999999999999986
No 293
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.3e-34 Score=310.77 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=197.0
Q ss_pred ccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 584 SEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
.....||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 3445799999999999954 478999999986542 2335678899999999999999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+++|.+++.. ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 102 ~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 102 GGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 9999988744 458899999999999999999998 8999999999999999999999999999875443221
Q ss_pred eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLN 822 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 822 (933)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....+... ...... ....... ...
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~~~~---~~~~~~~-~~~--- 241 (297)
T cd06659 173 -KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA---MKRLRD---SPPPKLK-NAH--- 241 (297)
T ss_pred -cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHhc---cCCCCcc-ccC---
Confidence 12335689999999999888899999999999999999999999975433221 111110 0000000 000
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 823 LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 823 ~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|++.+|++||++.++++
T Consensus 242 ------~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 242 ------KISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred ------CCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 11234678999999999999999999987
No 294
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-33 Score=300.93 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=195.9
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC---chhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--cee
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 654 (933)
.+|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788999999999999999965 46899999988643221 23456789999999999999999999988763 467
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++
T Consensus 82 ~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS-----YGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 899999999999999865 2457889999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCc--eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGKY--SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
........ .......|+..|+|||++.+..++.++||||||+++|||++|+.||........ +..... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~-~~- 225 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIAT-QP- 225 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHHhc-CC-
Confidence 75432111 112234688999999999888899999999999999999999999975422111 111111 10
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .+.. +......+.+++.+|+. +|++||+++++++
T Consensus 226 ~----~~~~-----~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 T----NPVL-----PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C----CCCC-----chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 0111 11222456788888984 9999999999986
No 295
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.4e-33 Score=305.01 Aligned_cols=253 Identities=27% Similarity=0.409 Sum_probs=194.7
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHH-HHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAV-LTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|.. .+|+.||+|+++....... ..++..|+.. ++..+||||+++++++..+...++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 4788999999999999999965 4699999999876543322 3455556665 66678999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCC-CeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
||++ |+|.+++...... ...+++..++.++.|++.|++|||+ + +++||||||+||+++.++.+||+|||++...
T Consensus 80 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9996 7898888653322 2568999999999999999999998 5 9999999999999999999999999998765
Q ss_pred CCCCceeecccccccCcccccccCC----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCC
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAAT----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENI 813 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (933)
.... ......|+..|+|||.+.+ ..++.++|+||||+++|||++|+.||...... ...+ ..... ...
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~----~~~~~--~~~ 225 (283)
T cd06617 155 VDSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQL----KQVVE--EPS 225 (283)
T ss_pred cccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHH----HHHHh--cCC
Confidence 4321 1233468899999998864 45688999999999999999999999653221 1111 11111 111
Q ss_pred CcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+...... ...++.+++.+|++.+|++||++.++++
T Consensus 226 ~~~~~~~---------~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 PQLPAEK---------FSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCccc---------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110011 1245789999999999999999999986
No 296
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.6e-34 Score=285.66 Aligned_cols=273 Identities=23% Similarity=0.307 Sum_probs=203.1
Q ss_pred cCCccCCccccCCCeEEEEEEeC---C--CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee-Ccee
Q 002346 581 DNFSEANILGRGGFGVVYGGELP---D--GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 654 (933)
..|+....||+|+||.||+|... + ...+|+|+++.+...........+|+.+++.++||||+.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 46889999999999999999332 2 2378999998774333334567899999999999999999998877 7788
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC----CcEEEec
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD----MRAKVAD 730 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~----~~~kl~D 730 (933)
++++||.+. +|...++.++......++...+..|+.||+.|+.|||+ +-|+|||+||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence 999999975 89999887666666789999999999999999999999 889999999999999877 8999999
Q ss_pred ccccccCCCCCcee--ecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCc---hhhHHHHHHH
Q 002346 731 FGLVKNAPDGKYSV--ETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPD---DRAHLVTWFR 804 (933)
Q Consensus 731 fGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~---~~~~~~~~~~ 804 (933)
||+++.+.+.-... ...++-|..|.|||.+.+. .|+.+.|||+.||++.||+|-.+-|.+.... ......+...
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999776543222 2446779999999998765 6899999999999999999999888653221 0011122222
Q ss_pred HHhhccCCCCcccCCCCCCChhh-----------------HHH-------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 805 RVLISKENIPKAIDPNLNLDEET-----------------IES-------IYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 805 ~~~~~~~~~~~~~d~~l~~~~~~-----------------~~~-------~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+++.--+...+...|.+..-.+. ... .....+++.++++.||.+|.|+.++++
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 22221111111111111100000 000 011468999999999999999999987
No 297
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9.2e-34 Score=307.76 Aligned_cols=266 Identities=23% Similarity=0.306 Sum_probs=197.0
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+++|.+.+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.+++.++|+||+++++++..+...++||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 46899999999999999999954 5689999999876532 233346788999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+. +++.+++... ...+.+..+..++.|+++||+|||+ .+|+|+||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 83 EYMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred eccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 9995 7887777441 1347788899999999999999998 899999999999999999999999999987543
Q ss_pred CCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh---------
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI--------- 808 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~--------- 808 (933)
..... .....+++.|+|||++.+. .++.++||||||+++|||++|+.||+...+... .+.. ......
T Consensus 155 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 231 (291)
T cd07870 155 IPSQT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE-QLEK-IWTVLGVPTEDTWPG 231 (291)
T ss_pred CCCCC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHH-HHHHcCCCChhhhhh
Confidence 32211 1233578999999998654 578899999999999999999999976543211 1111 000000
Q ss_pred --c-cCCCCcccC----CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 809 --S-KENIPKAID----PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 809 --~-~~~~~~~~d----~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ....++... ..+............+.+++.+|++.||++|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 000000000 000000000111345678999999999999999999875
No 298
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-33 Score=302.15 Aligned_cols=248 Identities=25% Similarity=0.458 Sum_probs=201.3
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|+.++++++||||+++++++..+...++|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 3467788999999999999954 578999999886543 23445789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.. ..+++..+..++.|++.|++|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 83 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence 9999999999854 458899999999999999999998 8999999999999999999999999999876543
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....+... ..... ... ...++.
T Consensus 154 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~--~~~-~~~~~~ 223 (277)
T cd06641 154 TQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV------LFLIP--KNN-PPTLEG 223 (277)
T ss_pred chh-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH------HHHHh--cCC-CCCCCc
Confidence 221 12234688899999999888899999999999999999999999975432111 11111 111 111111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ....+.+++.+|++.+|.+||++.++++
T Consensus 224 ~---------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 N---------YSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred c---------cCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1 1245778999999999999999999987
No 299
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.4e-34 Score=305.15 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=204.0
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|+..+.||+|+||.||++... +++.||+|++..... ....+++.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 36778899999999999999664 689999999876542 3456788999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++.... .++++..+..++.|+++|++|||+ ..+++||||||+||++++++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 80 YMDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred ecCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 999999999986521 568899999999999999999997 36999999999999999999999999999875533
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ....|+..|+|||++.+..++.++||||||+++|+|++|+.||...... ............... . +
T Consensus 154 ~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~--~-----~ 222 (265)
T cd06605 154 SLA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIVNEP--P-----P 222 (265)
T ss_pred HHh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHhcCC--C-----C
Confidence 211 1257889999999998889999999999999999999999999754321 111222222222111 0 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+... .....+.+++.+|+..+|++||++.+++.
T Consensus 223 ~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 RLPSG----KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCChh----hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 11100 02345779999999999999999999986
No 300
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=343.47 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=208.9
Q ss_pred HHHHHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce
Q 002346 575 VLRQVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (933)
Q Consensus 575 ~l~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 653 (933)
.+..++-+|+-...||.|.||.||.| ...+|+-.|+|.+.......+..+...+|+.++..++|||+|+.+|+-.+++.
T Consensus 1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence 35566778889999999999999998 66789999999987766556667788999999999999999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.+|.||||++|+|.+.+.. .+-.++.....+..|++.|++|||+ +|||||||||.||+++.+|.+|++|||.
T Consensus 1309 v~IFMEyC~~GsLa~ll~~-----gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEH-----GRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHHhccCcHHHHHHh-----cchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccc
Confidence 9999999999999999965 2345666777788999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceee---cccccccCcccccccCCCC---CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 734 VKNAPDGKYSVE---TRLAGTFGYLAPEYAATGR---VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 734 a~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|........... ...+||+.|||||++.+.. -..++||||+|||+.||+||++||..... .|.....
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~ 1453 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYH 1453 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhH
Confidence 987665432222 3468999999999996543 45789999999999999999999986532 1332222
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+..|.. + .....+-.+++.+|++.||++|-++.|+++
T Consensus 1454 V~~gh~Pq~-----P-----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 VAAGHKPQI-----P-----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhccCCCCC-----c-----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 223332221 1 112234568999999999999988887765
No 301
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.6e-34 Score=305.13 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=203.0
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
+|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788999999999999999664 68999999997654322 456789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+.+++|.+++... .++++.++..++.|+++||+|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999999651 468999999999999999999998 8999999999999999999999999999876554
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.. ......|+..|+|||++.+..++.++|+||||+++|+|++|+.||............ ..... ....+.+
T Consensus 153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~---~~~~~~~ 223 (258)
T cd05578 153 DT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----AKQET---ADVLYPA 223 (258)
T ss_pred Cc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH----HHhcc---ccccCcc
Confidence 32 123356888999999998888999999999999999999999999865432121111 11110 1111111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDM--GHAV 856 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~--~evl 856 (933)
.. ...+.+++.+|++.+|.+||++ +|++
T Consensus 224 ~~---------~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 224 TW---------STEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cC---------cHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11 2467799999999999999999 6654
No 302
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.2e-33 Score=304.10 Aligned_cols=255 Identities=25% Similarity=0.395 Sum_probs=200.4
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCc----
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS---- 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~---- 652 (933)
.+++|++.+.||+|+||.||+|.. .+++.|++|++.... ...+++.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468899999999999999999966 467899999987652 2346799999999999 7999999999997644
Q ss_pred --eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 653 --ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 653 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
..++||||+++++|.+++..... ....+++..+..++.|+++||+|||+ .+++||||+|+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECC
Confidence 48999999999999999865321 13568999999999999999999998 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCC-----CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHH
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-----GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~ 805 (933)
||++....... .......|++.|+|||++.. ..++.++||||||+++|||++|+.||....+... .. .
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~----~ 229 (275)
T cd06608 157 FGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LF----K 229 (275)
T ss_pred Cccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HH----H
Confidence 99987554322 12233568999999998753 3467899999999999999999999975432211 11 1
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. ....+ .+. ........+.+++.+|++.||++||++.++++
T Consensus 230 ~~--~~~~~-----~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IP--RNPPP-----TLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hh--ccCCC-----CCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 11111 111 11123346789999999999999999999986
No 303
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=289.31 Aligned_cols=256 Identities=24% Similarity=0.370 Sum_probs=201.2
Q ss_pred ccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeec
Q 002346 584 SEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
+....||.|+||+|+|. ..+.|+..|||+++.... ..+.+++..|.+...+- ++||||++||.+..++..|+.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 34567999999999998 556799999999988753 45667888888875554 7999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
..+|+.+.+.........+++...-+|...++.||.||.. ...||||||||+|||++..|.+||||||++....+.
T Consensus 146 -d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S- 221 (361)
T KOG1006|consen 146 -DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS- 221 (361)
T ss_pred -hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHH-
Confidence 4677665543222233568899999999999999999998 489999999999999999999999999998755442
Q ss_pred ceeecccccccCcccccccCCC--CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 742 YSVETRLAGTFGYLAPEYAATG--RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
...+.-+|...|||||.+... .|+-++||||||++|||+.||+.|+..-. ...+.+..+.... .+
T Consensus 222 -iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gd--pp----- 288 (361)
T KOG1006|consen 222 -IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGD--PP----- 288 (361)
T ss_pred -HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCC--CC-----
Confidence 223445799999999998543 48889999999999999999999997532 1233333333222 22
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+..+..+.+....+..+|.-|+.+|-.+||.+.++.+
T Consensus 289 ~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 289 ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 22223444555667889999999999999999999876
No 304
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.1e-34 Score=307.85 Aligned_cols=265 Identities=24% Similarity=0.359 Sum_probs=196.5
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|+||.||+|... +++.||+|.+..... ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 67889999999999999999654 689999999876432 2223457789999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++ ++|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 84 YLD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred cCC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 997 4999988652 1358899999999999999999998 8999999999999999999999999999875432
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--cCCCCc-
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS--KENIPK- 815 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 815 (933)
.... .....++..|+|||++.+ ..++.++||||+|+++|||++|+.||........ ....+...... ....+.
T Consensus 156 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 156 PSKT-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED--QLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred CCcc-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHhcCCCChhhhhhh
Confidence 2111 122356889999998865 4578999999999999999999999975432111 11111110000 000000
Q ss_pred -----ccC---CCCCCCh-----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 -----AID---PNLNLDE-----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 -----~~d---~~l~~~~-----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
... +...... ........+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 0000000 00111245679999999999999999999875
No 305
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-33 Score=300.87 Aligned_cols=251 Identities=22% Similarity=0.384 Sum_probs=202.6
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||+|.. .+|..||+|.+..........+.+.+|+.+++.++|+||+++++++..+...++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 578889999999999999965 4688999999877644445567889999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEEecccccccCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVKNAPD 739 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~ 739 (933)
+++++|.+++... ....+++..+..++.|+++|++|||+ .+++|+||||+||++++++ .+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 81 CDGGDLMKRINRQ---RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 9999999998652 12357999999999999999999998 8999999999999999886 469999999876544
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
... ......|++.|+|||+..+..++.++||||||+++|||++|+.||...... .+...... ..... +.+
T Consensus 155 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~--~~~~~-~~~ 224 (257)
T cd08225 155 SME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLKICQ--GYFAP-ISP 224 (257)
T ss_pred Ccc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHhc--ccCCC-CCC
Confidence 322 122346899999999998888999999999999999999999999754321 11111111 11111 111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. ...+.+++.+|++.+|++||++.++++
T Consensus 225 ~~---------~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 225 NF---------SRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CC---------CHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11 135779999999999999999999986
No 306
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-34 Score=332.15 Aligned_cols=255 Identities=28% Similarity=0.467 Sum_probs=193.6
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee------
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN------ 650 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 650 (933)
+...+|+..++||+||||.|||++.+ ||+.||||++.... +........+|+..+++|+|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45567888899999999999999543 89999999999876 66777889999999999999999998741100
Q ss_pred ------------------------------------------------------------------------C-------
Q 002346 651 ------------------------------------------------------------------------G------- 651 (933)
Q Consensus 651 ------------------------------------------------------------------------~------- 651 (933)
+
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 002346 652 ----------------------------------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV 697 (933)
Q Consensus 652 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 697 (933)
...||-||||+..++.+++++.+... .....++++++|++||
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHH
Confidence 12378899998888877776532211 4678899999999999
Q ss_pred HHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC------C-----------CCceeecccccccCccccccc
Q 002346 698 EYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP------D-----------GKYSVETRLAGTFGYLAPEYA 760 (933)
Q Consensus 698 ~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~------~-----------~~~~~~~~~~gt~~y~aPE~~ 760 (933)
+|+|+ +|||||||||.||++|++..|||+|||+|.... + ......+..+||.-|+|||++
T Consensus 711 aYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 99999 899999999999999999999999999998611 0 011123557899999999998
Q ss_pred CCC---CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHH
Q 002346 761 ATG---RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAEL 837 (933)
Q Consensus 761 ~~~---~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l 837 (933)
.+. .|+.|+|+||+||+++||+. ||... +++.....-.+ .+.++.. +.+.. +....=+.+
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~LR-----~g~iP~~--~~f~~-----~~~~~e~sl 850 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASILTNLR-----KGSIPEP--ADFFD-----PEHPEEASL 850 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHHHhcc-----cCCCCCC--ccccc-----ccchHHHHH
Confidence 654 49999999999999999994 56543 33333332222 3334433 11111 111233589
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 002346 838 AGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 838 i~~cl~~~P~~RPs~~evl~ 857 (933)
|+++++.||.+|||+.|++.
T Consensus 851 I~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 851 IRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhcCCCccCCCHHHHhh
Confidence 99999999999999999986
No 307
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-35 Score=301.75 Aligned_cols=251 Identities=27% Similarity=0.416 Sum_probs=204.5
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeE
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 655 (933)
...+.|+.-++||+||||.||-.+. .+|+.||.|++.+..... ....-...|-.++++++.+.||.+-..|+..+..+
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 3346788889999999999999844 479999999987765432 23345678999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+|+..|.||+|.-+|.. .+...+++..+.-++.+|+-||++||+ .+||+||+||+|||+|++|+++|+|.|+|.
T Consensus 262 lVLtlMNGGDLkfHiyn---~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYN---HGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAV 335 (591)
T ss_pred EEEEeecCCceeEEeec---cCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEE
Confidence 99999999999998854 344679999999999999999999998 899999999999999999999999999999
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
....+.. ....+||.+|||||++..+.|+...|.||+||++|||+.|+.||...-..... .+.-++.+......++
T Consensus 336 ei~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~--eEvdrr~~~~~~ey~~ 411 (591)
T KOG0986|consen 336 EIPEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR--EEVDRRTLEDPEEYSD 411 (591)
T ss_pred ecCCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH--HHHHHHHhcchhhccc
Confidence 8887653 23459999999999999999999999999999999999999999764322111 1112223333333332
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD 851 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs 851 (933)
-+ ..+...+-+..|++||.+|..
T Consensus 412 kF-------------S~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 412 KF-------------SEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred cc-------------CHHHHHHHHHHHccCHHHhcc
Confidence 22 234567888899999999983
No 308
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-33 Score=305.12 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=195.4
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 659 (933)
+|...+.||+|+||.||++.. .+++.||+|++...... .....+.+|+.++.++. |+||+++++++..+...+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 455678899999999999954 56899999998765432 44567899999999996 9999999999999899999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+. +++.++...........+++..+..++.+++.|++|||+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 985 466554322111223568999999999999999999997 25999999999999999999999999999875543
Q ss_pred CCceeecccccccCcccccccCCC---CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATG---RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
... .....|++.|+|||++.+. .++.++|||||||++|||++|+.||..... .......... ...+
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~--~~~~-- 229 (288)
T cd06616 161 SIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVK--GDPP-- 229 (288)
T ss_pred CCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcC--CCCC--
Confidence 221 1234688999999998766 688999999999999999999999975421 1111111111 1111
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+. .........++.+++.+|++.+|++||++.++++
T Consensus 230 ---~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 230 ---ILS-NSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ---cCC-CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 0011123346789999999999999999999986
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-33 Score=306.47 Aligned_cols=265 Identities=23% Similarity=0.314 Sum_probs=199.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 657 (933)
++|++.+.||+|+||.||+|... +++.||+|.++...........+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 47888999999999999999664 688999999976644444445678899999999999999999998877 889999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||++ ++|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 85 MEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred ehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 99996 59998886521 358999999999999999999998 89999999999999999999999999998866
Q ss_pred CCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh---------
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL--------- 807 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~--------- 807 (933)
..... ......+++.|+|||++.+. .++.++|+||+|+++|||++|+.||......+.... ......
T Consensus 157 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (293)
T cd07843 157 GSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNK--IFKLLGTPTEKIWPG 233 (293)
T ss_pred cCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHhCCCchHHHHH
Confidence 54321 12234578899999988654 468999999999999999999999976543221111 000000
Q ss_pred ------hccCCCCcccCCCCCCChhhHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ------ISKENIPKAIDPNLNLDEETIE-SIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ------~~~~~~~~~~d~~l~~~~~~~~-~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.............+. ...... ....+.+++.+|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLR-KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhccchhcccccccccchhhh-ccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000000 000000 1345679999999999999999999986
No 310
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.3e-33 Score=309.90 Aligned_cols=270 Identities=24% Similarity=0.336 Sum_probs=200.2
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC--ce
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING--SE 653 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~ 653 (933)
.+.++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.+++++ +||||+++++++... ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 34678999999999999999999654 688999999865433344456788899999999 999999999988643 46
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred EEEEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 799999996 599888854 267899999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCc----eeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHH--
Q 002346 734 VKNAPDGKY----SVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRV-- 806 (933)
Q Consensus 734 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~-- 806 (933)
+........ .......|++.|+|||++.+ ..++.++||||||+++|||++|+.||....+.+...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 886544322 12234578999999998754 45788999999999999999999999765432221111000000
Q ss_pred ------h--hccCCCCcccC-CC-CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 807 ------L--ISKENIPKAID-PN-LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 807 ------~--~~~~~~~~~~d-~~-l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .....+.+.+. .. .............+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 0 00000000000 00 0000000112346789999999999999999999987
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-33 Score=303.28 Aligned_cols=265 Identities=25% Similarity=0.345 Sum_probs=199.0
Q ss_pred CccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|++.+.||.|++|.||+|.. .+|+.||+|++............+.+|+++++.++|||++++++++.++...++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56788999999999999955 47999999998766444444567889999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
+ ++|.+++.... ...+++..++.++.|+++||+|||+ ++++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~-~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 81 D-LDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred C-cCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 4 69999986522 1368999999999999999999998 899999999999999999999999999987554322
Q ss_pred ceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC-------CC
Q 002346 742 YSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE-------NI 813 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 813 (933)
. ......+++.|+|||++.+. .++.++||||||+++|||++|+.||....... .+....+....... .+
T Consensus 154 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 R-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred c-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhc
Confidence 1 11233568899999987654 57889999999999999999999997643321 11111111000000 00
Q ss_pred Cc---ccCCC--CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 814 PK---AIDPN--LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 814 ~~---~~d~~--l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
++ .+... .............+.+++.+|++.+|++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00000 0000001111245779999999999999999999985
No 312
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6e-33 Score=300.10 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=198.6
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
.|...+.||+|++|.||++.. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++..++..++|+||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 344567899999999999964 57899999988644 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.. ..+++.++..++.|++.|++|||+ ++|+||||+|+||+++.++.++|+|||.+......
T Consensus 98 ~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 98 LEGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred cCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 999999999854 458899999999999999999999 89999999999999999999999999987754432
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||....+... ........ .+....
T Consensus 169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~~~~~~~~--~~~~~~-- 237 (285)
T cd06648 169 VP-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------MKRIRDNL--PPKLKN-- 237 (285)
T ss_pred Cc-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------HHHHHhcC--CCCCcc--
Confidence 21 12334689999999999888899999999999999999999999976432211 11111111 000000
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+.+++.+|++.+|++||++.++++
T Consensus 238 ------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 ------LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ------cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0011235789999999999999999999986
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.5e-33 Score=305.07 Aligned_cols=270 Identities=22% Similarity=0.272 Sum_probs=198.7
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCce-----
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSE----- 653 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 653 (933)
++|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688999999999999999965 46899999998765433334567889999999995 6999999999877655
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEeccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFG 732 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfG 732 (933)
.++||||+++ +|.+++..........+++..++.++.||++||+|||+ ++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 89998865433323568999999999999999999998 89999999999999998 8899999999
Q ss_pred ccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE 811 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 811 (933)
+++....... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||....+.. .+...+........
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHhCCCCh
Confidence 9875433211 1122356889999998865 457899999999999999999999997643221 11111111000000
Q ss_pred -CCCcccC-------CCCC---CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 -NIPKAID-------PNLN---LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 -~~~~~~d-------~~l~---~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+.... +... ..........++.+++.+|++.+|++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000 0000 00000112345789999999999999999999986
No 314
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=283.55 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=199.8
Q ss_pred HHhcCCccC-CccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee----
Q 002346 578 QVTDNFSEA-NILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN---- 650 (933)
Q Consensus 578 ~~~~~~~~~-~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 650 (933)
.++++|++- ++||-|-.|.|... +..+|+.+|+|++... ...++|++.--.. .|||||.++++|..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 346677654 68999999999987 5567999999998754 3567888875555 69999999998864
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC---CCcEE
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAK 727 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~---~~~~k 727 (933)
....++|||+|+||.|...+.+ .+...++++++..|+.||+.|+.|||+ ..|.||||||+|+|.+. |..+|
T Consensus 131 rkcLLiVmE~meGGeLfsriq~---~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lK 204 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQD---RGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLK 204 (400)
T ss_pred ceeeEeeeecccchHHHHHHHH---cccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceE
Confidence 3566799999999999999976 345679999999999999999999999 89999999999999974 45799
Q ss_pred EecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 728 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|+|||+|+...... .-...+-||.|.|||++...+|+..+|+||+||++|-|++|.+||........ -....+++.
T Consensus 205 LtDfGFAK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai--spgMk~rI~ 280 (400)
T KOG0604|consen 205 LTDFGFAKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGMKRRIR 280 (400)
T ss_pred ecccccccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC--ChhHHhHhh
Confidence 99999999765422 12345779999999999999999999999999999999999999987543111 000011111
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHH-HHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYR-VAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ....+...+|.++.+ .+++|+.+|..+|++|.|+.+++.
T Consensus 281 ~----------gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 281 T----------GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c----------cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 122234455666655 458999999999999999999986
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.1e-33 Score=296.24 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=206.5
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|++|.||+|... +++.||||++...... .....+.+|+.++++++|+||+++++++..+...++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36888999999999999999665 5999999998776432 456789999999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+++++|.+++... .++++..++.++.|+++|++|||+. .+++||||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 80 YMDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred ecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999652 5689999999999999999999962 6999999999999999999999999999886544
Q ss_pred CCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 740 GKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.... .....++..|+|||.+.+..++.++||||||+++|||++|+.||.............++. .... ..++.
T Consensus 153 ~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~-~~~~~ 225 (264)
T cd06623 153 TLDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-----DGPP-PSLPA 225 (264)
T ss_pred CCCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-----cCCC-CCCCc
Confidence 3322 123467899999999998889999999999999999999999997654312222222111 1111 11111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. .....+.+++.+|++.+|++||++.++++
T Consensus 226 ~--------~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 226 E--------EFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred c--------cCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 02246789999999999999999999987
No 316
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.1e-33 Score=308.97 Aligned_cols=272 Identities=22% Similarity=0.295 Sum_probs=199.3
Q ss_pred CCccCCccccCCCeEEEEEEeC---CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeE
Q 002346 582 NFSEANILGRGGFGVVYGGELP---DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 655 (933)
+|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999654 478999999987431 122346778899999999999999999999887 7899
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC----CCcEEEecc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD----DMRAKVADF 731 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~----~~~~kl~Df 731 (933)
+||||++ ++|.+++..........+++..++.++.|++.|++|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 477777755333333478999999999999999999998 89999999999999999 999999999
Q ss_pred cccccCCCCCc--eeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCch-------hhHHHH
Q 002346 732 GLVKNAPDGKY--SVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDD-------RAHLVT 801 (933)
Q Consensus 732 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~-------~~~~~~ 801 (933)
|++........ .......+++.|+|||++.+. .++.++||||||+++|||++|+.||....... ...+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886543221 112335678999999987654 57899999999999999999999997544322 011111
Q ss_pred HHHHHhhc----------cCCCCc---ccC-CCCCCCh-hh---H--HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 802 WFRRVLIS----------KENIPK---AID-PNLNLDE-ET---I--ESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 802 ~~~~~~~~----------~~~~~~---~~d-~~l~~~~-~~---~--~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+...... ...... ... ....... .. . ....++.+++.+|++.+|++||++.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11100000 000000 000 0000000 00 0 22346789999999999999999999986
No 317
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.2e-33 Score=298.65 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=206.3
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|+||.||++. ..+++.+|+|++...........++.+|++++++++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 57888999999999999995 45788999999987655555667888999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.+.. .....+++..++.++.|+++|++|||+ .+++||||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999986632 223568999999999999999999998 89999999999999999999999999999866554
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
. .....|++.|+|||+..+..++.++|+||+|+++|||++|+.||........ .. ... ....+..
T Consensus 157 ~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~---~~---~~~--~~~~~~~---- 221 (256)
T cd08530 157 M---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL---RY---KVQ--RGKYPPI---- 221 (256)
T ss_pred C---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH---HHh--cCCCCCC----
Confidence 1 2234688999999999988899999999999999999999999976533211 11 111 1111111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+.+++.+|++.+|++||++.++++
T Consensus 222 ------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 222 ------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1122346889999999999999999999986
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3e-33 Score=312.17 Aligned_cols=267 Identities=22% Similarity=0.328 Sum_probs=200.2
Q ss_pred HHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING----- 651 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 651 (933)
.+.++|++.+.||+|+||.||+|.. .+++.||+|++...........++.+|+.+++.++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 4568899999999999999999954 5789999999876543444556788899999999999999999988643
Q ss_pred -ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 652 -SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 652 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
...++||||+. ++|.+.+.. .+++.++..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 35699999995 588888743 27889999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH-HH---------
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH-LV--------- 800 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~-~~--------- 800 (933)
||+++....... .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... +.
T Consensus 162 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 162 FGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred CccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 999986544321 233468899999999998899999999999999999999999997543211100 00
Q ss_pred --HH----HHHHhhccCC-----CCcccCCCCCC---ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 801 --TW----FRRVLISKEN-----IPKAIDPNLNL---DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 801 --~~----~~~~~~~~~~-----~~~~~d~~l~~---~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. .......... +.+.+...... ..........+.+++.+|++.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000000000 00001000000 0001123445779999999999999999999986
No 319
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3e-33 Score=301.37 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=186.4
Q ss_pred ccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchh-HHHHHHHHHHHH---hcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 588 ILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKG-LSEFQAEIAVLT---KVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
.||+|+||.||++.. .+++.||+|.+......... ...+.+|..+++ ..+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999965 46899999998765432222 233444544333 3479999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 81 GGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 9999998864 2468999999999999999999999 899999999999999999999999999987554322
Q ss_pred eeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
.....|++.|+|||.+.. ..++.++||||+||++|||++|+.||........... ..... .....+.+.
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~---~~~~~~~~~- 221 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMTL---TVNVELPDS- 221 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH----HHHhh---cCCcCCccc-
Confidence 123468999999998864 5678999999999999999999999976433222111 11110 011111111
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 822 NLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 822 ~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...++.+++.+|++.+|++|| +++++++
T Consensus 222 --------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 222 --------FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred --------cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 124577999999999999999 5888876
No 320
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-33 Score=305.81 Aligned_cols=271 Identities=27% Similarity=0.344 Sum_probs=200.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLL 656 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 656 (933)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++...........+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 36789999999999999999965 4689999999876543333334567899999999999999999998754 46799
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
||||++ ++|.+++... ...+++.++..++.|+++|++|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 86 v~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 86 VMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999996 5888888542 2568999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-cCCCC
Q 002346 737 APDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-KENIP 814 (933)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 814 (933)
...... ......+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||....+.+.... +...... .....
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~---~~~~~~~~~~~~~ 233 (309)
T cd07845 158 YGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL---IIQLLGTPNESIW 233 (309)
T ss_pred cCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCChhhc
Confidence 654321 1122346788999998865 4578999999999999999999999986543322111 1111000 00000
Q ss_pred -c--------cc--CC-CCC-CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCC
Q 002346 815 -K--------AI--DP-NLN-LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 815 -~--------~~--d~-~l~-~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 868 (933)
. .+ .. ... ...........+.+++.+|++.||++||++.++++ ++|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~------h~~f~ 294 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE------SSYFK 294 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc------Chhhc
Confidence 0 00 00 000 00000012345678999999999999999999986 66654
No 321
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.5e-33 Score=303.67 Aligned_cols=267 Identities=24% Similarity=0.326 Sum_probs=197.4
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
++|++.+.||+|++|.||+|.. .+|+.||+|++..........+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4788999999999999999965 478999999987654334445678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEecccccccCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGLVKNAP 738 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~~~ 738 (933)
|++ ++|.+++... ....+++..+..++.||+.||+|||+ ++++||||+|+||+++. ++.+||+|||++....
T Consensus 82 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 82 YLD-LDLKKHMDSS---PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred ccc-ccHHHHHHhC---CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 995 5888887442 12346888899999999999999998 89999999999999985 5679999999987554
Q ss_pred CCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC-----
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN----- 812 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 812 (933)
... .......|++.|+|||++.+. .++.++||||+|+++|+|+||+.||....+.+.. ...+.........
T Consensus 155 ~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 155 IPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL--FKIFRILGTPNEETWPGV 231 (294)
T ss_pred CCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCChhhcccc
Confidence 321 112234678899999988654 5789999999999999999999999764332211 1111000000000
Q ss_pred --CCcccC--CCCCCC---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 --IPKAID--PNLNLD---EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 --~~~~~d--~~l~~~---~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
++.... +..... ........++.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 000000 000111245779999999999999999999986
No 322
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-33 Score=307.59 Aligned_cols=268 Identities=23% Similarity=0.312 Sum_probs=196.1
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-------
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS------- 652 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 652 (933)
++|++.+.||+|+||.||+|.. .+++.||||++............+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 5799999999999999999965 46899999998765433333456778999999999999999999987643
Q ss_pred -eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 653 -ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 653 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
..++||||+. ++|.+++... ...+++.+++.++.|++.||+|||+ ++++|+||||+||+++.++.+||+||
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcC
Confidence 4599999996 5888887541 2358999999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCce---eecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 732 GLVKNAPDGKYS---VETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 732 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|++......... ......++..|+|||++.+. .++.++||||||+++|||++|+.||....+.........+....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 998755432211 11234678899999988654 47889999999999999999999997654432222221111000
Q ss_pred hccCCCCcc-----cCC-CCCCCh---h-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKA-----IDP-NLNLDE---E-----TIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~-----~d~-~l~~~~---~-----~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.. .+. ...... . .......+.+++.+|++.+|++||+++++++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 -TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred -ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000000 000 000000 0 0001234668999999999999999999986
No 323
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.2e-33 Score=309.52 Aligned_cols=266 Identities=22% Similarity=0.342 Sum_probs=200.0
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee----Ccee
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSER 654 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 654 (933)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 47899999999999999999954 569999999998654444456778899999999999999999988753 3467
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+. ++|.+++.. ...+++..+..++.|+++||+|||+ ++|+||||||+||++++++.+||+|||++
T Consensus 84 ~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS-----DQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred EEEEehhh-hhHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccc
Confidence 99999995 689888854 2458999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCce---eecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-
Q 002346 735 KNAPDGKYS---VETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS- 809 (933)
Q Consensus 735 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~- 809 (933)
......... ......|+..|+|||++.+ ..++.++||||||+++|||++|+.||......... ..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~---~~~~~~~g~~ 231 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL---KLILSVLGSP 231 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH---HHHHHHhCCC
Confidence 755432211 1123578899999998765 46889999999999999999999999764332111 111100000
Q ss_pred ---------cCCCCcc---cCCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 ---------KENIPKA---IDPNLNL--DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ---------~~~~~~~---~d~~l~~--~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+.+. ....... ..........+.+++.+|++.+|++||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000 0000000 0001122456889999999999999999999887
No 324
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=9.2e-33 Score=299.10 Aligned_cols=252 Identities=25% Similarity=0.431 Sum_probs=203.7
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.++.|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++.++|+||+++++++..+...++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 3567888899999999999999665 689999999876532 456789999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
+||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||+|+||+++.++.++|+|||++...
T Consensus 94 ~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 94 MEYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 99999999999997621 369999999999999999999998 89999999999999999999999999987654
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..... ......+++.|+|||++.+..++.++||||||+++|||++|+.||....+.... . ... ....+...
T Consensus 167 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--~----~~~--~~~~~~~~ 237 (286)
T cd06614 167 TKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--F----LIT--TKGIPPLK 237 (286)
T ss_pred ccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--H----HHH--hcCCCCCc
Confidence 43221 122345788999999998888999999999999999999999999754332111 1 111 11111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
++ ......+.+++.+|++.+|.+||++.++++
T Consensus 238 ~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 238 NP--------EKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ch--------hhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 10 112245779999999999999999999986
No 325
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6e-33 Score=294.94 Aligned_cols=249 Identities=27% Similarity=0.484 Sum_probs=204.7
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|++|.||++.. .+++.||+|.+..........+.+.+|++++++++|+|++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 478889999999999999955 4688999999987755445678899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++... ..+++..+..++.|++.|++|||+ .+|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999998652 568999999999999999999998 89999999999999999999999999999866544
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
... .....|+..|+|||...+..++.++|||++|+++|+|++|+.||....+.. ... ..... . ...+.+.
T Consensus 153 ~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~--~~~---~~~~~---~-~~~~~~~ 222 (254)
T cd06627 153 SKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA--ALF---RIVQD---D-HPPLPEG 222 (254)
T ss_pred ccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH--HHH---HHhcc---C-CCCCCCC
Confidence 321 233468899999999988888999999999999999999999997543211 111 11111 1 1111111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ...+.+++.+|++.+|++||++.+++.
T Consensus 223 ~---------~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 I---------SPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred C---------CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1 245779999999999999999999975
No 326
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.4e-33 Score=302.14 Aligned_cols=247 Identities=25% Similarity=0.406 Sum_probs=196.9
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+.|+..+.||+|+||.||+|.. .+++.||+|++..... .....+++.+|+.+++.++||||+++++++..++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 5688889999999999999965 4689999999865432 2344567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+. |++.+++... ...+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.++|+|||++....
T Consensus 95 e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 95 EYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred HhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 9996 6777776431 2458999999999999999999998 899999999999999999999999999987554
Q ss_pred CCCceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.. ....|++.|+|||++. .+.++.++||||||+++|||++|+.||........ . ..... ...
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---~---~~~~~--~~~-- 231 (307)
T cd06607 167 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---L---YHIAQ--NDS-- 231 (307)
T ss_pred CC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH---H---HHHhc--CCC--
Confidence 32 2346888999999874 45688999999999999999999999976432211 1 11110 011
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.+. .......+.+++.+||+.+|++||++.+++.
T Consensus 232 ---~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 232 ---PTLS----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ---CCCC----chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111 1112346789999999999999999999986
No 327
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-32 Score=292.11 Aligned_cols=249 Identities=27% Similarity=0.461 Sum_probs=204.0
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|+..+.||+|++|.||++... +++.|++|++..... ...+.+.+|++++++++|++|+++++++..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4778899999999999999664 689999999976532 4567899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++.... ..+++..+..++.|+++|++|||+ .+++||||+|+||++++++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 79 CSGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred CCCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 99999999986521 468999999999999999999998 89999999999999999999999999998866554
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
.. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||........... . . ....+...++.
T Consensus 152 ~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~---~--~~~~~~~~~~~ 221 (253)
T cd05122 152 KA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---I---A--TNGPPGLRNPE 221 (253)
T ss_pred cc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---H---H--hcCCCCcCccc
Confidence 32 2345788999999999888899999999999999999999999976532221111 0 0 11111111110
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|++.+|++||++.++++
T Consensus 222 --------~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 222 --------KWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --------ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01245789999999999999999999975
No 328
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=283.63 Aligned_cols=269 Identities=22% Similarity=0.335 Sum_probs=218.7
Q ss_pred HHHHHHHhcCCccCCccccCCCeEEEEEEe------CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEe
Q 002346 573 IEVLRQVTDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG 646 (933)
Q Consensus 573 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 646 (933)
..++..-.++++...++-+|.||.||+|.+ .+.+.|-||.++... ++-+...+..|...+..+.|||+.++.+
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 455666678899999999999999999944 334567788776553 5566778899999999999999999999
Q ss_pred EeeeC-ceeEEEEeecCCCChhhHhhhcc---cCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC
Q 002346 647 YCING-SERLLVYEYMPRGTLAQHLFEWH---DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (933)
Q Consensus 647 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~ 722 (933)
.+.++ +..+++|.++.-|+|..|+...+ ....+.++-.+...++.|++.|++|||+ ++|||.||.++|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehh
Confidence 98764 56789999999999999997433 2234568888899999999999999999 99999999999999999
Q ss_pred CCcEEEecccccccCCCCCceeecc-cccccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHH
Q 002346 723 DMRAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLV 800 (933)
Q Consensus 723 ~~~~kl~DfGla~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~ 800 (933)
.-++||+|=.+++...+.+++.-+. -..+..||+||.+....|+.++|||||||++|||+| |+.|+..-+|.+..++.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl 511 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL 511 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH
Confidence 9999999999999888777665332 234568999999999999999999999999999999 89999887776655443
Q ss_pred HHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 801 TWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 801 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
. ....+...+ +.+.++..++..||...|++||+++|++..|.+..
T Consensus 512 k-------dGyRlaQP~-----------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 512 K-------DGYRLAQPF-----------NCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred h-------ccceecCCC-----------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2 222222211 22346778999999999999999999999987654
No 329
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-32 Score=292.65 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=207.4
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||.|+||.||++.. .+++.||+|++..........+++.+|+++++.++|||++++++.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 578889999999999999965 3689999999987655556677899999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++++|.+++..... ....+++.++..++.++++|++|||+ .+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999976332 23679999999999999999999999 89999999999999999999999999998866544
Q ss_pred CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCC
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPN 820 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 820 (933)
. .......|++.|+|||...+..++.++||||+|+++|+|++|+.||....... ....... .... .+..
T Consensus 157 ~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~~--~~~~-~~~~- 225 (258)
T cd08215 157 V-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE------LALKILK--GQYP-PIPS- 225 (258)
T ss_pred c-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH------HHHHHhc--CCCC-CCCC-
Confidence 3 12233578899999999988889999999999999999999999997643211 1111111 1111 1111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 821 LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 821 l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|+..+|++||++.++++
T Consensus 226 --------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 --------QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --------CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11245779999999999999999999986
No 330
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.8e-33 Score=311.70 Aligned_cols=265 Identities=23% Similarity=0.375 Sum_probs=196.6
Q ss_pred HhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----c
Q 002346 579 VTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----S 652 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 652 (933)
++++|++.+.||+|+||.||+|. ..+|+.||+|++.... ......++.+|+.++++++||||+++++++... .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 35789999999999999999995 4578999999986432 233456788999999999999999999987643 3
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..++||||++ ++|.+.+.. ..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred eEEEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECccc
Confidence 5799999996 588877743 468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCce--eecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc
Q 002346 733 LVKNAPDGKYS--VETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS 809 (933)
Q Consensus 733 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 809 (933)
++......... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+...+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~ 228 (336)
T cd07849 152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGT 228 (336)
T ss_pred ceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCC
Confidence 98765432211 1133578999999998654 568899999999999999999999996542211 11111110000
Q ss_pred c--CCCC-----------cccC--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 K--ENIP-----------KAID--PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~--~~~~-----------~~~d--~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. +... .... +.............++.+++.+|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 0000 0000 000000000112345789999999999999999999987
No 331
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.1e-33 Score=294.71 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=205.4
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEEEE
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLLVY 658 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 658 (933)
+|+..+.||+|++|.||+|... +++.|++|++..........+.+.+|+.++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999664 789999999987654445678899999999999999999999999988 8899999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++++|.+++... ..+++.+++.++.|+++|++|||+ .+++|+||+|+||+++.++.++|+|||.+....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999652 378999999999999999999999 899999999999999999999999999988665
Q ss_pred CCCce-eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 739 DGKYS-VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 739 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..... ......++..|+|||...+...+.++||||||+++|+|++|+.||....... ........ ....+. +
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~-~~~~~~-~ 225 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-----AALYKIGS-SGEPPE-I 225 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHHhccc-cCCCcC-C
Confidence 54321 1233568899999999988889999999999999999999999997654111 11111110 011111 1
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.. .....+.+++.+|++.+|++||++.++++
T Consensus 226 ~~---------~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 226 PE---------HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred Cc---------ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11 11346789999999999999999999986
No 332
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-32 Score=293.35 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=197.2
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEecccc---CCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--cee
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNT---MGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SER 654 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 654 (933)
.+|++.+.||+|+||.||+|.. .+++.||+|++.... ........+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788999999999999999954 568999999875432 1234456899999999999999999999998764 457
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+++++|.+++.. ...+++..+..++.|++.|++|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 82 ~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 153 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA-----YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (264)
T ss_pred EEEEEeCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccc
Confidence 899999999999999864 2457899999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCC--ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGK--YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
+...... ........|+..|+|||++.+..++.++|||||||++|||++|+.||........ . ..... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~--~~ 225 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--I----FKIAT--QP 225 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--H----HHHHc--CC
Confidence 7543211 1111235688999999999888899999999999999999999999975422211 1 11111 11
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....++.. ....+.+++.+|++ +|.+||++.+++.
T Consensus 226 ~~~~~p~~---------~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 TKPMLPDG---------VSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCCcc---------cCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11111111 12457799999999 5799999998865
No 333
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.4e-33 Score=302.78 Aligned_cols=256 Identities=25% Similarity=0.361 Sum_probs=200.7
Q ss_pred CCccCCccccCCCeEEEEEEe----CCCcEEEEEEeccccCC--chhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCcee
Q 002346 582 NFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSER 654 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 654 (933)
+|++.+.||+|+||.||++.. .+++.||||.++..... ....+.+.+|++++.++ +||||+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999853 35789999998754221 23346788999999999 599999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++
T Consensus 81 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccc
Confidence 999999999999999854 2458899999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCceeecccccccCcccccccCCCC--CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAATGR--VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
+..............|+..|+|||.+.+.. .+.++||||||+++|||++|+.||....... ...............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~ 230 (288)
T cd05583 153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHccCCC
Confidence 765443332233456899999999987655 7889999999999999999999996432211 111111222211111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.+..+ ...+.+++.+|++.+|++||++.++.+.|+
T Consensus 231 ~~~~~-------------~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 231 FPKTM-------------SAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCccc-------------CHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 11111 134678999999999999999988877664
No 334
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7.6e-33 Score=307.29 Aligned_cols=262 Identities=21% Similarity=0.351 Sum_probs=198.8
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc--
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-- 652 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 652 (933)
+..+.++|++.+.||+|+||.||+|. ..+++.||||++............+.+|+.++++++||||+++++++..+.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 34467899999999999999999995 557999999998654333444567889999999999999999999987543
Q ss_pred ----eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 653 ----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 653 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
..++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+ .+|+||||||+||+++.++.+||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEE
Confidence 458999999 7799888743 458999999999999999999998 89999999999999999999999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
+|||++...... .....+++.|+|||++.+ ..++.++||||+|+++|++++|+.||........ ... ..
T Consensus 160 ~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~----~~ 229 (343)
T cd07880 160 LDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LME----IM 229 (343)
T ss_pred eecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH----HH
Confidence 999998765432 123467899999998865 4588999999999999999999999975432111 111 00
Q ss_pred hccCCCCcccC---------------CCCCCC---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKAID---------------PNLNLD---EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~~d---------------~~l~~~---~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......+..+. +..... .........+.+++.+|++.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 230 KVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000 000000 000011235779999999999999999999985
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.1e-33 Score=301.36 Aligned_cols=264 Identities=25% Similarity=0.325 Sum_probs=200.3
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC--ceeEEEEe
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLLVYE 659 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 659 (933)
|++.+.||+|+||.||+|... +++.||+|++............+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999664 589999999987643344456788999999999999999999999887 78999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|++ ++|.+++... ...+++.+++.++.|+++|++|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 81 YMD-HDLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred ccc-ccHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 997 4888888541 1468999999999999999999998 8999999999999999999999999999886655
Q ss_pred CCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--cCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS--KENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 816 (933)
..........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .+...... ....+..
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE---KIFELCGSPTDENWPGV 229 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCchhhcccc
Confidence 43222334467889999997754 457899999999999999999999997654322211 11111000 0000000
Q ss_pred --------cCCCCCCCh-----hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 --------IDPNLNLDE-----ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 --------~d~~l~~~~-----~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+...... ........+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000 00001456789999999999999999999986
No 336
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.3e-33 Score=308.06 Aligned_cols=263 Identities=23% Similarity=0.351 Sum_probs=198.5
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----ce
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SE 653 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 653 (933)
.++|.+.+.||+|+||.||+|.. .+++.||||++...........++.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999954 5789999999876533344456778899999999999999999987643 34
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++||||+. ++|.+++.. ...+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 84 ~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS-----SQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 799999995 789888854 2468999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc---
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS--- 809 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--- 809 (933)
++...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||........ ...+......
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 230 (337)
T cd07858 155 ARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ---LKLITELLGSPSE 230 (337)
T ss_pred ccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCCh
Confidence 98654432 11233467889999998764 4688999999999999999999999975432111 1101100000
Q ss_pred -------cCC-------CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 -------KEN-------IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 -------~~~-------~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
... .+...++.. ..........+.+++.+|++.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSF--ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCH--HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 000 000000000 0001122345789999999999999999999987
No 337
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9e-33 Score=295.11 Aligned_cols=244 Identities=23% Similarity=0.343 Sum_probs=196.0
Q ss_pred cccCCCeEEEEEEeC-CCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGELP-DGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||.||++... +++.||+|++...... ....+.+.+|+.+++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999664 5899999998765432 34457899999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++.. ...+++..+..++.|++.||+|||+ ++++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~ 150 (262)
T cd05572 81 WTILRD-----RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTW 150 (262)
T ss_pred HHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccc
Confidence 999965 2458899999999999999999998 899999999999999999999999999988665432 123
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...|++.|+|||++....++.++|+||+|+++|||++|+.||.....+. .............. .+....
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~----- 219 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNGKL--EFPNYI----- 219 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCCCC--CCCccc-----
Confidence 3468899999999988889999999999999999999999997654211 11122222101110 011111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 002346 827 TIESIYRVAELAGHCTAREPQQRPD-----MGHAVN 857 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RPs-----~~evl~ 857 (933)
...+.+++.+|++.+|++||+ +.|+++
T Consensus 220 ----~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 ----DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ----CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 245789999999999999999 566654
No 338
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-34 Score=307.90 Aligned_cols=246 Identities=23% Similarity=0.386 Sum_probs=195.4
Q ss_pred cCCccccCCCeEEEEE-EeCCCcEEEEEEecccc--CCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce--eEEEEe
Q 002346 585 EANILGRGGFGVVYGG-ELPDGTKIAVKRMESNT--MGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE--RLLVYE 659 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 659 (933)
...+||+|+|-+|||| +-.+|..||=-.++... .++...++|..|+.+|+.|+|||||++|.++.+... .-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3467999999999999 44567777633322222 245556899999999999999999999999987655 678999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEecccccccCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGLVKNAP 738 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~~~ 738 (933)
.+..|+|..|++++ +.++.+.+..|++||++||.|||+. .++|||||||-+||+|+. .|.|||+|.|+|....
T Consensus 124 L~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred cccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 99999999999873 4578889999999999999999984 579999999999999975 5899999999998665
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
... .....|||.|||||+.. ..|.+.+||||||+.++||+|+..||...... ...++++. .+..|..+.
T Consensus 198 ~s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-----AQIYKKV~--SGiKP~sl~ 266 (632)
T KOG0584|consen 198 KSH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-----AQIYKKVT--SGIKPAALS 266 (632)
T ss_pred ccc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-----HHHHHHHH--cCCCHHHhh
Confidence 432 23478999999999887 78999999999999999999999999754321 22233332 222333332
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.-- ..++.++|.+|+.. ..+||++.|++.
T Consensus 267 kV~---------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 267 KVK---------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ccC---------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 111 13577999999999 999999999986
No 339
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.3e-32 Score=300.36 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=196.7
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|...+.||+|+||.||+|.. .++..||+|++..... ..+...++.+|+++++.++|||++++++++..+...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 366788999999999999964 4689999999875432 23445678899999999999999999999999999999999
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+. |+|.+.+... ..++++.++..++.|++.|+.|||+ .+|+||||+|+||+++.++.+||+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 106 YCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred CCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 996 5887777441 2458999999999999999999998 8999999999999999999999999998875443
Q ss_pred CCceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcc
Q 002346 740 GKYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKA 816 (933)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (933)
. ....|++.|+|||++. .+.++.++|||||||++|||++|+.||........ . ....... .+..
T Consensus 178 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~----~~~~~~~--~~~~ 244 (317)
T cd06635 178 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L----YHIAQNE--SPTL 244 (317)
T ss_pred c-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--H----HHHHhcc--CCCC
Confidence 2 2346889999999873 45688999999999999999999999876422111 1 1111111 1100
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 817 IDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 817 ~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.. ......+.+++.+|++.+|.+||++.++++...
T Consensus 245 ~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 245 QS---------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CC---------ccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00 112235779999999999999999999997543
No 340
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.7e-33 Score=299.17 Aligned_cols=246 Identities=26% Similarity=0.388 Sum_probs=192.3
Q ss_pred cccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||+||++.. .+|+.||+|.+...... ......+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999954 46899999998764322 22345678899999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++.... ...+++.++..++.|++.|+.|||+ .+++||||+|+||++++++.+||+|||.+....... ...
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~ 152 (277)
T cd05577 81 KYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIK 152 (277)
T ss_pred HHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccc
Confidence 99996522 2468999999999999999999998 899999999999999999999999999987654321 123
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...++..|+|||++.+..++.++||||+|+++|+|++|+.||........... ........... +.+..
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~----- 221 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEE--LKRRTLEMAVE----YPDKF----- 221 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHH--HHhcccccccc----CCccC-----
Confidence 34678899999999888899999999999999999999999976543111110 00111110111 11111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 827 TIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
...+.+++.+|++.+|++|| ++.++++
T Consensus 222 ----~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 ----SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ----CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 23567999999999999999 5555543
No 341
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.4e-33 Score=302.99 Aligned_cols=269 Identities=26% Similarity=0.340 Sum_probs=200.5
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc----
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS---- 652 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 652 (933)
+..++|++.+.||+|+||.||+|... +|+.||+|+++...........+.+|+++++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999664 6899999998765433344567889999999999999999999987654
Q ss_pred ------eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcE
Q 002346 653 ------ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (933)
Q Consensus 653 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~ 726 (933)
..++|+||+++ ++..++... ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcE
Confidence 78999999975 777777541 2468999999999999999999999 899999999999999999999
Q ss_pred EEecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHH
Q 002346 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 727 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~ 805 (933)
||+|||++...............++..|+|||.+.+ ..++.++|||||||++|||++|++||....... .+.. +..
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--~~~~-~~~ 232 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--QLEL-ISR 232 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--HHHH-HHH
Confidence 999999988655433222223356788999998754 457889999999999999999999997543221 1111 111
Q ss_pred Hhhc--cCCCCcc--------cCCCCC----CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 806 VLIS--KENIPKA--------IDPNLN----LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 806 ~~~~--~~~~~~~--------~d~~l~----~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... ....+.. .+.... ...........+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1100 0000100 000000 00000012346789999999999999999999985
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.1e-33 Score=300.63 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=196.9
Q ss_pred CCccCCccccCCCeEEEEEEe----CCCcEEEEEEeccccC--CchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCcee
Q 002346 582 NFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTM--GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSER 654 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 654 (933)
+|++.+.||+|+||.||++.. .+|+.||+|++..... .....+++.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999965 4789999999875432 122346788999999999 599999999999998899
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred EEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 999999999999999865 2458899999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCceeecccccccCcccccccCCC--CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCC
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAATG--RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKEN 812 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (933)
...............|+..|+|||++... .++.++||||||+++|+|++|+.||....... ....+..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~~ 230 (290)
T cd05613 153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEPP 230 (290)
T ss_pred eecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhccCCC
Confidence 86544332222345689999999998653 46789999999999999999999996432211 111112221111111
Q ss_pred CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 813 IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 813 ~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
.+.. ....+.+++.+|++.+|++|| ++.+++.
T Consensus 231 ~~~~-------------~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 YPQE-------------MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCcc-------------CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1111 123567999999999999997 5566554
No 343
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.2e-32 Score=294.64 Aligned_cols=249 Identities=20% Similarity=0.258 Sum_probs=192.8
Q ss_pred HHHHHHhcCCccCCcc--ccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEee
Q 002346 574 EVLRQVTDNFSEANIL--GRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCI 649 (933)
Q Consensus 574 ~~l~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 649 (933)
.+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+....... .|+.....+ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEe
Confidence 3444455778888877 9999999999954 578899999987543211 122222222 7999999999999
Q ss_pred eCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEE
Q 002346 650 NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKV 728 (933)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl 728 (933)
.++..++||||+++++|.+++.. ..++++.++..++.|+++|++|||+ .+++||||||+||+++.++ .++|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKK-----EGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEE
Confidence 99999999999999999999965 1378999999999999999999999 8999999999999999998 9999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
+|||++...... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ......+.... .
T Consensus 152 ~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~ 224 (267)
T PHA03390 152 CDYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ-Q 224 (267)
T ss_pred ecCccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-c
Confidence 999998755432 2246889999999999888999999999999999999999999854332 21222222221 1
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD-MGHAVN 857 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs-~~evl~ 857 (933)
....... .....+.+++.+|++.+|++||+ ++++++
T Consensus 225 ~~~~~~~-------------~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 KKLPFIK-------------NVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ccCCccc-------------ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1111111 12235779999999999999996 588875
No 344
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-32 Score=298.07 Aligned_cols=266 Identities=23% Similarity=0.321 Sum_probs=199.2
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|++.+.||+|++|.||+|.. .+|+.||||++..... ....+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 588899999999999999966 4689999999876532 23346778899999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+++ +|.+++..... ...+++..+..++.|+++||+|||+ .+++||||||+||++++++.++|+|||++......
T Consensus 80 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 80 MDK-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred CCc-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 974 89888865221 2468999999999999999999998 89999999999999999999999999998754332
Q ss_pred CceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh----------hc
Q 002346 741 KYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL----------IS 809 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~----------~~ 809 (933)
.. ......+++.|++||++.+. .++.++||||||+++|||++|+.||......+... ....... ..
T Consensus 154 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 154 VN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL--KIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred cc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH--HHHHHhCCCChhhHHHHhc
Confidence 11 11234578899999988654 57889999999999999999999997654322111 1110000 00
Q ss_pred cCCCCcccCCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPKAIDPNLNL--DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~d~~l~~--~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+...... ..........+.+++.+|++.+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000000 0000112345779999999999999999999985
No 345
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.7e-33 Score=300.01 Aligned_cols=244 Identities=24% Similarity=0.422 Sum_probs=195.6
Q ss_pred CCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 586 ANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
...||+|+||.||++.. .+++.||+|++... .......+.+|+.+++.++|+||+++++++..++..++||||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 35799999999999965 57899999988643 2344567999999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCcee
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSV 744 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 744 (933)
+|.+++.. ..+++..+..++.|++.|++|||+ .+++||||+|+||++++++.++|+|||++........ .
T Consensus 103 ~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~ 172 (292)
T cd06657 103 ALTDIVTH------TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 172 (292)
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccc-c
Confidence 99998743 357899999999999999999998 8999999999999999999999999998875543221 1
Q ss_pred ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCC
Q 002346 745 ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLD 824 (933)
Q Consensus 745 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 824 (933)
.....|++.|+|||++.+..++.++||||+|+++|||++|+.||........ ...... ..+..+. .+.
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~~~~~~------~~~~~~~-~~~-- 240 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MKMIRD------NLPPKLK-NLH-- 240 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHh------hCCcccC-Ccc--
Confidence 2335688999999999888899999999999999999999999975432211 111111 1111110 000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 825 EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 825 ~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.....+.+++.+|++.+|.+||++.++++
T Consensus 241 ----~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 241 ----KVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ----cCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 11234678999999999999999999986
No 346
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=298.39 Aligned_cols=257 Identities=16% Similarity=0.210 Sum_probs=183.4
Q ss_pred hcCCccCCccccCCCeEEEEEEeCC----CcEEEEEEeccccCCch-h--------HHHHHHHHHHHHhcCCCcceeEEe
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNK-G--------LSEFQAEIAVLTKVRHRHLVALLG 646 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-~--------~~~~~~E~~~l~~l~h~niv~l~~ 646 (933)
.++|++.+.||+|+||.||+|...+ +..+|+|+......... + ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999997644 34566665432211100 0 011223344556678999999999
Q ss_pred EeeeCc----eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC
Q 002346 647 YCINGS----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (933)
Q Consensus 647 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~ 722 (933)
++.... ..++++|++. .++.+.+.. ....++..+..++.|+++|++|||+ ++|+||||||+|||++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR-----IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDG 161 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHh-----hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcC
Confidence 876543 3367788763 466666543 1335788899999999999999998 89999999999999999
Q ss_pred CCcEEEecccccccCCCCCce------eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchh
Q 002346 723 DMRAKVADFGLVKNAPDGKYS------VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDR 796 (933)
Q Consensus 723 ~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~ 796 (933)
++.++|+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 999999999999865322111 11234699999999999999999999999999999999999999986532211
Q ss_pred -hHH--HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 797 -AHL--VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 797 -~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
... ..+...........+ .....+.+++..|++.+|++||+++++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGKIKIK--------------NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhhhhhccC--------------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111 111111111110000 1124577999999999999999999999865
No 347
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=308.41 Aligned_cols=273 Identities=25% Similarity=0.360 Sum_probs=202.6
Q ss_pred CccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------ceeE
Q 002346 583 FSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------SERL 655 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 655 (933)
|...+.||+||||.||+|+ ...|+.||||.+.... .....+...+|++++++++|+|||++.+.-.+. ....
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 4456789999999999997 6789999999998764 445567889999999999999999999876543 3568
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec--CCC--cEEEecc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG--DDM--RAKVADF 731 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~--~~~--~~kl~Df 731 (933)
+|||||.+|+|...+.+... ...+++.+.+.++.+++.||.|||+ ++||||||||.||++- ++| ..||+||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEEeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecc
Confidence 99999999999999977433 3459999999999999999999998 9999999999999983 333 4899999
Q ss_pred cccccCCCCCceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
|.|+...++. .....+||+.|.+||.+. .+.|+..+|.|||||++||.+||..||..........-+.|........
T Consensus 169 G~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 169 GAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPS 246 (732)
T ss_pred cccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCC
Confidence 9999888765 456789999999999998 4889999999999999999999999997654432211122222111111
Q ss_pred C---------CCCcccCCCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhhhh
Q 002346 811 E---------NIPKAIDPNLNLD-EETIESIYRVAELAGHCTAREPQQRP--DMGHAVNVLGPLV 863 (933)
Q Consensus 811 ~---------~~~~~~d~~l~~~-~~~~~~~~~~~~li~~cl~~~P~~RP--s~~evl~~L~~~~ 863 (933)
+ .-+-.....++.. .........+-..+..++..+|++|- ...+....+..++
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 0 0000011112111 11223334455667777888888887 5555544444443
No 348
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.1e-32 Score=297.96 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=193.9
Q ss_pred CccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeC--ceeEEEE
Q 002346 583 FSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCING--SERLLVY 658 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ 658 (933)
|++.+.||+|+||.||+|.. .+++.||+|+++....+.. .....+|+.++.++. |+||+++++++.++ +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 56788999999999999954 4689999999876532222 234457888999885 99999999999887 8899999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||++ ++|.+++... ...+++.+++.++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++...
T Consensus 80 e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 80 ELMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred ecCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 9996 5888887542 2468999999999999999999998 89999999999999999 999999999988654
Q ss_pred CCCceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc--------
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-------- 809 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 809 (933)
.... .....++..|+|||++. ++.++.++||||+||++|||++|+.||....+.+. ..+.......
T Consensus 151 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 151 SKPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred cCCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHHh
Confidence 3321 12346789999999764 45678899999999999999999999976543221 1111111100
Q ss_pred ---cCCCCcccCCCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 ---KENIPKAIDPNLNLD--EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ---~~~~~~~~d~~l~~~--~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+....... .........+.+++.+|++.+|++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000000 001123467889999999999999999999986
No 349
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=321.79 Aligned_cols=283 Identities=23% Similarity=0.332 Sum_probs=222.2
Q ss_pred HHHHHHHhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeee
Q 002346 573 IEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCIN 650 (933)
Q Consensus 573 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 650 (933)
...++.-.++|.++++||+|+||.|..++. ..++.||.|++.+-.+- .....-|..|-.+|..-+.+=||++...|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 445566678999999999999999999965 46889999999874332 3334678899999999999999999999999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
..+.|+|||||+||+|...+.. +.++++.-++-++..|+-||.-+|+ .|+|||||||+|||+|..|++||+|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk-----~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSK-----FDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred ccceEEEEecccCchHHHHHhh-----cCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeecc
Confidence 9999999999999999999965 3468999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccCcccccccC----C-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHH
Q 002346 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAA----T-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 731 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~ 805 (933)
||.+.....+..-.....+|||.|++||++. + +.|++.+|.||+||++|||+.|..||+.. .++.-+.+
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~K 292 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGK 292 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHH
Confidence 9988766655545556679999999999884 2 57899999999999999999999999753 34455555
Q ss_pred HhhccCC--CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH----------HHhhhhhhcCCCC
Q 002346 806 VLISKEN--IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPD---MGHAVN----------VLGPLVEQWKPAT 870 (933)
Q Consensus 806 ~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs---~~evl~----------~L~~~~~~~~~~~ 870 (933)
+...+.. +|+.+ +...+..++|.+.+. +|+.|.. +.++.. .+++...++.|..
T Consensus 293 Im~hk~~l~FP~~~-----------~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPev 360 (1317)
T KOG0612|consen 293 IMNHKESLSFPDET-----------DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEV 360 (1317)
T ss_pred HhchhhhcCCCccc-----------ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcC
Confidence 5544322 22211 122445677877665 6888877 777654 2333344455555
Q ss_pred cCCCCCCcccc
Q 002346 871 REDEDGYGIDL 881 (933)
Q Consensus 871 ~~~~~~~~~~~ 881 (933)
....|.++++.
T Consensus 361 ssd~DTsnFd~ 371 (1317)
T KOG0612|consen 361 SSDDDTSNFDV 371 (1317)
T ss_pred CCCCccccccc
Confidence 55666666533
No 350
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.9e-32 Score=292.20 Aligned_cols=245 Identities=25% Similarity=0.367 Sum_probs=189.5
Q ss_pred CccccCCCeEEEEEEe-CCCcEEEEEEeccccCC-chhHHHHHHHHHHH-HhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVL-TKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
+.||+|+||.||+|.. .+++.||+|.++..... ......+..|..++ ...+|+|++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999955 46899999998765322 22233455555544 445899999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKT-----LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 999999865 2458899999999999999999999 8999999999999999999999999999875433
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
.....|++.|+|||.+.+..++.++||||||+++|||++|..||........ ...........+..+..
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~---- 218 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV------FDNILSRRINWPEEVKE---- 218 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHhcccCCCCcccc----
Confidence 2234688999999999888889999999999999999999999976433211 11111111111111111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.....+.+++.+|++.+|++||++.++.+.+
T Consensus 219 -----~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 219 -----FCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred -----cCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 1124577999999999999999876555543
No 351
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.9e-32 Score=295.06 Aligned_cols=243 Identities=23% Similarity=0.360 Sum_probs=187.0
Q ss_pred ccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchh-HHHHHHHH---HHHHhcCCCcceeEEeEeeeCceeEEEEeecC
Q 002346 588 ILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKG-LSEFQAEI---AVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
.||+|+||.||+|.. .+++.||+|.+......... ...+..|. +.++...||+|+++++++..++..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999954 46899999998765332211 22233443 34444579999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+++|.+++.. ...+++.++..++.|+++|++|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~- 151 (278)
T cd05606 81 GGDLHYHLSQ-----HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (278)
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence 9999998854 2468999999999999999999998 899999999999999999999999999987554322
Q ss_pred eeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
.....|+..|+|||++.++ .++.++||||+|+++|||++|+.||........... ..........++. .
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~----~- 221 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI---DRMTLTMAVELPD----S- 221 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH---HHHhhccCCCCCC----c-
Confidence 1234689999999998754 689999999999999999999999976533222111 1111111111111 1
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 002346 822 NLDEETIESIYRVAELAGHCTAREPQQRP-----DMGHAVN 857 (933)
Q Consensus 822 ~~~~~~~~~~~~~~~li~~cl~~~P~~RP-----s~~evl~ 857 (933)
....+.+++.+|+..+|.+|| ++.++++
T Consensus 222 --------~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 222 --------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --------CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 123577999999999999999 8999875
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.6e-32 Score=302.57 Aligned_cols=266 Identities=22% Similarity=0.356 Sum_probs=198.8
Q ss_pred HHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee-CceeE
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL 655 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 655 (933)
.++++|++.+.||+|+||.||+|. ..+++.||+|++..........+.+.+|++++++++||||+++++++.. +...+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 467899999999999999999995 4579999999987654344455778899999999999999999998865 55788
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||+ +++|.+++.. .++++..+..++.|+++||+|||+ .+|+||||+|+||++++++.++|+|||.+.
T Consensus 87 lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 87 FVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 999998 5689888753 457888899999999999999999 899999999999999999999999999987
Q ss_pred cCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHH-HH--------HHHH
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHL-VT--------WFRR 805 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~-~~--------~~~~ 805 (933)
..... .....+++.|+|||++.+ ..++.++||||||+++|||++|+.||........... .. +...
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54321 123467889999998765 5689999999999999999999999976533211100 00 0000
Q ss_pred Hhhcc-CCCCcccC--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 806 VLISK-ENIPKAID--PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 806 ~~~~~-~~~~~~~d--~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..... ..+...+. ...............+.+++.+|++.+|++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00000000 000000000112246789999999999999999999976
No 353
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.9e-32 Score=302.59 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=194.5
Q ss_pred CccccC--CCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCC
Q 002346 587 NILGRG--GFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (933)
Q Consensus 587 ~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 663 (933)
..||+| +||+||++.. .+|+.||+|++..........+.+.+|+.+++.++||||+++++++..++..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 457777 8999999965 5799999999886654555567899999999999999999999999999999999999999
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999986632 2358899999999999999999998 89999999999999999999999999865422211100
Q ss_pred e------ecccccccCcccccccCCC--CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC-
Q 002346 744 V------ETRLAGTFGYLAPEYAATG--RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP- 814 (933)
Q Consensus 744 ~------~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 814 (933)
. .....++..|+|||++.+. .++.++|||||||++|||++|+.||........ ..... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~----~~~~~~~~ 231 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKL----KGPPYSPL 231 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHh----cCCCCCCc
Confidence 0 0112356679999998763 478999999999999999999999976432111 11100 0000000
Q ss_pred ----------------------------------cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 ----------------------------------KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ----------------------------------~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...+..+. ..........+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00000111 1112234457889999999999999999999986
No 354
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-33 Score=275.01 Aligned_cols=260 Identities=22% Similarity=0.372 Sum_probs=201.2
Q ss_pred HHHHHHHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeee
Q 002346 573 IEVLRQVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (933)
Q Consensus 573 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 650 (933)
++++..+++ +.||+|+|+.|-.+ .+.+|.+||||++.+. ....+.+..+|++++.+. .|+||+++++||++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 455555543 67999999999887 6778999999999876 345567899999999999 49999999999999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC---cEE
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAK 727 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~k 727 (933)
+...|||||.|.||+|..+++++ ..+++.++.++.++|+.||.+||. +||.|||+||+|||-.... -+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cceEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCcee
Confidence 99999999999999999999772 558999999999999999999999 9999999999999986543 489
Q ss_pred EecccccccCCCC------CceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCch-
Q 002346 728 VADFGLVKNAPDG------KYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDD- 795 (933)
Q Consensus 728 l~DfGla~~~~~~------~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~- 795 (933)
|+||.+....... ....-...+|+..|||||+.. ...|+.++|.|||||++|-|+.|.+||.+.-..+
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 9999886532211 111123468999999999762 2358889999999999999999999997643211
Q ss_pred --------hhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHH-HHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 796 --------RAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESI-YRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 796 --------~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~-~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..-....+..+......+ .+.+|..+ .+..+++...+..++.+|.++.+++.
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeF----------PdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEF----------PDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcC----------ChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111111222222222222 23344433 44568999999999999999999876
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.4e-32 Score=305.19 Aligned_cols=263 Identities=22% Similarity=0.347 Sum_probs=194.6
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------ 651 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 651 (933)
+.++|.+.+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 357899999999999999999964 5789999999876543344456788999999999999999999998654
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
...++|+||+. .+|.+++. ..+++.++..++.|+++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred ceEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeC
Confidence 34689999995 46766541 358899999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH------
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR------ 804 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~------ 804 (933)
|+++..... .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 162 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 162 GLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred CCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 998754332 123467889999999866 468899999999999999999999998653322111100000
Q ss_pred --HHhhccCCCCcccC--CCCCCCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 805 --RVLISKENIPKAID--PNLNLDE---ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 805 --~~~~~~~~~~~~~d--~~l~~~~---~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... .......+. +...... ........+.+++.+|++.||++||+++++++
T Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 238 FVQKLE-DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHhc-ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 000000000 0000000 00011235779999999999999999999986
No 356
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.1e-32 Score=302.60 Aligned_cols=269 Identities=24% Similarity=0.369 Sum_probs=200.4
Q ss_pred HHHHHHHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC
Q 002346 573 IEVLRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (933)
Q Consensus 573 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 651 (933)
...+..++++|++.+.||+|+||.||+|. ..+++.||+|++..........+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 34566778999999999999999999995 45789999999976533334456788999999999999999999988643
Q ss_pred ------ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 652 ------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 652 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
...+++++++ +++|.+++.. ..+++..+..++.|+++|++|||+ .+|+||||||+||++++++.
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCC
Confidence 3467888887 7899888743 358999999999999999999999 89999999999999999999
Q ss_pred EEEecccccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002346 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFR 804 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~ 804 (933)
+||+|||+++..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||......... .....
T Consensus 159 ~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~ 232 (345)
T cd07877 159 LKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL--KLILR 232 (345)
T ss_pred EEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHH
Confidence 999999998754332 233568899999998765 56788999999999999999999999654332111 11000
Q ss_pred HHhhccCCCCccc------------C--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 805 RVLISKENIPKAI------------D--PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 805 ~~~~~~~~~~~~~------------d--~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
........+...+ + +..............+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000000000000 0 000000000011235779999999999999999999986
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.2e-32 Score=304.79 Aligned_cols=264 Identities=26% Similarity=0.356 Sum_probs=201.7
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCc-----eeE
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-----ERL 655 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 655 (933)
+|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999664 5899999998765433455678999999999999999999999988765 789
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
+||||++ ++|.+++.. ..++++..++.++.|+++||+|||+ .+|+||||||+||+++.++.++|+|||++.
T Consensus 81 lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 81 IVTELME-TDLHKVIKS-----PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred EEecchh-hhHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 9999997 588888854 2378999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCc--eeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-c-
Q 002346 736 NAPDGKY--SVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-K- 810 (933)
Q Consensus 736 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~- 810 (933)
....... .......+++.|+|||++.+. .++.++||||||+++|+|++|+.||......+... .+...... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~~ 228 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN---LIVEVLGTPSE 228 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH---HHHHhcCCCCh
Confidence 6654331 112334678999999999877 78999999999999999999999997654322111 11110000 0
Q ss_pred --------CCCCcccC---CC--CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 --------ENIPKAID---PN--LNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 --------~~~~~~~d---~~--l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......+. .. .............+.+++.+||+.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00000000 00 0000000112345789999999999999999999986
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=8.8e-33 Score=298.32 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=202.6
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 657 (933)
++|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688999999999999999965 4799999999876432 2334567889999999998 99999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++++|||++...
T Consensus 81 ~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRK-----YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 999999999999965 2369999999999999999999998 89999999999999999999999999998755
Q ss_pred CCCCc-------------------eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH
Q 002346 738 PDGKY-------------------SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH 798 (933)
Q Consensus 738 ~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~ 798 (933)
..... .......|+..|+|||+.....++.++||||||++++++++|+.||.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--- 229 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--- 229 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---
Confidence 43221 11223467899999999988889999999999999999999999997653211
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDM----GHAVN 857 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~----~evl~ 857 (933)
.+.........++..+ ...+.+++.+|++.+|++||++ .++++
T Consensus 230 ---~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKILKLEYSFPPNF-------------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHhcCCCCCCcc-------------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1111111111122111 2357799999999999999999 77764
No 359
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-32 Score=322.12 Aligned_cols=263 Identities=28% Similarity=0.477 Sum_probs=209.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC--------CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC
Q 002346 581 DNFSEANILGRGGFGVVYGGELP--------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING 651 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 651 (933)
++..+.+.||+|.||.|++|... ....||||.++..... .+.+.+..|+++|+.+ +|+||+.++|+|..+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 44455679999999999999542 1457999999877644 7788999999999999 699999999999999
Q ss_pred ceeEEEEeecCCCChhhHhhhcc---------cCCC--CCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWH---------DHGY--TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
+..++|+||+..|+|.++++..+ .... ..++..+.+.++.|||.|++||++ .++||||+.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEe
Confidence 99999999999999999998755 1111 238999999999999999999999 899999999999999
Q ss_pred cCCCcEEEecccccccCCCCCceeeccccc--ccCcccccccCCCCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhh
Q 002346 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAG--TFGYLAPEYAATGRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRA 797 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~ 797 (933)
+++..+||+|||+|+...+..+.....-.| ...|||||.+....|+.|+|||||||++||++| |..|+.+.....
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~-- 529 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE-- 529 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--
Confidence 999999999999999777665554333233 446999999999999999999999999999999 778886532111
Q ss_pred HHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhh
Q 002346 798 HLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVE 864 (933)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 864 (933)
.+..+.+. ...+.. ...+ ..++.++++.||+.+|++||++.++++.++..+.
T Consensus 530 ~l~~~l~~----G~r~~~--------P~~c---~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 530 ELLEFLKE----GNRMEQ--------PEHC---SDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHhc----CCCCCC--------CCCC---CHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 22222211 111111 1111 2467799999999999999999999999988543
No 360
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-32 Score=292.51 Aligned_cols=246 Identities=26% Similarity=0.415 Sum_probs=196.4
Q ss_pred cccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||.||++... +|+.||+|++..... .....+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999765 499999999876532 224467889999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc----
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY---- 742 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~---- 742 (933)
.+++... ..+++..+..++.|+++||+|||+ .+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9999652 368999999999999999999998 8999999999999999999999999999875443211
Q ss_pred ---eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCC
Q 002346 743 ---SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDP 819 (933)
Q Consensus 743 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 819 (933)
.......++..|+|||......++.++||||||+++||+++|+.||....+... ...........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~-- 224 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI------FQNILNGKIEWPEDV-- 224 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCCcCCCccc--
Confidence 122345688899999999888899999999999999999999999976543211 111111111111110
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 820 NLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 820 ~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
.....+.+++.+|++.+|++||++.++.+.|
T Consensus 225 ---------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 ---------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ---------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0124577999999999999999995555544
No 361
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-32 Score=295.35 Aligned_cols=263 Identities=23% Similarity=0.325 Sum_probs=202.0
Q ss_pred CccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|++.+.||+|++|.||++.. .+++.+|+|++............+.+|++++++++|+||+++++++..+...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56778999999999999965 47899999998776544445678889999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++ +|.+++... ...+++.++..++.|+++|++|||+ .+|+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 81 DT-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred CC-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 65 888888552 1468999999999999999999998 899999999999999999999999999987665433
Q ss_pred ceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-cC-CCCcccC
Q 002346 742 YSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-KE-NIPKAID 818 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~d 818 (933)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+.. ......... .. ......+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL---FKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCchHhcccchh
Confidence 122334678899999998766 7899999999999999999999999765432211 101010000 00 0000000
Q ss_pred ------------CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 ------------PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ------------~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..............++.+++.+|++.+|.+||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000111223456889999999999999999999986
No 362
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.7e-32 Score=294.66 Aligned_cols=264 Identities=26% Similarity=0.348 Sum_probs=197.3
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc---CCCcceeEEeEeeeCce-----
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV---RHRHLVALLGYCINGSE----- 653 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 653 (933)
|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++.++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999765 489999999976543333345677788777666 59999999999987776
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.+++|||+. ++|.+++.... ...+++..++.++.|+++||+|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 899999996 58988886522 2358999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhc-cCC
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLIS-KEN 812 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 812 (933)
+........ .....++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+....... ...
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 154 ARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKIFDVIGLPSEEE 229 (287)
T ss_pred ceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHHHHHcCCCChHh
Confidence 876544321 123357889999999998889999999999999999999999987644322 111111111000 000
Q ss_pred CC-------cccCCCCC--CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 IP-------KAIDPNLN--LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~~-------~~~d~~l~--~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+ ..+..... ......+....+.+++.+|++.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 00000000 00111123356679999999999999999999985
No 363
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.1e-32 Score=302.41 Aligned_cols=268 Identities=26% Similarity=0.331 Sum_probs=196.4
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-------
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------- 651 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 651 (933)
.++|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 47899999999999999999965 4689999999876543333345678999999999999999999987543
Q ss_pred -ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEec
Q 002346 652 -SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (933)
Q Consensus 652 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~D 730 (933)
...++||||+. +++...+... ...+++.++..++.|+++||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECc
Confidence 34689999996 4777776441 2468999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCce----------eecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHH
Q 002346 731 FGLVKNAPDGKYS----------VETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHL 799 (933)
Q Consensus 731 fGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~ 799 (933)
||+++........ ..+...|++.|+|||++.+. .++.++||||||+++|||++|++||...........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9998754332211 11234578899999987654 578999999999999999999999976544322111
Q ss_pred HHHHHHHhhcc-------CCCCccc----CCCCCCCh--hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 800 VTWFRRVLISK-------ENIPKAI----DPNLNLDE--ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 800 ~~~~~~~~~~~-------~~~~~~~----d~~l~~~~--~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ........ ..++... ........ ........+.+++.+|++.+|++||++.|++.
T Consensus 239 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 239 I--FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred H--HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1 11000000 0001000 00000000 00111246789999999999999999999875
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.1e-32 Score=296.28 Aligned_cols=247 Identities=25% Similarity=0.389 Sum_probs=195.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
+.|+..+.||+|+||.||+|.. .+++.||+|.+..... ......++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3467778899999999999965 4688999998865322 3344567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+. |++.+.+... ..++++.++..++.|++.|++|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 6888777431 2458899999999999999999998 899999999999999999999999999987554
Q ss_pred CCCceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
.. ....|++.|+|||++. .+.++.++|||||||++|||++|+.||......... .... ....+.
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~--~~~~~~ 233 (308)
T cd06634 167 PA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIA--QNESPA 233 (308)
T ss_pred Cc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH------HHHh--hcCCCC
Confidence 32 2346889999999874 356788999999999999999999998654321111 1111 111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
... ......+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~---------~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 234 LQS---------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred cCc---------ccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 111 112245779999999999999999999987
No 365
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.9e-32 Score=299.48 Aligned_cols=264 Identities=20% Similarity=0.266 Sum_probs=195.1
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
+.+.+|.|+++.||++.. +++.||||++..........+.+.+|+++++.++|+||+++++++...+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 445556666666666655 7999999999876445566788999999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc--
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY-- 742 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-- 742 (933)
+|.+++.... ...+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||.+........
T Consensus 85 ~l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 85 SCEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 9999997532 2358899999999999999999998 8999999999999999999999999998864432211
Q ss_pred ----eeecccccccCcccccccCC--CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh---ccC--
Q 002346 743 ----SVETRLAGTFGYLAPEYAAT--GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI---SKE-- 811 (933)
Q Consensus 743 ----~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~-- 811 (933)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||....... ........... ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCch
Confidence 01123457788999999865 358899999999999999999999997643211 11111100000 000
Q ss_pred -----CCCc----ccCCCCC---CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 -----NIPK----AIDPNLN---LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 -----~~~~----~~d~~l~---~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.... ..++... ...........+.+++.+||+.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000 0000000 00111222346789999999999999999999987
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.4e-32 Score=297.88 Aligned_cols=267 Identities=23% Similarity=0.328 Sum_probs=192.7
Q ss_pred CCccCCccccCCCeEEEEEEeC-C--CcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeC----ce
Q 002346 582 NFSEANILGRGGFGVVYGGELP-D--GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCING----SE 653 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 653 (933)
+|++.+.||+|+||.||++... . +..||+|++..........+.+.+|+.+++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999653 3 77999999875433333456788999999999 599999999875432 45
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++++||+. ++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred EEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 688899885 689988854 2568999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCCce---eecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHH---------
Q 002346 734 VKNAPDGKYS---VETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLV--------- 800 (933)
Q Consensus 734 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~--------- 800 (933)
++........ ......|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||............
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9865432211 1233578999999998765 46889999999999999999999999764321110000
Q ss_pred HHHHHHhhccC-CCCcccC--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 801 TWFRRVLISKE-NIPKAID--PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 801 ~~~~~~~~~~~-~~~~~~d--~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+......... .....+. +..............+.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000 0000000 000000000011245779999999999999999999875
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-31 Score=293.00 Aligned_cols=245 Identities=25% Similarity=0.406 Sum_probs=194.3
Q ss_pred CccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 583 FSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+++++.++|||++++++++.++...++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999999965 4688999999875432 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+. |++.+++... ..++++.++..++.|++.|++|||+ .+++||||+|+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~ 174 (313)
T cd06633 103 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA 174 (313)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCC
Confidence 95 6787777541 2468999999999999999999998 89999999999999999999999999988643321
Q ss_pred CceeecccccccCcccccccC---CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 741 KYSVETRLAGTFGYLAPEYAA---TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
....|+..|+|||++. .+.++.++|||||||++|||++|+.||......... . .... ...+...
T Consensus 175 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~---~---~~~~--~~~~~~~ 241 (313)
T cd06633 175 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---Y---HIAQ--NDSPTLQ 241 (313)
T ss_pred -----CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH---H---HHHh--cCCCCCC
Confidence 2346889999999874 456888999999999999999999998765322211 1 1111 1111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.. ...+.+++.+|++.+|.+||++.++++
T Consensus 242 ~~~~---------~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 242 SNEW---------TDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cccc---------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 134778999999999999999999986
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.4e-32 Score=302.21 Aligned_cols=259 Identities=23% Similarity=0.353 Sum_probs=198.6
Q ss_pred HhcCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCce----
Q 002346 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE---- 653 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 653 (933)
+.++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999664 68899999987653334445678889999999999999999998766554
Q ss_pred --eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 654 --RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 654 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
.++|+||+ +++|.+++.. ..+++.++..++.|+++|++|||+ .+|+||||||+||++++++.+||+||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccc
Confidence 89999999 6799998854 468999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCceeecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 732 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
|++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ..+....
T Consensus 163 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~---~~i~~~~--- 232 (343)
T cd07851 163 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL---KRIMNLV--- 232 (343)
T ss_pred ccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHhc---
Confidence 998865432 223467889999998865 36789999999999999999999999754332111 1110000
Q ss_pred CCCCccc----------------CCCC--CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 811 ENIPKAI----------------DPNL--NLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 811 ~~~~~~~----------------d~~l--~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...++.+ .... ............+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000 0000 000000112356789999999999999999999976
No 369
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9e-32 Score=292.82 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=193.8
Q ss_pred cCCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|++.+.||+|+||.||+|...+ ++.||||+++.... .....++..|+.++.+.. ||||+++++++..+...++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 568889999999999999997754 89999999876532 233456677887777774 999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+. +++.+.+... ..++++..+..++.|+++|++|||+ .++|+||||+|+||++++++.+||+|||++....
T Consensus 94 e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 94 ELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9984 5777766441 2368999999999999999999996 2589999999999999999999999999987654
Q ss_pred CCCceeecccccccCcccccccCCCC----CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGR----VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
.... .....+++.|+|||++.+.. ++.++||||||+++|||++|+.||...... . .......... .+
T Consensus 167 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~----~~~~~~~~~~--~~ 237 (296)
T cd06618 167 DSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-F----EVLTKILQEE--PP 237 (296)
T ss_pred CCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-H----HHHHHHhcCC--CC
Confidence 3221 12335788999999986553 788999999999999999999999653211 1 1111111111 11
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. +.... ....++.+++.+|++.+|++||++.++++
T Consensus 238 ~-~~~~~-------~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 238 S-LPPNE-------GFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred C-CCCCC-------CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 11000 12245789999999999999999999986
No 370
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.1e-32 Score=298.62 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=195.8
Q ss_pred hcCCcc-CCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCch------------hHHHHHHHHHHHHhcCCCcceeEE
Q 002346 580 TDNFSE-ANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNK------------GLSEFQAEIAVLTKVRHRHLVALL 645 (933)
Q Consensus 580 ~~~~~~-~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~ 645 (933)
.++|.. .+.||+|+||.||+|.. .+++.||||++........ ....+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456654 57799999999999964 4789999999875432210 012577899999999999999999
Q ss_pred eEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc
Q 002346 646 GYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (933)
Q Consensus 646 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~ 725 (933)
+++..++..++||||++ |+|.+++.. ...+++.....++.|+++||+|||+ .+|+||||+|+||+++.++.
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDR-----KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGI 157 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCC
Confidence 99999999999999996 699998854 2458899999999999999999998 89999999999999999999
Q ss_pred EEEecccccccCCCCC-------------ceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCC
Q 002346 726 AKVADFGLVKNAPDGK-------------YSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDT 791 (933)
Q Consensus 726 ~kl~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~ 791 (933)
++|+|||++....... ........+++.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999987554111 0111223568899999998764 4689999999999999999999999765
Q ss_pred CCchhhHHHHHHHHHhhcc--CCCCccc--------CCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 792 MPDDRAHLVTWFRRVLISK--ENIPKAI--------DPNLNL--DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~--~~~~~~~--------d~~l~~--~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+.+. ...+....... ..++... ...... ..........+.+++.+|++.+|++||+++|++.
T Consensus 238 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 238 NEIDQ---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CHHHH---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 43221 11111111000 0011100 000000 0000111345779999999999999999999986
No 371
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.5e-32 Score=303.83 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=212.9
Q ss_pred ecHHHHHHHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEe
Q 002346 571 ISIEVLRQVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYC 648 (933)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 648 (933)
..++.+..-++.|++.+.||+|.+|.||++ ..++++.+|+|+.... .+..++...|..+++.. .|||++.++|++
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~---~d~deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT---EDEEEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC---ccccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 345555556788999999999999999999 4568999999988765 33346788899999888 699999999998
Q ss_pred ee-----CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC
Q 002346 649 IN-----GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (933)
Q Consensus 649 ~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~ 723 (933)
.. +++.|||||||.+|+..+.++... ...+.|..+..|++++++|+.|||. ..++|||||-.|||++.+
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTEN 159 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEecc
Confidence 63 678999999999999999998754 4679999999999999999999998 899999999999999999
Q ss_pred CcEEEecccccccCCCCCceeecccccccCcccccccCCC-----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH
Q 002346 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATG-----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH 798 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~ 798 (933)
+.||++|||++....... .......|||.|||||++... .|+..+|+||||++..||.-|.+|+.+..|....
T Consensus 160 ~~VKLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL- 237 (953)
T KOG0587|consen 160 AEVKLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL- 237 (953)
T ss_pred CcEEEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh-
Confidence 999999999988765433 223446899999999998533 4677899999999999999999999887664321
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..++..-.|.+. .......++.++|..|+.+|.++||++.++++
T Consensus 238 ------------F~IpRNPPPkLk---rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 ------------FLIPRNPPPKLK---RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------------ccCCCCCCcccc---chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 112222223332 23345567889999999999999999998875
No 372
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1.1e-31 Score=290.28 Aligned_cols=264 Identities=24% Similarity=0.357 Sum_probs=197.1
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEEee
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
|++.+.||+|+||.||+|... +++.||+|++...... .......+|+..+.+++ |+||+++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 567889999999999999764 5789999998765322 22334567999999998 99999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
+ +|+|.+++.... ...+++.++..++.|+++||+|||+ ++++|+||+|+||++++++.++|+|||++......
T Consensus 80 ~-~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 80 M-EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred C-CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9 889999886522 2468999999999999999999998 89999999999999999999999999998765432
Q ss_pred CceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHH-H---------HHHHHhhc
Q 002346 741 KYSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLV-T---------WFRRVLIS 809 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~-~---------~~~~~~~~ 809 (933)
.. .....|+..|+|||++. ...++.++|+||||+++|||++|+.||......+..... . |......
T Consensus 153 ~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (283)
T cd07830 153 PP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL- 229 (283)
T ss_pred CC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh-
Confidence 21 23346888999999874 445789999999999999999999999765432221100 0 0000000
Q ss_pred cCCCCcccCCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 810 KENIPKAIDPNLNL--DEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 810 ~~~~~~~~d~~l~~--~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.......+...... ..........+.+++.+|++.+|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000011000000 0000011356889999999999999999999976
No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=8.8e-32 Score=298.78 Aligned_cols=264 Identities=23% Similarity=0.352 Sum_probs=192.6
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-------
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------- 651 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 651 (933)
..+|++.+.||.|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 36899999999999999999954 568999999986653 34457788999999999999999999776543
Q ss_pred -------ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec-CC
Q 002346 652 -------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DD 723 (933)
Q Consensus 652 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~-~~ 723 (933)
...++||||++ ++|.+++.. ..+++..++.++.|+++|++|||+ .+|+||||||+||+++ ++
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~ 151 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTED 151 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCC
Confidence 35789999996 589888743 458899999999999999999998 8999999999999997 45
Q ss_pred CcEEEecccccccCCCCCce--eecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHH
Q 002346 724 MRAKVADFGLVKNAPDGKYS--VETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLV 800 (933)
Q Consensus 724 ~~~kl~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~ 800 (933)
+.+|++|||++......... ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||....+......
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~- 230 (342)
T cd07854 152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL- 230 (342)
T ss_pred ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-
Confidence 67899999998754322111 1122357889999997654 5678899999999999999999999976543221111
Q ss_pred HHHHHHhhcc--------CCCCccc-----CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 801 TWFRRVLISK--------ENIPKAI-----DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 801 ~~~~~~~~~~--------~~~~~~~-----d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
......... ...+... .+.............++.+++.+|++.+|++||++.++++
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 231 -ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred -HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000 0000000 0000000000012245779999999999999999999986
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=1.2e-31 Score=289.90 Aligned_cols=262 Identities=26% Similarity=0.359 Sum_probs=199.6
Q ss_pred CccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|+..+.||+|+||.||+|... +++.||+|++..........+.+..|+.++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999664 5899999999876433444567889999999999999999999999999999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
+ ++|.+++.... ..+++.++..++.|+++||+|||+ .+|+||||+|+||++++++.+||+|||.++......
T Consensus 81 ~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 81 D-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred C-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 7 59999996521 468999999999999999999999 899999999999999999999999999987654432
Q ss_pred ceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc--------CC
Q 002346 742 YSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK--------EN 812 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~ 812 (933)
. ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+. ...+....... ..
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 153 R-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred c-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhcc
Confidence 1 12233567889999998766 789999999999999999999999976432211 11111100000 00
Q ss_pred C---CcccCCCCCCC---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 813 I---PKAIDPNLNLD---EETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 813 ~---~~~~d~~l~~~---~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+ ...+ +..... .........+.+++.+|++.+|++||++.+++.
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 229 LPDYKPTF-PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccc-cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0000 000000 000111346889999999999999999999986
No 375
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=1.4e-31 Score=283.80 Aligned_cols=238 Identities=28% Similarity=0.407 Sum_probs=193.8
Q ss_pred cccCCCeEEEEEEeC-CCcEEEEEEeccccCC-chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCCh
Q 002346 589 LGRGGFGVVYGGELP-DGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666 (933)
Q Consensus 589 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 666 (933)
||+|+||.||++... +++.||+|.+...... ......+..|+.++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999654 5899999998765432 23466889999999999999999999999999999999999999999
Q ss_pred hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeec
Q 002346 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 667 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
.+++.. ...+++..+..++.|+++|+.|||+ .+++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~ 151 (250)
T cd05123 81 FSHLSK-----EGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTN 151 (250)
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCC-ccc
Confidence 999965 2358999999999999999999998 8999999999999999999999999999876544321 223
Q ss_pred ccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChh
Q 002346 747 RLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEE 826 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 826 (933)
...|+..|+|||...+...+.++|+||||+++||+++|+.||..... .. ...........++..+
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~---~~~~~~~~~~~~~~~~--------- 216 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KE---IYEKILKDPLRFPEFL--------- 216 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HH---HHHHHhcCCCCCCCCC---------
Confidence 45688999999999888889999999999999999999999965432 11 1122222111222211
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 827 TIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 827 ~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
...+.+++.+|+..||++||++.+
T Consensus 217 ----~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 ----SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ----CHHHHHHHHHHhcCCHhhCCCccc
Confidence 235679999999999999999954
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-32 Score=247.96 Aligned_cols=265 Identities=23% Similarity=0.313 Sum_probs=197.6
Q ss_pred CCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 582 NFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+|.-.++||+|.||+||||+ ..+++.||+|+++.+..++.......+|+.+++.++|.|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45567889999999999994 45689999999998876666667889999999999999999999999999999999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~ 740 (933)
|+ .+|..+... -.+.++.+.+..++.|+++|+.++|+ +.+.|||+||+|.+++.+|+.|++|||+++.++-.
T Consensus 83 cd-qdlkkyfds----lng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 83 CD-QDLKKYFDS----LNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred hh-HHHHHHHHh----cCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 94 477777643 34678999999999999999999999 89999999999999999999999999999977654
Q ss_pred CceeecccccccCcccccccCCCC-CCCccchHhHHHHHHHHHcCCCC-CCCCCCchhhHHHHHHHHHh-hccCCCCcc-
Q 002346 741 KYSVETRLAGTFGYLAPEYAATGR-VTTKIDVYAFGVVLMETITGRKA-LDDTMPDDRAHLVTWFRRVL-ISKENIPKA- 816 (933)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~~l~elltG~~p-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 816 (933)
-.. ...-+-|..|.+|.++.+.+ |+...|+||.||++.|+....+| |.+...++. +...++..- ..++.++.+
T Consensus 155 vrc-ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq--lkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 155 VRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ--LKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred eEe-eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH--HHHHHHHhCCCccccCCccc
Confidence 322 22335689999999987764 78899999999999999985544 444332222 222222111 111222211
Q ss_pred --cC----CCCCCChh----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 817 --ID----PNLNLDEE----TIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 817 --~d----~~l~~~~~----~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
-| |....... .......=.+++++.+.-+|.+|.+++++++
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11 00110000 0111122357788888889999999998876
No 377
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=1.3e-31 Score=285.90 Aligned_cols=252 Identities=21% Similarity=0.309 Sum_probs=195.6
Q ss_pred CCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccc---cCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 582 NFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESN---TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
+|.+.+.||+|+||.||++... .+..+++|.++.. ........++.+|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999553 3445566655432 22233345677899999999999999999999988899999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+++++|.+++..... ....+++.+++.++.|+++|++|||+ .+++|+||||+||+++. +.++|+|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999999865322 23579999999999999999999998 89999999999999975 56999999998765
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
..... ......|++.|+|||+..+..++.++|+||||+++|+|++|+.||..... ......... ...+. +
T Consensus 156 ~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~~~--~~~~~-~ 225 (260)
T cd08222 156 MGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRIVE--GPTPS-L 225 (260)
T ss_pred CCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHc--CCCCC-C
Confidence 43322 22335688999999999888889999999999999999999999965321 111111111 11111 1
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+ ......+.+++.+|++.+|++||++.++++
T Consensus 226 ~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 P---------ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred c---------chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1 122246779999999999999999999986
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.3e-31 Score=316.53 Aligned_cols=147 Identities=32% Similarity=0.472 Sum_probs=131.7
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
++|.+.+.||+|+||.||+|... +++.||||+++.... .......+.+|+.++..++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67899999999999999999654 689999999976432 2334567899999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
||+.+++|.+++.. ...+++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~-----~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI-----YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999965 2458899999999999999999998 899999999999999999999999999875
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-32 Score=281.73 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=198.4
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCC-----chhHHHHHHHHHHHHhcCCCcceeEEeEeee-C
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMG-----NKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-G 651 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 651 (933)
+.++|-.+++||+|||+.|||| ++...+.||||+-.....- ....+...+|.++-+.|.||.||++|+|+.- .
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 4568889999999999999999 6777889999986543211 1123457889999999999999999999875 4
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec---CCCcEEE
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKV 728 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~---~~~~~kl 728 (933)
+..+-|.|||+|-+|+-||+. ...+++.+++.|+.||+.||.||.+. +.+|||-|+||.|||+- .-|.+||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQ-----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQ-----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred ccceeeeeecCCCchhHHHHh-----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEe
Confidence 567899999999999999976 25689999999999999999999974 57999999999999995 3478999
Q ss_pred ecccccccCCCCCce------eecccccccCcccccccC----CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhH
Q 002346 729 ADFGLVKNAPDGKYS------VETRLAGTFGYLAPEYAA----TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAH 798 (933)
Q Consensus 729 ~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~ 798 (933)
.|||+++...++.+. .+...+||..|++||.+- ..+.+.|+||||.||++|+.+.|+.||...... .+
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--Qd 692 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QD 692 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HH
Confidence 999999976654432 234568999999999773 235789999999999999999999999764322 22
Q ss_pred HHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 799 LVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
+.... .++... .+ .+.+.. ....+...+|++|++.--++|.+..++..
T Consensus 693 ILqeN-TIlkAt-EV--qFP~KP-------vVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 693 ILQEN-TILKAT-EV--QFPPKP-------VVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHhhh-chhcce-ec--cCCCCC-------ccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 22111 111111 01 111111 11235668999999999999988777653
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=288.62 Aligned_cols=245 Identities=22% Similarity=0.392 Sum_probs=201.4
Q ss_pred CCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 586 ANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
.++||.|-||+||-| ..++|+.||||++.+.....+....+.+|+++++++.||.||.+-.-|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 478999999999999 4568999999999998888888889999999999999999999999999999999999999 56
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC---CcEEEecccccccCCCCC
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~DfGla~~~~~~~ 741 (933)
+..+.+-.. ..+.+++....-++.||+.||.|||. ++|+|+|+||+|||+.+. -.+||||||.|+..+...
T Consensus 648 DMLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 648 DMLEMILSS---EKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hHHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 777766542 23569999999999999999999998 999999999999999754 369999999999887644
Q ss_pred ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCC
Q 002346 742 YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNL 821 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 821 (933)
.....+|||.|.|||++....|...-|+||.||++|--+.|..||....+ +-+.++. .. +
T Consensus 722 --FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQIQN----Aa---------F 781 (888)
T KOG4236|consen 722 --FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQIQN----AA---------F 781 (888)
T ss_pred --hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhHHhhc----cc---------c
Confidence 33457999999999999999999999999999999999999999975321 1111111 10 0
Q ss_pred CCChhhHHHH-HHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 822 NLDEETIESI-YRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 822 ~~~~~~~~~~-~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
-....+|.++ .+.+++|...++..-.+|.+..+.+.
T Consensus 782 MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 782 MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 1122233333 24568999999999999999887654
No 381
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-33 Score=295.25 Aligned_cols=365 Identities=21% Similarity=0.280 Sum_probs=293.9
Q ss_pred CCCCCccccceEeCC---------------CCCEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCc-C
Q 002346 50 SSTGYCEWTGINCDN---------------SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANA-T 113 (933)
Q Consensus 50 ~~~~~C~w~gv~c~~---------------~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l-~ 113 (933)
+.++.|.-.=..|+. ...+..|++++|.|..+-+..|.++++|+++++.+|.++. ||.|+.. .
T Consensus 47 pa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sg 125 (873)
T KOG4194|consen 47 PATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRFGHESG 125 (873)
T ss_pred CCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-ccccccccc
Confidence 344556555566653 2367889999999998888899999999999999999994 5656554 5
Q ss_pred cCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEE
Q 002346 114 SLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLR 193 (933)
Q Consensus 114 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 193 (933)
+|+.|+|.+|.|+++....+..++.|+.||||.|.|+. .--..|..-.++++|+|++|.|+..-...|..+.+|..|.
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~--i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISE--IPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhc--ccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 69999999999999999999999999999999999988 2234667778999999999999999999999999999999
Q ss_pred ccCCcCCCCCCccccc-cccchhhcccccCCcccccccccCCccCcEEEecCCccCCCCCC-CCCCCCCCEEEccCCccc
Q 002346 194 LSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLT 271 (933)
Q Consensus 194 L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~L~L~~N~l~ 271 (933)
|++|+++...+..|.+ ++|+.|+|+.|.+...-.. .|.++++|+.|.|..|.+...-.. |..+.++++|+|+.|++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l-tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL-TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhh-hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 9999999444445552 7899999999998755222 477899999999999999876653 889999999999999999
Q ss_pred ccCcccccCCCCCCEEEccCccCccCCCCCC---CCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccC
Q 002346 272 GVVPASVISLPALLNISLQNNKLQGPYPLFP---SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSD 348 (933)
Q Consensus 272 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (933)
..--.++.+++.|+.|+||+|.+...-+..+ .+|++|+|++|+|....++.+.. ...+..
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~-----------------L~~Le~ 345 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRV-----------------LSQLEE 345 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHH-----------------HHHhhh
Confidence 8888889999999999999999987666533 48999999999998876543221 111222
Q ss_pred CCCCCCCCCCCCc-cccCCCceeEEEccCccccCcCch---hhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccC
Q 002346 349 SWEGNNACDGWPF-VTCSQGRIITINLANKLLAGNISP---AYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSN 424 (933)
Q Consensus 349 ~~~~~~~~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~ 424 (933)
+..+.|.+..+.+ .+..+.+|+.|||.+|.|++.|-+ .|.+|++|+.|+|.+|+|..+--.+|..|++|++|||.+
T Consensus 346 LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~ 425 (873)
T KOG4194|consen 346 LNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGD 425 (873)
T ss_pred hcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCC
Confidence 2223333333332 345578999999999999988764 688999999999999999966667999999999999999
Q ss_pred CcCcccCCCCC
Q 002346 425 NNLSGKVPDFG 435 (933)
Q Consensus 425 N~l~g~~p~~~ 435 (933)
|.+-..-|...
T Consensus 426 NaiaSIq~nAF 436 (873)
T KOG4194|consen 426 NAIASIQPNAF 436 (873)
T ss_pred Ccceeeccccc
Confidence 99988877644
No 382
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=253.76 Aligned_cols=209 Identities=27% Similarity=0.399 Sum_probs=172.4
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCce
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSE 653 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 653 (933)
++...++...+..||+|++|.|-+.+ ..+|+..|||++.... ..+..++..+|+.+..+. .+|.+|.+||.......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 34444555567789999999998874 4689999999998764 455567788888875554 79999999999999999
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.++.||.| .-+|+.+-.+.-.. ...+++...-+||..|.+||.|||+ +..+||||+||+|||++.+|++|+||||+
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~-g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKK-GGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhc-CCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999 45887776553333 3679999999999999999999999 48999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCC----CCCCCccchHhHHHHHHHHHcCCCCCCCC
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAAT----GRVTTKIDVYAFGVVLMETITGRKALDDT 791 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~SlG~~l~elltG~~p~~~~ 791 (933)
+....+.- ..+--.|...|||||.+.. ..|+-|+||||||+++.||.+++.||+..
T Consensus 196 sG~L~dSi--Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 196 SGYLVDSI--AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ceeehhhh--HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 87665432 1233478899999998853 36889999999999999999999999864
No 383
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=286.67 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=202.2
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCc-EEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGT-KIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.+++.+..||-||||.|=.++..... .+|+|.+++... +.++.+....|-.+|...+.|.||++|-.|.+....|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45556778999999999998775433 389998877543 4455677889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|-|-||.|+..+++ .+.++..+..-++..+++|++|||+ ++||+||+||+|.++|.+|.+||.|||.|+...
T Consensus 500 EaClGGElWTiLrd-----Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 500 EACLGGELWTILRD-----RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred HhhcCchhhhhhhh-----cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 99999999999966 3568899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
.+.. +..++|||.|.|||++.....+.++|.||||+++|||++|.+||....++....+.- .. + +.-.+|..+
T Consensus 572 ~g~K--TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL--kG-i-d~i~~Pr~I- 644 (732)
T KOG0614|consen 572 SGRK--TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL--KG-I-DKIEFPRRI- 644 (732)
T ss_pred cCCc--eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH--hh-h-hhhhccccc-
Confidence 7653 456799999999999999999999999999999999999999999887765433321 10 0 011112111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPD 851 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs 851 (933)
.....+++++....+|.+|..
T Consensus 645 ------------~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 645 ------------TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ------------chhHHHHHHHHHhcCcHhhhc
Confidence 134568999999999999985
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-32 Score=293.84 Aligned_cols=244 Identities=26% Similarity=0.367 Sum_probs=196.9
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 656 (933)
.++.|.....+|.|+|+.|-.+ ...+++..+||++.+.. .+-.+|+.++... +||||+++.+.+.++.+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence 4678888899999999999887 55678899999997762 2345677666666 79999999999999999999
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe-cCCCcEEEecccccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI-GDDMRAKVADFGLVK 735 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill-~~~~~~kl~DfGla~ 735 (933)
|||.+.++-+.+.+.. .+....++..|+.+++.|+.|||+ +||||||+||+|||+ ++.++++|+|||.++
T Consensus 394 v~e~l~g~ell~ri~~------~~~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRS------KPEFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWS 464 (612)
T ss_pred eehhccccHHHHHHHh------cchhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhh
Confidence 9999999988888755 222337888899999999999999 999999999999999 589999999999998
Q ss_pred cCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 736 NAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
..... ....+-|..|.|||++....|++++|+||||++||+|++|+.||.....+ ..+ ..++. .+...+
T Consensus 465 ~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei---~~~i~--~~~~s~ 533 (612)
T KOG0603|consen 465 ELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI---HTRIQ--MPKFSE 533 (612)
T ss_pred hCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH---HHhhc--CCcccc
Confidence 77664 12234578999999999999999999999999999999999999875433 111 11111 111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcC
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWK 867 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 867 (933)
......++|+.+||+.||.+||+|.++.. ++|.
T Consensus 534 -------------~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~------h~w~ 566 (612)
T KOG0603|consen 534 -------------CVSDEAKDLLQQLLQVDPALRLGADEIGA------HPWF 566 (612)
T ss_pred -------------ccCHHHHHHHHHhccCChhhCcChhhhcc------Ccch
Confidence 11235679999999999999999999976 6676
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-32 Score=264.74 Aligned_cols=268 Identities=23% Similarity=0.362 Sum_probs=199.0
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeee--------C
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--------G 651 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 651 (933)
..|.-..+||+|.||.||+|+. ..|+.||+|++-.+......-....+|++++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3455567899999999999954 467889998765443233333567899999999999999999988753 2
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
...|+||++|+. +|.-.|... ...++..++.+++.++..||.|+|+ ..|+|||+||.|+||+.++.+||+||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecc
Confidence 457999999965 888887441 2568999999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCCcee---ecccccccCcccccccCC-CCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 732 GLVKNAPDGKYSV---ETRLAGTFGYLAPEYAAT-GRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 732 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|+++.+....... .+..+-|..|.+||.+.+ ..|+++.|||..||++.||+||.+-+.+.......++....-...
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 9997554332211 244567999999998865 468999999999999999999999988776655544444322211
Q ss_pred hccCCCCcccC---------CCCCCChhh--HHHHH------HHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 808 ISKENIPKAID---------PNLNLDEET--IESIY------RVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 808 ~~~~~~~~~~d---------~~l~~~~~~--~~~~~------~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
. ++.+|.... +.+...... .+... +.++++..++..||.+|+++++++.
T Consensus 249 t-kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 T-KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred C-cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1 111222110 001111110 11111 4678999999999999999999986
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9e-32 Score=274.86 Aligned_cols=243 Identities=26% Similarity=0.384 Sum_probs=195.9
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCch-hHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNK-GLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 657 (933)
.+|..+.+||+|+||.|..|.. .+.+.+|||+++++..-+. ..+--+.|-+++... +-|.++++..+++..+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 4677889999999999999954 3567899999988754322 223345566677666 578999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
|||+.||+|--++++ .+.+-+..+.-+|.+||-||-+||+ ++||+||+|.+||++|.+|++||+|||+.+..
T Consensus 429 MEyvnGGDLMyhiQQ-----~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ-----VGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred EEEecCchhhhHHHH-----hcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence 999999999998876 3567788899999999999999999 99999999999999999999999999999855
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCccc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAI 817 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (933)
-.+.. .+..++|||.|+|||++..++|+..+|.|||||+||||+.|++||++..+++ .++.+....-..++.+
T Consensus 501 i~~~~-TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e------lF~aI~ehnvsyPKsl 573 (683)
T KOG0696|consen 501 IFDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE------LFQAIMEHNVSYPKSL 573 (683)
T ss_pred ccCCc-ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHccCcCcccc
Confidence 44332 2345799999999999999999999999999999999999999998754322 2333333333333322
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCC
Q 002346 818 DPNLNLDEETIESIYRVAELAGHCTAREPQQRPD 851 (933)
Q Consensus 818 d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs 851 (933)
..+.+.+....+.+.|.+|..
T Consensus 574 -------------SkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 574 -------------SKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -------------cHHHHHHHHHHhhcCCccccC
Confidence 245667888899999999973
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=272.70 Aligned_cols=263 Identities=23% Similarity=0.330 Sum_probs=202.7
Q ss_pred HHhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-C-C----cceeEEeEeee
Q 002346 578 QVTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-H-R----HLVALLGYCIN 650 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~ 650 (933)
..+.+|.+...+|+|+||.|-+. +...+..||||+++.- ....+...-|+++++++. + | -+|++.+|+..
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 34789999999999999999998 4445899999998754 334566788999999993 2 2 47888899999
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC--------
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-------- 722 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-------- 722 (933)
.++.++|+|.+ |-++.+++.. ++..+++...+..|++|+++++++||+ .+++|-|+||+|||+.+
T Consensus 163 rghiCivfell-G~S~~dFlk~---N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~ 235 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKE---NNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYN 235 (415)
T ss_pred cCceEEEEecc-ChhHHHHhcc---CCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEec
Confidence 99999999998 6799999954 556789999999999999999999999 89999999999999842
Q ss_pred ------------CCcEEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCC
Q 002346 723 ------------DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDD 790 (933)
Q Consensus 723 ------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~ 790 (933)
+..+||+|||.|....... ...+.|..|.|||++.+-.++.++||||+||+|+|++||..-|+.
T Consensus 236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred cCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 2459999999998655433 345778999999999999999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHhhcc----------------CC--CC---------cccCCCCCCC---hhhHHHHHHHHHHHHH
Q 002346 791 TMPDDRAHLVTWFRRVLISK----------------EN--IP---------KAIDPNLNLD---EETIESIYRVAELAGH 840 (933)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~----------------~~--~~---------~~~d~~l~~~---~~~~~~~~~~~~li~~ 840 (933)
....+ ++ ..+.+++... +. ++ ...++..+.. .....+...+.+|+++
T Consensus 312 Hen~E--HL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 312 HENLE--HL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred CCcHH--HH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 54222 22 1222222100 00 00 0011111100 0122345678999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 002346 841 CTAREPQQRPDMGHAVN 857 (933)
Q Consensus 841 cl~~~P~~RPs~~evl~ 857 (933)
|+..||.+|+|+.|++.
T Consensus 389 mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 389 MLEFDPARRITLREALS 405 (415)
T ss_pred HHccCccccccHHHHhc
Confidence 99999999999999986
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=7.6e-31 Score=275.41 Aligned_cols=221 Identities=20% Similarity=0.248 Sum_probs=175.7
Q ss_pred CCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCChhhHh
Q 002346 592 GGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL 670 (933)
Q Consensus 592 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 670 (933)
|.||.||++. ..+++.||+|++.... .+.+|...+....||||+++++++......++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8999999994 4578999999987652 2344555556667999999999999999999999999999999998
Q ss_pred hhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeeccccc
Q 002346 671 FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG 750 (933)
Q Consensus 671 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g 750 (933)
... ..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.++++|||.+....... ....+
T Consensus 77 ~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~ 144 (237)
T cd05576 77 SKF-----LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAV 144 (237)
T ss_pred HHh-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCc
Confidence 652 358999999999999999999998 899999999999999999999999999876544321 22356
Q ss_pred ccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHH
Q 002346 751 TFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIES 830 (933)
Q Consensus 751 t~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 830 (933)
+..|+|||++....++.++||||+|+++|||++|+.|+........ ......++. . .
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------~~~~~~~~~----~---------~ 201 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------THTTLNIPE----W---------V 201 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------cccccCCcc----c---------C
Confidence 7789999999888899999999999999999999988754211000 000001111 1 1
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHH
Q 002346 831 IYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 831 ~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
...+.+++.+|++.||++||++.+
T Consensus 202 ~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 202 SEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCc
Confidence 235779999999999999999743
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.4e-30 Score=289.70 Aligned_cols=268 Identities=21% Similarity=0.279 Sum_probs=183.8
Q ss_pred hcCCccCCccccCCCeEEEEEEe-----------------CCCcEEEEEEeccccCCc------------hhHHHHHHHH
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-----------------PDGTKIAVKRMESNTMGN------------KGLSEFQAEI 630 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~------------~~~~~~~~E~ 630 (933)
.++|++.++||+|+||.||+|.. .+++.||||++....... ...+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999953 245689999986542110 0112344577
Q ss_pred HHHHhcCCCcc-----eeEEeEeee--------CceeEEEEeecCCCChhhHhhhcccC-------------------CC
Q 002346 631 AVLTKVRHRHL-----VALLGYCIN--------GSERLLVYEYMPRGTLAQHLFEWHDH-------------------GY 678 (933)
Q Consensus 631 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~ 678 (933)
.++.+++|.++ ++++++|.. .+..++||||+++++|.++++..... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77888876554 677787753 35679999999999999998752110 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeecccccccCccccc
Q 002346 679 TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758 (933)
Q Consensus 679 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE 758 (933)
..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++....+.........+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 235788899999999999999998 89999999999999999999999999999755433222122234588999999
Q ss_pred ccCCCC--------------------C--CCccchHhHHHHHHHHHcCCC-CCCCCCCch------hhHHHHHHHHHhhc
Q 002346 759 YAATGR--------------------V--TTKIDVYAFGVVLMETITGRK-ALDDTMPDD------RAHLVTWFRRVLIS 809 (933)
Q Consensus 759 ~~~~~~--------------------~--~~~~Dv~SlG~~l~elltG~~-p~~~~~~~~------~~~~~~~~~~~~~~ 809 (933)
.+.... + ..+.||||+||++|||++|.. |+....... ..++..|... ...
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-~~~ 459 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-KGQ 459 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh-ccc
Confidence 875332 1 134799999999999999985 665321110 1111122111 000
Q ss_pred cCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHHHhhhhhhcCC
Q 002346 810 KENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREP---QQRPDMGHAVNVLGPLVEQWKP 868 (933)
Q Consensus 810 ~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P---~~RPs~~evl~~L~~~~~~~~~ 868 (933)
...+. .+|. ......+++.+++..+| .+|+|++|+++ ++|..
T Consensus 460 ~~~~~-~~d~----------~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~------Hp~f~ 504 (507)
T PLN03224 460 KYDFS-LLDR----------NKEAGWDLACKLITKRDQANRGRLSVGQALS------HRFFL 504 (507)
T ss_pred CCCcc-cccc----------cChHHHHHHHHHhccCCCCcccCCCHHHHhC------CCCcC
Confidence 00000 0110 11346689999999766 68999999986 67664
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=290.17 Aligned_cols=244 Identities=28% Similarity=0.427 Sum_probs=188.9
Q ss_pred cCCccccCCCe-EEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEEEeecC
Q 002346 585 EANILGRGGFG-VVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 585 ~~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
..+.+|.|+.| .||+|.. +|+.||||++-.+ ..+..++|+..++.- +|||||++++.-.++...|++.|.|
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 34568999987 7899998 7899999988543 345678999999998 6999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC---C--CcEEEecccccccC
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---D--MRAKVADFGLVKNA 737 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~---~--~~~kl~DfGla~~~ 737 (933)
..+|.+++... ........-...+.+..|++.||+|||+ .+|||||+||+||||+. + .+++|+|||+++..
T Consensus 586 ~~sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 ACSLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hhhHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 56999999763 1111111114457789999999999999 89999999999999975 3 47999999999987
Q ss_pred CCCCcee--ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcC-CCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 738 PDGKYSV--ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITG-RKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 738 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
..+.... .....||.+|+|||++....-+.++||||+||++|+.++| .+||.+....+. -++.....+.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--------NIl~~~~~L~ 733 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--------NILTGNYTLV 733 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--------hhhcCcccee
Confidence 7665433 3456899999999999988888999999999999999997 799986533211 1111122111
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..- + .. +. +..++|.+|++++|..||++.+|+.
T Consensus 734 ~L~-~----~~---d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 HLE-P----LP---DC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eec-c----Cc---hH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 0 01 11 5669999999999999999999975
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=5.2e-30 Score=298.15 Aligned_cols=268 Identities=22% Similarity=0.246 Sum_probs=172.7
Q ss_pred hcCCccCCccccCCCeEEEEEEeC-C----CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeE------e
Q 002346 580 TDNFSEANILGRGGFGVVYGGELP-D----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGY------C 648 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~ 648 (933)
.++|.+.+.||+|+||.||+|... + +..||||++..... .+.+..| .+....+.+++.++.. +
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 568999999999999999999664 4 68999998764321 1111111 1112222222222211 2
Q ss_pred eeCceeEEEEeecCCCChhhHhhhcccC---------------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCC
Q 002346 649 INGSERLLVYEYMPRGTLAQHLFEWHDH---------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713 (933)
Q Consensus 649 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 713 (933)
..+...++||||+.+++|.+++...... .........+..++.|+++||+|||+ ++|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcC
Confidence 4567889999999999999998652100 00112234466899999999999998 89999999
Q ss_pred CCCcEEecC-CCcEEEecccccccCCCCCceeecccccccCcccccccCCC----------------------CCCCccc
Q 002346 714 KPSNILIGD-DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATG----------------------RVTTKID 770 (933)
Q Consensus 714 k~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 770 (933)
||+|||++. ++.+||+|||+++....+.........|++.|+|||.+... .+..++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 57999999999986654443444556899999999965321 2345679
Q ss_pred hHhHHHHHHHHHcCCCCCCCCCCc-------hhhHHHHHHHHHhhccCCCCcccCCCCCCChhh-HHHHHHHHHHHHHcc
Q 002346 771 VYAFGVVLMETITGRKALDDTMPD-------DRAHLVTWFRRVLISKENIPKAIDPNLNLDEET-IESIYRVAELAGHCT 842 (933)
Q Consensus 771 v~SlG~~l~elltG~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~~li~~cl 842 (933)
||||||++|||+++..+++..... ...+...|..... ....+.+...... ........+++.+|+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVE-------PRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhc-------cccchhhhhhhhhccccchHHHHHHHHHc
Confidence 999999999999987665421100 0001111111100 0000000000000 000123458999999
Q ss_pred cCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 843 AREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 843 ~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
+.||++|||+.|+++ ++|...
T Consensus 435 ~~dP~kR~ta~e~L~------Hpff~~ 455 (566)
T PLN03225 435 RFKGRQRISAKAALA------HPYFDR 455 (566)
T ss_pred cCCcccCCCHHHHhC------CcCcCC
Confidence 999999999999987 677654
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-30 Score=256.87 Aligned_cols=248 Identities=23% Similarity=0.390 Sum_probs=200.9
Q ss_pred cCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 657 (933)
.+|..+++||+|+|+.|..+++ ++.+.||+|+++++-... +..+..+.|-.+..+. +||.+|-+..++..+...++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 5788999999999999999965 467889999998875443 4467788898888887 799999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
.||+.||+|--++++ ...++++.++-+..+|.-||.|||+ +|||.||+|.+|||+|..|++|+.|+|+.+.-
T Consensus 330 ieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999777755 3569999999999999999999999 99999999999999999999999999998854
Q ss_pred CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCc-hhhHHHHH-HHHHhhccCCCCc
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPD-DRAHLVTW-FRRVLISKENIPK 815 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 815 (933)
-... ..+..++|||.|.|||.+.+..|....|.|++||+++||+.|+.||+-...+ ......++ ++-++.....+|+
T Consensus 402 l~~g-d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr 480 (593)
T KOG0695|consen 402 LGPG-DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR 480 (593)
T ss_pred CCCC-cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc
Confidence 3322 2345679999999999999999999999999999999999999999843211 11111222 2333333344444
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCC
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRP 850 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RP 850 (933)
.+. .+...+++.-+++||.+|.
T Consensus 481 sls-------------vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 481 SLS-------------VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred eee-------------hhhHHHHHHhhcCCcHHhc
Confidence 332 2344788889999999986
No 393
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=1.4e-32 Score=293.54 Aligned_cols=315 Identities=24% Similarity=0.351 Sum_probs=254.3
Q ss_pred CCEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceecccccccc--CCCCCcccCCCCCCEEE
Q 002346 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFT--SVPTGCFDGLTNLQVLS 143 (933)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~ 143 (933)
.+++.|.|...+|. .+|.+++.+.+|++|.+++|++..+.-.+..|+.|+.+++..|++. +||++ +-.+..|.+||
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~d-iF~l~dLt~lD 109 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTD-IFRLKDLTILD 109 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCch-hcccccceeee
Confidence 47999999999998 8999999999999999999999987778999999999999999998 68887 55799999999
Q ss_pred ccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccccC
Q 002346 144 LSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQL 222 (933)
Q Consensus 144 Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~ 222 (933)
||+|++.. .|..+.+-+++-+|+||+|+|..+....|.+|+.|-+||||+|++. .+|..+-. ..|+.|.|++|.+
T Consensus 110 LShNqL~E---vP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 110 LSHNQLRE---VPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred cchhhhhh---cchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChh
Confidence 99999998 8999999999999999999998887778899999999999999998 77777655 6799999999988
Q ss_pred CcccccccccCCccCcEEEecCCcc--CCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCC-
Q 002346 223 GLSGTLDVLSGMTQLRQVWLHKNQF--TGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP- 299 (933)
Q Consensus 223 ~~~~~~~~l~~l~~L~~L~L~~N~l--~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p- 299 (933)
..... ..+-.+++|+.|++++.+- ...++++.++.+|..+|||.|.|. .+|+.+.++++|+.|+||+|+++..--
T Consensus 186 ~hfQL-rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~ 263 (1255)
T KOG0444|consen 186 NHFQL-RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMT 263 (1255)
T ss_pred hHHHH-hcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeecc
Confidence 65433 2355678899999998764 446668999999999999999999 999999999999999999999985322
Q ss_pred -CCCCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCcc
Q 002346 300 -LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKL 378 (933)
Q Consensus 300 -~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~ 378 (933)
..+.+++.|.||.|.++. +|..++.+++|+.|++.+|+
T Consensus 264 ~~~W~~lEtLNlSrNQLt~-----------------------------------------LP~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 264 EGEWENLETLNLSRNQLTV-----------------------------------------LPDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred HHHHhhhhhhccccchhcc-----------------------------------------chHHHhhhHHHHHHHhccCc
Confidence 235688999999998854 45555555666666666555
Q ss_pred ccC-cCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCccc
Q 002346 379 LAG-NISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGK 430 (933)
Q Consensus 379 l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~ 430 (933)
++- .||..||.|..|+.+..++|+|. .+|+.++.+.+|+.|.|++|.|-..
T Consensus 303 L~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTL 354 (1255)
T KOG0444|consen 303 LTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITL 354 (1255)
T ss_pred ccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeec
Confidence 542 25555666666666666666555 5566666666666666666655543
No 394
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.9e-29 Score=262.60 Aligned_cols=239 Identities=29% Similarity=0.445 Sum_probs=192.0
Q ss_pred CCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCChhhHhh
Q 002346 593 GFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF 671 (933)
Q Consensus 593 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 671 (933)
+||.||+|... +++.||+|++........ .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999765 589999999876543221 6789999999999999999999999999999999999999999999986
Q ss_pred hcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeecccccc
Q 002346 672 EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGT 751 (933)
Q Consensus 672 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt 751 (933)
.. ..+++..++.++.+++++++|||+ .+++|+||+|+||++++++.++|+|||.+....... ......++
T Consensus 80 ~~-----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~ 149 (244)
T smart00220 80 KR-----GRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGT 149 (244)
T ss_pred hc-----cCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCC
Confidence 52 228899999999999999999999 899999999999999999999999999988665432 22345688
Q ss_pred cCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHH
Q 002346 752 FGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESI 831 (933)
Q Consensus 752 ~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 831 (933)
..|++||......++.++|||++|+++|++++|..||..... ......+.. ........ .. ....
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~---~~~~~~~~---~~-------~~~~ 214 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIG---KPKPPFPP---PE-------WKIS 214 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHh---ccCCCCcc---cc-------ccCC
Confidence 899999999888899999999999999999999999976321 111111111 11110000 00 0022
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 832 YRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 832 ~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.++.+++.+|+..+|++||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 46789999999999999999999986
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.1e-31 Score=254.44 Aligned_cols=267 Identities=21% Similarity=0.334 Sum_probs=197.3
Q ss_pred ccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC-----ceeEEE
Q 002346 584 SEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SERLLV 657 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv 657 (933)
+..+.||-|+||.||.+.. .+|+.||.|++..-...-...+++.+|++++...+|.|++..++...-. .+.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3457899999999999844 5799999999876544445567899999999999999999988876533 356788
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
+|.| ..+|...+-. ...++-..+.-+++||++||.|||+ .+|.||||||.|.|++.+...||+|||+++.-
T Consensus 136 TELm-QSDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHH-Hhhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence 8888 4577776633 3668888999999999999999999 89999999999999999999999999999976
Q ss_pred CCCCceeecccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHH---------HHHHh
Q 002346 738 PDGKYSVETRLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTW---------FRRVL 807 (933)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~---------~~~~~ 807 (933)
..++....+.-+-|..|.|||.+++. .|+.+.||||.||++.||+.++.-|....|-...+++.. ++...
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 65554445555678899999999875 689999999999999999999988887666444333211 11111
Q ss_pred hccC--CCCccc-CCCCC---CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 808 ISKE--NIPKAI-DPNLN---LDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 808 ~~~~--~~~~~~-d~~l~---~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
+... -++... .|.+. .-....+.-.+...+...++..||++|.+.++.+..+
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0000 000000 01110 0000111122345777889999999999999887654
No 396
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-31 Score=281.36 Aligned_cols=342 Identities=19% Similarity=0.216 Sum_probs=254.2
Q ss_pred CCCEEEEEecCCCCccccCccccCCcccceeecccccccccCC-CccCcCcCceeccccccccCCCCCcccCCCCCCEEE
Q 002346 65 SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLS 143 (933)
Q Consensus 65 ~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 143 (933)
..+++.+++..|.|+ .+|...+...+|+.|+|.+|.|+.+-. ++.-++.|+.||||.|.|+.++...|..-.++++|+
T Consensus 101 l~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~ 179 (873)
T KOG4194|consen 101 LPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLN 179 (873)
T ss_pred CCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEe
Confidence 457888888888887 677777777778888888888887665 688888888888888888888888888888888888
Q ss_pred ccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccccC
Q 002346 144 LSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQL 222 (933)
Q Consensus 144 Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~ 222 (933)
|++|+|+. .-...|.++.+|..|.|++|+++...+..|.+|++|+.|+|..|+|.-.---.|.. .+++.|.|..|.+
T Consensus 180 La~N~It~--l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I 257 (873)
T KOG4194|consen 180 LASNRITT--LETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDI 257 (873)
T ss_pred eccccccc--cccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCc
Confidence 88888887 45578888888888888888888888888888888888888888886221333332 5677788887776
Q ss_pred CcccccccccCCccCcEEEecCCccCCCCC-CCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCC
Q 002346 223 GLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF 301 (933)
Q Consensus 223 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 301 (933)
.--. ..+|-++.+++.|+|..|++...-. .+.++++|+.|+||+|.|....++++.-.++|++|+|++|+++...+..
T Consensus 258 ~kL~-DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~s 336 (873)
T KOG4194|consen 258 SKLD-DGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGS 336 (873)
T ss_pred cccc-CcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhH
Confidence 5222 2356677888888888888876554 3677888888888888888777777777788888888888887655543
Q ss_pred ---CCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCC---CccccCCCceeEEEcc
Q 002346 302 ---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGW---PFVTCSQGRIITINLA 375 (933)
Q Consensus 302 ---~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---p~~~~~l~~L~~L~Ls 375 (933)
++.|+.|.|++|++..+....+. +....-.+++..|.....+ ...+..++.|+.|.|.
T Consensus 337 f~~L~~Le~LnLs~Nsi~~l~e~af~----------------~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~ 400 (873)
T KOG4194|consen 337 FRVLSQLEELNLSHNSIDHLAEGAFV----------------GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLT 400 (873)
T ss_pred HHHHHHhhhhcccccchHHHHhhHHH----------------HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeec
Confidence 35667777777777554322111 0111112233333322111 2234457899999999
Q ss_pred CccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcC
Q 002346 376 NKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427 (933)
Q Consensus 376 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l 427 (933)
+|+|..+.-..|.++..||.|||.+|-|..+-|.+|..| .|+.|-+..-.|
T Consensus 401 gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 401 GNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred CceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 999997666799999999999999999998999999999 899988876554
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.4e-29 Score=268.46 Aligned_cols=208 Identities=26% Similarity=0.411 Sum_probs=176.3
Q ss_pred cCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.-|..++.||-|+||+|..++ .++...||.|.+++... ...+....+.|..||..-..+-||++|..|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 346678999999999999994 44567889999887643 3345667889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc--
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-- 736 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~-- 736 (933)
||++||++-..|.+ .+-+.+.-++-++.++..|+++.|. .|+|||||||+|||||.+|++||.|||+..-
T Consensus 709 dYIPGGDmMSLLIr-----mgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR-----MGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred eccCCccHHHHHHH-----hccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccce
Confidence 99999999999866 3568888899999999999999998 8999999999999999999999999999642
Q ss_pred -------CCCCCce--------------------------------eecccccccCcccccccCCCCCCCccchHhHHHH
Q 002346 737 -------APDGKYS--------------------------------VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVV 777 (933)
Q Consensus 737 -------~~~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~ 777 (933)
+..++.. .....+||+.|+|||++....|+.-+|.||.||+
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 2111100 0012469999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCchh
Q 002346 778 LMETITGRKALDDTMPDDR 796 (933)
Q Consensus 778 l~elltG~~p~~~~~~~~~ 796 (933)
||||+.|+.||....+.+.
T Consensus 861 l~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred HHHHhhCCCCccCCCCCcc
Confidence 9999999999988776543
No 398
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=1.2e-31 Score=286.62 Aligned_cols=319 Identities=24% Similarity=0.280 Sum_probs=276.4
Q ss_pred CCEEEEEecCCCCccccCccccCCcccceeecccccc--cccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEE
Q 002346 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNI--AGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLS 143 (933)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l--~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 143 (933)
..+..|.+++|+|. .+-.+++.|+.|+.+++..|++ +|+++.+..+..|+.||||+|+++..|.+ +...+++-+|+
T Consensus 55 qkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~-LE~AKn~iVLN 132 (1255)
T KOG0444|consen 55 QKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTN-LEYAKNSIVLN 132 (1255)
T ss_pred hhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchh-hhhhcCcEEEE
Confidence 36888999999998 6777899999999999999998 56777999999999999999999999987 88899999999
Q ss_pred ccCCCCCCCCCCCc-cccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccc-cccccchhhccccc
Q 002346 144 LSDNPNLAPWPFPN-ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASF-AKSDIQNLWMNDQQ 221 (933)
Q Consensus 144 Ls~N~~~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~~~l~~l~l~~n~ 221 (933)
||+|+|.. +|. -+.+|+.|-.|+||+|++... |..+..|..|++|+|++|.+.-.--..+ +..+|+.|.+++.+
T Consensus 133 LS~N~Iet---IPn~lfinLtDLLfLDLS~NrLe~L-PPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~Tq 208 (1255)
T KOG0444|consen 133 LSYNNIET---IPNSLFINLTDLLFLDLSNNRLEML-PPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQ 208 (1255)
T ss_pred cccCcccc---CCchHHHhhHhHhhhccccchhhhc-CHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhccccc
Confidence 99999998 565 568999999999999999776 6678889999999999998863111111 12568899999999
Q ss_pred CCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCC
Q 002346 222 LGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF 301 (933)
Q Consensus 222 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 301 (933)
.++...+..+.++.+|..+|||.|.|...+..+..+.+|+.|+||+|+|+ .+........+|+.|+||+|+++..+...
T Consensus 209 RTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~av 287 (1255)
T KOG0444|consen 209 RTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAV 287 (1255)
T ss_pred chhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHH
Confidence 99999999999999999999999999988778999999999999999999 77777788899999999999999544332
Q ss_pred --CCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccc
Q 002346 302 --PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLL 379 (933)
Q Consensus 302 --~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l 379 (933)
+++|+.|.+.+|++.. .+||+-++.+.+|+.+..++|.+
T Consensus 288 cKL~kL~kLy~n~NkL~F---------------------------------------eGiPSGIGKL~~Levf~aanN~L 328 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTF---------------------------------------EGIPSGIGKLIQLEVFHAANNKL 328 (1255)
T ss_pred hhhHHHHHHHhccCcccc---------------------------------------cCCccchhhhhhhHHHHhhcccc
Confidence 4567788888887743 46899999999999999999998
Q ss_pred cCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCC
Q 002346 380 AGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432 (933)
Q Consensus 380 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p 432 (933)
. ..|..+..+..|+.|.|++|+|. ++|+++.-|+.|++|||..|+=---+|
T Consensus 329 E-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 329 E-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred c-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 7 78999999999999999999999 999999999999999999996443344
No 399
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=6.3e-32 Score=275.94 Aligned_cols=371 Identities=22% Similarity=0.357 Sum_probs=280.6
Q ss_pred CEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccC
Q 002346 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (933)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 146 (933)
.++.|++.+|++. ++|++++.+..++.|+.++|.+...++.++.+.+|+.|+++.|.+..++++ ++.+-.|+.|+..+
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~-i~~~~~l~dl~~~~ 146 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDS-IGRLLDLEDLDATN 146 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCch-HHHHhhhhhhhccc
Confidence 5788999999998 889999999999999999999998888999999999999999999999887 78889999999999
Q ss_pred CCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccccCCcc
Q 002346 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLS 225 (933)
Q Consensus 147 N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~~~~ 225 (933)
|++.. +|..+.++.+|..|++.+|++....|+.+. ++.|++||...|-++ ++|+.++. .+|..|++..|.+..-
T Consensus 147 N~i~s---lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~l 221 (565)
T KOG0472|consen 147 NQISS---LPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFL 221 (565)
T ss_pred ccccc---CchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccC
Confidence 99988 899999999999999999999888777666 999999999999997 88888876 5788888988887643
Q ss_pred cccccccCCccCcEEEecCCccCCCCCC-CCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCC-
Q 002346 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPS- 303 (933)
Q Consensus 226 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~- 303 (933)
+.|.++..|++|+++.|+++-.+.+ ..++.+|.+|||.+|+++ ..|+.++-+.+|+.||+|+|.+++.++....
T Consensus 222 ---Pef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl 297 (565)
T KOG0472|consen 222 ---PEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL 297 (565)
T ss_pred ---CCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc
Confidence 4677888888888888888866655 558888888888888888 8888888888888888888888876554322
Q ss_pred CccEEeccCCcCCCCCCCC--------------------------------CCCCCch-------hhhhHhhh-------
Q 002346 304 KVQKVSLDHNNFCKNSSDA--------------------------------GKPCDPQ-------VTTLLQIA------- 337 (933)
Q Consensus 304 ~l~~L~l~~n~~~~~~~~~--------------------------------~~~~~~~-------~~~~~~~~------- 337 (933)
.++.|.+.+|.+..+.-++ ..+.... .+..++..
T Consensus 298 hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~V 377 (565)
T KOG0472|consen 298 HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLV 377 (565)
T ss_pred eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccC
Confidence 5666777777763211100 0000000 00000000
Q ss_pred ---------------------------cccCCCc-cccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcC
Q 002346 338 ---------------------------GDMGYPA-ILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYAN 389 (933)
Q Consensus 338 ---------------------------~~~~~~~-~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 389 (933)
..+...+ ........+|..+-+|..++.+++|..|+|++|-+. .+|.+++.
T Consensus 378 PdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~ 456 (565)
T KOG0472|consen 378 PDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS 456 (565)
T ss_pred CHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhh
Confidence 0000000 001122235666666777777888888888877776 57777888
Q ss_pred cccCCeEecccCccc----------------------CCCCc-ccCCCCCcCEEeccCCcCcccCCCCCCCccccc--CC
Q 002346 390 LTSLKNLYLQQNNLT----------------------GPIPD-GLTKLASLQNLDVSNNNLSGKVPDFGSNVKFTV--SP 444 (933)
Q Consensus 390 l~~L~~L~L~~N~l~----------------------g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~--~~ 444 (933)
+-.|+.|||+.|+|. |.++. .+.+|.+|..|||.+|.|...+|.+++...+.. +.
T Consensus 457 lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~ 536 (565)
T KOG0472|consen 457 LVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELD 536 (565)
T ss_pred hhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEec
Confidence 877888888777653 24444 488999999999999999999999987666654 47
Q ss_pred CCCCc
Q 002346 445 GNPFI 449 (933)
Q Consensus 445 ~n~~~ 449 (933)
||||.
T Consensus 537 gNpfr 541 (565)
T KOG0472|consen 537 GNPFR 541 (565)
T ss_pred CCccC
Confidence 99985
No 400
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-28 Score=256.33 Aligned_cols=132 Identities=27% Similarity=0.398 Sum_probs=113.9
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-----C---CcceeEEeEeee-
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-----H---RHLVALLGYCIN- 650 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~- 650 (933)
.+|-+.++||.|.|++||.+ +..+.+.||+|+.+.. ....+....|++++++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 78999999999999999999 6677889999998754 334466789999999994 2 479999999874
Q ss_pred ---CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec
Q 002346 651 ---GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721 (933)
Q Consensus 651 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~ 721 (933)
+.+.++|+|++ |.+|..+|.... .+-++...+.+|++||+.||.|||.. .+|||-||||+|||+.
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeee
Confidence 56899999999 889999997644 35588999999999999999999984 7999999999999984
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1e-28 Score=234.31 Aligned_cols=258 Identities=21% Similarity=0.353 Sum_probs=194.5
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCc--eeE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGS--ERL 655 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~ 655 (933)
.++|++.+++|+|-|+.||.| ...+.++++||++++- ..+.+.+|+.+++.|+ ||||+++++...+.. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 368899999999999999999 5568899999999754 3468999999999996 999999999987754 456
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-CcEEEeccccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVADFGLV 734 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfGla 734 (933)
+|+||+.+.+..... +.++...+..++.+++.||.|||+ .||.|||+||.|+++|.. ...+|+|+|+|
T Consensus 112 LiFE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred hHhhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchH
Confidence 999999988877665 558888899999999999999999 899999999999999854 56999999999
Q ss_pred ccCCCCCceeecccccccCcccccccC-CCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC--
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAA-TGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE-- 811 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 811 (933)
..+.++... .-.+.+..|.-||.+- -..|+..-|+|||||++..|+..+.||....... ..++.. .+++-..+
T Consensus 181 EFYHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkI-akVLGt~el~ 256 (338)
T KOG0668|consen 181 EFYHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKI-AKVLGTDELY 256 (338)
T ss_pred hhcCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHH-HHHhChHHHH
Confidence 988765432 2235567788999874 4568889999999999999999999997654321 112211 11110000
Q ss_pred ----CCCcccCCCCC--------------CChhhHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 ----NIPKAIDPNLN--------------LDEETIE-SIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ----~~~~~~d~~l~--------------~~~~~~~-~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...-.+||.+. ...+... ...+..+++.+.+..|-++|||+.|++.
T Consensus 257 ~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 257 AYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00001122111 0001111 1246779999999999999999999875
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-29 Score=272.20 Aligned_cols=252 Identities=27% Similarity=0.391 Sum_probs=205.4
Q ss_pred hcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
.++|.....+|.|+||.|||++ ...++..|||+++... .....-.++|+-+++..+|||||.++|.+...+..|++|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 4678889999999999999994 4578999999998774 344567889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|||.+|+|.+.-+. .+++++.++..+.++..+|++|||+ .+-+|||||-.||++++.|.+|++|||.+..+.
T Consensus 92 EycgggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred EecCCCcccceeee-----cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhh
Confidence 99999999887654 4789999999999999999999999 888999999999999999999999999987665
Q ss_pred CCCceeecccccccCccccccc---CCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCc
Q 002346 739 DGKYSVETRLAGTFGYLAPEYA---ATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPK 815 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (933)
..- .....+.||+.|||||+. ..+.|..++|||++|++..|+-.-++|..+..++....+.. .....-+.
T Consensus 164 ati-~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT------kS~~qpp~ 236 (829)
T KOG0576|consen 164 ATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT------KSGFQPPT 236 (829)
T ss_pred hhh-hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh------ccCCCCCc
Confidence 422 233457899999999976 45678999999999999999998888887766654433221 11111122
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002346 816 AIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAV 856 (933)
Q Consensus 816 ~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl 856 (933)
.-|+ ......+-++++.|+.++|++||+++.++
T Consensus 237 lkDk--------~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 237 LKDK--------TKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ccCC--------ccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 2221 22234566999999999999999988654
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-28 Score=261.94 Aligned_cols=199 Identities=21% Similarity=0.339 Sum_probs=171.1
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCch------hHHHHHHHHHHHHhcC---CCcceeEEeEee
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNK------GLSEFQAEIAVLTKVR---HRHLVALLGYCI 649 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 649 (933)
..+|...+.+|.|+||.|+.+.. ++...|+||.+.++..-.+ ..-..-.|+++|+.++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 35689999999999999999954 4567899998877653211 1223567999999997 999999999999
Q ss_pred eCceeEEEEeec-CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEE
Q 002346 650 NGSERLLVYEYM-PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (933)
Q Consensus 650 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl 728 (933)
+++.+|++||.. ++.+|.+++.. .+.+++.++..|++||+.|+++||+ ++|||||||-+||.++.+|-+||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEE
Confidence 999999999976 45789999855 3568999999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCceeecccccccCcccccccCCCCC-CCccchHhHHHHHHHHHcCCCCCC
Q 002346 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRV-TTKIDVYAFGVVLMETITGRKALD 789 (933)
Q Consensus 729 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~~l~elltG~~p~~ 789 (933)
+|||.|.....+.. ..++||..|+|||++.+.+| ...-|||++|+++|.++....||.
T Consensus 712 idfgsaa~~ksgpf---d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPF---DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCc---ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999887766543 34689999999999998887 566899999999999999888885
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=7.5e-28 Score=240.51 Aligned_cols=263 Identities=22% Similarity=0.307 Sum_probs=196.0
Q ss_pred cCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeC------ce
Q 002346 581 DNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------SE 653 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 653 (933)
.+|.-++.+|.|.- .|..+ +.-.+++||+|++..........++..+|..++..++|+||++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 56777888999988 55555 445789999999877765566778899999999999999999999998643 46
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGl 733 (933)
.|+|||+| ..+|.+.++. .++-+++..|..|++.|++|||+ .+|+|||+||+||++..+..+||.|||+
T Consensus 96 ~y~v~e~m-~~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM-------ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchh
Confidence 69999999 5699988853 36678899999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchh----------------h
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDR----------------A 797 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~----------------~ 797 (933)
|+..... ...+.++.|..|.|||++.+..+.+.+||||+||++.||++|+.-|.+..--+. .
T Consensus 165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHH
Confidence 9865543 345667889999999999888899999999999999999999988864321110 0
Q ss_pred HHHHHHHHHhhc-----cCCCCcccCC-CCCCCh-hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 798 HLVTWFRRVLIS-----KENIPKAIDP-NLNLDE-ETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 798 ~~~~~~~~~~~~-----~~~~~~~~d~-~l~~~~-~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+....+..... .....+.+.. .+.... .+.-......+++.+||-.+|++|-+++++++
T Consensus 243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000100000000 0111111111 111000 01111223458999999999999999999986
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.6e-26 Score=235.92 Aligned_cols=211 Identities=35% Similarity=0.554 Sum_probs=182.4
Q ss_pred cccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCChh
Q 002346 589 LGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667 (933)
Q Consensus 589 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 667 (933)
||+|++|.||++...+ ++.+++|++....... ..+.+.+|++.++.++|++|+++++++......+++|||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999997744 8999999988663221 3568999999999999999999999999989999999999999999
Q ss_pred hHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEEEecccccccCCCCCceeec
Q 002346 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGLVKNAPDGKYSVET 746 (933)
Q Consensus 668 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~ 746 (933)
+++.... ..+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~ 151 (215)
T cd00180 80 DLLKENE----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLK 151 (215)
T ss_pred HHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhh
Confidence 9986521 358899999999999999999999 89999999999999999 89999999999886654321 122
Q ss_pred ccccccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCCh
Q 002346 747 RLAGTFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDE 825 (933)
Q Consensus 747 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 825 (933)
...+...|++||..... .++.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34678899999999877 888999999999999999
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 826 ETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 826 ~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 246689999999999999999999863
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.4e-27 Score=251.37 Aligned_cols=276 Identities=20% Similarity=0.284 Sum_probs=211.5
Q ss_pred eecHHHHHHHhcCCccCCccccCCCeEEEEEE-eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC------CCcce
Q 002346 570 AISIEVLRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR------HRHLV 642 (933)
Q Consensus 570 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv 642 (933)
.+.+..-+.+..+|.+....|+|-|++|.+|. ...|..||||++.... .-.+.=..|+++|++|+ --|++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 44555567778999999999999999999994 4468899999998652 23455678999999995 34899
Q ss_pred eEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC
Q 002346 643 ALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (933)
Q Consensus 643 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~ 722 (933)
+++-.|....++|||+|-+ .-+|.+.|+.+-. ...+....+..++.|+.-||.+|.. .+|+|.||||+|||+++
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEecc
Confidence 9999999999999999987 5799999987533 2458888999999999999999998 89999999999999987
Q ss_pred CC-cEEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 002346 723 DM-RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 723 ~~-~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~ 801 (933)
.. .+||||||.|........ +.+.-+..|.|||++.+-.|+...|+||.||+||||+||+.-|.+.....+..+.-
T Consensus 572 ~k~iLKLCDfGSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred CcceeeeccCccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 54 689999999987765432 33445667999999999999999999999999999999999998765443322211
Q ss_pred HHHH----HhhccCCC-Cccc--------------------------CC------CC----CCChhhHHHHHHHHHHHHH
Q 002346 802 WFRR----VLISKENI-PKAI--------------------------DP------NL----NLDEETIESIYRVAELAGH 840 (933)
Q Consensus 802 ~~~~----~~~~~~~~-~~~~--------------------------d~------~l----~~~~~~~~~~~~~~~li~~ 840 (933)
-... .+..++.+ ...| .| .+ ....+....+..+.+|+..
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 0000 00000000 0011 11 00 1233445667788999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 002346 841 CTAREPQQRPDMGHAVN 857 (933)
Q Consensus 841 cl~~~P~~RPs~~evl~ 857 (933)
|+..||++|.+..++++
T Consensus 729 ml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALK 745 (752)
T ss_pred HhccChhhcCCHHHHhc
Confidence 99999999999999875
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.4e-27 Score=226.98 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=189.2
Q ss_pred HhcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeE-eeeCceeE
Q 002346 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGY-CINGSERL 655 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~ 655 (933)
..+.|.+.+.+|+|.||.+-.+.. .+.+.+++|.++.. ....++|.+|..---.| .|.||+.-|+. |+..+.+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p---~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP---QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc---hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 457789999999999999999954 46789999998875 33457999998775556 59999988865 45667778
Q ss_pred EEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec-C-CCcEEEecccc
Q 002346 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-D-DMRAKVADFGL 733 (933)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~-~-~~~~kl~DfGl 733 (933)
+++||++.|+|.+-+.. ..+.+....+++.|++.|+.|||+ +.+||||||.+|||+- . ..++|++|||+
T Consensus 99 F~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeeccc
Confidence 99999999999988844 336788889999999999999999 9999999999999993 3 34799999999
Q ss_pred cccCCCCCceeecccccccCcccccccCCC-----CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhh
Q 002346 734 VKNAPDGKYSVETRLAGTFGYLAPEYAATG-----RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLI 808 (933)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 808 (933)
.+..+..- ....-+..|.|||..... ...+.+|||.||+++|.++||..||+...- ....++.|......
T Consensus 170 t~k~g~tV----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~-~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 170 TRKVGTTV----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI-MDKPYWEWEQWLKR 244 (378)
T ss_pred ccccCcee----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc-cCchHHHHHHHhcc
Confidence 87554321 112235578999977433 245679999999999999999999985433 23344555443322
Q ss_pred ccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002346 809 SKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVL 859 (933)
Q Consensus 809 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L 859 (933)
....+|+.+.+- ..+.+++.++-+..+|++|=...++.++.
T Consensus 245 k~~~~P~~F~~f----------s~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 245 KNPALPKKFNPF----------SEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred cCccCchhhccc----------CHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 222333333221 13566788889999999996666665554
No 408
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=1.1e-29 Score=259.71 Aligned_cols=349 Identities=23% Similarity=0.271 Sum_probs=282.5
Q ss_pred CEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccC
Q 002346 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (933)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 146 (933)
.+..++.++|++. .+|++++.+.+|+.|++++|.+...+++++.+..|..|+..+|+++++|++ +.++.+|..|++.+
T Consensus 92 ~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~-~~~~~~l~~l~~~~ 169 (565)
T KOG0472|consen 92 ALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPED-MVNLSKLSKLDLEG 169 (565)
T ss_pred HHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccCchH-HHHHHHHHHhhccc
Confidence 4567889999998 899999999999999999999999999999999999999999999999987 77899999999999
Q ss_pred CCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCccc
Q 002346 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSG 226 (933)
Q Consensus 147 N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~ 226 (933)
|+++. +|+..-+++.|++|++..|-+ +.+|..++.+.+|+.|+|.+|++. .+|+-=+.+.|.+|++..|++....
T Consensus 170 n~l~~---l~~~~i~m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lp 244 (565)
T KOG0472|consen 170 NKLKA---LPENHIAMKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLP 244 (565)
T ss_pred cchhh---CCHHHHHHHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhH
Confidence 99998 777777799999999999887 556888999999999999999998 8885445578999999999886432
Q ss_pred ccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccC---------
Q 002346 227 TLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGP--------- 297 (933)
Q Consensus 227 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--------- 297 (933)
...+..+++|..|||..|+++..+.++.-+.+|..||+|+|.|+ .+|.+++++ .|+.|-+.+|++...
T Consensus 245 -ae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT 321 (565)
T KOG0472|consen 245 -AEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGT 321 (565)
T ss_pred -HHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccH
Confidence 23456789999999999999998888999999999999999999 788899999 999999999998521
Q ss_pred -----------------------------CCCCCC------C--------------------------ccEEeccCCcCC
Q 002346 298 -----------------------------YPLFPS------K--------------------------VQKVSLDHNNFC 316 (933)
Q Consensus 298 -----------------------------~p~~~~------~--------------------------l~~L~l~~n~~~ 316 (933)
++...+ + +..++++.|.++
T Consensus 322 ~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~ 401 (565)
T KOG0472|consen 322 QEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC 401 (565)
T ss_pred HHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh
Confidence 000000 1 234667777776
Q ss_pred CCCCCCCCCCCchhhhhH--------hhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCcccc--------
Q 002346 317 KNSSDAGKPCDPQVTTLL--------QIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLA-------- 380 (933)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~-------- 380 (933)
..+.+.... ....+.+ .++..+.....+..+-..||++..+|.+.+.+..|+.||+|+|++.
T Consensus 402 elPk~L~~l--kelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~ 479 (565)
T KOG0472|consen 402 ELPKRLVEL--KELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRLQTLNLSFNRFRMLPECLYE 479 (565)
T ss_pred hhhhhhHHH--HHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcchhhhhhhhhheecccccccccchHHHhh
Confidence 554321110 0011111 1122223333444555678999999999999999999999877554
Q ss_pred ---------------CcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCc
Q 002346 381 ---------------GNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (933)
Q Consensus 381 ---------------g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 428 (933)
..-|..+.+|.+|..|||.+|.|. .||+.+++|.+|++|++++|+|.
T Consensus 480 lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 480 LQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 223344889999999999999999 99999999999999999999999
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=8.5e-26 Score=235.00 Aligned_cols=200 Identities=33% Similarity=0.471 Sum_probs=172.2
Q ss_pred CccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 583 FSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ...+.+.+|++.++.++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 5667899999999999997754 899999999865322 24678999999999999999999999999889999999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~ 741 (933)
++++|.+++.... ..+++..+..++.++++++.+||+ .+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 80 EGGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 9999999996521 117899999999999999999998 899999999999999999999999999988665542
Q ss_pred ceeecccccccCccccccc-CCCCCCCccchHhHHHHHHHHHcCCCCCCC
Q 002346 742 YSVETRLAGTFGYLAPEYA-ATGRVTTKIDVYAFGVVLMETITGRKALDD 790 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~~l~elltG~~p~~~ 790 (933)
........++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1122334678899999998 667788899999999999999999999965
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2.1e-26 Score=239.40 Aligned_cols=269 Identities=23% Similarity=0.357 Sum_probs=198.8
Q ss_pred HHHHHHhcCCccCCccccCCCeEEEEEEeC----CCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEe
Q 002346 574 EVLRQVTDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYC 648 (933)
Q Consensus 574 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 648 (933)
+.+..+.+.|..+++||+|.|++||++... ..+.||+|.+..... ..+..+|+++|..+ .+.||+++.+++
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhh
Confidence 345566788999999999999999999442 467899999876532 35789999999999 599999999999
Q ss_pred eeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-CCcEE
Q 002346 649 INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAK 727 (933)
Q Consensus 649 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~-~~~~k 727 (933)
...++..+|+||++..+-.++... ++..++..+++.+..||+|+|. .|||||||||+|+|.+. .+.-.
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCce
Confidence 999999999999999999988844 7788999999999999999998 99999999999999985 46789
Q ss_pred EecccccccCCC-------------------C---------------Cce---------eecccccccCcccccccCC-C
Q 002346 728 VADFGLVKNAPD-------------------G---------------KYS---------VETRLAGTFGYLAPEYAAT-G 763 (933)
Q Consensus 728 l~DfGla~~~~~-------------------~---------------~~~---------~~~~~~gt~~y~aPE~~~~-~ 763 (933)
|.|||+|..... + .+. .....+||+||.|||++.. +
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 999999872100 0 000 0112469999999998854 5
Q ss_pred CCCCccchHhHHHHHHHHHcCCCCCCCCCCchh--hHHHHHH-----HHHhhccCC--CCc---------------ccC-
Q 002346 764 RVTTKIDVYAFGVVLMETITGRKALDDTMPDDR--AHLVTWF-----RRVLISKEN--IPK---------------AID- 818 (933)
Q Consensus 764 ~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~--~~~~~~~-----~~~~~~~~~--~~~---------------~~d- 818 (933)
..+.++||||.||+++-+++++.||.....+.. ..++..+ ++.....+. +.+ .++
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 678899999999999999999999986543211 1222111 111111111 000 000
Q ss_pred CCCCC------Chhh--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 819 PNLNL------DEET--IESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 819 ~~l~~------~~~~--~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
..+.. .... ......+.+++.+|++.+|.+|-+++++++
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00000 0001 111235679999999999999999999986
No 411
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=9.1e-25 Score=255.18 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=203.6
Q ss_pred EEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCC
Q 002346 68 VTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (933)
Q Consensus 68 v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 147 (933)
-..|+|++++|+ .+|+.+. ++|+.|++++|+|+.++ .+ +++|++|+|++|+|+.+|.. .++|+.|+|++|
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP-~l--p~~Lk~LdLs~N~LtsLP~l----p~sL~~L~Ls~N 272 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLP-AL--PPELRTLEVSGNQLTSLPVL----PPGLLELSIFSN 272 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCC-CC--CCCCcEEEecCCccCcccCc----ccccceeeccCC
Confidence 467899999998 7888776 48999999999999754 32 58899999999999998752 578999999999
Q ss_pred CCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccc
Q 002346 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227 (933)
Q Consensus 148 ~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~ 227 (933)
.+.. +|.. .++|+.|+|++|+++.. |. .+++|+.|+|++|+|+ .+|..
T Consensus 273 ~L~~---Lp~l---p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~-~Lp~l--------------------- 320 (788)
T PRK15387 273 PLTH---LPAL---PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLA-SLPAL--------------------- 320 (788)
T ss_pred chhh---hhhc---hhhcCEEECcCCccccc-cc---cccccceeECCCCccc-cCCCC---------------------
Confidence 9887 5543 25788999999999765 44 2478999999999998 46642
Q ss_pred cccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccE
Q 002346 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQK 307 (933)
Q Consensus 228 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 307 (933)
..+|+.|++++|+|++.+ .+ ..+|+.|+|++|+|+ .+|.. .++|+.|++++|+|++ +|..++.|+.
T Consensus 321 ------p~~L~~L~Ls~N~L~~LP-~l--p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l~~~L~~ 386 (788)
T PRK15387 321 ------PSELCKLWAYNNQLTSLP-TL--PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPALPSGLKE 386 (788)
T ss_pred ------cccccccccccCcccccc-cc--ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Ccccccccce
Confidence 235677788888887643 32 247888888888888 45543 2467778888888885 5666778888
Q ss_pred EeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhh
Q 002346 308 VSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAY 387 (933)
Q Consensus 308 L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 387 (933)
|+|++|.|.+.+ .. .++|+.|+|++|+|++ +|..+
T Consensus 387 LdLs~N~Lt~LP-----------------------------------------~l---~s~L~~LdLS~N~Lss-IP~l~ 421 (788)
T PRK15387 387 LIVSGNRLTSLP-----------------------------------------VL---PSELKELMVSGNRLTS-LPMLP 421 (788)
T ss_pred EEecCCcccCCC-----------------------------------------Cc---ccCCCEEEccCCcCCC-CCcch
Confidence 888888875432 11 1468889999999985 67543
Q ss_pred cCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCC
Q 002346 388 ANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (933)
Q Consensus 388 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 433 (933)
.+|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|+|.+|.
T Consensus 422 ---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 422 ---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred ---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 46788999999998 8999999999999999999999998875
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.8e-25 Score=213.79 Aligned_cols=247 Identities=23% Similarity=0.409 Sum_probs=197.0
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCC
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
...+|.+...|..|+|++ .|..+++|++.....+....++|..|.-.++-..||||..++|.|.......++..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 345788999999999999 5778889998887777777789999999999999999999999999999999999999999
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeE-ecCCCCCcEEecCCCcEEEe--cccccccCCCCC
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFI-HRDLKPSNILIGDDMRAKVA--DFGLVKNAPDGK 741 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv-H~Dik~~Nill~~~~~~kl~--DfGla~~~~~~~ 741 (933)
+|+..++.. ....++-.++.+++.++|+|++|||+. .+++ ---+..+.|++|++.+++|+ |--++...
T Consensus 273 slynvlhe~---t~vvvd~sqav~faldiargmaflhsl--ep~ipr~~lns~hvmidedltarismad~kfsfqe---- 343 (448)
T KOG0195|consen 273 SLYNVLHEQ---TSVVVDHSQAVRFALDIARGMAFLHSL--EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE---- 343 (448)
T ss_pred HHHHHHhcC---ccEEEecchHHHHHHHHHhhHHHHhhc--chhhhhhhcccceEEecchhhhheecccceeeeec----
Confidence 999999763 335678889999999999999999996 4555 34688999999999988875 22221111
Q ss_pred ceeecccccccCcccccccCCCCC---CCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccC
Q 002346 742 YSVETRLAGTFGYLAPEYAATGRV---TTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAID 818 (933)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 818 (933)
....=.|.||+||.+...+. -+++|+|||++++|||.|+..||.+-.+++....+. -+.++-.+.
T Consensus 344 ----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia--------leglrv~ip 411 (448)
T KOG0195|consen 344 ----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA--------LEGLRVHIP 411 (448)
T ss_pred ----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh--------hccccccCC
Confidence 11233688999999876543 357999999999999999999999887765432221 223333344
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 819 PNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 819 ~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
|.+. ..+.+++.-|+..||.+||.+..++-+||++
T Consensus 412 pgis---------~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGIS---------RHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCcc---------HHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 4333 3467899999999999999999999999875
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=7.4e-26 Score=231.72 Aligned_cols=366 Identities=22% Similarity=0.252 Sum_probs=267.9
Q ss_pred CCCCccc---cceEeCCC----------CCEEEEEecCCCCccccCccccCCcccceeecccccccccCC-CccCcCcCc
Q 002346 51 STGYCEW---TGINCDNS----------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQ 116 (933)
Q Consensus 51 ~~~~C~w---~gv~c~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~ 116 (933)
..+.|+- .-|+|+.. ...+.|+|..|+|+.+.+.+|+.+++|+.|||++|+|+.+-| +|.++.+|.
T Consensus 39 ~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~ 118 (498)
T KOG4237|consen 39 APCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLL 118 (498)
T ss_pred CCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhh
Confidence 3444554 33777642 478999999999998888999999999999999999999999 899999998
Q ss_pred eecccc-ccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEcc
Q 002346 117 DIYLDN-NNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (933)
Q Consensus 117 ~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 195 (933)
.|-+.+ |+|+.++.+.|++|..|+.|.+.-|++.- .....|..+++|..|.+..|.+..+--..|..+..++.+.+.
T Consensus 119 ~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~C--ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 119 SLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINC--IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLA 196 (498)
T ss_pred HHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcc--hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhh
Confidence 888776 99999999999999999999999999988 567899999999999999999977766689999999999999
Q ss_pred CCcCCC------------CCCcccc-----------c------------cccchh---hcccccCCcccccccccCCccC
Q 002346 196 YNNFTG------------SLPASFA-----------K------------SDIQNL---WMNDQQLGLSGTLDVLSGMTQL 237 (933)
Q Consensus 196 ~N~l~~------------~~p~~~~-----------~------------~~l~~l---~l~~n~~~~~~~~~~l~~l~~L 237 (933)
.|.+-. ..|..++ . ..++.+ ....+.........-|.++++|
T Consensus 197 ~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 197 QNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 998321 1121111 1 011111 2222334444445568899999
Q ss_pred cEEEecCCccCCCCC-CCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCC---CccEEeccCC
Q 002346 238 RQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPS---KVQKVSLDHN 313 (933)
Q Consensus 238 ~~L~L~~N~l~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~l~~n 313 (933)
+.|+|++|+++++-+ .|.++.+++.|.|..|+|.......|.++..|+.|+|.+|+++...|..+. .|..|.|-.|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 999999999999776 489999999999999999977788899999999999999999988887654 5667788888
Q ss_pred cCCCC-------------CCCCCCCCCchhhhhHhhhc--------ccCCCccccCCCC----------------CCCCC
Q 002346 314 NFCKN-------------SSDAGKPCDPQVTTLLQIAG--------DMGYPAILSDSWE----------------GNNAC 356 (933)
Q Consensus 314 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~----------------~~~~~ 356 (933)
.|.-+ ......+|... ..+-+++. ..+.++.....-+ .|+.+
T Consensus 357 p~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p-~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~l 435 (498)
T KOG4237|consen 357 PFNCNCRLAWLGEWLRKKSVVGNPRCQSP-GFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLL 435 (498)
T ss_pred cccCccchHHHHHHHhhCCCCCCCCCCCC-chhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccch
Confidence 77321 11111222211 11111110 0001111110000 13334
Q ss_pred CCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCC
Q 002346 357 DGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNN 425 (933)
Q Consensus 357 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N 425 (933)
+.+|.-+- ...++|++.+|.++ .+|.+ .+.+| .+||++|+++..--..|.+|.+|.+|-||+|
T Consensus 436 k~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 436 KLLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 44443332 24667888899888 46666 67788 8999999998666778899999999999887
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-23 Score=207.82 Aligned_cols=264 Identities=19% Similarity=0.275 Sum_probs=205.8
Q ss_pred hcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 657 (933)
.-.|+++++||+|.||+++.| .+-+++.||||.-+... ...++..|.+..+.| ..+.|...|.|..++.+-.||
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 357899999999999999999 56789999999654332 234678888888888 589999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-----CcEEEeccc
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-----MRAKVADFG 732 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-----~~~kl~DfG 732 (933)
+|.+ |.+|.+... -+...++.+++..||.|++.-++|+|+ +.+|.|||||+|+||..- ..+.|+|||
T Consensus 103 idLL-GPSLEDLFD----~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFD----LCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred hhhh-CcCHHHHHH----HhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEecc
Confidence 9998 889988773 234779999999999999999999999 999999999999999643 358999999
Q ss_pred ccccCCCCCc------eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHH
Q 002346 733 LVKNAPDGKY------SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRV 806 (933)
Q Consensus 733 la~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~ 806 (933)
+|+.+.+... .......||.+||+-....+.+.+.+.|+-|+|-++++.+.|..||.+--....... ..++
T Consensus 175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~k---YeKI 251 (449)
T KOG1165|consen 175 MAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEK---YEKI 251 (449)
T ss_pred chhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHH---HHHh
Confidence 9998776543 334457899999999999999999999999999999999999999987543322211 1111
Q ss_pred hhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhc
Q 002346 807 LISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQW 866 (933)
Q Consensus 807 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 866 (933)
-..+. ..+....+...+.++...+.-.-..+-.+-|+++-+...+.++++..
T Consensus 252 Ge~Kr--------~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 252 GETKR--------STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred ccccc--------cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 11010 01112223334556667776677778889999988887777776653
No 415
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=1.8e-24 Score=265.61 Aligned_cols=194 Identities=19% Similarity=0.223 Sum_probs=138.0
Q ss_pred cCC-CcceeEEeEe-------eeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 002346 636 VRH-RHLVALLGYC-------INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS 707 (933)
Q Consensus 636 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 707 (933)
++| +||+++++++ .+.+..+.++||+ +++|.+++... ...+++.+++.++.||++||+|||+ ++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~g 100 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHS---QG 100 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence 445 5788888877 2234567788987 66999999541 2559999999999999999999998 89
Q ss_pred eEecCCCCCcEEecC-------------------CCcEEEecccccccCCCCCc---------------eeecccccccC
Q 002346 708 FIHRDLKPSNILIGD-------------------DMRAKVADFGLVKNAPDGKY---------------SVETRLAGTFG 753 (933)
Q Consensus 708 ivH~Dik~~Nill~~-------------------~~~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~~ 753 (933)
|+||||||+||||+. ++.+|++|||+++....... .......||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 44566667776653211000 00112468899
Q ss_pred cccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHH
Q 002346 754 YLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYR 833 (933)
Q Consensus 754 y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 833 (933)
|+|||++.+..++.++|||||||++|||++|..|+.... ......... ..+ +.. ......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~~~~------~~~----~~~------~~~~~~ 240 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSLRHR------VLP----PQI------LLNWPK 240 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHHHHh------hcC----hhh------hhcCHH
Confidence 999999999999999999999999999999988764311 111111100 011 100 011223
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 002346 834 VAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 834 ~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
...++.+||+++|.+||+|.|+++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhh
Confidence 457888999999999999999976
No 416
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=5e-23 Score=205.35 Aligned_cols=170 Identities=24% Similarity=0.267 Sum_probs=126.0
Q ss_pred CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCce
Q 002346 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (933)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~ 743 (933)
|+|.+++... ...+++.+++.|+.|+++||+|||+ ++ ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc--
Confidence 6899998652 2469999999999999999999998 44 999999999999999 99987654422
Q ss_pred eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCC
Q 002346 744 VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNL 823 (933)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 823 (933)
..|++.|+|||++.+..++.++|||||||++|||+||+.||....... ..+..+..... .. ++.-..
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~-------~~-~~~~~~ 130 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGMP-------AD-DPRDRS 130 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHhc-------cC-Cccccc
Confidence 268999999999999999999999999999999999999997543211 11111111110 00 000000
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 824 DEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 824 ~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
..........+.+++.+|++.+|++||++.|+++.+....
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 1111111125889999999999999999999999876553
No 417
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.6e-22 Score=219.67 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=194.7
Q ss_pred CCccCCccccCCCeEEEEEEeCCC--cEEEEEEeccccCCchhHHHHHHHHHHHHhcCC----CcceeEEeEe-eeCcee
Q 002346 582 NFSEANILGRGGFGVVYGGELPDG--TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH----RHLVALLGYC-INGSER 654 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~ 654 (933)
+|.+.+.||+|+||.||.+..... ..+|+|.......... ..+..|+.++..+.. +++..+++.. ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 799999999999999999965443 4788887665422211 267888888888863 6899999998 477788
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-----CcEEEe
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-----MRAKVA 729 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-----~~~kl~ 729 (933)
++||+.+ |.+|.+...... ...++..+...|+.|++.+|+++|+ .|++||||||.|+++... ..+.|.
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred EEEEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEE
Confidence 9999988 889999875532 4679999999999999999999999 999999999999999754 469999
Q ss_pred cccccc--cCCCCCce------e-ecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhh-HH
Q 002346 730 DFGLVK--NAPDGKYS------V-ETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRA-HL 799 (933)
Q Consensus 730 DfGla~--~~~~~~~~------~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~-~~ 799 (933)
|||+++ ........ . .....||.+|+++....+.+.+++.|+||++.++.|+..|..||......... ..
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998 32221110 1 12356999999999999999999999999999999999999999664332221 11
Q ss_pred HHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhc
Q 002346 800 VTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQW 866 (933)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 866 (933)
........ ... . .... ...+.++...+-..+...+|.+..+...++.+...-
T Consensus 250 ~~~~~~~~-----~~~-----~--~~~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 250 EKDPRKLL-----TDR-----F--GDLK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHhhhhc-----ccc-----c--cCCC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 11111100 000 0 0111 123455666666689999999999999988776554
No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=4.6e-23 Score=223.69 Aligned_cols=170 Identities=26% Similarity=0.225 Sum_probs=131.4
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEEeC--CCcEEEEEEeccccC---CchhHHHHHHHHHHHHhcCCCcceeEEeEeee
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGELP--DGTKIAVKRMESNTM---GNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN 650 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 650 (933)
...+.++|.+.+.||+|+||+||+|... +++.||||++..... .....+.|.+|++++++++|+|+++.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3456688999999999999999999653 577889998753311 223456799999999999999998533322
Q ss_pred CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCC-CCCcEEecCCCcEEEe
Q 002346 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL-KPSNILIGDDMRAKVA 729 (933)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di-k~~Nill~~~~~~kl~ 729 (933)
+..++||||+++++|.. +.. . . ...++.++++||+|||+ ++|+|||| ||+|||++.++.+||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~~---~--~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-ARP---H--G------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hCc---c--c------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEE
Confidence 45799999999999963 211 0 1 14678899999999999 89999999 9999999999999999
Q ss_pred cccccccCCCCCcee-------ecccccccCcccccccCCC
Q 002346 730 DFGLVKNAPDGKYSV-------ETRLAGTFGYLAPEYAATG 763 (933)
Q Consensus 730 DfGla~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~ 763 (933)
|||+|+......... -+...+++.|+|||++...
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999998655432111 1345788999999998644
No 419
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-22 Score=195.17 Aligned_cols=262 Identities=21% Similarity=0.283 Sum_probs=202.2
Q ss_pred HhcCCccCCccccCCCeEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEE
Q 002346 579 VTDNFSEANILGRGGFGVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLL 656 (933)
Q Consensus 579 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 656 (933)
+..+|.++++||.|+||.+|.| ...+|+.||+|+-..... ..++..|.++...++ ...|..+..|..++..-.+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 3578999999999999999999 667899999997654432 246788999999996 4688888888888888899
Q ss_pred EEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC---CcEEEecccc
Q 002346 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFGL 733 (933)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~---~~~kl~DfGl 733 (933)
|||.+ |.+|.+...-. ...++..+++-++-|++.-++|+|. +++|||||||+|+|+.-+ ..+.++|||+
T Consensus 89 VMdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred eeecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccc
Confidence 99988 88999887542 3568999999999999999999998 999999999999999643 4589999999
Q ss_pred cccCCCCCc------eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 734 VKNAPDGKY------SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 734 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
|+.+.+... .......||.+|++-....+.+.+...|+-|+|.++.++-.|..||++-.+.....-.+ ++.
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE---kI~ 237 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE---KIS 237 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH---HHH
Confidence 997665432 22345789999999998888888999999999999999999999999765443322222 111
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhh
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLV 863 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~ 863 (933)
..+-..+ ...-+.-.+.++.-.+..|-..--++-|+..-+-+.+.-+.
T Consensus 238 EkK~s~~--------ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 238 EKKMSTP--------IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred HhhcCCC--------HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 1111111 01122223456677788888888889998877777665554
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1.7e-22 Score=236.16 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=201.0
Q ss_pred CCEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEcc
Q 002346 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (933)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 145 (933)
.+++.|++.+|+|+. +|. ..++|++|+|++|+|+.+++ + .++|+.|+|++|.|+.++.. .++|+.|+|+
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP~-l--p~sL~~L~Ls~N~L~~Lp~l----p~~L~~L~Ls 290 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV-L--PPGLLELSIFSNPLTHLPAL----PSGLCKLWIF 290 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcccC-c--ccccceeeccCCchhhhhhc----hhhcCEEECc
Confidence 368999999999984 664 35899999999999997643 2 46899999999999988752 3679999999
Q ss_pred CCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcc
Q 002346 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (933)
Q Consensus 146 ~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~ 225 (933)
+|+++. +|.. +++|+.|+|++|+|++. |.. ..+|+.|++++|+|+ .+|..
T Consensus 291 ~N~Lt~---LP~~---p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~-~LP~l------------------- 340 (788)
T PRK15387 291 GNQLTS---LPVL---PPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLT-SLPTL------------------- 340 (788)
T ss_pred CCcccc---cccc---ccccceeECCCCccccC-CCC---cccccccccccCccc-ccccc-------------------
Confidence 999987 5543 47899999999999875 442 246889999999998 57642
Q ss_pred cccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCc
Q 002346 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKV 305 (933)
Q Consensus 226 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 305 (933)
..+|+.|+|++|+|+++++. ..+|+.|++++|+|+ .+|... ++|+.|+|++|+|++ +|..+++|
T Consensus 341 --------p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt~-LP~l~s~L 404 (788)
T PRK15387 341 --------PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLTS-LPVLPSEL 404 (788)
T ss_pred --------ccccceEecCCCccCCCCCC---Ccccceehhhccccc-cCcccc---cccceEEecCCcccC-CCCcccCC
Confidence 24789999999999975542 357888999999999 577643 578999999999996 66677899
Q ss_pred cEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCch
Q 002346 306 QKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISP 385 (933)
Q Consensus 306 ~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 385 (933)
+.|++++|.|..+ |.. ..+|+.|+|++|+|+ .+|.
T Consensus 405 ~~LdLS~N~LssI-----------------------------------------P~l---~~~L~~L~Ls~NqLt-~LP~ 439 (788)
T PRK15387 405 KELMVSGNRLTSL-----------------------------------------PML---PSGLLSLSVYRNQLT-RLPE 439 (788)
T ss_pred CEEEccCCcCCCC-----------------------------------------Ccc---hhhhhhhhhccCccc-ccCh
Confidence 9999999998653 221 135788999999998 6899
Q ss_pred hhcCcccCCeEecccCcccCCCCcccCCC
Q 002346 386 AYANLTSLKNLYLQQNNLTGPIPDGLTKL 414 (933)
Q Consensus 386 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 414 (933)
.|+++++|+.|+|++|+|+|.+|..+..+
T Consensus 440 sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 440 SLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred HHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 99999999999999999999988877543
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.1e-21 Score=231.45 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=156.2
Q ss_pred ccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeec
Q 002346 91 QLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYM 170 (933)
Q Consensus 91 ~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L 170 (933)
+...|+++++.++.++..+. ++|+.|+|++|+|+.+|...+ ++|++|+|++|+++. +|..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~Lts---LP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTS---IPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCChhhc---cCCCEEECCCCcccc---CChhhh--ccccEEEC
Confidence 44566666666664433332 356666666666666655432 356666666666554 444332 35666666
Q ss_pred cCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccccccccCCccCcEEEecCCccCCC
Q 002346 171 DNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGP 250 (933)
Q Consensus 171 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 250 (933)
++|++.. +|..+. .+|++|+|++|+|+ .+|..+ .++|+.|+|++|+|++.
T Consensus 249 s~N~L~~-LP~~l~--s~L~~L~Ls~N~L~-~LP~~l--------------------------~~sL~~L~Ls~N~Lt~L 298 (754)
T PRK15370 249 SINRITE-LPERLP--SALQSLDLFHNKIS-CLPENL--------------------------PEELRYLSVYDNSIRTL 298 (754)
T ss_pred cCCccCc-CChhHh--CCCCEEECcCCccC-cccccc--------------------------CCCCcEEECCCCccccC
Confidence 6666653 344443 35666666666665 455432 24678888888888765
Q ss_pred CCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCCCCCCCCCCchh
Q 002346 251 IPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQV 330 (933)
Q Consensus 251 ~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~ 330 (933)
++.+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|.+++.+..++.+|+.|+|++|+|..+
T Consensus 299 P~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~L~~L------------ 361 (754)
T PRK15370 299 PAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVL------------ 361 (754)
T ss_pred cccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCccccCChhhcCcccEEECCCCCCCcC------------
Confidence 54443 46778888888887 4555443 5778888888888765444556788888888877432
Q ss_pred hhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcc
Q 002346 331 TTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDG 410 (933)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 410 (933)
|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..
T Consensus 362 -----------------------------P~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~s 406 (754)
T PRK15370 362 -----------------------------PETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPES 406 (754)
T ss_pred -----------------------------Chhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchh
Confidence 22221 46888899998888 4666654 36888889999888 55654
Q ss_pred cC----CCCCcCEEeccCCcCcc
Q 002346 411 LT----KLASLQNLDVSNNNLSG 429 (933)
Q Consensus 411 ~~----~l~~L~~l~ls~N~l~g 429 (933)
+. .++.+..|+|.+|+|+.
T Consensus 407 l~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 407 LPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhcCCCccEEEeeCCCccH
Confidence 43 35778888999988873
No 422
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=2.2e-24 Score=242.83 Aligned_cols=373 Identities=24% Similarity=0.287 Sum_probs=234.7
Q ss_pred CEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccC
Q 002346 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (933)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 146 (933)
++.+|++++|.+. ..|..|..+.+|+.|+++.|.|...+.+..++.+|++|+|.+|.+..+|.+ +..+++|+.||+|+
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~~lP~~-~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQSLPAS-ISELKNLQYLDLSF 123 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccchhhcCchh-HHhhhcccccccch
Confidence 3889999998886 788899999999999999999997776899999999999999999998876 89999999999999
Q ss_pred CCCCCCCCCCccccCCccCCeeeccCc-------------------ccCCCCChhhcCCCCCCEEEccCCcCCCCCCccc
Q 002346 147 NPNLAPWPFPNELTKSTSLTTLYMDNA-------------------NIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASF 207 (933)
Q Consensus 147 N~~~~~~~~p~~~~~l~~L~~L~L~~n-------------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 207 (933)
|++.. +|..+..++.+..+..++| .+.+.++..+..++. .|+|++|.+. ..--..
T Consensus 124 N~f~~---~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~dls~ 197 (1081)
T KOG0618|consen 124 NHFGP---IPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLDLSN 197 (1081)
T ss_pred hccCC---CchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhhhhh
Confidence 99876 6666666665555555555 444444444444444 4666666665 211111
Q ss_pred cccccchhhcccccCCccc-----------------ccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcc
Q 002346 208 AKSDIQNLWMNDQQLGLSG-----------------TLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQL 270 (933)
Q Consensus 208 ~~~~l~~l~l~~n~~~~~~-----------------~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l 270 (933)
...++.+....|++.... ....-.--.+|+++++++|++++.+..+..+.+|+.|++.+|+|
T Consensus 198 -~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 198 -LANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRL 276 (1081)
T ss_pred -ccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhcccceEecccchhH
Confidence 112333333333322100 00000112456666666666666664466666677777777766
Q ss_pred cccCcccccCCCCCCEEEccCccCccCCCCC--CCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhc--------cc
Q 002346 271 TGVVPASVISLPALLNISLQNNKLQGPYPLF--PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAG--------DM 340 (933)
Q Consensus 271 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 340 (933)
+ .+|..+..+++|+.|++.+|.+.-..|.. ...|+.|+|..|+|...+.....-......++-.... +.
T Consensus 277 ~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 277 V-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred H-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 5 66666666666666666666666544432 3578899999999977654322211111111110000 01
Q ss_pred CCCccccC-CCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccC--------------
Q 002346 341 GYPAILSD-SWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTG-------------- 405 (933)
Q Consensus 341 ~~~~~l~~-~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-------------- 405 (933)
.....+.. ++.+|.+....=..+-...+|+.|+|++|+|.......+.++..|+.|+||+|+|+.
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL 435 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTL 435 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHH
Confidence 11112222 223344444433445566778888888887774444567777777777777777651
Q ss_pred --------CCCcccCCCCCcCEEeccCCcCccc-CCCCC--CCcccccCCCCCCcC
Q 002346 406 --------PIPDGLTKLASLQNLDVSNNNLSGK-VPDFG--SNVKFTVSPGNPFIG 450 (933)
Q Consensus 406 --------~~p~~~~~l~~L~~l~ls~N~l~g~-~p~~~--~~~~~~~~~~n~~~~ 450 (933)
.+| ++..++.|+++|||.|+|+.. +|... ..++-..+.||+|..
T Consensus 436 ~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 436 RAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred hhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccc
Confidence 455 677888999999999999754 33322 345555677888743
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=9.6e-22 Score=231.83 Aligned_cols=202 Identities=24% Similarity=0.371 Sum_probs=138.8
Q ss_pred CEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccC
Q 002346 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (933)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 146 (933)
+.+.|++++++++ .+|..+. ++|+.|+|++|+|+.+++.+. .+|++|+|++|+|+.+|... .++|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATL---PDTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhh---hccccEEECcC
Confidence 4788999999998 5777664 589999999999997655554 58999999999999988653 25799999999
Q ss_pred CCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCccc
Q 002346 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSG 226 (933)
Q Consensus 147 N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~ 226 (933)
|++.. +|..+. ++|+.|+|++|+|.. +|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 251 N~L~~---LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp------------------ 303 (754)
T PRK15370 251 NRITE---LPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIR-TLPAHLP------------------ 303 (754)
T ss_pred CccCc---CChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccc-cCcccch------------------
Confidence 99986 677664 589999999999985 576654 58999999999999 5776543
Q ss_pred ccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCcc
Q 002346 227 TLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQ 306 (933)
Q Consensus 227 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 306 (933)
++|+.|++++|+++..++.+. ++|+.|++++|.|+ .+|..+. ++|+.|+|++|+|+..+...+..|+
T Consensus 304 --------~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~~LP~~lp~~L~ 370 (754)
T PRK15370 304 --------SGITHLNVQSNSLTALPETLP--PGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQITVLPETLPPTIT 370 (754)
T ss_pred --------hhHHHHHhcCCccccCCcccc--ccceeccccCCccc-cCChhhc--CcccEEECCCCCCCcCChhhcCCcC
Confidence 234445555555554332221 34555555555555 2444332 4555555555555532222334555
Q ss_pred EEeccCCcCC
Q 002346 307 KVSLDHNNFC 316 (933)
Q Consensus 307 ~L~l~~n~~~ 316 (933)
.|+|++|+|.
T Consensus 371 ~LdLs~N~Lt 380 (754)
T PRK15370 371 TLDVSRNALT 380 (754)
T ss_pred EEECCCCcCC
Confidence 5555555553
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=5.1e-20 Score=204.08 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=199.6
Q ss_pred CccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCch-hHHHHHHHHHHHHhcCCC-cceeEEeEeeeCceeEEEEee
Q 002346 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK-GLSEFQAEIAVLTKVRHR-HLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 660 (933)
|.+.+.||.|+||.||++... ..+++|.+........ ....+.+|+.+++.+.|+ +++++++++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999775 8899999987754443 577899999999999988 799999999777778999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC-cEEEecccccccCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVKNAPD 739 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~~~~~ 739 (933)
+.++++.+++...... ..+.......++.|++.+++|+|+ .+++|||+||+||+++..+ .++++|||.++....
T Consensus 80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999776542111 368899999999999999999999 8999999999999999988 799999999885544
Q ss_pred CCce-----eecccccccCcccccccCC---CCCCCccchHhHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHHHhhcc
Q 002346 740 GKYS-----VETRLAGTFGYLAPEYAAT---GRVTTKIDVYAFGVVLMETITGRKALDDTMPD-DRAHLVTWFRRVLISK 810 (933)
Q Consensus 740 ~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~ 810 (933)
.... ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... ........+... .
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~ 231 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL---P 231 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc---C
Confidence 3322 2355689999999999987 57889999999999999999999997654321 011111111111 1
Q ss_pred CC-CCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 811 EN-IPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 811 ~~-~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
.. .......... ......+.+++..|+..+|..|.++.+....
T Consensus 232 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TPSLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CcccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 1111111100 2223456789999999999999998887764
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.1e-22 Score=231.81 Aligned_cols=261 Identities=20% Similarity=0.261 Sum_probs=191.1
Q ss_pred ccCCccccCCCeEEEEEE-eCCCcEEEEEEecc---ccCCch-hHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 584 SEANILGRGGFGVVYGGE-LPDGTKIAVKRMES---NTMGNK-GLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
...+++|.|++|.|+... ....+.++.|.+.. ...+.. ....+..|+.+-..++|||++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 346789999999887773 33444455554431 111222 2223677888888899999998888777766666669
Q ss_pred eecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
|||++ +|..++.. ...+...++..++.|+.+|++|+|+ .||.|||+|++|++++.+|.+||+|||.+....
T Consensus 401 E~~~~-Dlf~~~~~-----~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMS-----NGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred hcccH-HHHHHHhc-----ccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeec
Confidence 99999 99999855 1357888899999999999999999 899999999999999999999999999886443
Q ss_pred CCC---ceeecccccccCcccccccCCCCCCC-ccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCC
Q 002346 739 DGK---YSVETRLAGTFGYLAPEYAATGRVTT-KIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIP 814 (933)
Q Consensus 739 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (933)
.+. .......+|+..|+|||.+.+.+|.+ ..||||.|++++.|++|+.||......+..... . . ..
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~----~----~--~~ 541 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT----N----N--YS 541 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh----h----c--cc
Confidence 322 24456788999999999999999865 699999999999999999999765443332100 0 0 00
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhhhhcCCC
Q 002346 815 KAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPLVEQWKPA 869 (933)
Q Consensus 815 ~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 869 (933)
..................+...++.++++.+|.+|-++++|++ ++|...
T Consensus 542 ~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~------d~W~~~ 590 (601)
T KOG0590|consen 542 DQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN------DEWIRS 590 (601)
T ss_pred cccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh------ChHhhh
Confidence 0000000111112233456778999999999999999999987 667643
No 426
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.84 E-value=9.4e-20 Score=230.57 Aligned_cols=330 Identities=16% Similarity=0.202 Sum_probs=189.6
Q ss_pred CCEEEEEecCC------CCccccCccccCCc-ccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCC
Q 002346 66 NRVTTISLAKS------GLSGTLSPEISSLT-QLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTN 138 (933)
Q Consensus 66 ~~v~~L~l~~~------~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 138 (933)
.+++.|.+..+ ++...+|..+..++ +|+.|++.+|.+...++.| .+.+|++|+|.+|++..++.+ +..+++
T Consensus 558 ~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~-~~~l~~ 635 (1153)
T PLN03210 558 RNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDG-VHSLTG 635 (1153)
T ss_pred ccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccc-cccCCC
Confidence 35666666544 23345666666654 5888888887776554455 467788888888888777654 567788
Q ss_pred CCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcc
Q 002346 139 LQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMN 218 (933)
Q Consensus 139 L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~ 218 (933)
|+.|+|++|.... .+| .+..+++|+.|+|++|.....+|..++++++|+.|+|++|..-+.+|..+...+|+.|.+.
T Consensus 636 Lk~L~Ls~~~~l~--~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Ls 712 (1153)
T PLN03210 636 LRNIDLRGSKNLK--EIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLS 712 (1153)
T ss_pred CCEEECCCCCCcC--cCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCC
Confidence 8888887765444 244 4777788888888877766777778888888888888876544577776655667777777
Q ss_pred cccCCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCccc-------ccCcccccCCCCCCEEEccC
Q 002346 219 DQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLT-------GVVPASVISLPALLNISLQN 291 (933)
Q Consensus 219 ~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~-------~~~p~~l~~l~~L~~L~Ls~ 291 (933)
+|..... .+ ....+|+.|+|++|.++..+..+ .+++|+.|++.++... ...+..+...++|+.|+|++
T Consensus 713 gc~~L~~--~p--~~~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~ 787 (1153)
T PLN03210 713 GCSRLKS--FP--DISTNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSD 787 (1153)
T ss_pred CCCCccc--cc--cccCCcCeeecCCCccccccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCC
Confidence 7643211 11 11356777777777776543322 3444444444432211 01111111223444555555
Q ss_pred ccCccCCCCC---CCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCc
Q 002346 292 NKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGR 368 (933)
Q Consensus 292 N~l~~~~p~~---~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~ 368 (933)
|...+.+|.. +.+|+.|++++|......+.. ...+..-.+.+.+|..+..+|.. .++
T Consensus 788 n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~-----------------~~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 788 IPSLVELPSSIQNLHKLEHLEIENCINLETLPTG-----------------INLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred CCCccccChhhhCCCCCCEEECCCCCCcCeeCCC-----------------CCccccCEEECCCCCcccccccc---ccc
Confidence 4444444432 223444444443211110000 00000111122222333333332 246
Q ss_pred eeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCc
Q 002346 369 IITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNN 426 (933)
Q Consensus 369 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~ 426 (933)
|+.|+|++|.++ .+|.++..+++|+.|+|++|+-...+|..+..++.|+.++++++.
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 777788888776 477778888888888887744333577777777888888877763
No 427
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.4e-20 Score=188.12 Aligned_cols=142 Identities=18% Similarity=0.206 Sum_probs=110.2
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchh-------H-----------------HHHHHHHHHHHhcCCCcc
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKG-------L-----------------SEFQAEIAVLTKVRHRHL 641 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------~-----------------~~~~~E~~~l~~l~h~ni 641 (933)
...||+|+||.||+|...+|+.||||+++....+... . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998778999999999765322111 1 122459999999988776
Q ss_pred eeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHh-hhccCCCeEecCCCCCcEEe
Q 002346 642 VALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYL-HSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 642 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dik~~Nill 720 (933)
.....+.. ...++||||++++++...... ..++++.++..++.|++.+|+|+ |+ .+|+||||||+||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence 44433322 223899999998877655322 24688999999999999999999 67 899999999999999
Q ss_pred cCCCcEEEecccccccCC
Q 002346 721 GDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~ 738 (933)
+ ++.++|+|||+|....
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999987543
No 428
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=8e-21 Score=191.08 Aligned_cols=175 Identities=14% Similarity=0.155 Sum_probs=136.7
Q ss_pred HHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCch-hHHH------HHHHHHHHHhcCCCcceeEEeEee
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK-GLSE------FQAEIAVLTKVRHRHLVALLGYCI 649 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~------~~~E~~~l~~l~h~niv~l~~~~~ 649 (933)
..+..+|++.+++|.|+||.||.++. ++..+|+|++........ .... +.+|+..+.++.|++|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 45578999999999999999999876 577899999976543222 1222 689999999999999999998865
Q ss_pred eC--------ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec
Q 002346 650 NG--------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721 (933)
Q Consensus 650 ~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~ 721 (933)
.. ...++||||++|.+|.++.. ++. ....+++.++..+|+ .+++|||+||+||+++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~ 169 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVS 169 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEe
Confidence 33 35789999999999987741 222 246699999999998 8999999999999999
Q ss_pred CCCcEEEecccccccCCCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHH
Q 002346 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETI 782 (933)
Q Consensus 722 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ell 782 (933)
+++ ++|+|||.......... ...+.....+..++|+|+||+++..+.
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a-------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKA-------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhh-------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 988 99999998765432211 011344456677999999999987654
No 429
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.83 E-value=1.3e-19 Score=229.21 Aligned_cols=305 Identities=17% Similarity=0.183 Sum_probs=228.6
Q ss_pred CCEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceecccccc-ccCCCCCcccCCCCCCEEEc
Q 002346 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNN-FTSVPTGCFDGLTNLQVLSL 144 (933)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L 144 (933)
..++.|.+.++.+. .+|..| ...+|+.|+|++|.|......+..+++|++|+|++|. +..+|. +..+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEe
Confidence 36888999998886 677776 5789999999999998765678889999999999865 666653 788999999999
Q ss_pred cCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCc
Q 002346 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGL 224 (933)
Q Consensus 145 s~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~ 224 (933)
++|.... .+|..+.++++|+.|++++|...+.+|..+ ++++|++|+|++|...+.+|... .+|++|++.+|.+..
T Consensus 665 ~~c~~L~--~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~--~nL~~L~L~~n~i~~ 739 (1153)
T PLN03210 665 SDCSSLV--ELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDIS--TNISWLDLDETAIEE 739 (1153)
T ss_pred cCCCCcc--ccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCcccccccc--CCcCeeecCCCcccc
Confidence 9987665 588999999999999999887666777766 78999999999987766777543 457888888887643
Q ss_pred ccccccccCCccCcEEEecCCccCCC-------CCC-CCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCcc
Q 002346 225 SGTLDVLSGMTQLRQVWLHKNQFTGP-------IPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQG 296 (933)
Q Consensus 225 ~~~~~~l~~l~~L~~L~L~~N~l~~~-------~~~-~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 296 (933)
. +....+++|+.|++.++..... .+. ....++|+.|+|++|...+.+|.+++++++|+.|+|++|...+
T Consensus 740 l---P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~ 816 (1153)
T PLN03210 740 F---PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE 816 (1153)
T ss_pred c---cccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC
Confidence 2 2222467788888776432211 111 2334678888888888777888888888888888888876555
Q ss_pred CCCCC--CCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEc
Q 002346 297 PYPLF--PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINL 374 (933)
Q Consensus 297 ~~p~~--~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~L 374 (933)
.+|.. +.+|+.|+|++|..-...+. .+..+..+...++.+..+|..+..+++|+.|+|
T Consensus 817 ~LP~~~~L~sL~~L~Ls~c~~L~~~p~--------------------~~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L 876 (1153)
T PLN03210 817 TLPTGINLESLESLDLSGCSRLRTFPD--------------------ISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDM 876 (1153)
T ss_pred eeCCCCCccccCEEECCCCCccccccc--------------------cccccCEeECCCCCCccChHHHhcCCCCCEEEC
Confidence 55543 46788888887654222111 112233333445566789999999999999999
Q ss_pred cCccccCcCchhhcCcccCCeEecccCc
Q 002346 375 ANKLLAGNISPAYANLTSLKNLYLQQNN 402 (933)
Q Consensus 375 s~N~l~g~~p~~~~~l~~L~~L~L~~N~ 402 (933)
++|+-...+|..+..|++|+.|++++|.
T Consensus 877 ~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 877 NGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCcCccCcccccccCCCeeecCCCc
Confidence 9965555688899999999999999885
No 430
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.2e-19 Score=178.14 Aligned_cols=189 Identities=17% Similarity=0.113 Sum_probs=142.0
Q ss_pred ccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC--chhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEEee
Q 002346 584 SEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
.+...|++|+||+||.+.. .+.+++.+.+.....- ......|.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998876 7888888877655331 112235889999999995 5889999886 346899999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCC-CCCcEEecCCCcEEEecccccccCCC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL-KPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di-k~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
++|.+|.+.+.. ....++.|++++++++|+ +||+|||| ||+|||++.++.++|+|||+|.....
T Consensus 80 I~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 80 LAGAAMYQRPPR------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred ecCccHHhhhhh------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 999998654311 113578899999999999 89999999 79999999999999999999985543
Q ss_pred CCce----e--------ecccccccCcccccccCCC-CCC-CccchHhHHHHHHHHHcCCCCCCCCC
Q 002346 740 GKYS----V--------ETRLAGTFGYLAPEYAATG-RVT-TKIDVYAFGVVLMETITGRKALDDTM 792 (933)
Q Consensus 740 ~~~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~SlG~~l~elltG~~p~~~~~ 792 (933)
.... . ......++.|++|+...-- ..+ ...+.++-|+.+|.++||+.+.....
T Consensus 145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 2210 0 1112357778888744221 223 46788899999999999998876543
No 431
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=2e-21 Score=219.14 Aligned_cols=305 Identities=25% Similarity=0.303 Sum_probs=213.6
Q ss_pred EEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCC
Q 002346 68 VTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (933)
Q Consensus 68 v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 147 (933)
++.|+++.|-+-...-+.+..-.+|+.|++++|++...+-.+..+.+|+.|+++.|.|..+|. ...++.+|++|.|.+|
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~-s~~~~~~l~~lnL~~n 101 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPS-SCSNMRNLQYLNLKNN 101 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCch-hhhhhhcchhheeccc
Confidence 666677766654322233344445777777777776544467777777777777777777773 3667777777777777
Q ss_pred CCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccc
Q 002346 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227 (933)
Q Consensus 148 ~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~ 227 (933)
++.. +|..+..+++|+.|+++.|++ +.+|..+..++.++.+..++|.....++.. .++.+++..|.+.....
T Consensus 102 ~l~~---lP~~~~~lknl~~LdlS~N~f-~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~----~ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 102 RLQS---LPASISELKNLQYLDLSFNHF-GPIPLVIEVLTAEEELAASNNEKIQRLGQT----SIKKLDLRLNVLGGSFL 173 (1081)
T ss_pred hhhc---CchhHHhhhcccccccchhcc-CCCchhHHhhhHHHHHhhhcchhhhhhccc----cchhhhhhhhhcccchh
Confidence 7766 677777777777777777776 455777777777777777777322233332 24555555555443332
Q ss_pred cccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCC-CCCcc
Q 002346 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF-PSKVQ 306 (933)
Q Consensus 228 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 306 (933)
.+ +..++. .|+|..|.+. .-++..+.+|+.|....|++... .-..++|+.|+.++|.++...+.+ +.+++
T Consensus 174 ~~-i~~l~~--~ldLr~N~~~--~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~ 244 (1081)
T KOG0618|consen 174 ID-IYNLTH--QLDLRYNEME--VLDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDVHPVPLNLQ 244 (1081)
T ss_pred cc-hhhhhe--eeecccchhh--hhhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeeccccccccce
Confidence 22 222333 4888888887 44677788888888888888732 223467888888888888555543 56788
Q ss_pred EEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchh
Q 002346 307 KVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPA 386 (933)
Q Consensus 307 ~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 386 (933)
.+++++|+|++ +|++++.+.+|+.|+.++|+|+ .+|..
T Consensus 245 ~~dis~n~l~~-----------------------------------------lp~wi~~~~nle~l~~n~N~l~-~lp~r 282 (1081)
T KOG0618|consen 245 YLDISHNNLSN-----------------------------------------LPEWIGACANLEALNANHNRLV-ALPLR 282 (1081)
T ss_pred eeecchhhhhc-----------------------------------------chHHHHhcccceEecccchhHH-hhHHH
Confidence 88888888854 5778888888999999999885 68888
Q ss_pred hcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCC
Q 002346 387 YANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (933)
Q Consensus 387 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 433 (933)
+..+++|++|++..|++. -+|+.+..++.|++|+|..|+|...++.
T Consensus 283 i~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~ 328 (1081)
T KOG0618|consen 283 ISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDN 328 (1081)
T ss_pred HhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchH
Confidence 888888999999989888 7788888888889999998888766653
No 432
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-21 Score=197.67 Aligned_cols=301 Identities=21% Similarity=0.264 Sum_probs=197.4
Q ss_pred ceEeCCCCCEEEEEecCCCCccccCccccCCcccceeecccccccccCC-CccCcCcCceeccccccccCCCCCcccCCC
Q 002346 59 GINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLT 137 (933)
Q Consensus 59 gv~c~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 137 (933)
+.+|.+.. =..++.++.+|+ .+|..+- ...++++|..|+|+.++| +|+.+++|+.||||+|+|+.|.+++|.+++
T Consensus 40 pC~Cs~~~-g~~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~ 115 (498)
T KOG4237|consen 40 PCTCSDVE-GGIVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLA 115 (498)
T ss_pred CcccCCCC-CceEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhH
Confidence 45555433 356788999998 5665443 357889999999999888 899999999999999999999999999999
Q ss_pred CCCEEEccC-CCCCCCCCCC-ccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCc-cccc-cccc
Q 002346 138 NLQVLSLSD-NPNLAPWPFP-NELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA-SFAK-SDIQ 213 (933)
Q Consensus 138 ~L~~L~Ls~-N~~~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~-~~l~ 213 (933)
+|..|-+.+ |+|+. +| ..|.+|..|+.|.+.-|++.-...+.|..+++|..|.|..|.+. +++. +|.. ..++
T Consensus 116 ~l~~Lvlyg~NkI~~---l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~ 191 (498)
T KOG4237|consen 116 SLLSLVLYGNNKITD---LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIK 191 (498)
T ss_pred hhhHHHhhcCCchhh---hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccc
Confidence 988887766 88888 45 58899999999999999999999999999999999999999998 6665 4433 2344
Q ss_pred hhhcccccCC------c-----ccccccccCCccCcEEEecCCccCCCCCC-CCC-CCCCC-EEEccCCcccccCc-ccc
Q 002346 214 NLWMNDQQLG------L-----SGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSK-CESLF-DLSLRDNQLTGVVP-ASV 278 (933)
Q Consensus 214 ~l~l~~n~~~------~-----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~-~~~L~-~L~L~~N~l~~~~p-~~l 278 (933)
.+++..|... . ......+++.....-..|..+++....+. |.. +.++. .+....+... .-| ..|
T Consensus 192 tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~-~cP~~cf 270 (498)
T KOG4237|consen 192 TLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDS-ICPAKCF 270 (498)
T ss_pred hHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCC-cChHHHH
Confidence 4444444311 0 00001222233333333333333332221 111 11111 1111122222 333 345
Q ss_pred cCCCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCC
Q 002346 279 ISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDG 358 (933)
Q Consensus 279 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 358 (933)
..+++|+.|+|++|+++++-+
T Consensus 271 ~~L~~L~~lnlsnN~i~~i~~----------------------------------------------------------- 291 (498)
T KOG4237|consen 271 KKLPNLRKLNLSNNKITRIED----------------------------------------------------------- 291 (498)
T ss_pred hhcccceEeccCCCccchhhh-----------------------------------------------------------
Confidence 566666666666666664322
Q ss_pred CCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcc
Q 002346 359 WPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSG 429 (933)
Q Consensus 359 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g 429 (933)
.++..+.+|++|.|..|+|...--..|.++..|+.|+|++|+|+-.-|.+|..+.+|..|+|-.|++..
T Consensus 292 --~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 292 --GAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred --hhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 122333455666666666655555567777777777777777776677777777777777777777754
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.8e-19 Score=178.11 Aligned_cols=143 Identities=20% Similarity=0.246 Sum_probs=112.5
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchh------------------------HHHHHHHHHHHHhcCCCcc
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKG------------------------LSEFQAEIAVLTKVRHRHL 641 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~ni 641 (933)
...||+|+||.||+|...+|+.||||+++........ ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5689999999999998778999999998865321100 1234678999999999987
Q ss_pred eeEEeEeeeCceeEEEEeecCCCChhhH-hhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 642 VALLGYCINGSERLLVYEYMPRGTLAQH-LFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 642 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
.....+... ..++||||++++++... +.. ..++..+...++.|++.++.++|+ ..+|+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEE
Confidence 554444332 24899999998865443 322 357788999999999999999997 3699999999999999
Q ss_pred cCCCcEEEecccccccCCC
Q 002346 721 GDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~~ 739 (933)
+ ++.++|+|||++.....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999886544
No 434
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-20 Score=206.42 Aligned_cols=227 Identities=24% Similarity=0.348 Sum_probs=181.9
Q ss_pred ccccCCCeEEEEEE----eCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEEEeecC
Q 002346 588 ILGRGGFGVVYGGE----LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
.+|+|.||.|+.++ ...|.-+|.|++++.............|..++...+ ||.+|++...++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999763 234778899988876544443446677888999996 9999999999999999999999999
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~ 742 (933)
+|.|...+.. ...+++.....+...++-|++++|+ .+|+|||+|++||+++.+|++++.|||+++..-+...
T Consensus 81 gg~lft~l~~-----~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 81 GGDLFTRLSK-----EVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cchhhhcccc-----CCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 9999988854 3557778888888899999999999 8999999999999999999999999999986654332
Q ss_pred eeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCC
Q 002346 743 SVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLN 822 (933)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 822 (933)
. +||..|||||++. ....++|.||||++++||+||..||.. +....++..+...+..+
T Consensus 153 ~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il~~~~~~p~~l----- 210 (612)
T KOG0603|consen 153 A-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMKRILKAELEMPREL----- 210 (612)
T ss_pred c-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHHHHhhhccCCchhh-----
Confidence 2 8999999999998 567789999999999999999999975 11222333233333222
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 002346 823 LDEETIESIYRVAELAGHCTAREPQQRPDM 852 (933)
Q Consensus 823 ~~~~~~~~~~~~~~li~~cl~~~P~~RPs~ 852 (933)
.....+++..++..+|..|...
T Consensus 211 --------~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 211 --------SAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred --------hHHHHHHHHHHHhhCHHHHhcc
Confidence 2334578888999999999855
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=1.2e-19 Score=188.15 Aligned_cols=237 Identities=22% Similarity=0.331 Sum_probs=151.9
Q ss_pred CCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccC-CchhHHHHHHHHHHHHhcCC----------CcceeEEeEee
Q 002346 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRH----------RHLVALLGYCI 649 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 649 (933)
.+...+.||.|+|+.||.+.. .+|+++|||++..... +....+++++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 345678899999999999955 5699999998765542 33457788888766655432 22222222211
Q ss_pred ---------eC---c-----eeEEEEeecCCCChhhHhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEe
Q 002346 650 ---------NG---S-----ERLLVYEYMPRGTLAQHLFEWHD--HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIH 710 (933)
Q Consensus 650 ---------~~---~-----~~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 710 (933)
.. . ..+++|+-+ .++|.+++..... .....+....+..+..|+++.+++||+ .|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence 11 1 226778877 5688877532111 112234455667788999999999999 99999
Q ss_pred cCCCCCcEEecCCCcEEEecccccccCCCCCceeecccccccCcccccccCC--------CCCCCccchHhHHHHHHHHH
Q 002346 711 RDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAAT--------GRVTTKIDVYAFGVVLMETI 782 (933)
Q Consensus 711 ~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlG~~l~ell 782 (933)
+||+|+|++++.+|.++|+||+......... .. ...+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEE---EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCcee---ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999999877554321 11 344578999997643 24788999999999999999
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCC
Q 002346 783 TGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQR 849 (933)
Q Consensus 783 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~R 849 (933)
+|+.||+...+...... .+. .+.+..+.+..+|..+++.+|++|
T Consensus 245 C~~lPf~~~~~~~~~~~----------------~f~-------~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW----------------DFS-------RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG----------------GGT-------TSS---HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc----------------cch-------hcCCcCHHHHHHHHHHccCCcccC
Confidence 99999986543221100 111 111445678899999999999988
No 436
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.79 E-value=4.5e-20 Score=211.33 Aligned_cols=250 Identities=19% Similarity=0.226 Sum_probs=176.4
Q ss_pred CCccCCccccCCCeEEEEEEeCCCcEEEEEEecccc--CCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 582 NFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNT--MGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 582 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.|...+.||.+.|=.|.+|+.++|. |+||++-+.. .+-+...+-..|++ ...++|||.+++.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4666788999999999999987887 8999986653 22223333344444 555689999998887766777788888
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc--C
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN--A 737 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~--~ 737 (933)
|.. -+|++.+.. .+-+...+.+-|+.|++.|+..+|. .+|+|||||.+|||++.-.=+.|+||..-+. .
T Consensus 102 yvk-hnLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 102 YVK-HNLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYL 172 (1431)
T ss_pred HHh-hhhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccC
Confidence 884 589988854 2336777888899999999999999 8999999999999999999999999986552 2
Q ss_pred CCCCceeeccc----ccccCcccccccCCC-----------CCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002346 738 PDGKYSVETRL----AGTFGYLAPEYAATG-----------RVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVT 801 (933)
Q Consensus 738 ~~~~~~~~~~~----~gt~~y~aPE~~~~~-----------~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~ 801 (933)
+.+.....+.+ ..-.+|.|||.+... ..+++.||||+||++.||++ |+++|.-. .+..
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~a 246 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLA 246 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHh
Confidence 22221111111 223579999977431 15678999999999999998 57777532 1111
Q ss_pred HHHHH-hhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 002346 802 WFRRV-LISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGP 861 (933)
Q Consensus 802 ~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~ 861 (933)
+.... ...+..+.++-|. .+..++..|++.||++|.++++.++.-++
T Consensus 247 Yr~~~~~~~e~~Le~Ied~-------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDV-------------SLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HhccCccCHHHHHHhCcCc-------------cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 11110 0000001111111 35689999999999999999999987443
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.6e-19 Score=183.74 Aligned_cols=197 Identities=26% Similarity=0.309 Sum_probs=139.4
Q ss_pred CCCcceeEEeEeee---------------------------CceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHH
Q 002346 637 RHRHLVALLGYCIN---------------------------GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTI 689 (933)
Q Consensus 637 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 689 (933)
+|||||++.++|.+ +...|+||...+ .+|.+++.. ...+...+.-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~------~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT------RHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc------CCCchHHHHHH
Confidence 59999999887643 234588998774 599999965 34566778889
Q ss_pred HHHHHHHHHHhhhccCCCeEecCCCCCcEEec--CCC--cEEEecccccccCCCCC-----ceeecccccccCccccccc
Q 002346 690 ALDVARGVEYLHSLAQQSFIHRDLKPSNILIG--DDM--RAKVADFGLVKNAPDGK-----YSVETRLAGTFGYLAPEYA 760 (933)
Q Consensus 690 ~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~--~~~--~~kl~DfGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~ 760 (933)
+.|+++|+.|||. +||.|||+|++|||+. +|+ ...|+|||++--..... ........|...-||||+.
T Consensus 347 laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 9999999999998 9999999999999993 444 47899999865322211 1112334688889999988
Q ss_pred CCCC------CCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHH
Q 002346 761 ATGR------VTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRV 834 (933)
Q Consensus 761 ~~~~------~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 834 (933)
...+ --.|+|.|+.|.+.||+++...||+...+... +...+... .-..+++.+.+ .+
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-~~r~Yqe~---qLPalp~~vpp-------------~~ 486 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-DTRTYQES---QLPALPSRVPP-------------VA 486 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-chhhhhhh---hCCCCcccCCh-------------HH
Confidence 5432 23589999999999999999999987432211 11111111 11223333322 35
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHh
Q 002346 835 AELAGHCTAREPQQRPDMGHAVNVLG 860 (933)
Q Consensus 835 ~~li~~cl~~~P~~RPs~~evl~~L~ 860 (933)
.+++...++.||.+|++..-+...|.
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHHH
Confidence 58999999999999998876666554
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=4.8e-21 Score=174.38 Aligned_cols=178 Identities=25% Similarity=0.355 Sum_probs=149.1
Q ss_pred cCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEE
Q 002346 184 DSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDL 263 (933)
Q Consensus 184 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L 263 (933)
.++.+.+.|.|++|+++ .+|..++. +.+|+.|++++|+++..+++++.+++|+.|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~------------------------l~nlevln~~nnqie~lp~~issl~klr~l 84 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAE------------------------LKNLEVLNLSNNQIEELPTSISSLPKLRIL 84 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHH------------------------hhhhhhhhcccchhhhcChhhhhchhhhhe
Confidence 35677888999999998 77777665 899999999999999999999999999999
Q ss_pred EccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCC
Q 002346 264 SLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYP 343 (933)
Q Consensus 264 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (933)
+++-|++. ..|..|+.++.|+.|||++|++...
T Consensus 85 nvgmnrl~-~lprgfgs~p~levldltynnl~e~---------------------------------------------- 117 (264)
T KOG0617|consen 85 NVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNEN---------------------------------------------- 117 (264)
T ss_pred ecchhhhh-cCccccCCCchhhhhhccccccccc----------------------------------------------
Confidence 99999999 8999999999999999999998731
Q ss_pred ccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEecc
Q 002346 344 AILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVS 423 (933)
Q Consensus 344 ~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls 423 (933)
.+|+.+..++.|+.|+|+.|.+. .+|+.+++|++|+.|.+.+|.+. .+|.+++.|..|+.|.++
T Consensus 118 --------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 118 --------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred --------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 23555556677888888888887 68888999999999999999998 889999999999999999
Q ss_pred CCcCcccCCCCCCCc-----ccccCCCCCCc
Q 002346 424 NNNLSGKVPDFGSNV-----KFTVSPGNPFI 449 (933)
Q Consensus 424 ~N~l~g~~p~~~~~~-----~~~~~~~n~~~ 449 (933)
+|+|+-.+|++++.- +....+.|||.
T Consensus 182 gnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 182 GNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred cceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 999998888876422 22345688884
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1.9e-20 Score=170.46 Aligned_cols=164 Identities=35% Similarity=0.511 Sum_probs=139.4
Q ss_pred CCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCC
Q 002346 107 PSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSF 186 (933)
Q Consensus 107 p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 186 (933)
|.+.++.+.+.|.||+|+++.+|+. +..+.+|+.|++++|+++. +|..++.+++|+.|++.-|++.- .|..|+.+
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqie~---lp~~issl~klr~lnvgmnrl~~-lprgfgs~ 101 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQIEE---LPTSISSLPKLRILNVGMNRLNI-LPRGFGSF 101 (264)
T ss_pred ccccchhhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchhhh---cChhhhhchhhhheecchhhhhc-CccccCCC
Confidence 4455666677777777777777776 7777888888888888777 78888899999999999888854 48999999
Q ss_pred CCCCEEEccCCcCCC-CCCccccccccchhhcccccCCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEc
Q 002346 187 SNLQNLRLSYNNFTG-SLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSL 265 (933)
Q Consensus 187 ~~L~~L~L~~N~l~~-~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L 265 (933)
+.|+.|||.+|++.. .+|..|+. ++.|+.|+|++|.+.-.+|+++.+++|+.|.+
T Consensus 102 p~levldltynnl~e~~lpgnff~------------------------m~tlralyl~dndfe~lp~dvg~lt~lqil~l 157 (264)
T KOG0617|consen 102 PALEVLDLTYNNLNENSLPGNFFY------------------------MTTLRALYLGDNDFEILPPDVGKLTNLQILSL 157 (264)
T ss_pred chhhhhhccccccccccCCcchhH------------------------HHHHHHHHhcCCCcccCChhhhhhcceeEEee
Confidence 999999999999874 56877765 88899999999999999999999999999999
Q ss_pred cCCcccccCcccccCCCCCCEEEccCccCccCCCC
Q 002346 266 RDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL 300 (933)
Q Consensus 266 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 300 (933)
.+|.+- .+|..++.++.|++|.+.+|+++-.+|.
T Consensus 158 rdndll-~lpkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 158 RDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred ccCchh-hCcHHHHHHHHHHHHhcccceeeecChh
Confidence 999998 8999999999999999999999966653
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.75 E-value=4.1e-18 Score=187.80 Aligned_cols=215 Identities=23% Similarity=0.398 Sum_probs=161.5
Q ss_pred HHhcCCCcceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCe-Eec
Q 002346 633 LTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSF-IHR 711 (933)
Q Consensus 633 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~ 711 (933)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.. ....++|.....+++++++|++|+|+ .+| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN----EDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc----cccCccHHHHHHHHHHHHHHHHHHhc---Ccceeee
Confidence 3567899999999999999999999999999999999965 23568999999999999999999998 344 899
Q ss_pred CCCCCcEEecCCCcEEEecccccccCCCC-CceeecccccccCcccccccCCC-------CCCCccchHhHHHHHHHHHc
Q 002346 712 DLKPSNILIGDDMRAKVADFGLVKNAPDG-KYSVETRLAGTFGYLAPEYAATG-------RVTTKIDVYAFGVVLMETIT 783 (933)
Q Consensus 712 Dik~~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~SlG~~l~ellt 783 (933)
.++++|.++|....+|++|||+....... .........-..-|.|||.+... ..+.+.||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 99999999999999999999997755421 11111112234579999988653 14678999999999999999
Q ss_pred CCCCCCCCCCchh-hHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 002346 784 GRKALDDTMPDDR-AHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 862 (933)
Q Consensus 784 G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~L~~~ 862 (933)
.+.||+....... ..++.++.. .....+.|.+.... +...++..++..||..+|.+||+++++-..++.+
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKK------GGSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred ccCccccccccCChHHHHHHHHh------cCCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 9999987432221 222222211 11222233332111 2223678999999999999999999998877665
Q ss_pred h
Q 002346 863 V 863 (933)
Q Consensus 863 ~ 863 (933)
.
T Consensus 225 ~ 225 (484)
T KOG1023|consen 225 N 225 (484)
T ss_pred c
Confidence 4
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1e-17 Score=168.72 Aligned_cols=135 Identities=19% Similarity=0.253 Sum_probs=105.3
Q ss_pred CccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-----CCCcceeEEeEeeeCc---e-
Q 002346 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-----RHRHLVALLGYCINGS---E- 653 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~- 653 (933)
+...+.||+|+||.||. ...++.. +||++.... ....+.+.+|+.+++.+ .||||++++|++.++. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34567899999999996 4444444 799887643 23456799999999999 5799999999998763 3
Q ss_pred eEEEEee--cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHH-HHhhhccCCCeEecCCCCCcEEecC----CCcE
Q 002346 654 RLLVYEY--MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV-EYLHSLAQQSFIHRDLKPSNILIGD----DMRA 726 (933)
Q Consensus 654 ~~lv~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dik~~Nill~~----~~~~ 726 (933)
..+|+|| +.+++|.+++.+ ..+++. ..++.+++.++ +|||+ ++|+||||||+|||++. ++.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~------~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQ------CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEecCCCCcchhHHHHHHc------ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcE
Confidence 3378999 557999999954 224444 35677888777 99999 89999999999999974 3479
Q ss_pred EEeccc
Q 002346 727 KVADFG 732 (933)
Q Consensus 727 kl~DfG 732 (933)
+|+||+
T Consensus 149 ~LiDg~ 154 (210)
T PRK10345 149 VVCDNI 154 (210)
T ss_pred EEEECC
Confidence 999954
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=2.2e-19 Score=197.73 Aligned_cols=280 Identities=22% Similarity=0.256 Sum_probs=149.0
Q ss_pred EEEecCCCCc-cccCccccCCcccceeeccccccccc----CC-CccCcCcCceeccccccccCCC------CCcccCCC
Q 002346 70 TISLAKSGLS-GTLSPEISSLTQLETLSFQMNNIAGA----IP-SLANATSLQDIYLDNNNFTSVP------TGCFDGLT 137 (933)
Q Consensus 70 ~L~l~~~~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~----~p-~~~~l~~L~~L~Ls~N~l~~~~------~~~~~~l~ 137 (933)
.|+|..+.++ ......+..+..|+.|+++++.++.. ++ .+...++|++|+++++.+...+ ...+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 23344555666677777777777432 22 3555666777777777665311 12344566
Q ss_pred CCCEEEccCCCCCCCCCCCccccCCcc---CCeeeccCcccCC----CCChhhcCC-CCCCEEEccCCcCCCCCCccccc
Q 002346 138 NLQVLSLSDNPNLAPWPFPNELTKSTS---LTTLYMDNANIFG----LIPDFFDSF-SNLQNLRLSYNNFTGSLPASFAK 209 (933)
Q Consensus 138 ~L~~L~Ls~N~~~~~~~~p~~~~~l~~---L~~L~L~~n~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~ 209 (933)
+|+.|+|++|.+.. ..+..+..+.. |++|++++|++.. .+...+..+ ++|+.|+|++|.+++.....+..
T Consensus 82 ~L~~L~l~~~~~~~--~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 82 GLQELDLSDNALGP--DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred ceeEEEccCCCCCh--hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 66666666666553 23333333333 6666666666552 222334444 56666666666665422222111
Q ss_pred cccchhhcccccCCcccccccccCCccCcEEEecCCccCCCC-----CCCCCCCCCCEEEccCCccccc----CcccccC
Q 002346 210 SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-----PDLSKCESLFDLSLRDNQLTGV----VPASVIS 280 (933)
Q Consensus 210 ~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~-----~~~~~~~~L~~L~L~~N~l~~~----~p~~l~~ 280 (933)
.+..+++|+.|+|++|.+++.. ..+..+++|+.|+|++|.+++. ++..+..
T Consensus 160 --------------------~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 160 --------------------ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred --------------------HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 1233455666666666665311 1133445666666666665432 2233444
Q ss_pred CCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCC
Q 002346 281 LPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWP 360 (933)
Q Consensus 281 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p 360 (933)
+++|++|++++|.+++... ..+. ..++
T Consensus 220 ~~~L~~L~ls~n~l~~~~~----------------------------------~~l~-------------------~~~~ 246 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGA----------------------------------AALA-------------------SALL 246 (319)
T ss_pred cCCCCEEecCCCcCchHHH----------------------------------HHHH-------------------HHHh
Confidence 5556666666665553100 0000 0000
Q ss_pred ccccCCCceeEEEccCcccc----CcCchhhcCcccCCeEecccCcccCC----CCcccCCC-CCcCEEeccCCcC
Q 002346 361 FVTCSQGRIITINLANKLLA----GNISPAYANLTSLKNLYLQQNNLTGP----IPDGLTKL-ASLQNLDVSNNNL 427 (933)
Q Consensus 361 ~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l-~~L~~l~ls~N~l 427 (933)
...+.|+.|++++|.++ ..+...+..+++|++|++++|+++.. +...+... +.|+.+|+.+|++
T Consensus 247 ---~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 247 ---SPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred ---ccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 01246777777777775 22445566667777778877777743 44445445 6777777777764
No 443
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=4.8e-17 Score=168.31 Aligned_cols=145 Identities=17% Similarity=0.157 Sum_probs=112.9
Q ss_pred cCCccCCccccCCCeEEEEEE--eCCCcEEEEEEeccccCCch----------------------hHHHHHHHHHHHHhc
Q 002346 581 DNFSEANILGRGGFGVVYGGE--LPDGTKIAVKRMESNTMGNK----------------------GLSEFQAEIAVLTKV 636 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~~----------------------~~~~~~~E~~~l~~l 636 (933)
.-|.+.+.||+|+||.||+|. ..+|+.||+|+++....... ....+.+|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999997 56899999999875421100 113467899999999
Q ss_pred CCC--cceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCC-eEecCC
Q 002346 637 RHR--HLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS-FIHRDL 713 (933)
Q Consensus 637 ~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Di 713 (933)
.+. .+.+++++ ...++||||+++++|...... .......+...++.|++.++++||+ .+ |+||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Di 175 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDL 175 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCC
Confidence 753 34455543 234899999999888765422 1345566778999999999999998 88 999999
Q ss_pred CCCcEEecCCCcEEEecccccccCC
Q 002346 714 KPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 714 k~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+||+++ ++.++|+|||.+....
T Consensus 176 kp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred ChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999 8899999999887543
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=3.3e-17 Score=192.93 Aligned_cols=196 Identities=23% Similarity=0.316 Sum_probs=156.5
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC---CCcceeEEeEeeeCc
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR---HRHLVALLGYCINGS 652 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 652 (933)
.+.-.+.|.+.+.||+|+||.||+|...+|+.||+|+=+... .. +|.-=.+++.+|+ -+.|..+..++...+
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~W----EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PW----EFYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC-ce----eeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 344467899999999999999999988789999999766542 11 2323334455555 234555555566667
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEec-------CCCc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-------DDMR 725 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~-------~~~~ 725 (933)
..++|+||.+.|+|.+++.. .+..+|.-++.++.|+++.+++||. .+||||||||+|++|. +...
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred cceeeeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccc
Confidence 77999999999999999963 4568999999999999999999999 8999999999999994 2346
Q ss_pred EEEecccccccC---CCCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCC
Q 002346 726 AKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRK 786 (933)
Q Consensus 726 ~kl~DfGla~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~ 786 (933)
++|+|||.+... +++ ......++|-.+-.+|...+..+++.+|.|.++.+++-|+.|++
T Consensus 840 l~lIDfG~siDm~lfp~~--~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEEEecccceeeeEcCCC--cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999988633 333 23345678889999999999999999999999999999999973
No 445
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.2e-16 Score=162.14 Aligned_cols=146 Identities=21% Similarity=0.195 Sum_probs=113.4
Q ss_pred HHHHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCc--------------------hhHHHHHHHHHHHHh
Q 002346 576 LRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGN--------------------KGLSEFQAEIAVLTK 635 (933)
Q Consensus 576 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~E~~~l~~ 635 (933)
+......|.+.+.||+|+||.||++..++|+.||||++....... .....+..|..++..
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 333344588889999999999999988889999999876542110 011236788999999
Q ss_pred cCCC--cceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCC
Q 002346 636 VRHR--HLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713 (933)
Q Consensus 636 l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 713 (933)
+.|+ .+++.++. ...++||||+++++|...... .....++.++++++.++|+ .+|+||||
T Consensus 90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl 151 (198)
T cd05144 90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK---HGIIHGDL 151 (198)
T ss_pred HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH---CCCCcCCC
Confidence 9877 44555543 345899999999998765421 2346788999999999999 89999999
Q ss_pred CCCcEEecCCCcEEEecccccccCCC
Q 002346 714 KPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 714 k~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
||+||++++++.++|+|||++.....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999865443
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.8e-16 Score=162.96 Aligned_cols=136 Identities=21% Similarity=0.350 Sum_probs=114.8
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCch------hHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK------GLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
+.||+|++|.||+|.. +|..|++|+......... ...++.+|+.++..++|++|+....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 778899998664432211 234678899999999999998887777777888999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
++|++|.+++.. ..+ ++..++.+++.+++++|+ .+++|||++|+||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~--------~~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINS--------NGM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHh--------ccH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999854 112 788999999999999998 8999999999999999 78899999998764
No 447
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=1.1e-18 Score=192.17 Aligned_cols=260 Identities=22% Similarity=0.215 Sum_probs=167.1
Q ss_pred eeeccccccccc-CC-CccCcCcCceeccccccccCC----CCCcccCCCCCCEEEccCCCCCC--C--CCCCccccCCc
Q 002346 94 TLSFQMNNIAGA-IP-SLANATSLQDIYLDNNNFTSV----PTGCFDGLTNLQVLSLSDNPNLA--P--WPFPNELTKST 163 (933)
Q Consensus 94 ~L~l~~N~l~~~-~p-~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~~~~--~--~~~p~~~~~l~ 163 (933)
.|+|..+.+++. .. -+..+.+|++|+|++|.++.. ....+...++|+.|++++|.+.. . ..++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 467777777632 22 456667788888888888532 12235566778888888876652 0 01234556677
Q ss_pred cCCeeeccCcccCCCCChhhcCCCC---CCEEEccCCcCCCCCCccccccccchhhcccccCCcccccccccCC-ccCcE
Q 002346 164 SLTTLYMDNANIFGLIPDFFDSFSN---LQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGM-TQLRQ 239 (933)
Q Consensus 164 ~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l-~~L~~ 239 (933)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++.....+. ..+..+ ++|+.
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~--------------------~~l~~~~~~L~~ 141 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLA--------------------KGLKDLPPALEK 141 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHH--------------------HHHHhCCCCceE
Confidence 7777777777776655666655554 77777777777632111111 012234 67777
Q ss_pred EEecCCccCCCCC-----CCCCCCCCCEEEccCCccccc----CcccccCCCCCCEEEccCccCccCCCCCCCCccEEec
Q 002346 240 VWLHKNQFTGPIP-----DLSKCESLFDLSLRDNQLTGV----VPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSL 310 (933)
Q Consensus 240 L~L~~N~l~~~~~-----~~~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l 310 (933)
|+|++|.+++... .+..+.+|+.|+|++|.+++. ++..+..+++|++|+|++|.+++...
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~----------- 210 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA----------- 210 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH-----------
Confidence 7777777774221 245566777777777777632 33344555677777777776653211
Q ss_pred cCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcC-
Q 002346 311 DHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYAN- 389 (933)
Q Consensus 311 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~- 389 (933)
+.++..+..+++|+.|++++|.+++.....+..
T Consensus 211 ----------------------------------------------~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~ 244 (319)
T cd00116 211 ----------------------------------------------SALAETLASLKSLEVLNLGDNNLTDAGAAALASA 244 (319)
T ss_pred ----------------------------------------------HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHH
Confidence 112233455688999999999998754444432
Q ss_pred ----cccCCeEecccCccc----CCCCcccCCCCCcCEEeccCCcCccc
Q 002346 390 ----LTSLKNLYLQQNNLT----GPIPDGLTKLASLQNLDVSNNNLSGK 430 (933)
Q Consensus 390 ----l~~L~~L~L~~N~l~----g~~p~~~~~l~~L~~l~ls~N~l~g~ 430 (933)
.+.|+.|++++|+++ ..+...+..+++|+++++++|.++..
T Consensus 245 ~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 245 LLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 379999999999997 24566777789999999999999854
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.2e-16 Score=160.79 Aligned_cols=133 Identities=23% Similarity=0.383 Sum_probs=108.4
Q ss_pred ccccCCCeEEEEEEeCCCcEEEEEEeccccCCc------hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeec
Q 002346 588 ILGRGGFGVVYGGELPDGTKIAVKRMESNTMGN------KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661 (933)
Q Consensus 588 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 661 (933)
.||+|+||.||+|.+ ++..|++|+........ ....++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999986 67899999865432211 12356788999999999887666555566667779999999
Q ss_pred CCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
+|++|.+++... .. .++.+++++++++|+ .+++|||++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~-----~~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG-----ND-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc-----HH-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999887431 10 789999999999999 8999999999999999 889999999987653
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=6e-17 Score=186.22 Aligned_cols=213 Identities=28% Similarity=0.443 Sum_probs=147.8
Q ss_pred cCCccCCccccCCCeEEEEEEeC-CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEe
Q 002346 581 DNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 659 (933)
.+|..++.|..|+||.||.++.+ ..+.+|.| +.+... +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee-----------------
Confidence 57888999999999999999654 46778884 433211 1110 22222344333
Q ss_pred ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
|+-...++. .++++.. ++.+++|+|+ .+|+|||+||+|.+|+.-|++|+.|||+.+....
T Consensus 136 ----gDc~tllk~-----~g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ----GDCATLLKN-----IGPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ----chhhhhccc-----CCCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 344444422 1334332 2779999999 9999999999999999999999999998763211
Q ss_pred C--------C------ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHH
Q 002346 740 G--------K------YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 740 ~--------~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~ 805 (933)
. . .......+|||.|+|||++....|...+|.|++|+++||.+.|..||++..+++. +..
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel------fg~ 269 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL------FGQ 269 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH------Hhh
Confidence 1 0 0112335899999999999999999999999999999999999999998766543 222
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAV 856 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl 856 (933)
.+.....+++. |..+. .+.++++.++++.+|..|--....+
T Consensus 270 visd~i~wpE~-dea~p---------~Ea~dli~~LL~qnp~~Rlgt~ga~ 310 (1205)
T KOG0606|consen 270 VISDDIEWPEE-DEALP---------PEAQDLIEQLLRQNPLCRLGTGGAL 310 (1205)
T ss_pred hhhhhcccccc-CcCCC---------HHHHHHHHHHHHhChHhhcccchhh
Confidence 22223333333 32222 4677899999999999997444433
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=4.2e-16 Score=182.45 Aligned_cols=142 Identities=23% Similarity=0.313 Sum_probs=114.2
Q ss_pred HHhcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC------chhHHHHHHHHHHHHhcCCCcceeEEeEeeeC
Q 002346 578 QVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG------NKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (933)
Q Consensus 578 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 651 (933)
.....|...+.||+|+||.||+|.+.. ..+++|+....... ....+++.+|+++++.++|++++..+.++...
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 334455678999999999999998744 44555443221111 11235688999999999999999888888777
Q ss_pred ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecc
Q 002346 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (933)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~Df 731 (933)
...++||||+++++|.+++. ....++.+++++++|||+ .+|+||||||+||++ +++.++|+||
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeC
Confidence 78899999999999999883 356789999999999999 899999999999999 6789999999
Q ss_pred cccccC
Q 002346 732 GLVKNA 737 (933)
Q Consensus 732 Gla~~~ 737 (933)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 998753
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=3.7e-17 Score=176.17 Aligned_cols=174 Identities=27% Similarity=0.397 Sum_probs=129.3
Q ss_pred eeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccc
Q 002346 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (933)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfG 732 (933)
..|+.|++|+..+|.+|+.+... ....++.....++.|++.|+.| ++.+|||+||.||+...+..+||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 56899999999999999975333 3457888999999999999999 488999999999999999999999999
Q ss_pred ccccCCCCC-----ceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHh
Q 002346 733 LVKNAPDGK-----YSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVL 807 (933)
Q Consensus 733 la~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~ 807 (933)
+........ ....+..+||..||+||.+.+..|+.|+||||||++++|+++ +|... .+.......+
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~--~er~~t~~d~---- 472 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQ--FERIATLTDI---- 472 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccH--HHHHHhhhhh----
Confidence 987665544 334566789999999999999999999999999999999997 22211 1111111111
Q ss_pred hccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 808 ISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 808 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
..+.++. ... .....=..++.+++.+.|.+||++.+
T Consensus 473 -r~g~ip~----~~~------~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 473 -RDGIIPP----EFL------QDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred -hcCCCCh----HHh------hcCcHHHHHHHHhcCCCcccCchHHH
Confidence 1222221 111 11112247889999999999994433
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=1.1e-14 Score=146.67 Aligned_cols=139 Identities=19% Similarity=0.229 Sum_probs=100.4
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHH----------------------HHHHHHHHhcCCC--cc
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEF----------------------QAEIAVLTKVRHR--HL 641 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~----------------------~~E~~~l~~l~h~--ni 641 (933)
.+.||+|+||.||+|...+++.||||++............+ ..|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 56799999999999988789999999987643222111111 3566666666443 34
Q ss_pred eeEEeEeeeCceeEEEEeecCCCChhhH-hhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 642 VALLGYCINGSERLLVYEYMPRGTLAQH-LFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 642 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
.+.+++ ...++||||++++.+... +... ... .++..++.+++.++.++|. .++|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEE
Confidence 455543 235899999998654322 2110 011 5678899999999999997 3799999999999999
Q ss_pred cCCCcEEEecccccccCC
Q 002346 721 GDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~~~ 738 (933)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999987543
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.9e-14 Score=139.43 Aligned_cols=135 Identities=21% Similarity=0.222 Sum_probs=113.9
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCC--CcceeEEeEeeeCceeEEEEeecC
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH--RHLVALLGYCINGSERLLVYEYMP 662 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~ 662 (933)
+.+.||+|.++.||++... +..+++|....... ...+.+|+..+..++| .++++++++...++..+++|||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEec-CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 4578999999999999874 47899998865532 4678999999999976 589999998888788999999998
Q ss_pred CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccccc
Q 002346 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (933)
Q Consensus 663 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~ 736 (933)
++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 77 g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8766433 4566778899999999999985445799999999999999989999999998764
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2.3e-14 Score=148.80 Aligned_cols=138 Identities=18% Similarity=0.210 Sum_probs=107.0
Q ss_pred CCccc-cCCCeEEEEEEeCCCcEEEEEEeccccC-----------CchhHHHHHHHHHHHHhcCCCcc--eeEEeEeeeC
Q 002346 586 ANILG-RGGFGVVYGGELPDGTKIAVKRMESNTM-----------GNKGLSEFQAEIAVLTKVRHRHL--VALLGYCING 651 (933)
Q Consensus 586 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 651 (933)
...|| .||.|+||++.. .+..++||.+..... +.....++.+|+.++..++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45687 899999999987 478899998854221 11234578899999999998775 6777765432
Q ss_pred c----eeEEEEeecCC-CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcE
Q 002346 652 S----ERLLVYEYMPR-GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (933)
Q Consensus 652 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~ 726 (933)
. ..++||||+++ .+|.+++.. .+++.. .+.++++++++||+ .||+||||||+|||++.++.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~------~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE------APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc------CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCE
Confidence 2 22599999997 689888744 234443 35789999999999 999999999999999999999
Q ss_pred EEecccccccC
Q 002346 727 KVADFGLVKNA 737 (933)
Q Consensus 727 kl~DfGla~~~ 737 (933)
+|+|||.+...
T Consensus 182 ~LIDfg~~~~~ 192 (239)
T PRK01723 182 WLIDFDRGELR 192 (239)
T ss_pred EEEECCCcccC
Confidence 99999987643
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=9.2e-16 Score=178.20 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=189.5
Q ss_pred cCCccCCccccCCCeEEEEEEeC--CCcEEEEEEeccccCCchhHHHHHHHHHHHHhcC-CCcceeEEeEeeeCceeEEE
Q 002346 581 DNFSEANILGRGGFGVVYGGELP--DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 657 (933)
..|.+.+.||+|+|+.|-..... ....+|+|.+...............|..+-..+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 34667778999999999887443 3445677766555433344455566888877776 99999999999999999999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhh-hccCCCeEecCCCCCcEEecCCC-cEEEecccccc
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-SLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVK 735 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dik~~Nill~~~~-~~kl~DfGla~ 735 (933)
.+|.+++++.+.+.. .. ....+....-.+..|+..++.|+| . .++.||||||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~-~~--~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISH-PD--STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCccccccccccccc-CC--ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhc
Confidence 999999999988831 11 113455566778999999999999 6 8999999999999999999 99999999998
Q ss_pred cCCC--CCceeeccccc-ccCcccccccCCC-CCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhccC
Q 002346 736 NAPD--GKYSVETRLAG-TFGYLAPEYAATG-RVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISKE 811 (933)
Q Consensus 736 ~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 811 (933)
.+.. +.........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++.....+ .....|.... .
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~----~ 248 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK----G 248 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc----c
Confidence 6655 44444455678 9999999998874 45678999999999999999999998764433 1222222111 0
Q ss_pred CCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 812 NIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 812 ~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.........+. ....++..+++..+|..|.+..++..
T Consensus 249 ~~~~~~~~~~~---------~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 249 RFTQLPWNSIS---------DQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccccCccccCC---------hhhhhcccccccCCchhccccccccc
Confidence 00001111111 23457788888899999999888764
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=3.8e-14 Score=167.56 Aligned_cols=158 Identities=25% Similarity=0.422 Sum_probs=109.5
Q ss_pred cCCccchHHHHHHHHHhcCCCC-CCCCCCCC-CCCccccceEeCCC-----CCEEEEEecCCCCccccCccccCCcccce
Q 002346 22 TTSLGDDGSVMLKLAQSLQNLP-SDWSSTSS-TGYCEWTGINCDNS-----NRVTTISLAKSGLSGTLSPEISSLTQLET 94 (933)
Q Consensus 22 ~~~~~~d~~~l~~~~~~~~~~~-~~w~~~~~-~~~C~w~gv~c~~~-----~~v~~L~l~~~~l~~~~~~~~~~l~~L~~ 94 (933)
+.+..+|.+||+.+|+++.... .+|..++- ...|.|.||.|... ..|+.|+|++++++|.+|..|+.+++|+.
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~ 446 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQS 446 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcccCCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCE
Confidence 3456689999999999997543 36754210 01137999999631 24788888888888888888888888888
Q ss_pred eecccccccccCC-CccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCc
Q 002346 95 LSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNA 173 (933)
Q Consensus 95 L~l~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n 173 (933)
|+|++|.|+|.+| .+..+++|+.|+|++|+|++ .+|..++++++|+.|+|++|
T Consensus 447 L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg--------------------------~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG--------------------------SIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECCCCCCCC--------------------------CCchHHhcCCCCCEEECcCC
Confidence 8888888887776 56666666666665555554 35556666666666666666
Q ss_pred ccCCCCChhhcCC-CCCCEEEccCCcCCCCCCc
Q 002346 174 NIFGLIPDFFDSF-SNLQNLRLSYNNFTGSLPA 205 (933)
Q Consensus 174 ~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~ 205 (933)
+++|.+|..++.+ .++..+++.+|...+..|.
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccccCCCC
Confidence 7777777776653 4667888888876655553
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.41 E-value=1.1e-12 Score=148.18 Aligned_cols=148 Identities=24% Similarity=0.286 Sum_probs=103.5
Q ss_pred cCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCch--------------------------------------h
Q 002346 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK--------------------------------------G 622 (933)
Q Consensus 581 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~ 622 (933)
..|. .+.||.|++|.||+|++++|+.||||+.+......- .
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 368999999999999999999999999876421000 0
Q ss_pred HHHHHHHHHHHHhcC----CCcceeEEeEe-eeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHH-H
Q 002346 623 LSEFQAEIAVLTKVR----HRHLVALLGYC-INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-G 696 (933)
Q Consensus 623 ~~~~~~E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~-~ 696 (933)
.-+|.+|++.+.+++ |.+-+.+-..+ ......++||||++|++|.++.... .. .. .+..++..+++ .
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~---~~---~~~~ia~~~~~~~ 269 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EA---GL---DRKALAENLARSF 269 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hc---CC---CHHHHHHHHHHHH
Confidence 013556666666662 32223322222 2234578999999999998876431 11 12 23456676666 4
Q ss_pred HHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 697 VEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 697 l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
+..+|. .|++|+|++|.||++++++.++++|||++.....
T Consensus 270 l~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 270 LNQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 678887 8999999999999999999999999999876543
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.40 E-value=6.5e-13 Score=157.09 Aligned_cols=76 Identities=37% Similarity=0.587 Sum_probs=67.7
Q ss_pred CCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCCC
Q 002346 359 WPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF 434 (933)
Q Consensus 359 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 434 (933)
+|..++.+++|+.|+|++|++.|.+|..++.+++|+.|+|++|+|+|.+|..+.+|++|+.|+|++|+|+|.+|..
T Consensus 434 ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~ 509 (623)
T PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA 509 (623)
T ss_pred CCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChH
Confidence 4556777888999999999999999999999999999999999999999999999999999999999999999863
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=3e-14 Score=153.60 Aligned_cols=213 Identities=21% Similarity=0.346 Sum_probs=157.3
Q ss_pred eccccccccCCCCCccc-CCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccC
Q 002346 118 IYLDNNNFTSVPTGCFD-GLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSY 196 (933)
Q Consensus 118 L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 196 (933)
|.|++-++...|...+. .+..-...||+.|++.. +|..+..+-.|+.|.|+.|.+. .+|..+.++..|.+|||+.
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~e---lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSE---LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhcccccccc---CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 44555555555544433 34555677888888877 7888888888888888888874 4588888999999999999
Q ss_pred CcCCCCCCccccccccchhhcccccCCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcc
Q 002346 197 NNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPA 276 (933)
Q Consensus 197 N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 276 (933)
|+++ .+|..++. + -|+.|-+++|+++..++.++.+.+|..||.+.|.+. .+|.
T Consensus 131 NqlS-~lp~~lC~------------------------l-pLkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slps 183 (722)
T KOG0532|consen 131 NQLS-HLPDGLCD------------------------L-PLKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPS 183 (722)
T ss_pred chhh-cCChhhhc------------------------C-cceeEEEecCccccCCcccccchhHHHhhhhhhhhh-hchH
Confidence 9998 88877764 2 488888888888888888888888888888888888 7888
Q ss_pred cccCCCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCC
Q 002346 277 SVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNAC 356 (933)
Q Consensus 277 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 356 (933)
.++++.+|+.|.+..|.+...
T Consensus 184 ql~~l~slr~l~vrRn~l~~l----------------------------------------------------------- 204 (722)
T KOG0532|consen 184 QLGYLTSLRDLNVRRNHLEDL----------------------------------------------------------- 204 (722)
T ss_pred HhhhHHHHHHHHHhhhhhhhC-----------------------------------------------------------
Confidence 888888888888888887642
Q ss_pred CCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCC---cCEEeccCCc
Q 002346 357 DGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLAS---LQNLDVSNNN 426 (933)
Q Consensus 357 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---L~~l~ls~N~ 426 (933)
|.+++ .-.|..||+|.|+++ .||..|.+|+.|++|-|.+|-|. ..|..++..-. .++|+..-.+
T Consensus 205 ---p~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 205 ---PEELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ---CHHHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 33333 225667777777776 57777888888888888888877 66666654333 3566665554
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.6e-12 Score=131.47 Aligned_cols=204 Identities=22% Similarity=0.312 Sum_probs=140.5
Q ss_pred HHHHhcCCCcceeEEeEeeeC-----ceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccC
Q 002346 631 AVLTKVRHRHLVALLGYCING-----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQ 705 (933)
Q Consensus 631 ~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 705 (933)
.-+-++-|.|||++..|+.+. .+..++.|||+-|++.++|++.+.. ...+......+++.||..||.|||+ |.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 345556799999999887543 3567899999999999999885544 4667888888999999999999998 67
Q ss_pred CCeEecCCCCCcEEecCCCcEEEecccccccCC---CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHH
Q 002346 706 QSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP---DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETI 782 (933)
Q Consensus 706 ~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~ell 782 (933)
.+|+|+++.-+-|++..++-+|+.----..... .........-.|-++|.|||+-.....+-++|||+||....||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 899999999999999999988874211100000 00001112234678999999887777888999999999999999
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 783 TGRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 783 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
.+..--..... ....-.. +...... ....+. ..++..|++..|..||+|.+++.
T Consensus 277 ilEiq~tnseS-~~~~ee~-ia~~i~~-------len~lq------------r~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSES-KVEVEEN-IANVIIG-------LENGLQ------------RGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcc-eeehhhh-hhhheee-------ccCccc------------cCcCcccccCCCCCCcchhhhhc
Confidence 88743211110 0000000 0111110 001111 25788999999999999998653
No 461
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=1.9e-12 Score=143.13 Aligned_cols=250 Identities=23% Similarity=0.251 Sum_probs=180.7
Q ss_pred cCCccCCcccc--CCCeEEEEEEe---CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCcee
Q 002346 581 DNFSEANILGR--GGFGVVYGGEL---PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSER 654 (933)
Q Consensus 581 ~~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 654 (933)
..|.+.+.+|. |.+|.||.+.. .++..+|+|+-+..........+=.+|+...+.+ .|++.++.+..+..++..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34667788999 99999999854 5788999997444332233233345666666667 499999999999999999
Q ss_pred EEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHH----HHHHhhhccCCCeEecCCCCCcEEecCC-CcEEEe
Q 002346 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR----GVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVA 729 (933)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~ 729 (933)
++-.|++ +.+|.++.+... .-++....+.+..+..+ |+.++|+ ..++|-|+||.||++..+ ...++.
T Consensus 194 fiqtE~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred eeeeccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecC
Confidence 9999998 578888876521 23566777778888888 9999999 899999999999999999 889999
Q ss_pred cccccccCCCCCce----eecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHH
Q 002346 730 DFGLVKNAPDGKYS----VETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRR 805 (933)
Q Consensus 730 DfGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~ 805 (933)
|||+.....++... ......|...|++||... +.++.++|+|++|.++.+..++..+...... ..|.+-
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~~ 338 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQL 338 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC------CCcccc
Confidence 99999877765522 223346888999999876 6788999999999999999998765533200 011110
Q ss_pred HhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002346 806 VLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVN 857 (933)
Q Consensus 806 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~ 857 (933)
....++ .+++.....++...+..+++.+|..|++.+.+..
T Consensus 339 ---r~~~ip---------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 ---RQGYIP---------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---ccccCc---------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 000011 1111111223445888999999999998877654
No 462
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.34 E-value=3.8e-14 Score=152.78 Aligned_cols=196 Identities=23% Similarity=0.323 Sum_probs=153.2
Q ss_pred EEecCCCCcccc-CccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCC
Q 002346 71 ISLAKSGLSGTL-SPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPN 149 (933)
Q Consensus 71 L~l~~~~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~ 149 (933)
|.|++..+.... +.+=-.+..-...||+.|++..++..+..+-.|..|.|+.|.|..++.. +.++..|.+|||+.|++
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~-i~~L~~lt~l~ls~Nql 133 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEA-ICNLEALTFLDLSSNQL 133 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchh-hhhhhHHHHhhhccchh
Confidence 455555554211 1111456677778888888886655777777788888888888887765 77888888888888888
Q ss_pred CCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccccc
Q 002346 150 LAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLD 229 (933)
Q Consensus 150 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~ 229 (933)
.. +|..+..|+ |+.|-+++|+++. +|+.++.+..|..||.+.|.+. .+|..++
T Consensus 134 S~---lp~~lC~lp-Lkvli~sNNkl~~-lp~~ig~~~tl~~ld~s~nei~-slpsql~--------------------- 186 (722)
T KOG0532|consen 134 SH---LPDGLCDLP-LKVLIVSNNKLTS-LPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG--------------------- 186 (722)
T ss_pred hc---CChhhhcCc-ceeEEEecCcccc-CCcccccchhHHHhhhhhhhhh-hchHHhh---------------------
Confidence 77 677777765 8888888888844 4777888888888888888887 7776654
Q ss_pred cccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCC
Q 002346 230 VLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299 (933)
Q Consensus 230 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 299 (933)
++.+|+.|.+..|++...++++. .-.|..||+|.|++. .+|-.|.+|..|++|-|.+|.|+.++.
T Consensus 187 ---~l~slr~l~vrRn~l~~lp~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 187 ---YLTSLRDLNVRRNHLEDLPEELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred ---hHHHHHHHHHhhhhhhhCCHHHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChH
Confidence 48899999999999999888887 556889999999999 899999999999999999999996443
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=1.6e-12 Score=147.41 Aligned_cols=63 Identities=32% Similarity=0.528 Sum_probs=37.5
Q ss_pred ceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcCcccCCC
Q 002346 368 RIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (933)
Q Consensus 368 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 433 (933)
++..|.+.+|++.. ++..++.++.|++|++++|+++ .++. +..+.+|+.|++++|.++..+|.
T Consensus 233 ~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 233 NLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccccccCCceeee-ccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchh
Confidence 33334444444432 2455666666777777777776 4444 66677777777777777766664
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.31 E-value=1.8e-12 Score=146.95 Aligned_cols=196 Identities=29% Similarity=0.432 Sum_probs=108.6
Q ss_pred eeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCC-CCCEEEccCCCCCCCCCCCccccCCccCCeeeccC
Q 002346 94 TLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLT-NLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDN 172 (933)
Q Consensus 94 ~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~ 172 (933)
.|+++.|.+...+..+..++.++.|++.+|.++.+++. ...++ +|+.|++++|++.. +|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~-~~~~~~nL~~L~l~~N~i~~---l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPL-IGLLKSNLKELDLSDNKIES---LPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccc-cccchhhcccccccccchhh---hhhhhhccccccccccCC
Confidence 45555555544444444555666666666666665553 33332 56666666666555 445566666666666666
Q ss_pred cccCCCCChhhcCCCCCCEEEccCCcCCCCCCcccccc-ccchhhcccccCCcccccccccCCccCcEEEecCCccCCCC
Q 002346 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKS-DIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (933)
Q Consensus 173 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 251 (933)
|++... |...+.+++|+.|++++|+++ .+|...... .+.++.+..|.+ ...+..+..++++..|.+.+|++...+
T Consensus 173 N~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~--~~~~~~~~~~~~l~~l~l~~n~~~~~~ 248 (394)
T COG4886 173 NDLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSI--IELLSSLSNLKNLSGLELSNNKLEDLP 248 (394)
T ss_pred chhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcc--eecchhhhhcccccccccCCceeeecc
Confidence 666544 333335566666666666666 555543221 133333333320 001112334566666666777666554
Q ss_pred CCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCC
Q 002346 252 PDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299 (933)
Q Consensus 252 ~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 299 (933)
..+..+++|+.|++++|+++ .++. +..+.+|+.|++++|.+....|
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred chhccccccceecccccccc-cccc-ccccCccCEEeccCccccccch
Confidence 45666666777777777776 3333 6666677777777777665544
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.29 E-value=3.7e-12 Score=145.03 Aligned_cols=151 Identities=21% Similarity=0.258 Sum_probs=98.6
Q ss_pred HHHhcCCccCCccccCCCeEEEEEEeCC-CcEEEEEEeccccCC---------------------------c-----hhH
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMG---------------------------N-----KGL 623 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------------~-----~~~ 623 (933)
..+...|+. +.||.|++|.||+|.+++ |+.||||+.++.... . +..
T Consensus 116 ~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 116 EEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred HHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 344566776 899999999999999887 999999999764210 0 001
Q ss_pred ------HHHHHHHHHHHhcC----CCcceeEEeEeee-CceeEEEEeecCCCChhhHhhhcccCCC--CCCCHHHHHHHH
Q 002346 624 ------SEFQAEIAVLTKVR----HRHLVALLGYCIN-GSERLLVYEYMPRGTLAQHLFEWHDHGY--TPLTWKQRVTIA 690 (933)
Q Consensus 624 ------~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~ 690 (933)
-+|.+|+..+.+++ +...+.+-..+.+ ....++||||++|+.+.+.-.- ...+. ..+....+..++
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHHHHHHH
Confidence 12455665555553 3333333333322 3566899999999999874211 11110 122233333333
Q ss_pred HHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC----cEEEecccccccCCC
Q 002346 691 LDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM----RAKVADFGLVKNAPD 739 (933)
Q Consensus 691 ~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~----~~kl~DfGla~~~~~ 739 (933)
.|+ .. .|++|+|+||.||+++.++ .++++|||++.....
T Consensus 274 ~Qi-------f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQV-------FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH-------Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 333 33 7999999999999999888 999999999886654
No 466
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.24 E-value=1.3e-10 Score=114.81 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=100.6
Q ss_pred CCccccCCCeEEEEEEeCC-------CcEEEEEEeccccCC----------c----------hhHHHH----HHHHHHHH
Q 002346 586 ANILGRGGFGVVYGGELPD-------GTKIAVKRMESNTMG----------N----------KGLSEF----QAEIAVLT 634 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~----------~----------~~~~~~----~~E~~~l~ 634 (933)
...||.|--+.||.|...+ +..+|||+.+..... + ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999996543 579999977543210 0 012223 38999999
Q ss_pred hcCC--CcceeEEeEeeeCceeEEEEeecCCCChhh-HhhhcccCCCCCCCHHHHHHHHHHHHHHHHHh-hhccCCCeEe
Q 002346 635 KVRH--RHLVALLGYCINGSERLLVYEYMPRGTLAQ-HLFEWHDHGYTPLTWKQRVTIALDVARGVEYL-HSLAQQSFIH 710 (933)
Q Consensus 635 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH 710 (933)
++.. -++.+++++ ...++||||+.+..+.. .+.+ ..++..+...+..+++.++.++ |. .+|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~---~glVH 148 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVH 148 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 9953 466677765 45689999997654432 2322 2345566778889999999999 77 89999
Q ss_pred cCCCCCcEEecCCCcEEEecccccccCC
Q 002346 711 RDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 711 ~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
||+++.||+++ ++.+.|+|||.+....
T Consensus 149 GDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 149 ADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999999997 4679999999877554
No 467
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.4e-11 Score=119.05 Aligned_cols=130 Identities=20% Similarity=0.143 Sum_probs=96.0
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcce-eEEeEeeeCceeEEEEeecCCC
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLV-ALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g 664 (933)
++.|+.|.++.||++.. .++.|++|....... ....+..|+.+++.+.+.+++ +++.+. ....++||||+++.
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCC
Confidence 46789999999999987 478899998765421 123567899999998655544 455443 33458999999998
Q ss_pred ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcc--CCCeEecCCCCCcEEecCCCcEEEecccccc
Q 002346 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA--QQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dik~~Nill~~~~~~kl~DfGla~ 735 (933)
++.+.- .....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 77 ~l~~~~-------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 77 ELLTED-------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccccc-------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 775430 011345789999999999831 12369999999999999 6689999999865
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.21 E-value=3.9e-10 Score=125.82 Aligned_cols=167 Identities=17% Similarity=0.215 Sum_probs=127.4
Q ss_pred EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCC
Q 002346 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTP 680 (933)
Q Consensus 601 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 680 (933)
+..++.+|.|+..+.... .......+-++.++.++||||+++++.++.++..|+|+|-+. .|..++.+
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------- 100 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------- 100 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------
Confidence 455788899988876532 334556778889999999999999999999999999999874 57777754
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCCceeecccccccCccccccc
Q 002346 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760 (933)
Q Consensus 681 l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 760 (933)
+........+.||+.||.+||+ ..+++|++|..+.|+++..|+.||++|-++........ ......---.|..|+.+
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEI 177 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhc
Confidence 3456777789999999999997 38999999999999999999999999988764432211 00011111245566654
Q ss_pred CCCCCCCccchHhHHHHHHHHHcC
Q 002346 761 ATGRVTTKIDVYAFGVVLMETITG 784 (933)
Q Consensus 761 ~~~~~~~~~Dv~SlG~~l~elltG 784 (933)
.... -..|.|.||++++|++.|
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCc
Confidence 3322 346999999999999999
No 469
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=3e-10 Score=107.56 Aligned_cols=134 Identities=25% Similarity=0.348 Sum_probs=103.7
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCch------hHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEEee
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK------GLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 660 (933)
..+++|+-+.+|.+.+. |.++++|.-.+...-.. ...+-.+|++++.+++--.|...+-+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46899999999999774 44577775433322211 134567899999999766666666666777888999999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
++|..|.+.+... ...++..+-+-+.-||. .+|||+|+.++||++..+. +.++|||++...
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999898541 35677888888899998 9999999999999997765 999999998743
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=6.3e-12 Score=125.24 Aligned_cols=134 Identities=25% Similarity=0.261 Sum_probs=101.6
Q ss_pred CCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccEEeccC
Q 002346 233 GMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDH 312 (933)
Q Consensus 233 ~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~ 312 (933)
.++.|++|||++|.|+..-.++.-.++++.|++|+|.|.. +- .+..+++|+.||||+|.++..
T Consensus 282 TWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls~~--------------- 344 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLAEC--------------- 344 (490)
T ss_pred hHhhhhhccccccchhhhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhHhh---------------
Confidence 3567888888888888776677777888888888888873 32 377788888888888887732
Q ss_pred CcCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCccc
Q 002346 313 NNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTS 392 (933)
Q Consensus 313 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 392 (933)
-++-..+.++++|+|+.|.|.. -..++.|-+
T Consensus 345 -----------------------------------------------~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYS 375 (490)
T KOG1259|consen 345 -----------------------------------------------VGWHLKLGNIKTLKLAQNKIET--LSGLRKLYS 375 (490)
T ss_pred -----------------------------------------------hhhHhhhcCEeeeehhhhhHhh--hhhhHhhhh
Confidence 1223345678888888887752 234677788
Q ss_pred CCeEecccCcccCCC-CcccCCCCCcCEEeccCCcCcccCC
Q 002346 393 LKNLYLQQNNLTGPI-PDGLTKLASLQNLDVSNNNLSGKVP 432 (933)
Q Consensus 393 L~~L~L~~N~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~~p 432 (933)
|..||+++|+|.... -..+++||-|+++.|.+|+|.+.+.
T Consensus 376 LvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 376 LVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred heeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 999999999998432 3578999999999999999998765
No 471
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.13 E-value=2.5e-11 Score=140.61 Aligned_cols=251 Identities=24% Similarity=0.272 Sum_probs=171.7
Q ss_pred hcCCccCCccccCCCeEEEEEEe-CCCcEEEEEEeccccCCc-hhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEE
Q 002346 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 657 (933)
.+.+.+.+.+-.|.++.++.+.- ..|...+.|+......-. ...+...++-.+.-..+||-++....-+......++|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 35667778899999999998743 234444555443332111 1122333333333334567777666655667788999
Q ss_pred EeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccC
Q 002346 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (933)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~ 737 (933)
++|..+++|...++. .+..+..-.......+..+.+|||+ ..+.|||++|.|.+...+++.++.|||.....
T Consensus 883 ~~~~~~~~~~Skl~~-----~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHN-----SGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hHHhccCCchhhhhc-----CCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccc
Confidence 999999999999866 2345666667777888899999998 66999999999999999999999999843211
Q ss_pred CC---------------------C---------CceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCCC
Q 002346 738 PD---------------------G---------KYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRKA 787 (933)
Q Consensus 738 ~~---------------------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p 787 (933)
.. . +........||+.|.|||...+......+|.|++|+.++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 10 0 00112235699999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002346 788 LDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGH 854 (933)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~e 854 (933)
|....++... +.+......++ ........+..+++...+..+|.+|-.|..
T Consensus 1035 ~na~tpq~~f------~ni~~~~~~~p----------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~ 1085 (1205)
T KOG0606|consen 1035 FNAETPQQIF------ENILNRDIPWP----------EGPEEGSYEAQDLINRLLTEEPTQRLGAKG 1085 (1205)
T ss_pred CCCcchhhhh------hccccCCCCCC----------CCccccChhhhhhhhhhhccCchhccCccc
Confidence 9887664331 11111111111 111122234568888899999999987763
No 472
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=3.3e-11 Score=116.62 Aligned_cols=86 Identities=28% Similarity=0.400 Sum_probs=18.1
Q ss_pred ccCcCcCceeccccccccCCCCCccc-CCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCC
Q 002346 109 LANATSLQDIYLDNNNFTSVPTGCFD-GLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFS 187 (933)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 187 (933)
+.+..++++|+|.+|.|+.|.. ++ .+.+|+.|+|++|.+.. + +.+..++.|+.|++++|+|+...+.....++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~---l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITK---L-EGLPGLPRLKTLDLSNNRISSISEGLDKNLP 88 (175)
T ss_dssp ---------------------S----TT-TT--EEE-TTS--S------TT----TT--EEE--SS---S-CHHHHHH-T
T ss_pred cccccccccccccccccccccc--hhhhhcCCCEEECCCCCCcc---c-cCccChhhhhhcccCCCCCCccccchHHhCC
Confidence 4444455666666666655432 33 35556666666665555 2 2344555556666666665544222223456
Q ss_pred CCCEEEccCCcCC
Q 002346 188 NLQNLRLSYNNFT 200 (933)
Q Consensus 188 ~L~~L~L~~N~l~ 200 (933)
+|++|+|++|+|.
T Consensus 89 ~L~~L~L~~N~I~ 101 (175)
T PF14580_consen 89 NLQELYLSNNKIS 101 (175)
T ss_dssp T--EEE-TTS---
T ss_pred cCCEEECcCCcCC
Confidence 6666666666665
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1.4e-11 Score=122.91 Aligned_cols=185 Identities=23% Similarity=0.287 Sum_probs=128.3
Q ss_pred CccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCC----C-------------------cccCCCCC
Q 002346 83 SPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPT----G-------------------CFDGLTNL 139 (933)
Q Consensus 83 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~----~-------------------~~~~l~~L 139 (933)
|-.+.-+.+|..+.++.+.-..+..-...-+.|++|.+.+..++..+. . .......|
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~L 286 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQEL 286 (490)
T ss_pred ccchHHhhhhheeeeeccchhheeceeecCchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhh
Confidence 334445566666666665433222111122556666666655543211 0 01123468
Q ss_pred CEEEccCCCCCCCCCCCccccCCccCCeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhccc
Q 002346 140 QVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMND 219 (933)
Q Consensus 140 ~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~ 219 (933)
++||||+|.|+. +.++..-++.++.|++++|.|... ..+..+++|+.||||+|.++ .+-.+=.
T Consensus 287 telDLS~N~I~~---iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~----------- 349 (490)
T KOG1259|consen 287 TELDLSGNLITQ---IDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHL----------- 349 (490)
T ss_pred hhccccccchhh---hhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHh-----------
Confidence 999999998887 778888889999999999998766 44888999999999999988 4444322
Q ss_pred ccCCcccccccccCCccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccC-cccccCCCCCCEEEccCccCccCC
Q 002346 220 QQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVV-PASVISLPALLNISLQNNKLQGPY 298 (933)
Q Consensus 220 n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~ 298 (933)
.+-+++.|.|++|.+.. ...+..+-+|..||+++|+|.... -..++++|.|+.|.|.+|++.+.+
T Consensus 350 -------------KLGNIKtL~La~N~iE~-LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 350 -------------KLGNIKTLKLAQNKIET-LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred -------------hhcCEeeeehhhhhHhh-hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 26788999999998874 334667778889999999997532 357889999999999999988653
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.11 E-value=3.8e-11 Score=116.20 Aligned_cols=109 Identities=27% Similarity=0.356 Sum_probs=40.3
Q ss_pred ccCCcccceeecccccccccCCCcc-CcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccc-cCCc
Q 002346 86 ISSLTQLETLSFQMNNIAGAIPSLA-NATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNEL-TKST 163 (933)
Q Consensus 86 ~~~l~~L~~L~l~~N~l~~~~p~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~-~~l~ 163 (933)
+.+...+++|+|++|.|+.+ ..++ .+.+|+.|+|++|.|+.+.. +..+++|++|+|++|+++. +...+ ..++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I-e~L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~---i~~~l~~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI-ENLGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISS---ISEGLDKNLP 88 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S----CHHHHHH-T
T ss_pred cccccccccccccccccccc-cchhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCc---cccchHHhCC
Confidence 44555678888888888854 4455 57788888888888888763 7778888888888888887 44444 3678
Q ss_pred cCCeeeccCcccCCCC-ChhhcCCCCCCEEEccCCcCC
Q 002346 164 SLTTLYMDNANIFGLI-PDFFDSFSNLQNLRLSYNNFT 200 (933)
Q Consensus 164 ~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 200 (933)
+|++|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 8888888888886542 255677888999999999887
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=6e-10 Score=115.49 Aligned_cols=143 Identities=20% Similarity=0.287 Sum_probs=111.4
Q ss_pred CCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCC--CcceeEEeEeeeCc---eeEEEEee
Q 002346 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH--RHLVALLGYCINGS---ERLLVYEY 660 (933)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~ 660 (933)
.+.|+.|.++.||++...+|+.+++|........ ....++..|+++++.+++ ..+.+++.+..... ..++||||
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 3678999999999998866789999987654321 234578999999999975 44677787776542 56899999
Q ss_pred cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcc------------------------------------
Q 002346 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA------------------------------------ 704 (933)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 704 (933)
++|.++.+.+.. ..++..++..++.++++++++||+..
T Consensus 82 i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 82 VDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred eCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 999888776521 24677788888899999999998521
Q ss_pred -----------------CCCeEecCCCCCcEEecC--CCcEEEecccccc
Q 002346 705 -----------------QQSFIHRDLKPSNILIGD--DMRAKVADFGLVK 735 (933)
Q Consensus 705 -----------------~~~ivH~Dik~~Nill~~--~~~~kl~DfGla~ 735 (933)
...++|+|+.+.||+++. ++.+.|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 256799999999999998 6678999999765
No 476
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=8.8e-10 Score=103.52 Aligned_cols=145 Identities=21% Similarity=0.234 Sum_probs=107.9
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC------chhHHHHHHHHHHHHhcCCCcceeEEeEeeeCceeEEEE
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG------NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 658 (933)
....|-||+-+.|+++.+ .|+.+.||.-.....- .-..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 467899999999999998 6888888854333221 122456788999999987555554444555555667899
Q ss_pred eecCC-CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCC---cEEEeccccc
Q 002346 659 EYMPR-GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAKVADFGLV 734 (933)
Q Consensus 659 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~DfGla 734 (933)
||+++ .++.+++..... .+........++..|-+.+.-||. .+|||+|+..+||++..++ .+.++|||++
T Consensus 90 E~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred EeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecch
Confidence 99976 588888876332 222333337889999999999998 8999999999999997665 3689999997
Q ss_pred cc
Q 002346 735 KN 736 (933)
Q Consensus 735 ~~ 736 (933)
..
T Consensus 164 ~~ 165 (229)
T KOG3087|consen 164 SV 165 (229)
T ss_pred hc
Confidence 53
No 477
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.2e-11 Score=130.01 Aligned_cols=65 Identities=25% Similarity=0.239 Sum_probs=31.9
Q ss_pred CcCcCceeccccccccCCCC-CcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCeeeccCccc
Q 002346 111 NATSLQDIYLDNNNFTSVPT-GCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANI 175 (933)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l 175 (933)
++.+|+.+.|.+..+..++. .....|++++.||||.|-+....++-.-...|++|+.|+|+.|++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl 184 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRL 184 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccc
Confidence 45556666666655554332 233445555555555554444323333334444555555555444
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.5e-10 Score=128.25 Aligned_cols=248 Identities=18% Similarity=0.187 Sum_probs=174.7
Q ss_pred HHHhcCCccCCccccCCCeEEEEEEe--CCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeEeeeCce
Q 002346 577 RQVTDNFSEANILGRGGFGVVYGGEL--PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSE 653 (933)
Q Consensus 577 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 653 (933)
.....+|..+..||.|.|+.|++... .++..|++|.+............-..|+.+...+ .|.+++..+..+..-+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 34456888999999999999999843 4678899998877654433333335566666666 58899988877777777
Q ss_pred eEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCC-CcEEEeccc
Q 002346 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVADFG 732 (933)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~-~~~kl~DfG 732 (933)
.|+=-||++++++...+.- ...++...++++..|++.++.++|+ ..++|+|+||+||++..+ +..+++|||
T Consensus 341 ~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccc
Confidence 8899999999998877622 2457778899999999999999998 899999999999999886 788999999
Q ss_pred ccccCCCCCceeecccccccCcc--cccccCCCCCCCccchHhHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHhhcc
Q 002346 733 LVKNAPDGKYSVETRLAGTFGYL--APEYAATGRVTTKIDVYAFGVVLMETITGRKALDDTMPDDRAHLVTWFRRVLISK 810 (933)
Q Consensus 733 la~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 810 (933)
.+...... .....+.-++. +++......+-.+.|+||||..+.|.++|..--.... .|... ..
T Consensus 413 ~~t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~~i---~~ 477 (524)
T KOG0601|consen 413 CWTRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSLTI---RS 477 (524)
T ss_pred ccccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cceee---ec
Confidence 88642211 11112233444 4555555677889999999999999999874322211 01100 01
Q ss_pred CCCCcccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002346 811 ENIPKAIDPNLNLDEETIESIYRVAELAGHCTAREPQQRPDMGHAVNV 858 (933)
Q Consensus 811 ~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~~P~~RPs~~evl~~ 858 (933)
+.++ ... . .. ..+..+.+.+..+++..||.+.++...
T Consensus 478 ~~~p-----~~~---~--~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 478 GDTP-----NLP---G--LK-LQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred cccc-----CCC---c--hH-HhhhhhhhhhcCCccccchhhhhhccc
Confidence 1111 111 0 01 235567778889999999998877653
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=3e-11 Score=127.12 Aligned_cols=209 Identities=19% Similarity=0.144 Sum_probs=135.0
Q ss_pred cCCcccceeecccccccccCC--CccCcCcCceeccccccccCC--CCCcccCCCCCCEEEccCCCCCCCCCCCccccCC
Q 002346 87 SSLTQLETLSFQMNNIAGAIP--SLANATSLQDIYLDNNNFTSV--PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKS 162 (933)
Q Consensus 87 ~~l~~L~~L~l~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l 162 (933)
.++.+|++..|.+..+..... ....+++++.||||+|-|... .......|++|+.|+|+.|++...+. -..-..+
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~-s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFIS-SNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcc-ccchhhh
Confidence 468889999998887764432 467789999999999998853 23345679999999999999876321 1122467
Q ss_pred ccCCeeeccCcccCCC-CChhhcCCCCCCEEEccCCcCCCCCCccccc-cccchhhcccccCCcccccccccCCccCcEE
Q 002346 163 TSLTTLYMDNANIFGL-IPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQV 240 (933)
Q Consensus 163 ~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L 240 (933)
+.|+.|.|+.|.|+-. +-.....+|+|+.|+|..|..-+.-.....- ..|++|+|++|++...........++.|..|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 8899999999998733 2333456899999999999622121111111 3466666776666666665666666777777
Q ss_pred EecCCccCCCC-CC------CCCCCCCCEEEccCCccccc-CcccccCCCCCCEEEccCccCcc
Q 002346 241 WLHKNQFTGPI-PD------LSKCESLFDLSLRDNQLTGV-VPASVISLPALLNISLQNNKLQG 296 (933)
Q Consensus 241 ~L~~N~l~~~~-~~------~~~~~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~ 296 (933)
+++.+.+..+- |+ ...+++|++|+++.|++..- .-..+..+++|+.|.+..|.|+.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 77777665421 22 23456677777777766411 11234445566666666666653
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.03 E-value=5.7e-11 Score=134.76 Aligned_cols=175 Identities=29% Similarity=0.338 Sum_probs=116.4
Q ss_pred cCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCC
Q 002346 87 SSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLT 166 (933)
Q Consensus 87 ~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~ 166 (933)
..+..++.+++..|.|..+...+..+.+|..|++.+|+|..+... +..+++|++|+|++|.|... ..+..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i----~~l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKL----EGLSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhhhcchheeccccccccc----cchhhccchh
Confidence 456777788888888886555688888999999999999887654 67788999999999988872 4567777799
Q ss_pred eeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccccccccCCccCcEEEecCCc
Q 002346 167 TLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQ 246 (933)
Q Consensus 167 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~~L~~L~L~~N~ 246 (933)
.|++++|.|+.. ..+..++.|+.+++++|++. .+.... +..+.+|+.+++.+|.
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~-~ie~~~-----------------------~~~~~~l~~l~l~~n~ 197 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIV-DIENDE-----------------------LSELISLEELDLGGNS 197 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhh-hhhhhh-----------------------hhhccchHHHhccCCc
Confidence 999999988776 55666889999999999988 343310 0124556666666665
Q ss_pred cCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCC--CCEEEccCccCc
Q 002346 247 FTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPA--LLNISLQNNKLQ 295 (933)
Q Consensus 247 l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 295 (933)
+.. +..+..+..+..+++..|.++..-+ +..+.. |+.+++++|++.
T Consensus 198 i~~-i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~ 245 (414)
T KOG0531|consen 198 IRE-IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS 245 (414)
T ss_pred hhc-ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc
Confidence 552 2223333444444666666652211 111222 555555555554
No 481
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=1.6e-11 Score=125.76 Aligned_cols=39 Identities=26% Similarity=0.394 Sum_probs=24.1
Q ss_pred cccCCeEecccCcccC----CCCcccCCCCCcCEEeccCCcCc
Q 002346 390 LTSLKNLYLQQNNLTG----PIPDGLTKLASLQNLDVSNNNLS 428 (933)
Q Consensus 390 l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~ 428 (933)
.++|+.|.|.+|.++. .+-..+...+.|..|+|++|.|.
T Consensus 269 ~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 269 APSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred CCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 4566666666666653 23334455677777777777774
No 482
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.00 E-value=3e-11 Score=123.88 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=66.3
Q ss_pred cCCccCCeeeccCcccCCCCCh----hhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcccccccccCCc
Q 002346 160 TKSTSLTTLYMDNANIFGLIPD----FFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMT 235 (933)
Q Consensus 160 ~~l~~L~~L~L~~n~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~~~~~~l~~l~ 235 (933)
..+++|++|+||.|-|.-.-+. .+.++..|++|.|.+|.+. ......-...|.+|..+ .....-+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~----------kk~~~~~ 157 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVN----------KKAASKP 157 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHH----------hccCCCc
Confidence 3344555555555554332222 2345566666666666664 22111111112222200 1122346
Q ss_pred cCcEEEecCCccCCCCC-----CCCCCCCCCEEEccCCccccc----CcccccCCCCCCEEEccCccCc
Q 002346 236 QLRQVWLHKNQFTGPIP-----DLSKCESLFDLSLRDNQLTGV----VPASVISLPALLNISLQNNKLQ 295 (933)
Q Consensus 236 ~L~~L~L~~N~l~~~~~-----~~~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 295 (933)
.|+++..++|++..... .|...+.|+.+.++.|.|... +...|..+++|+.|||.+|-|+
T Consensus 158 ~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 158 KLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred ceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhh
Confidence 77888888887765433 155567777777777776521 2345566777777777777776
No 483
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.97 E-value=3.7e-08 Score=103.69 Aligned_cols=273 Identities=15% Similarity=0.161 Sum_probs=167.4
Q ss_pred cCCccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhc-CCCcceeEEeE------eee-CceeEE
Q 002346 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGY------CIN-GSERLL 656 (933)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~------~~~-~~~~~l 656 (933)
..+.||+|+.+.+|-.- .-...+.|+........ -...+..|... .||-+-.-+.| .-+ +....+
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~-----~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAA-----QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchH-----HHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 45779999999999642 11223557666543211 12223444444 46644331221 111 223567
Q ss_pred EEeecCCC-ChhhHhh-hcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 002346 657 VYEYMPRG-TLAQHLF-EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (933)
Q Consensus 657 v~e~~~~g-sL~~~l~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla 734 (933)
.|+.+.+. -...++. +.++......+|...+++++.+|.+.+.||. .|.+-+|+.++|+|+.+++.+.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccce
Confidence 88877663 2222222 1234455678999999999999999999999 89999999999999999999999986543
Q ss_pred ccCCCCCceeecccccccCcccccccC-----CCCCCCccchHhHHHHHHHHHcC-CCCCCCCCC-----c-hhhHHHH-
Q 002346 735 KNAPDGKYSVETRLAGTFGYLAPEYAA-----TGRVTTKIDVYAFGVVLMETITG-RKALDDTMP-----D-DRAHLVT- 801 (933)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~~l~elltG-~~p~~~~~~-----~-~~~~~~~- 801 (933)
....++ ...-..+|.+.|.+||.-. +-.-+...|.|.+|+++++++.| ++||.+-.. . .+.++..
T Consensus 165 qi~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 165 QINANG--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeccCC--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 333222 2233457999999999664 23456789999999999999987 899975321 1 1111110
Q ss_pred -HHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHcccC--CCCCCCCHHHHHHHHhhhhhhcCCCCcCCCC
Q 002346 802 -WFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHCTAR--EPQQRPDMGHAVNVLGPLVEQWKPATREDED 875 (933)
Q Consensus 802 -~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~cl~~--~P~~RPs~~evl~~L~~~~~~~~~~~~~~~~ 875 (933)
+........+..+......+ .-....+..+..+|+.. .+.-||+++..+..|..+.+++.++.....+
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~------~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H 313 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPL------SMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMH 313 (637)
T ss_pred eeeechhccCCCCCCCCCCCh------hhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcccc
Confidence 00000000111111000000 01112344566677764 3678999999999999988888776665444
No 484
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.92 E-value=1.3e-10 Score=131.86 Aligned_cols=214 Identities=21% Similarity=0.243 Sum_probs=151.9
Q ss_pred CEEEEEecCCCCccccCccccCCcccceeecccccccccCCCccCcCcCceeccccccccCCCCCcccCCCCCCEEEccC
Q 002346 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (933)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 146 (933)
.+..++++.|.+. .+-..+..+++|+.|++.+|+|..+...+..+.+|++|+|++|.|+.+.. +..++.|+.|++++
T Consensus 73 ~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 73 SLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSG 149 (414)
T ss_pred hHHhhccchhhhh-hhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhccchhhheecc
Confidence 3455567777776 34455888999999999999999766668889999999999999998875 67788899999999
Q ss_pred CCCCCCCCCCccccCCccCCeeeccCcccCCCCC-hhhcCCCCCCEEEccCCcCCCCCCccccccccchhhcccccCCcc
Q 002346 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP-DFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (933)
Q Consensus 147 N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~l~l~~n~~~~~ 225 (933)
|.|.. ...+..+++|+.+++++|.+...-+ . ...+.+|+.+++.+|.+. .+...
T Consensus 150 N~i~~----~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-~i~~~------------------- 204 (414)
T KOG0531|consen 150 NLISD----ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-EIEGL------------------- 204 (414)
T ss_pred Ccchh----ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh-cccch-------------------
Confidence 99988 2456669999999999999987755 3 578899999999999997 33211
Q ss_pred cccccccCCccCcEEEecCCccCCCCCCCCCCC--CCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCC-CCC
Q 002346 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCE--SLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP-LFP 302 (933)
Q Consensus 226 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~ 302 (933)
..+..+..+++..|.++..-+ +..+. .|+.+++++|.+. .++..+..+.++..|++.+|++...-. ...
T Consensus 205 ------~~~~~l~~~~l~~n~i~~~~~-l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~~~ 276 (414)
T KOG0531|consen 205 ------DLLKKLVLLSLLDNKISKLEG-LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLERL 276 (414)
T ss_pred ------HHHHHHHHhhcccccceeccC-cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccccccc
Confidence 113344444666666653222 22222 3677777777776 444556666777777777777765322 223
Q ss_pred CCccEEeccCCcCC
Q 002346 303 SKVQKVSLDHNNFC 316 (933)
Q Consensus 303 ~~l~~L~l~~n~~~ 316 (933)
..+..+.+..|.+.
T Consensus 277 ~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 277 PKLSELWLNDNKLA 290 (414)
T ss_pred chHHHhccCcchhc
Confidence 34455555555554
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.87 E-value=2.2e-08 Score=98.83 Aligned_cols=128 Identities=22% Similarity=0.306 Sum_probs=84.2
Q ss_pred EEEEEEeCCCcEEEEEEeccccCC------------------------chhHHHHHHHHHHHHhcCCC--cceeEEeEee
Q 002346 596 VVYGGELPDGTKIAVKRMESNTMG------------------------NKGLSEFQAEIAVLTKVRHR--HLVALLGYCI 649 (933)
Q Consensus 596 ~Vy~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 649 (933)
.||.|...+|..+|||..+....+ .......++|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489998889999999977553210 01134567899999999755 566776553
Q ss_pred eCceeEEEEeecC--CCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHH-hhhccCCCeEecCCCCCcEEecCCCcE
Q 002346 650 NGSERLLVYEYMP--RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY-LHSLAQQSFIHRDLKPSNILIGDDMRA 726 (933)
Q Consensus 650 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dik~~Nill~~~~~~ 726 (933)
...+||||++ |..+.... . ..++......++.++++.+.. +|. .||+|+|+.+.||+++++ .+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~-~------~~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLK-D------VDLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHH-H------CGGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CE
T ss_pred ---CCEEEEEecCCCccchhhHH-h------ccccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eE
Confidence 3479999998 54554433 2 111134456678888886666 466 899999999999999888 99
Q ss_pred EEecccccccCC
Q 002346 727 KVADFGLVKNAP 738 (933)
Q Consensus 727 kl~DfGla~~~~ 738 (933)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999877554
No 486
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=3.4e-08 Score=103.68 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=101.8
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCc---------hhHHHHHHHHHHHHhcCCCc--ceeEEeEeee-----
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGN---------KGLSEFQAEIAVLTKVRHRH--LVALLGYCIN----- 650 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 650 (933)
+.+-.-....|+++.+ +|+.|.||+........ .....+.+|...+.++...+ .++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444556777776 67899999774432110 01124789999988885333 3445555543
Q ss_pred CceeEEEEeecCCC-ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecC-------
Q 002346 651 GSERLLVYEYMPRG-TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD------- 722 (933)
Q Consensus 651 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~------- 722 (933)
....++|||++++. +|.+++.... ..+.+...+..++.++++.++.||+ .||+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCC
Confidence 23568999999885 8998885421 1345567788999999999999999 99999999999999975
Q ss_pred CCcEEEecccccc
Q 002346 723 DMRAKVADFGLVK 735 (933)
Q Consensus 723 ~~~~kl~DfGla~ 735 (933)
+..+.++||+.+.
T Consensus 181 ~~~~~LIDl~r~~ 193 (268)
T PRK15123 181 DLKLSVIDLHRAQ 193 (268)
T ss_pred CceEEEEECCccc
Confidence 4689999999775
No 487
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.79 E-value=1.2e-07 Score=102.64 Aligned_cols=169 Identities=18% Similarity=0.259 Sum_probs=126.8
Q ss_pred eEEEEE-EeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCcceeEEeEee----eCceeEEEEeecCC-CChhh
Q 002346 595 GVVYGG-ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI----NGSERLLVYEYMPR-GTLAQ 668 (933)
Q Consensus 595 g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gsL~~ 668 (933)
.+.||+ ...||..|++|+++...... ...-..-+++++++.|.|||++.+++. .+...++||+|.++ ++|.+
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 578998 34589999999995432211 112234578899999999999998876 34567899999876 67877
Q ss_pred Hhhhccc----------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 669 HLFEWHD----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 669 ~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
.-+.... ......+++..|.++.|+..||.++|+ .|+.-+-+.+++|+++.+.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 6544221 122357889999999999999999999 899999999999999999999999888765444
Q ss_pred CCCceeecccccccCcccccccCCCCCCCccchHhHHHHHHHHHcCCC
Q 002346 739 DGKYSVETRLAGTFGYLAPEYAATGRVTTKIDVYAFGVVLMETITGRK 786 (933)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~~l~elltG~~ 786 (933)
.+.. |-+ .-..+-|.=.||.+++.|.||..
T Consensus 445 ~d~~---------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT---------------EPL---ESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC---------------cch---hHHhhhhHHHHHHHHHHHhhccc
Confidence 3220 111 11235688899999999999964
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=3.9e-09 Score=83.96 Aligned_cols=60 Identities=38% Similarity=0.597 Sum_probs=44.0
Q ss_pred cccceeecccccccccCC-CccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCC
Q 002346 90 TQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPN 149 (933)
Q Consensus 90 ~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~ 149 (933)
++|++|++++|+|+.+++ .|.++++|++|++++|.|+.+++.+|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 457777777777776666 677777777777777777777777777777777777777753
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=5.1e-09 Score=83.29 Aligned_cols=61 Identities=38% Similarity=0.562 Sum_probs=57.2
Q ss_pred CceeEEEccCccccCcCchhhcCcccCCeEecccCcccCCCCcccCCCCCcCEEeccCCcC
Q 002346 367 GRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427 (933)
Q Consensus 367 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~l~ls~N~l 427 (933)
++|+.|+|++|+++...+..|.++++|++|+|++|+++...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4799999999999987778999999999999999999988889999999999999999986
No 490
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.76 E-value=4.8e-09 Score=126.83 Aligned_cols=298 Identities=20% Similarity=0.204 Sum_probs=151.3
Q ss_pred CCcccceeecccccccccCCCccCcCcCceecccccc--ccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccC
Q 002346 88 SLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNN--FTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165 (933)
Q Consensus 88 ~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~Ls~N~--l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L 165 (933)
+....+...+.+|.+..+.-+. ..++|++|-+..|. +..++...|..++.|++|||++|.-.+ .+|..++.|-+|
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~--~LP~~I~~Li~L 597 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLS--KLPSSIGELVHL 597 (889)
T ss_pred chhheeEEEEeccchhhccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccC--cCChHHhhhhhh
Confidence 3456677777777665433322 23367777777775 667777777778888888888765444 577788888888
Q ss_pred CeeeccCcccCCCCChhhcCCCCCCEEEccCCcCCCCCCcccc-ccccchhhcccccCC-cccccccccCCccCcEEEec
Q 002346 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFA-KSDIQNLWMNDQQLG-LSGTLDVLSGMTQLRQVWLH 243 (933)
Q Consensus 166 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~~~l~~l~l~~n~~~-~~~~~~~l~~l~~L~~L~L~ 243 (933)
++|+|+...+. .+|..+++|..|.+|++..+.-...+|.... -.+|++|.+...... .......+..+.+|+.|...
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 88888877776 4477788888888888877765545544443 234444443332210 11111223334444444443
Q ss_pred CCccCCCCCCCCCCCCCC----EEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccEEeccCCcCCCCC
Q 002346 244 KNQFTGPIPDLSKCESLF----DLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNS 319 (933)
Q Consensus 244 ~N~l~~~~~~~~~~~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n~~~~~~ 319 (933)
.... .....+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++......-........++ .
T Consensus 677 ~~s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~----~----- 745 (889)
T KOG4658|consen 677 ISSV-LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLL----C----- 745 (889)
T ss_pred cchh-HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhh----h-----
Confidence 3322 1111122222211 2222222222 3445556666666666666665532221111111110 0
Q ss_pred CCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccCCeEecc
Q 002346 320 SDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399 (933)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 399 (933)
...+.... ..+...-..+.+.-..++|+.|.+..+.....+.+....+..++.+-+.
T Consensus 746 ----------f~~l~~~~-------------~~~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~ 802 (889)
T KOG4658|consen 746 ----------FPNLSKVS-------------ILNCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILP 802 (889)
T ss_pred ----------HHHHHHHH-------------hhccccccccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEec
Confidence 00000000 0000001112222334677777777776666666666666666666666
Q ss_pred cCcccCC-CCcccCCCCCcCEEecc
Q 002346 400 QNNLTGP-IPDGLTKLASLQNLDVS 423 (933)
Q Consensus 400 ~N~l~g~-~p~~~~~l~~L~~l~ls 423 (933)
.+.+.+. .-...+.++++..+.++
T Consensus 803 f~~~~~l~~~~~l~~l~~i~~~~l~ 827 (889)
T KOG4658|consen 803 FNKLEGLRMLCSLGGLPQLYWLPLS 827 (889)
T ss_pred ccccccceeeecCCCCceeEecccC
Confidence 6666654 23344444444444443
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.72 E-value=8.5e-08 Score=96.63 Aligned_cols=137 Identities=20% Similarity=0.201 Sum_probs=98.0
Q ss_pred CccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC--------------------chhHHHHHHHHHHHHhcCCC--c
Q 002346 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG--------------------NKGLSEFQAEIAVLTKVRHR--H 640 (933)
Q Consensus 583 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~h~--n 640 (933)
..+++.||.|--+.||.|..+.|.++|||.-+....+ .......++|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4567899999999999999999999999954332111 11234567899999999644 7
Q ss_pred ceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEe
Q 002346 641 LVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (933)
Q Consensus 641 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill 720 (933)
|.+.+++ +...+||||++|-.|...- ++.+....|+..|++-+..+-. .||||+|+.+-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 7777775 3457999999886664332 1222333344444444444434 799999999999999
Q ss_pred cCCCcEEEeccccccc
Q 002346 721 GDDMRAKVADFGLVKN 736 (933)
Q Consensus 721 ~~~~~~kl~DfGla~~ 736 (933)
+++|.+.++||--+..
T Consensus 236 ~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 236 TEDGDIVVIDWPQAVP 251 (304)
T ss_pred ecCCCEEEEeCccccc
Confidence 9999999999975543
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.61 E-value=8.7e-07 Score=87.73 Aligned_cols=140 Identities=21% Similarity=0.181 Sum_probs=103.3
Q ss_pred cccCCCeEEEEEEeCCCcEEEEEEecccc-CC---chhHHHHHHHHHHHHhcCC--CcceeEEeEeee--C--ceeEEEE
Q 002346 589 LGRGGFGVVYGGELPDGTKIAVKRMESNT-MG---NKGLSEFQAEIAVLTKVRH--RHLVALLGYCIN--G--SERLLVY 658 (933)
Q Consensus 589 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~---~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~--~--~~~~lv~ 658 (933)
-|+||.+-|++... +|..+-+|+-.... .+ +-....|.+|+..+.++.. -.+.+++.+... + -.-+||+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 37799999999887 45578888765211 01 3356789999999999953 235555522211 1 2357999
Q ss_pred eecCC-CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCc--EEEecccccc
Q 002346 659 EYMPR-GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR--AKVADFGLVK 735 (933)
Q Consensus 659 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~--~kl~DfGla~ 735 (933)
|-+++ .+|.+++.+. ...+.+...+..++.+++++++-||+ .++.|+|+.+.||+++.++. ++++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~---~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQH---AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcC---CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97754 6898888541 22356778888999999999999999 99999999999999986666 9999998665
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.56 E-value=6e-08 Score=117.48 Aligned_cols=104 Identities=24% Similarity=0.266 Sum_probs=53.8
Q ss_pred ccceeeccccc--ccccCC-CccCcCcCceeccccccccCCCCCcccCCCCCCEEEccCCCCCCCCCCCccccCCccCCe
Q 002346 91 QLETLSFQMNN--IAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTT 167 (933)
Q Consensus 91 ~L~~L~l~~N~--l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~p~~~~~l~~L~~ 167 (933)
.|++|-+..|. +..+.. .|..++.|++|||++|.=-+-.|..+++|-+|++|+|++..+.. +|..+.+|+.|.+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~---LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISH---LPSGLGNLKKLIY 622 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccc---cchHHHHHHhhhe
Confidence 45555555554 222222 24555556666665543222222335555556666666555554 5556666666666
Q ss_pred eeccCcccCCCCChhhcCCCCCCEEEccCC
Q 002346 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197 (933)
Q Consensus 168 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 197 (933)
|++..+.-...+|..+..|++|++|.|..-
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred eccccccccccccchhhhcccccEEEeecc
Confidence 666555544444555555566665555443
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.51 E-value=2.1e-08 Score=100.62 Aligned_cols=183 Identities=19% Similarity=0.190 Sum_probs=81.0
Q ss_pred CEEEEEecCCCCcc--ccCccccCCcccceeecccccccccCCCc-cCcCcCceeccccccccC-CCCCcccCCCCCCEE
Q 002346 67 RVTTISLAKSGLSG--TLSPEISSLTQLETLSFQMNNIAGAIPSL-ANATSLQDIYLDNNNFTS-VPTGCFDGLTNLQVL 142 (933)
Q Consensus 67 ~v~~L~l~~~~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 142 (933)
+|..+||.+|.|+. .+..-+.+++.|+.|+|+.|++...|.++ ..+.+|++|-|.+..+.- -....+..++.+++|
T Consensus 72 ~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtel 151 (418)
T KOG2982|consen 72 DVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTEL 151 (418)
T ss_pred hhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhh
Confidence 45555665555542 22223445666666666666665544443 345556666665555541 122234445555555
Q ss_pred EccCCCCCCCCCCCcccc-CCccCCeeeccCcccCCC--CChhhcCCCCCCEEEccCCcCCCCCCccc--cccccchhhc
Q 002346 143 SLSDNPNLAPWPFPNELT-KSTSLTTLYMDNANIFGL--IPDFFDSFSNLQNLRLSYNNFTGSLPASF--AKSDIQNLWM 217 (933)
Q Consensus 143 ~Ls~N~~~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~~~l~~l~l 217 (933)
.+|.|.+.....-..... .-+.++.|++..|....- +...-.-++++..+.+..|.+...-...= ..+.+..|.|
T Consensus 152 HmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL 231 (418)
T KOG2982|consen 152 HMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNL 231 (418)
T ss_pred hhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhh
Confidence 555553211000000000 011222222222211000 00001124556666666665552211110 0123345566
Q ss_pred ccccCCcccccccccCCccCcEEEecCCccCC
Q 002346 218 NDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG 249 (933)
Q Consensus 218 ~~n~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 249 (933)
..+++......+++.+++.|..|.+++|.|..
T Consensus 232 ~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 232 GANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 66666666666666666666666666666554
No 495
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.50 E-value=1.1e-06 Score=89.30 Aligned_cols=107 Identities=27% Similarity=0.342 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhcCCC--cceeEEeEeeeC----ceeEEEEeecCC-CChhhHhhhcccCCCCCCCHHHHHHHHHHHHH
Q 002346 623 LSEFQAEIAVLTKVRHR--HLVALLGYCING----SERLLVYEYMPR-GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR 695 (933)
Q Consensus 623 ~~~~~~E~~~l~~l~h~--niv~l~~~~~~~----~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~ 695 (933)
..+..+|...+..+... .+.+.+++.... ...++|+|++++ .+|.+++.... ..+......++.++++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHH
Confidence 35678888888888533 345666666542 245899999987 48999886521 2556678899999999
Q ss_pred HHHHhhhccCCCeEecCCCCCcEEecCCC---cEEEecccccccC
Q 002346 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAKVADFGLVKNA 737 (933)
Q Consensus 696 ~l~~LH~~~~~~ivH~Dik~~Nill~~~~---~~kl~DfGla~~~ 737 (933)
.++-||+ .||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 130 ~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 130 LIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 9999999999999999887 8999999976643
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=3.7e-09 Score=117.67 Aligned_cols=131 Identities=27% Similarity=0.212 Sum_probs=89.1
Q ss_pred CccCcEEEecCCccCCCCCCCCCCCCCCEEEccCCcccccCcccccCCCCCCEEEccCccCccCCCCCCCCccEEeccCC
Q 002346 234 MTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHN 313 (933)
Q Consensus 234 l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~l~~n 313 (933)
.-.|...+.+.|.|.-.-.++.-++.|+.|+|++|+++.. +.+..+++|++|||++|.|+-..-..+.
T Consensus 163 Wn~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~---------- 230 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMV---------- 230 (1096)
T ss_pred hhhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchh----------
Confidence 3467888888888887666777788888999999998844 3788888899999999888743211110
Q ss_pred cCCCCCCCCCCCCCchhhhhHhhhcccCCCccccCCCCCCCCCCCCCccccCCCceeEEEccCccccCcCchhhcCcccC
Q 002346 314 NFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSL 393 (933)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 393 (933)
--+|+.|+|.+|.++. -..+.+|++|
T Consensus 231 ----------------------------------------------------gc~L~~L~lrnN~l~t--L~gie~LksL 256 (1096)
T KOG1859|consen 231 ----------------------------------------------------GCKLQLLNLRNNALTT--LRGIENLKSL 256 (1096)
T ss_pred ----------------------------------------------------hhhheeeeecccHHHh--hhhHHhhhhh
Confidence 0135666666666552 2346777777
Q ss_pred CeEecccCcccCCC-CcccCCCCCcCEEeccCCcCccc
Q 002346 394 KNLYLQQNNLTGPI-PDGLTKLASLQNLDVSNNNLSGK 430 (933)
Q Consensus 394 ~~L~L~~N~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~ 430 (933)
+-|||+.|-|.+.- -..++.|..|..|+|.+|+|...
T Consensus 257 ~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 257 YGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 77788877776532 12355566777888888877643
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.46 E-value=6.3e-07 Score=101.84 Aligned_cols=149 Identities=21% Similarity=0.288 Sum_probs=97.6
Q ss_pred hcCCccCCccccCCCeEEEEEEeCCCcEEEEEEeccccCC---------------------------c-hhH--------
Q 002346 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG---------------------------N-KGL-------- 623 (933)
Q Consensus 580 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~-~~~-------- 623 (933)
...|. .+.|+.++-|.||+|++++|+.||||+.++.... . ...
T Consensus 125 F~eF~-~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFE-PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcC-CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 34444 3789999999999999999999999988664210 0 001
Q ss_pred --HHHHHHHHHHHhcC-----CCcceeEEeEeeeCceeEEEEeecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 002346 624 --SEFQAEIAVLTKVR-----HRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARG 696 (933)
Q Consensus 624 --~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~ 696 (933)
-++.+|...+.+++ .+.|.-..=|........++|||++|..+.+...-. ..+ ++ +..++..++++
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-~~g---~d---~k~ia~~~~~~ 276 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-SAG---ID---RKELAELLVRA 276 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-hcC---CC---HHHHHHHHHHH
Confidence 12455666666652 233322222222345678999999999998874321 122 33 33344444443
Q ss_pred H-HHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCC
Q 002346 697 V-EYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (933)
Q Consensus 697 l-~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~ 739 (933)
. ..+= ..|+.|.|..|.||+++.+|.+.+.|||+.....+
T Consensus 277 f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 FLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2 1121 26999999999999999999999999999876654
No 498
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=9.5e-08 Score=107.61 Aligned_cols=150 Identities=21% Similarity=0.283 Sum_probs=100.2
Q ss_pred HHHHHHHHHhhhccCCCeEecCCCCCcEEecCCCcEEEecccccccCCCCC------ceee--cccccccCcccccccCC
Q 002346 691 LDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK------YSVE--TRLAGTFGYLAPEYAAT 762 (933)
Q Consensus 691 ~~i~~~l~~LH~~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~~~~------~~~~--~~~~gt~~y~aPE~~~~ 762 (933)
.+++.|+.|+|. +.++||++|.|++|.++.++..||+.|+.+....... +... .-..-...|.|||++..
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 345589999998 5899999999999999999999999999866443311 1110 11224467999999999
Q ss_pred CCCCCccchHhHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHHHhhccCCCCcccCCCCCCChhhHHHHHHHHHHHHHc
Q 002346 763 GRVTTKIDVYAFGVVLMETIT-GRKALDDTMPDDRAHLVTWFRRVLISKENIPKAIDPNLNLDEETIESIYRVAELAGHC 841 (933)
Q Consensus 763 ~~~~~~~Dv~SlG~~l~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~li~~c 841 (933)
...+.++|+||+|+++|.+.. |+.-+........... ... ..+... .....+...++.+-+.++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~----~~~---~~~~~~--------~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF----SRN---LLNAGA--------FGYSNNLPSELRESLKKL 248 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhh----hhc---cccccc--------ccccccCcHHHHHHHHHH
Confidence 888999999999999999994 4444433211111000 000 000000 001122235677888889
Q ss_pred ccCCCCCCCCHHHHHH
Q 002346 842 TAREPQQRPDMGHAVN 857 (933)
Q Consensus 842 l~~~P~~RPs~~evl~ 857 (933)
+..++..||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999998777654
No 499
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.36 E-value=6.6e-06 Score=82.47 Aligned_cols=155 Identities=23% Similarity=0.279 Sum_probs=104.9
Q ss_pred ecHHHHHHHhcCCccCCcccc---CCCeEEEEEEeCCCcEEEEEEeccccCCch----------------------hHHH
Q 002346 571 ISIEVLRQVTDNFSEANILGR---GGFGVVYGGELPDGTKIAVKRMESNTMGNK----------------------GLSE 625 (933)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~lg~---G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------~~~~ 625 (933)
.+.+.+..+.++..+....|. |--+.||+|...++..||||+++.....-+ ....
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 456777777777777666554 555699999887899999998865432110 0122
Q ss_pred HHHHHHHHHhcC--CCcceeEEeEeeeCceeEEEEeecCCCCh-hhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 002346 626 FQAEIAVLTKVR--HRHLVALLGYCINGSERLLVYEYMPRGTL-AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHS 702 (933)
Q Consensus 626 ~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~ 702 (933)
...|+.-|.++. +-.+.+.+++. +-.|||||+..... .-.|.+ .++...+...+..++++.+.-|-.
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD------v~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD------VPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc------CCcCchhHHHHHHHHHHHHHHHHH
Confidence 356777777773 45566666654 33799999965311 112211 223333566777777777776654
Q ss_pred ccCCCeEecCCCCCcEEecCCCcEEEecccccccCC
Q 002346 703 LAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (933)
Q Consensus 703 ~~~~~ivH~Dik~~Nill~~~~~~kl~DfGla~~~~ 738 (933)
..++||+|+..-|||+. ++.+.|+|||-|....
T Consensus 185 --~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 --EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 37999999999999999 8899999999876544
No 500
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.32 E-value=7.2e-06 Score=84.46 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=85.8
Q ss_pred CccccCCCeEEEEEEeCCCcEEEEEEeccccCCchhHHHHHHHHHHHHhcCCCc--ceeEEeEeeeCceeEEEEeecCCC
Q 002346 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH--LVALLGYCINGSERLLVYEYMPRG 664 (933)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g 664 (933)
..||+|..+.||+. .+..+++|..+... ...+..+|.++++.+..-. +.+.+++....+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 57899999999984 25568889876432 2345688999999986433 567788887777788999999886
Q ss_pred C-hhhHh------------------hhcccCCCCCCCHHHHHH-HHH----------HHHH-HHHHhhhc-cCCCeEecC
Q 002346 665 T-LAQHL------------------FEWHDHGYTPLTWKQRVT-IAL----------DVAR-GVEYLHSL-AQQSFIHRD 712 (933)
Q Consensus 665 s-L~~~l------------------~~~~~~~~~~l~~~~~~~-i~~----------~i~~-~l~~LH~~-~~~~ivH~D 712 (933)
+ +...+ .+.+.............. +-. .+.+ ...+|... ....++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 3 21111 111111000111111100 000 0001 11222211 134678999
Q ss_pred CCCCcEEecCCCcEEEecccccc
Q 002346 713 LKPSNILIGDDMRAKVADFGLVK 735 (933)
Q Consensus 713 ik~~Nill~~~~~~kl~DfGla~ 735 (933)
+.|.||++++++ +.|+||+.+.
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcC
Confidence 999999999888 9999999764
Done!