Query 002354
Match_columns 932
No_of_seqs 562 out of 3399
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 22:55:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002354.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002354hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j09_A COPA, copper-exporting 100.0 2E-123 5E-128 1138.2 55.7 712 127-903 3-716 (723)
2 3rfu_A Copper efflux ATPase; a 100.0 3E-120 1E-124 1101.8 65.2 647 223-901 77-734 (736)
3 3j08_A COPA, copper-exporting 100.0 2E-112 7E-117 1026.4 43.3 632 226-903 5-638 (645)
4 1mhs_A Proton pump, plasma mem 100.0 7.2E-86 2.5E-90 814.0 46.6 503 329-859 144-702 (920)
5 2zxe_A Na, K-ATPase alpha subu 100.0 8.6E-83 2.9E-87 805.4 60.8 582 324-925 133-853 (1028)
6 3ixz_A Potassium-transporting 100.0 3.9E-81 1.3E-85 791.6 61.9 582 325-926 139-859 (1034)
7 3ar4_A Sarcoplasmic/endoplasmi 100.0 1E-80 3.5E-85 786.7 60.0 586 323-925 87-833 (995)
8 3b8c_A ATPase 2, plasma membra 100.0 1.8E-85 6.2E-90 811.3 5.3 508 324-858 92-655 (885)
9 2yj3_A Copper-transporting ATP 100.0 6E-40 2.1E-44 354.6 0.0 260 546-848 4-263 (263)
10 3skx_A Copper-exporting P-type 100.0 6.2E-32 2.1E-36 292.7 28.4 276 558-854 1-276 (280)
11 3a1c_A Probable copper-exporti 100.0 8.1E-32 2.8E-36 294.7 28.4 277 547-846 9-287 (287)
12 2hc8_A PACS, cation-transporti 99.9 2.8E-27 9.7E-32 219.7 12.0 111 353-467 2-112 (113)
13 2kij_A Copper-transporting ATP 99.9 6.9E-27 2.4E-31 221.0 9.4 120 347-467 2-124 (124)
14 4fe3_A Cytosolic 5'-nucleotida 99.8 7.3E-22 2.5E-26 216.8 6.0 120 717-836 139-293 (297)
15 3mn1_A Probable YRBI family ph 99.6 4.7E-16 1.6E-20 158.8 9.2 139 709-857 42-188 (189)
16 1svj_A Potassium-transporting 99.6 6.3E-15 2.2E-19 144.4 13.5 131 577-722 13-156 (156)
17 2kmv_A Copper-transporting ATP 99.6 4.4E-14 1.5E-18 142.7 17.4 130 579-719 1-185 (185)
18 3n28_A Phosphoserine phosphata 99.4 9.2E-14 3.2E-18 154.8 8.3 135 719-856 178-333 (335)
19 2arf_A Wilson disease ATPase; 99.4 1.3E-12 4.3E-17 130.0 14.9 127 581-718 1-165 (165)
20 1k1e_A Deoxy-D-mannose-octulos 99.4 7.5E-13 2.6E-17 133.7 11.8 153 699-855 8-175 (180)
21 3n1u_A Hydrolase, HAD superfam 99.3 2E-12 6.7E-17 132.1 7.5 153 697-851 17-182 (191)
22 3n07_A 3-deoxy-D-manno-octulos 99.3 1.5E-12 5.1E-17 133.4 6.3 131 697-831 23-164 (195)
23 3dxs_X Copper-transporting ATP 99.3 6.3E-12 2.2E-16 107.1 8.0 70 126-203 2-71 (74)
24 3ewi_A N-acylneuraminate cytid 99.3 3.7E-12 1.3E-16 127.1 7.1 115 709-836 32-153 (168)
25 1l6r_A Hypothetical protein TA 99.3 6.9E-12 2.4E-16 131.7 9.3 134 700-836 6-222 (227)
26 3mmz_A Putative HAD family hyd 99.3 1E-11 3.5E-16 125.0 9.4 103 727-834 47-153 (176)
27 3ij5_A 3-deoxy-D-manno-octulos 99.2 1.7E-11 5.9E-16 127.0 10.9 106 727-836 84-194 (211)
28 4a4j_A Pacszia, cation-transpo 99.2 3.2E-11 1.1E-15 101.0 8.8 67 126-201 2-68 (69)
29 3fry_A Probable copper-exporti 99.1 6.2E-11 2.1E-15 100.8 7.4 67 125-204 4-70 (73)
30 3iwl_A Copper transport protei 99.1 1.2E-10 4.1E-15 97.6 7.6 65 126-203 2-66 (68)
31 1osd_A MERP, hypothetical prot 99.1 2.9E-10 1E-14 95.3 8.8 68 126-201 3-70 (72)
32 3e8m_A Acylneuraminate cytidyl 99.1 4.2E-10 1.4E-14 111.3 11.3 106 727-836 39-149 (164)
33 2l3m_A Copper-ION-binding prot 99.1 4.1E-10 1.4E-14 94.2 9.0 67 125-199 4-70 (71)
34 1kvi_A Copper-transporting ATP 99.1 3.7E-10 1.3E-14 96.9 8.5 70 125-202 7-76 (79)
35 2g9o_A Copper-transporting ATP 99.0 4.8E-10 1.7E-14 99.5 9.3 72 126-205 3-77 (90)
36 3cjk_B Copper-transporting ATP 99.0 4.6E-10 1.6E-14 95.2 8.8 68 127-202 3-70 (75)
37 4dw8_A Haloacid dehalogenase-l 99.0 3.8E-10 1.3E-14 121.6 10.2 136 699-837 5-267 (279)
38 1y3j_A Copper-transporting ATP 99.0 2.7E-10 9.1E-15 97.4 7.0 71 125-203 2-72 (77)
39 1q8l_A Copper-transporting ATP 99.0 5.3E-10 1.8E-14 97.6 8.8 71 126-204 9-79 (84)
40 3pgv_A Haloacid dehalogenase-l 99.0 4.1E-10 1.4E-14 122.1 9.8 138 696-836 18-280 (285)
41 3dnp_A Stress response protein 99.0 7.5E-10 2.6E-14 120.0 11.8 136 699-837 6-272 (290)
42 1aw0_A Menkes copper-transport 99.0 4.3E-10 1.5E-14 94.3 7.6 67 127-201 4-70 (72)
43 1cpz_A Protein (COPZ); copper 99.0 6.9E-10 2.4E-14 91.8 8.3 65 128-200 2-66 (68)
44 2xmw_A PACS-N, cation-transpor 99.0 6.8E-10 2.3E-14 92.7 8.3 67 126-201 3-69 (71)
45 2qif_A Copper chaperone COPZ; 99.0 1E-09 3.5E-14 90.5 9.2 65 127-199 3-67 (69)
46 2kt2_A Mercuric reductase; nme 99.0 6.2E-10 2.1E-14 92.6 7.7 64 129-201 3-66 (69)
47 1mwy_A ZNTA; open-faced beta-s 99.0 9.6E-10 3.3E-14 92.8 8.9 67 125-201 2-68 (73)
48 3dao_A Putative phosphatse; st 99.0 1.2E-09 4.2E-14 118.2 11.4 138 696-836 18-280 (283)
49 1yg0_A COP associated protein; 99.0 9.3E-10 3.2E-14 90.4 8.0 64 127-199 2-65 (66)
50 2ldi_A Zinc-transporting ATPas 99.0 1.2E-09 4.2E-14 90.7 8.6 67 126-200 3-69 (71)
51 3mpo_A Predicted hydrolase of 99.0 7E-10 2.4E-14 119.5 9.0 135 699-836 5-266 (279)
52 1yjr_A Copper-transporting ATP 99.0 9.4E-10 3.2E-14 93.0 7.6 68 126-201 4-71 (75)
53 2r8e_A 3-deoxy-D-manno-octulos 99.0 2.2E-09 7.5E-14 109.0 11.6 136 697-836 24-171 (188)
54 1opz_A Potential copper-transp 99.0 1.6E-09 5.4E-14 91.6 8.8 69 125-201 5-73 (76)
55 3p96_A Phosphoserine phosphata 99.0 1.2E-09 4.2E-14 125.1 10.3 123 719-844 256-399 (415)
56 1fvq_A Copper-transporting ATP 99.0 1.3E-09 4.6E-14 91.2 7.9 67 127-202 3-69 (72)
57 1jww_A Potential copper-transp 98.9 1.7E-09 5.7E-14 92.8 8.1 70 126-203 3-72 (80)
58 3m1y_A Phosphoserine phosphata 98.9 1.4E-09 4.6E-14 111.9 8.1 118 718-838 74-212 (217)
59 2ofg_X Zinc-transporting ATPas 98.9 2.8E-09 9.5E-14 98.6 9.3 70 125-202 7-76 (111)
60 2p9j_A Hypothetical protein AQ 98.9 5.3E-09 1.8E-13 103.1 11.6 116 719-836 36-154 (162)
61 2kkh_A Putative heavy metal tr 98.9 5.9E-09 2E-13 93.3 10.2 72 125-204 15-86 (95)
62 1cc8_A Protein (metallochapero 98.9 3.9E-09 1.4E-13 89.4 8.3 64 126-201 5-69 (73)
63 1l7m_A Phosphoserine phosphata 98.9 2.2E-09 7.4E-14 109.5 8.0 113 719-834 76-209 (211)
64 1p6t_A Potential copper-transp 98.9 3E-09 1E-13 103.5 8.5 71 126-204 74-144 (151)
65 2roe_A Heavy metal binding pro 98.9 2.1E-09 7.2E-14 88.8 6.1 61 129-200 3-63 (66)
66 2ew9_A Copper-transporting ATP 98.9 3.4E-09 1.1E-13 102.7 8.3 68 126-201 80-147 (149)
67 2k2p_A Uncharacterized protein 98.9 2.8E-09 9.6E-14 93.5 6.7 64 125-199 21-84 (85)
68 3l7y_A Putative uncharacterize 98.9 4.2E-09 1.4E-13 115.2 9.7 53 784-836 245-297 (304)
69 2xmm_A SSR2857 protein, ATX1; 98.9 3.6E-09 1.2E-13 86.2 6.8 61 128-199 3-63 (64)
70 3fzq_A Putative hydrolase; YP_ 98.8 1.1E-08 3.7E-13 109.6 12.0 55 783-837 216-270 (274)
71 2pq0_A Hypothetical conserved 98.8 1.8E-08 6E-13 107.3 13.2 134 700-836 4-252 (258)
72 2crl_A Copper chaperone for su 98.8 1.8E-08 6.1E-13 90.9 10.5 68 125-204 18-85 (98)
73 3r4c_A Hydrolase, haloacid deh 98.8 9.3E-09 3.2E-13 110.0 10.0 54 784-837 211-264 (268)
74 1y8a_A Hypothetical protein AF 98.8 1.2E-08 4E-13 113.3 11.0 116 719-837 103-278 (332)
75 2kyz_A Heavy metal binding pro 98.8 5.6E-09 1.9E-13 86.5 6.3 62 128-202 3-64 (67)
76 1wr8_A Phosphoglycolate phosph 98.8 1.9E-08 6.5E-13 105.4 11.1 135 700-837 4-223 (231)
77 4eze_A Haloacid dehalogenase-l 98.8 8.1E-09 2.8E-13 113.8 8.2 115 719-836 179-314 (317)
78 1rkq_A Hypothetical protein YI 98.8 1.3E-08 4.5E-13 110.1 9.5 134 700-836 6-267 (282)
79 3kd3_A Phosphoserine phosphohy 98.7 4.5E-08 1.5E-12 100.0 11.2 114 720-835 83-218 (219)
80 2rop_A Copper-transporting ATP 98.7 2.5E-08 8.7E-13 102.3 9.2 71 126-204 122-192 (202)
81 4ap9_A Phosphoserine phosphata 98.7 1.2E-08 4.2E-13 102.9 6.6 109 719-836 79-197 (201)
82 1rlm_A Phosphatase; HAD family 98.6 2.2E-08 7.4E-13 107.6 6.3 53 784-836 208-260 (271)
83 3m9l_A Hydrolase, haloacid deh 98.6 4.6E-08 1.6E-12 99.8 8.4 118 719-838 70-198 (205)
84 1nf2_A Phosphatase; structural 98.6 9E-08 3.1E-12 102.6 10.3 133 700-836 3-259 (268)
85 2ew9_A Copper-transporting ATP 98.6 6E-08 2.1E-12 93.8 8.0 69 125-201 3-71 (149)
86 1rku_A Homoserine kinase; phos 98.6 1.8E-07 6.2E-12 95.4 11.0 116 719-836 69-197 (206)
87 2aj0_A Probable cadmium-transp 98.6 9.3E-08 3.2E-12 80.0 7.0 61 127-202 4-64 (71)
88 1s2o_A SPP, sucrose-phosphatas 98.5 5E-08 1.7E-12 103.2 5.3 53 784-836 179-238 (244)
89 4ex6_A ALNB; modified rossman 98.5 2E-07 6.8E-12 97.0 9.8 119 718-838 103-235 (237)
90 1nrw_A Hypothetical protein, h 98.5 5.5E-07 1.9E-11 97.5 13.6 53 784-836 233-285 (288)
91 2b30_A Pvivax hypothetical pro 98.5 4E-07 1.4E-11 99.5 12.2 136 699-837 27-295 (301)
92 3mc1_A Predicted phosphatase, 98.4 2.7E-07 9.1E-12 95.1 8.2 118 718-837 85-216 (226)
93 1qup_A Superoxide dismutase 1 98.4 4E-07 1.4E-11 94.5 9.2 68 125-204 5-72 (222)
94 1swv_A Phosphonoacetaldehyde h 98.4 4.5E-07 1.6E-11 96.2 9.8 119 719-839 103-260 (267)
95 3fvv_A Uncharacterized protein 98.4 1.4E-06 4.9E-11 90.3 13.1 91 719-811 92-206 (232)
96 1nnl_A L-3-phosphoserine phosp 98.4 3E-07 1E-11 95.2 7.5 115 719-835 86-223 (225)
97 3nas_A Beta-PGM, beta-phosphog 98.4 6.5E-07 2.2E-11 92.8 9.9 116 719-837 92-216 (233)
98 1p6t_A Potential copper-transp 98.4 6.2E-07 2.1E-11 86.9 8.5 66 126-199 6-71 (151)
99 2rop_A Copper-transporting ATP 98.4 4.1E-07 1.4E-11 93.2 7.5 68 125-200 19-89 (202)
100 1xvi_A MPGP, YEDP, putative ma 98.4 2.4E-07 8.2E-12 99.8 5.8 135 699-836 9-267 (275)
101 2wf7_A Beta-PGM, beta-phosphog 98.4 5.6E-07 1.9E-11 92.1 8.2 115 719-836 91-214 (221)
102 2pib_A Phosphorylated carbohyd 98.4 1.4E-06 4.9E-11 88.3 11.2 116 719-836 84-213 (216)
103 1te2_A Putative phosphatase; s 98.3 6.6E-07 2.3E-11 91.7 8.1 112 719-832 94-218 (226)
104 3s6j_A Hydrolase, haloacid deh 98.3 5.9E-07 2E-11 92.7 7.4 118 719-838 91-222 (233)
105 3gyg_A NTD biosynthesis operon 98.3 5E-07 1.7E-11 97.7 7.0 117 720-836 123-280 (289)
106 3zx4_A MPGP, mannosyl-3-phosph 98.3 1.1E-06 3.8E-11 93.5 8.7 51 784-837 195-245 (259)
107 4gxt_A A conserved functionall 98.3 1.4E-06 4.8E-11 98.1 9.4 101 708-808 210-338 (385)
108 3l8h_A Putative haloacid dehal 98.3 2.2E-06 7.6E-11 85.4 9.8 114 719-836 27-176 (179)
109 1jk9_B CCS, copper chaperone f 98.3 1.5E-06 5.1E-11 91.6 8.6 68 125-204 6-73 (249)
110 3d6j_A Putative haloacid dehal 98.3 1.4E-06 4.9E-11 89.0 8.2 115 720-836 90-218 (225)
111 3umb_A Dehalogenase-like hydro 98.2 1.2E-06 4.3E-11 90.5 7.6 118 718-837 98-228 (233)
112 2go7_A Hydrolase, haloacid deh 98.2 1E-06 3.4E-11 88.7 6.1 110 719-835 85-204 (207)
113 3sd7_A Putative phosphatase; s 98.2 2.3E-06 8E-11 89.1 8.6 116 718-835 109-239 (240)
114 3kzx_A HAD-superfamily hydrola 98.2 3.5E-06 1.2E-10 87.1 9.8 113 719-836 103-226 (231)
115 2zos_A MPGP, mannosyl-3-phosph 98.2 1.7E-06 5.7E-11 91.6 6.9 55 700-759 3-57 (249)
116 3u26_A PF00702 domain protein; 98.2 6.1E-06 2.1E-10 85.2 10.8 115 719-836 100-227 (234)
117 3um9_A Haloacid dehalogenase, 98.2 1.6E-06 5.6E-11 89.3 6.3 117 718-836 95-224 (230)
118 3iru_A Phoshonoacetaldehyde hy 98.2 6.4E-06 2.2E-10 87.4 10.9 117 719-837 111-266 (277)
119 2hcf_A Hydrolase, haloacid deh 98.2 5.2E-06 1.8E-10 85.7 9.9 116 719-836 93-226 (234)
120 2hsz_A Novel predicted phospha 98.2 2.5E-06 8.5E-11 89.6 7.5 115 718-834 113-241 (243)
121 4eek_A Beta-phosphoglucomutase 98.1 4.5E-06 1.5E-10 88.1 9.4 118 718-837 109-246 (259)
122 2nyv_A Pgpase, PGP, phosphogly 98.1 6.1E-06 2.1E-10 85.3 10.0 116 718-836 82-209 (222)
123 2gmw_A D,D-heptose 1,7-bisphos 98.1 1E-05 3.4E-10 83.3 11.4 116 719-836 50-204 (211)
124 2om6_A Probable phosphoserine 98.1 4.9E-06 1.7E-10 85.8 9.0 116 719-836 99-230 (235)
125 3e58_A Putative beta-phosphogl 98.1 2.7E-06 9.1E-11 86.1 6.5 113 719-833 89-212 (214)
126 3nuq_A Protein SSM1, putative 98.1 3E-06 1E-10 90.9 6.9 115 719-835 142-278 (282)
127 2fea_A 2-hydroxy-3-keto-5-meth 98.1 7.2E-06 2.5E-10 85.7 9.0 116 718-837 76-217 (236)
128 3dv9_A Beta-phosphoglucomutase 98.1 8.5E-06 2.9E-10 84.8 9.4 116 718-836 107-238 (247)
129 3qxg_A Inorganic pyrophosphata 98.1 7.2E-06 2.5E-10 85.6 8.8 116 718-836 108-239 (243)
130 2rbk_A Putative uncharacterize 98.0 2.1E-05 7.2E-10 83.5 11.7 66 771-836 187-256 (261)
131 3umc_A Haloacid dehalogenase; 98.0 9.5E-06 3.2E-10 84.9 8.8 115 719-836 120-251 (254)
132 1zrn_A L-2-haloacid dehalogena 98.0 5.4E-06 1.8E-10 85.8 6.6 116 719-836 95-223 (232)
133 2hoq_A Putative HAD-hydrolase 98.0 2.4E-05 8.2E-10 81.6 11.6 116 719-836 94-225 (241)
134 2no4_A (S)-2-haloacid dehaloge 98.0 1.1E-05 3.6E-10 84.2 8.2 115 719-835 105-232 (240)
135 1u02_A Trehalose-6-phosphate p 98.0 4.6E-06 1.6E-10 87.8 5.4 62 771-837 160-224 (239)
136 2hdo_A Phosphoglycolate phosph 98.0 1.9E-06 6.7E-11 87.7 2.4 111 719-833 83-206 (209)
137 3umg_A Haloacid dehalogenase; 97.9 1.7E-05 5.7E-10 82.8 8.5 116 719-837 116-248 (254)
138 2fdr_A Conserved hypothetical 97.9 3.1E-05 1E-09 79.5 10.4 112 719-835 87-219 (229)
139 2hi0_A Putative phosphoglycola 97.9 1.8E-05 6.3E-10 82.6 8.6 115 719-835 110-237 (240)
140 2w43_A Hypothetical 2-haloalka 97.9 1.9E-05 6.4E-10 79.9 7.5 111 719-835 74-197 (201)
141 2ah5_A COG0546: predicted phos 97.9 1.4E-05 4.8E-10 81.7 6.5 113 719-834 84-208 (210)
142 3ddh_A Putative haloacid dehal 97.9 1.8E-05 6.1E-10 81.2 7.1 115 719-835 105-233 (234)
143 2qlt_A (DL)-glycerol-3-phospha 97.8 1.9E-05 6.4E-10 84.6 7.4 107 719-825 114-240 (275)
144 3qnm_A Haloacid dehalogenase-l 97.8 2.6E-05 8.7E-10 80.5 8.2 114 719-835 107-232 (240)
145 3smv_A S-(-)-azetidine-2-carbo 97.8 2.9E-05 9.8E-10 80.0 8.1 115 719-836 99-235 (240)
146 3ed5_A YFNB; APC60080, bacillu 97.8 3.6E-05 1.2E-09 79.4 8.5 115 719-836 103-231 (238)
147 3qgm_A P-nitrophenyl phosphata 97.8 6.3E-05 2.2E-09 79.9 10.5 57 699-759 8-67 (268)
148 1qq5_A Protein (L-2-haloacid d 97.8 3.5E-05 1.2E-09 81.1 8.3 114 719-836 93-242 (253)
149 3ib6_A Uncharacterized protein 97.8 6.7E-05 2.3E-09 75.6 9.9 123 719-841 34-180 (189)
150 2fi1_A Hydrolase, haloacid deh 97.8 5E-05 1.7E-09 75.6 8.8 98 720-820 83-189 (190)
151 2wm8_A MDP-1, magnesium-depend 97.8 3.1E-05 1.1E-09 77.8 7.3 87 719-807 68-161 (187)
152 3l5k_A Protein GS1, haloacid d 97.7 1.3E-05 4.5E-10 84.0 3.9 111 719-831 112-239 (250)
153 3pdw_A Uncharacterized hydrola 97.7 6.5E-05 2.2E-09 79.8 8.7 57 699-759 6-65 (266)
154 3k1z_A Haloacid dehalogenase-l 97.7 4.6E-05 1.6E-09 80.8 6.8 116 719-837 106-237 (263)
155 2pr7_A Haloacid dehalogenase/e 97.6 3.2E-05 1.1E-09 72.8 4.7 102 701-806 4-114 (137)
156 3cnh_A Hydrolase family protei 97.5 0.00024 8.3E-09 71.3 9.2 91 719-810 86-185 (200)
157 2i6x_A Hydrolase, haloacid deh 97.5 7.6E-05 2.6E-09 75.7 5.4 93 719-812 89-196 (211)
158 2pke_A Haloacid delahogenase-l 97.4 0.0004 1.4E-08 72.6 10.3 115 719-836 112-241 (251)
159 3f9r_A Phosphomannomutase; try 97.4 8.4E-05 2.9E-09 78.4 4.2 52 700-757 5-56 (246)
160 3kbb_A Phosphorylated carbohyd 97.4 0.00066 2.2E-08 69.1 10.9 115 719-836 84-213 (216)
161 2o2x_A Hypothetical protein; s 97.3 0.00031 1E-08 72.3 6.9 89 718-806 55-177 (218)
162 2oda_A Hypothetical protein ps 97.2 0.0014 4.8E-08 66.4 11.1 113 719-836 36-184 (196)
163 3vay_A HAD-superfamily hydrola 97.2 0.00068 2.3E-08 69.4 8.4 109 719-836 105-227 (230)
164 2b0c_A Putative phosphatase; a 97.2 8.9E-05 3.1E-09 74.8 1.6 95 719-813 91-195 (206)
165 2gfh_A Haloacid dehalogenase-l 97.2 0.001 3.6E-08 70.3 10.0 114 719-835 121-249 (260)
166 1qyi_A ZR25, hypothetical prot 97.1 0.0011 3.9E-08 74.2 10.0 115 719-836 215-374 (384)
167 1vjr_A 4-nitrophenylphosphatas 97.1 0.0016 5.4E-08 69.0 10.4 58 698-759 16-76 (271)
168 4dcc_A Putative haloacid dehal 97.0 0.00047 1.6E-08 71.0 5.5 97 719-816 112-223 (229)
169 2fue_A PMM 1, PMMH-22, phospho 97.0 0.0002 6.9E-09 76.1 2.5 58 771-828 197-260 (262)
170 3pct_A Class C acid phosphatas 96.9 0.0007 2.4E-08 71.4 5.0 81 718-798 100-188 (260)
171 3epr_A Hydrolase, haloacid deh 96.9 0.0019 6.6E-08 68.3 8.5 57 699-759 5-64 (264)
172 3ocu_A Lipoprotein E; hydrolas 96.8 0.00058 2E-08 72.2 4.1 81 718-798 100-188 (262)
173 3nvb_A Uncharacterized protein 96.7 0.0013 4.5E-08 73.3 6.0 87 720-808 257-353 (387)
174 4gib_A Beta-phosphoglucomutase 96.7 0.0038 1.3E-07 65.4 9.3 109 717-831 114-232 (250)
175 4as2_A Phosphorylcholine phosp 96.7 0.0021 7.3E-08 70.5 7.1 96 713-808 137-282 (327)
176 2amy_A PMM 2, phosphomannomuta 96.6 0.0005 1.7E-08 72.1 1.8 52 771-822 188-245 (246)
177 2fpr_A Histidine biosynthesis 96.6 0.00065 2.2E-08 67.6 2.4 93 719-811 42-162 (176)
178 2x4d_A HLHPP, phospholysine ph 96.6 0.016 5.6E-07 60.4 13.3 61 699-759 12-75 (271)
179 2p11_A Hypothetical protein; p 96.6 0.0008 2.7E-08 69.6 2.6 113 718-835 95-222 (231)
180 1ltq_A Polynucleotide kinase; 96.4 0.0055 1.9E-07 66.1 8.5 96 716-811 185-299 (301)
181 2i33_A Acid phosphatase; HAD s 96.1 0.0034 1.2E-07 66.5 4.3 81 718-799 100-188 (258)
182 3gwi_A Magnesium-transporting 96.1 0.015 5.2E-07 57.4 8.5 112 608-719 11-165 (170)
183 2c4n_A Protein NAGD; nucleotid 95.8 0.0097 3.3E-07 61.1 6.3 50 775-824 185-242 (250)
184 2zg6_A Putative uncharacterize 95.4 0.0099 3.4E-07 60.6 4.2 86 719-808 95-190 (220)
185 4g9b_A Beta-PGM, beta-phosphog 95.2 0.028 9.5E-07 58.4 7.1 101 718-824 94-204 (243)
186 1yns_A E-1 enzyme; hydrolase f 94.9 0.045 1.5E-06 57.7 7.8 107 718-824 129-250 (261)
187 2b82_A APHA, class B acid phos 94.4 0.01 3.5E-07 60.7 1.1 88 720-809 89-185 (211)
188 3i28_A Epoxide hydrolase 2; ar 94.1 0.13 4.5E-06 59.2 10.0 91 719-809 100-203 (555)
189 2pk2_A Cyclin-T1, protein TAT; 93.2 0.016 5.3E-07 64.4 0.0 15 63-77 265-279 (358)
190 2i7d_A 5'(3')-deoxyribonucleot 93.0 0.0017 5.8E-08 65.3 -7.6 80 718-805 72-157 (193)
191 2oyc_A PLP phosphatase, pyrido 92.8 0.19 6.6E-06 54.0 8.0 113 719-836 156-297 (306)
192 2ho4_A Haloacid dehalogenase-l 92.7 0.03 1E-06 58.2 1.4 108 720-836 123-255 (259)
193 3zvl_A Bifunctional polynucleo 92.5 0.1 3.5E-06 59.1 5.5 108 699-806 58-214 (416)
194 2g80_A Protein UTR4; YEL038W, 91.4 0.29 9.8E-06 51.3 6.9 83 718-806 124-227 (253)
195 1yv9_A Hydrolase, haloacid deh 90.4 0.49 1.7E-05 49.2 7.7 105 717-824 124-249 (264)
196 2obb_A Hypothetical protein; s 88.3 0.51 1.7E-05 44.8 5.2 66 700-770 4-77 (142)
197 1q92_A 5(3)-deoxyribonucleotid 87.2 0.008 2.7E-07 60.5 -8.7 83 719-809 75-164 (197)
198 1zjj_A Hypothetical protein PH 86.6 0.58 2E-05 48.9 5.1 96 701-806 3-105 (263)
199 3bwv_A Putative 5'(3')-deoxyri 85.8 1.8 6E-05 42.1 7.9 99 719-835 69-175 (180)
200 1zjj_A Hypothetical protein PH 85.0 4.8 0.00016 41.7 11.3 110 718-834 129-259 (263)
201 3kc2_A Uncharacterized protein 83.5 1.2 4.2E-05 48.9 6.0 99 699-808 13-117 (352)
202 2hhl_A CTD small phosphatase-l 83.3 0.22 7.5E-06 50.1 -0.1 87 718-806 67-160 (195)
203 2ght_A Carboxy-terminal domain 81.6 0.28 9.4E-06 48.7 -0.1 86 719-806 55-147 (181)
204 2pju_A Propionate catabolism o 79.6 7.7 0.00026 39.6 9.9 109 721-849 92-202 (225)
205 2q5c_A NTRC family transcripti 79.4 5.8 0.0002 39.6 8.8 108 721-847 80-189 (196)
206 2rbk_A Putative uncharacterize 78.2 1.6 5.6E-05 45.2 4.5 86 701-790 4-108 (261)
207 2hx1_A Predicted sugar phospha 74.9 4.5 0.00015 42.4 6.9 100 698-807 13-120 (284)
208 2jc9_A Cytosolic purine 5'-nuc 71.3 5.3 0.00018 46.1 6.6 83 722-805 249-386 (555)
209 2amy_A PMM 2, phosphomannomuta 71.0 2.3 8E-05 43.7 3.4 54 698-758 5-58 (246)
210 1xpj_A Hypothetical protein; s 69.8 8.8 0.0003 35.0 6.8 73 701-784 3-78 (126)
211 4gwb_A Peptide methionine sulf 69.4 5.8 0.0002 38.4 5.5 40 138-177 9-63 (168)
212 2fue_A PMM 1, PMMH-22, phospho 68.4 2.7 9.4E-05 43.7 3.3 52 698-753 12-63 (262)
213 1fvg_A Peptide methionine sulf 64.6 6.9 0.00024 38.9 5.0 40 138-177 50-108 (199)
214 2oyc_A PLP phosphatase, pyrido 64.0 5.9 0.0002 42.1 4.9 58 698-759 20-80 (306)
215 1ff3_A Peptide methionine sulf 62.9 7.4 0.00025 39.0 5.0 40 138-177 49-107 (211)
216 1u02_A Trehalose-6-phosphate p 62.8 3.5 0.00012 42.3 2.7 55 701-756 3-59 (239)
217 2j89_A Methionine sulfoxide re 62.6 7.7 0.00026 39.9 5.0 40 138-177 101-159 (261)
218 2l6f_A Focal adhesion kinase 1 66.4 1.6 5.5E-05 43.2 0.0 23 82-104 176-198 (215)
219 1nwa_A Peptide methionine sulf 61.0 9.4 0.00032 38.0 5.2 40 138-177 32-86 (203)
220 2hx1_A Predicted sugar phospha 61.0 3.1 0.0001 43.7 1.9 85 721-807 147-250 (284)
221 3bqh_A PILB, peptide methionin 59.2 8.7 0.0003 38.0 4.6 40 138-177 9-67 (193)
222 3n28_A Phosphoserine phosphata 57.4 8.6 0.00029 41.4 4.8 49 712-760 36-95 (335)
223 2f3j_A RNA and export factor b 50.4 1.4E+02 0.0047 28.7 11.9 47 126-172 87-138 (177)
224 3e0m_A Peptide methionine sulf 48.6 17 0.00059 38.6 5.1 40 138-177 9-65 (313)
225 2ho4_A Haloacid dehalogenase-l 46.5 18 0.00061 36.7 4.9 57 699-759 7-66 (259)
226 3lvj_C Sulfurtransferase TUSA; 43.7 56 0.0019 27.3 6.7 58 127-202 10-67 (82)
227 3umv_A Deoxyribodipyrimidine p 43.5 62 0.0021 37.1 9.2 72 723-797 96-175 (506)
228 3hz7_A Uncharacterized protein 40.9 31 0.0011 29.4 4.7 56 129-203 3-60 (87)
229 1yv9_A Hydrolase, haloacid deh 39.3 22 0.00077 36.2 4.3 57 699-759 5-65 (264)
230 1je3_A EC005, hypothetical 8.6 39.3 91 0.0031 27.1 7.5 57 127-201 27-83 (97)
231 2cpz_A CUG triplet repeat RNA- 38.6 84 0.0029 27.4 7.6 45 128-172 26-76 (115)
232 2l6f_A Focal adhesion kinase 1 44.0 6.9 0.00023 38.7 0.0 18 87-104 184-201 (215)
233 1jdq_A TM006 protein, hypothet 37.7 1.8E+02 0.0063 25.1 9.3 57 128-202 27-83 (98)
234 3pim_A Peptide methionine sulf 37.0 18 0.00061 35.6 2.8 40 138-177 26-92 (187)
235 2c4n_A Protein NAGD; nucleotid 36.1 40 0.0014 33.3 5.5 56 700-759 4-62 (250)
236 3gmi_A UPF0348 protein MJ0951; 36.0 1.3E+02 0.0044 32.7 9.8 90 709-799 53-158 (357)
237 2raq_A Conserved protein MTH88 35.7 1.3E+02 0.0045 26.0 7.6 69 125-202 6-79 (97)
238 2e5i_A Heterogeneous nuclear r 35.6 2.3E+02 0.008 25.5 10.1 50 124-173 22-72 (124)
239 3gyg_A NTD biosynthesis operon 35.1 23 0.00079 36.8 3.6 56 699-759 22-85 (289)
240 1ccw_A Protein (glutamate muta 33.1 2.1E+02 0.0072 26.1 9.6 71 694-766 27-119 (137)
241 1qwg_A PSL synthase;, (2R)-pho 32.7 94 0.0032 32.0 7.4 104 721-827 54-170 (251)
242 3bpd_A Uncharacterized protein 32.3 43 0.0015 29.1 4.0 69 125-202 6-79 (100)
243 1pg5_A Aspartate carbamoyltran 30.8 1.5E+02 0.005 31.4 8.9 89 696-794 62-160 (299)
244 2x3d_A SSO6206; unknown functi 30.6 66 0.0023 27.8 4.9 70 125-203 4-79 (96)
245 3vnd_A TSA, tryptophan synthas 30.5 4.6E+02 0.016 27.0 12.7 82 716-800 129-222 (267)
246 2yxb_A Coenzyme B12-dependent 30.0 1.4E+02 0.0049 28.2 8.1 69 709-779 71-142 (161)
247 2q5c_A NTRC family transcripti 29.9 1E+02 0.0035 30.3 7.2 72 722-799 39-112 (196)
248 3luf_A Two-component system re 29.7 1.8E+02 0.006 29.6 9.4 103 724-828 63-179 (259)
249 3r7f_A Aspartate carbamoyltran 29.7 81 0.0028 33.5 6.7 121 696-825 60-210 (304)
250 1x4c_A Splicing factor, argini 29.1 1.9E+02 0.0065 24.8 8.2 55 128-195 16-70 (108)
251 1owl_A Photolyase, deoxyribodi 27.3 1.4E+02 0.0049 33.8 8.8 65 723-789 58-127 (484)
252 1ml4_A Aspartate transcarbamoy 25.4 2E+02 0.0068 30.5 8.8 71 721-794 87-166 (308)
253 3p2o_A Bifunctional protein fo 25.4 1E+02 0.0035 32.4 6.4 67 716-782 12-89 (285)
254 4a5o_A Bifunctional protein fo 24.9 1.1E+02 0.0039 32.0 6.7 67 716-782 13-91 (286)
255 1wf1_A RNA-binding protein RAL 24.2 3E+02 0.01 23.5 8.6 44 128-173 28-72 (110)
256 3rjz_A N-type ATP pyrophosphat 24.1 1.4E+02 0.0049 30.3 7.1 69 722-792 15-99 (237)
257 3csu_A Protein (aspartate carb 23.6 2.8E+02 0.0095 29.4 9.5 89 696-794 65-165 (310)
258 1u3d_A Cryptochrome 1 apoprote 21.6 2.3E+02 0.0079 32.2 9.1 65 725-791 68-138 (509)
259 1pav_A Hypothetical protein TA 21.6 62 0.0021 26.6 3.2 56 128-201 7-62 (78)
260 2c2x_A Methylenetetrahydrofola 20.8 1.4E+02 0.0046 31.4 6.2 68 716-783 11-89 (281)
261 2jmz_A Hypothetical protein MJ 20.6 55 0.0019 32.0 3.1 28 375-402 111-138 (186)
262 2e5h_A Zinc finger CCHC-type a 20.2 2.9E+02 0.01 22.6 7.4 44 129-172 18-67 (94)
No 1
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.5e-123 Score=1138.17 Aligned_cols=712 Identities=35% Similarity=0.538 Sum_probs=640.3
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccCCC
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMGT 206 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 206 (932)
++++.|+||+|++|+++||++|++++||.+++||+.++++.|.||+...+. +++.++++++||++...++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~--------~~i~~ai~~~Gy~~~~~~~~~ 74 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDF--------ETIKRVIEDLGYGVVDEQAAV 74 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHCCEESSCCCCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCH--------HHHHHHHHhcCCccccccccc
Confidence 468999999999999999999999999999999999999999999887776 889999999999986544321
Q ss_pred ccchhhhHHHHHHHhHhHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHH
Q 002354 207 DNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGV 286 (932)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~ 286 (932)
... + ++.++..++++++++++++.++..+ ++.. |. ..|+.+++++|+++|+|||||++||
T Consensus 75 ~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-----~~~~~~~l~~~~~~~~g~~~~~~a~ 134 (723)
T 3j09_A 75 SAE-------V----EHLSRMKRKLYVAAFAGVLLLFLAH---FISL-PY-----EDFVQLLIALPAIFYSGSSIFKAAF 134 (723)
T ss_dssp CCC-------C----CCCCCSCCCSSSTTTTHHHHHHHTT---SSCS-SS-----SCCSCCSTHHHHHHHHHHHHHHHTC
T ss_pred chh-------h----HHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc-ch-----HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 110 0 1223445677777666665543221 1111 11 2366778899999999999999999
Q ss_pred HHhhcCCCCchhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEE
Q 002354 287 KSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKAR 366 (932)
Q Consensus 287 ~~l~~~~~nmd~Li~l~~~~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~ 366 (932)
++|++|.+|||+|+++|++++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|++++
T Consensus 135 ~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~ 214 (723)
T 3j09_A 135 SALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV 214 (723)
T ss_dssp CTTTTCSTTSCSSCSCHHHHHHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEE
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeE
Confidence 99999999999999999999999999988764222234899999999999999999999999999999999999999999
Q ss_pred EEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEE
Q 002354 367 LLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVE 446 (932)
Q Consensus 367 vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~ 446 (932)
|+|+ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+||.||+||++.+|.++++
T Consensus 215 v~r~----g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~ 290 (723)
T 3j09_A 215 VIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIR 290 (723)
T ss_dssp EEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEE
T ss_pred EEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEE
Confidence 9986 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHH
Q 002354 447 VRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCS 526 (932)
Q Consensus 447 V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 526 (932)
|+++|.+|.+++|++++++++.+++|+|+.+|+++.+|++++++++++++++|+++.. .++..++.++++
T Consensus 291 v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~ 360 (723)
T 3j09_A 291 ATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIA 360 (723)
T ss_dssp EEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT----------CTTCCSHHHHHH
T ss_pred EEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988766532 234557888999
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCC
Q 002354 527 VLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP 606 (932)
Q Consensus 527 vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~ 606 (932)
+++++|||+|++++|+++..++.+++++|+++|+++++|.+|++|+||||||||||+|+|+|.+++..
T Consensus 361 vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~------------ 428 (723)
T 3j09_A 361 VLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL------------ 428 (723)
T ss_dssp HHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES------------
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCc
Q 002354 607 IHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS 686 (932)
Q Consensus 607 ~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~ 686 (932)
+.++++++.+++.+|.+++||+++|++++++..+.... +..+++..+++|+.+ +.+.+|+++++.+.+....
T Consensus 429 --~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~--~~~~~~~~~g~g~~~----~~~~~g~~~~~~~~~~~~~ 500 (723)
T 3j09_A 429 --NGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVS 500 (723)
T ss_dssp --SSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCC
T ss_pred --CCCHHHHHHHHHHHhccCCCchhHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhcCCCcc
Confidence 24578899999999999999999999999998877532 346788999999987 6789999999998776543
Q ss_pred h--hhhHHHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCcee
Q 002354 687 T--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL 764 (932)
Q Consensus 687 ~--~~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~ 764 (932)
. ....+..+.++.+++++++|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|++ .++
T Consensus 501 ~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~ 578 (723)
T 3j09_A 501 NEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVI 578 (723)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc--EEE
Confidence 2 122344567899999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred cccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002354 765 SGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 844 (932)
Q Consensus 765 ~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 844 (932)
++++|++|.++++.+|++ +.|+|+|||.||+|||++||+|||||+|++.++++||+|+++++++++.+++++||+++++
T Consensus 579 ~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~ 657 (723)
T 3j09_A 579 AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSK 657 (723)
T ss_dssp CSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccc
Q 002354 845 VKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 903 (932)
Q Consensus 845 i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~ 903 (932)
|+||+.|+++||++++|+|+++++|++|+.++|++|+++|.+||++|++||+||++.++
T Consensus 658 i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 716 (723)
T 3j09_A 658 IKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 716 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999976543
No 2
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=3e-120 Score=1101.79 Aligned_cols=647 Identities=37% Similarity=0.589 Sum_probs=594.1
Q ss_pred hHhhccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCCchhHHHH
Q 002354 223 RLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGL 302 (932)
Q Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~nmd~Li~l 302 (932)
+.++.++|++++++++++.++..+..++ ...++......|+.++|++|+++|+|||||++||++|++|.+|||+|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~l 154 (736)
T 3rfu_A 77 EYLDMRRRFWIALMLTIPVVILEMGGHG--LKHFISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAM 154 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCC--TTSSCSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCChHHHHHH
Confidence 3445667899999998887765543222 01111122345889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccc----------ccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecC
Q 002354 303 GAVSSFTVSSLAALVPKL----------GWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND 372 (932)
Q Consensus 303 ~~~~a~~~s~~~~~~~~~----------~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~ 372 (932)
|+.++|+||++.++.+.. ..+.||++++++++++++|+++|.++++|+++++++|.++.|+++++++++
T Consensus 155 ~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~d- 233 (736)
T 3rfu_A 155 GIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKED- 233 (736)
T ss_dssp HHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETT-
T ss_pred HHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC-
Confidence 999999999999886421 125799999999999999999999999999999999999999999999843
Q ss_pred CCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCC
Q 002354 373 AKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGG 452 (932)
Q Consensus 373 ~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~ 452 (932)
|++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|.+|+.|++||+|.+|.++++|+++|.
T Consensus 234 --g~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~ 311 (736)
T 3rfu_A 234 --GSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGS 311 (736)
T ss_dssp --EEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCST
T ss_pred --CEEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEech
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHh
Q 002354 453 ETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVAC 532 (932)
Q Consensus 453 ~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~ 532 (932)
+|.++||++++++++.+++|+|+.+|+++.+|+++++++++++|++|++++.. ..|..++.+++++|+++|
T Consensus 312 ~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~---------~~~~~~l~~ai~vlviac 382 (736)
T 3rfu_A 312 DTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ---------PALSYGLIAAVSVLIIAC 382 (736)
T ss_dssp TSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------SSTTHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------chHHHHHHHHHHhHHHhh
Confidence 99999999999999999999999999999999999999999999999887532 135678999999999999
Q ss_pred hhcchhhHHHHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCH
Q 002354 533 PCALGLATPTAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE 612 (932)
Q Consensus 533 P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 612 (932)
||+|++++|++++.++.+++++|+++|+++++|+++++|+||||||||||+|+|+|.+++. ++.++
T Consensus 383 PcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~--------------~~~~~ 448 (736)
T 3rfu_A 383 PCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVT--------------DDFVE 448 (736)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEE--------------SSSCH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEe--------------cCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999983 34567
Q ss_pred HHHHHHHHHhcccCCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhh-hH
Q 002354 613 TEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQ-EV 691 (932)
Q Consensus 613 ~~ll~laa~~e~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~-~~ 691 (932)
++++.+++++|..++||+++|+++++++.+.... +..+|+..+|+|+.+.++++.+.+|+++++.+.+.+..... ..
T Consensus 449 ~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~~~~--~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~ 526 (736)
T 3rfu_A 449 DNALALAAALEHQSEHPLANAIVHAAKEKGLSLG--SVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFEKA 526 (736)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHTTCCCCC--CCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHhcCCCcc--CcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhHHHHHH
Confidence 8999999999999999999999999998776532 34678889999999999999999999999998877654332 33
Q ss_pred HHHHhCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhh
Q 002354 692 EMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771 (932)
Q Consensus 692 ~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~ 771 (932)
+..+.+|.+++++++|++++|++.++|++|++++++|++|+++|++++|+|||+..++..+++++||+ .++++++|++
T Consensus 527 ~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~~~P~~ 604 (736)
T 3rfu_A 527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAEIMPED 604 (736)
T ss_dssp HHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECSCCHHH
T ss_pred HHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEecCHHH
Confidence 44667899999999999999999999999999999999999999999999999999999999999998 7999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWW 851 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~ 851 (932)
|.++|+.+|++|+.|+|+|||.||+|||++||+|||||+|+|.++++||+|++++++++|++++++||+++++||||++|
T Consensus 605 K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~ 684 (736)
T 3rfu_A 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFF 684 (736)
T ss_dssp HHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccc
Q 002354 852 AFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 901 (932)
Q Consensus 852 a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~ 901 (932)
+++||+++||+|+|++||++|+.++|++|+++|.+||++|++||+||++.
T Consensus 685 a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~~ 734 (736)
T 3rfu_A 685 AFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRV 734 (736)
T ss_dssp HHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999999999999988899999999999999999999999754
No 3
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.2e-112 Score=1026.38 Aligned_cols=632 Identities=37% Similarity=0.566 Sum_probs=575.7
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCCchhHHHHHHH
Q 002354 226 ESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILDGVKSLFKGAPNMNTLVGLGAV 305 (932)
Q Consensus 226 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~nmd~Li~l~~~ 305 (932)
+.++|++++++++++.++..+ ++. .|. ..|+.+++++|+++|+|||||++||+++++|.+|||+|+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-----~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~l~~~ 75 (645)
T 3j08_A 5 RMKRKLYVAAFAGVLLLFLAH---FIS-LPY-----EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVG 75 (645)
T ss_dssp SSSSSSSSSSCSHHHHHHHTT---TCC-SCC-----CSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---Hhh-cch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 445678888877777665432 111 111 23677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCc
Q 002354 306 SSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSL 385 (932)
Q Consensus 306 ~a~~~s~~~~~~~~~~~~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~L 385 (932)
++|++|++.++....+...||++++++++++++|+++|.++++|+++.+++|.++.|++++|+|+ |++++|++++|
T Consensus 76 ~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~----g~~~~i~~~~l 151 (645)
T 3j08_A 76 AAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRD----GKEIAVPVEEV 151 (645)
T ss_dssp HHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEET----TEEEEEEGGGC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC----CEEEEEEHHHC
Confidence 99999999877532222348999999999999999999999999999999999999999999986 58999999999
Q ss_pred cCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHH
Q 002354 386 HVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (932)
Q Consensus 386 v~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 465 (932)
+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||++.+|.++++|+++|.+|.+++|.+++++
T Consensus 152 ~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~ 231 (645)
T 3j08_A 152 AVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED 231 (645)
T ss_dssp CTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSC
T ss_pred CCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHH
Q 002354 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAML 545 (932)
Q Consensus 466 a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~ 545 (932)
++.+++|+|+.+|+++.+|++++++++++++++|+++.. .++..++.+++++++++|||+|++++|+++.
T Consensus 232 a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----------~~~~~~~~~~i~vlvia~P~aL~la~p~a~~ 301 (645)
T 3j08_A 232 AMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----------APLLFAFTTLIAVLVVACPCAFGLATPTALT 301 (645)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS----------CSCCCTTTTTHHHHHHHSCTTHHHHHHHHHH
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999988866532 1234456778999999999999999999999
Q ss_pred HHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc
Q 002354 546 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 625 (932)
Q Consensus 546 ~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~ 625 (932)
.++.+++++|+++|+++++|.++++|+||||||||||+|+|+|.+++.. +.++++++++++.+|.+
T Consensus 302 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~--------------~~~~~~~l~~aa~~e~~ 367 (645)
T 3j08_A 302 VGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL--------------NGDERELLRLAAIAERR 367 (645)
T ss_dssp HHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES--------------SSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC--------------CCCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999875 24578899999999999
Q ss_pred CCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCch--hhhHHHHHhCCCeEEE
Q 002354 626 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTST--FQEVEMEDLMNQSLVY 703 (932)
Q Consensus 626 s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~--~~~~~~~~~~g~~~~~ 703 (932)
++||+++|+++++++.+.... +.+++...+|+|+.+ +.+.+|+++++.+.+..... ....+..+.++.++++
T Consensus 368 s~hPla~Aiv~~a~~~g~~~~--~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 441 (645)
T 3j08_A 368 SEHPIAEAIVKKALEHGIELG--EPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVI 441 (645)
T ss_dssp CCSHHHHHHHHHHHHTTCCCC--SCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEE
T ss_pred CCChhHHHHHHHHHhcCCCcC--CccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEE
Confidence 999999999999998877632 346788999999887 67899999999887765432 1223345677999999
Q ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCC
Q 002354 704 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDE 783 (932)
Q Consensus 704 va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g 783 (932)
+++|++++|++.++|++||+++++|++|+++|++++|+|||+..+++.+++++|++ .++++++|++|.++++.+|++
T Consensus 442 va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~~P~~K~~~v~~l~~~- 518 (645)
T 3j08_A 442 VARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK- 518 (645)
T ss_dssp EEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTT-
T ss_pred EEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeCCHHhHHHHHHHHhhC-
Confidence 99999999999999999999999999999999999999999999999999999998 899999999999999999998
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIA 863 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la 863 (932)
+.|+|+|||.||++||+.||+|||||+|++.++++||+++.+++++++.+++++||+++++||||+.|+++||++++|+|
T Consensus 519 ~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 519 EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccc
Q 002354 864 AGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFS 903 (932)
Q Consensus 864 ~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~ 903 (932)
+++++|++|+.++|++|+++|.+||++|++||+||++.++
T Consensus 599 ~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~~ 638 (645)
T 3j08_A 599 AGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVP 638 (645)
T ss_dssp TTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCCSC
T ss_pred HHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhccCCC
Confidence 9999999999999999999999999999999999976543
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=7.2e-86 Score=814.04 Aligned_cols=503 Identities=22% Similarity=0.277 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEee
Q 002354 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408 (932)
Q Consensus 329 ~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G 408 (932)
+++++++++++..++.++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 144 ~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~Rd----G~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g 219 (920)
T 1mhs_A 144 FGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRD----GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTD 219 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECS----SSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEEC----CEEEEEEHHHcCCCCEEEeCCCCccccceEEEec
Confidence 355667778888899999999999999999999999999987 5899999999999999999999999999999999
Q ss_pred ee--EEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHhhHHH
Q 002354 409 RS--TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (932)
Q Consensus 409 ~~--~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~~~~~ 486 (932)
++ .||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.++++
T Consensus 220 ~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~ 299 (920)
T 1mhs_A 220 DAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLI 299 (920)
T ss_dssp SSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHH
Confidence 74 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCchHHHh
Q 002354 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGGNILEK 566 (932)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~ 566 (932)
+++++++++|+.|++ .+.++..++.+++++++++|||+|++++|++++.+..+++++|+++|+++++|+
T Consensus 300 ~~~~~~~i~~~~~~~-----------~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~ 368 (920)
T 1mhs_A 300 LVIFTLLIVWVSSFY-----------RSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIES 368 (920)
T ss_dssp HHHHHHHHHHHTTTT-----------TTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHH
T ss_pred HHHHHHHHHHHHHHh-----------cCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhh
Confidence 877777665554322 234577889999999999999999999999999999999999999999999999
Q ss_pred cccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH-HhcccCC--CcHHHHHHHHHHhcCC
Q 002354 567 FAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAA-GVESNTV--HPIGKAIVEAAEFSNC 643 (932)
Q Consensus 567 lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa-~~e~~s~--hPi~~Ai~~~a~~~~~ 643 (932)
||++|+||||||||||+|+|+|.+++..+ ++++++++..++ +.+..+. ||+++|+++++...+.
T Consensus 369 Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~-------------g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~ 435 (920)
T 1mhs_A 369 LAGVEILCSDKTGTLTKNKLSLHDPYTVA-------------GVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPR 435 (920)
T ss_dssp HHTCCEEEEETBTTTBSSCSCCCCCBCCS-------------CCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSS
T ss_pred hccCcEEEECCCCCccccceeEEEEeecC-------------CCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhccc
Confidence 99999999999999999999999886541 222234443332 2344455 9999999998876543
Q ss_pred cccccc-CCCeE----EecCCeeEEEEc---Ce--EEEeecHHHHhhcCCCCch---------hhhHHHHHhCCCeEEEE
Q 002354 644 QNVKVA-DGTFI----EEPGSGTVAIIE---DR--KVSVGTIDWLRSHGVDTST---------FQEVEMEDLMNQSLVYV 704 (932)
Q Consensus 644 ~~~~~~-~~~~~----~~~g~g~~~~i~---~~--~~~~Gs~~~i~~~~~~~~~---------~~~~~~~~~~g~~~~~v 704 (932)
...... ..... ...++++.+.++ ++ .++||+++++.+.|....+ .+..+.++.+|.+++++
T Consensus 436 ~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~v 515 (920)
T 1mhs_A 436 AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515 (920)
T ss_dssp CCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEE
T ss_pred chhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 211111 01111 124778888774 33 4779999999988754211 01223456789999999
Q ss_pred EEC-----CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 705 GVD-----NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 705 a~~-----~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
+++ .+|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||...
T Consensus 516 A~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~ 595 (920)
T 1mhs_A 516 ARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGS 595 (920)
T ss_dssp CCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGG
T ss_pred EEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHH
Confidence 975 389999999999999999999999999999999999999999999999999631
Q ss_pred ---------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH
Q 002354 762 ---------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 762 ---------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
.+|+|++|+||.++|+.||++|+.|+|+|||.||+|||++||+|||||+|++.++++||+|+++++++.|.
T Consensus 596 el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~ 675 (920)
T 1mhs_A 596 EVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAII 675 (920)
T ss_dssp GGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHH
T ss_pred HHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 833 VALELSRLTMKTVKQNLWWAFGYNIVG 859 (932)
Q Consensus 833 ~~i~~gR~~~~~i~~nl~~a~~~N~i~ 859 (932)
+++++||++++||+|++.|.++.|+..
T Consensus 676 ~ai~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 676 DALKTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999864
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=8.6e-83 Score=805.44 Aligned_cols=582 Identities=21% Similarity=0.268 Sum_probs=461.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeE
Q 002354 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (932)
Q Consensus 324 ~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDg 403 (932)
.++..++++++++++...++.++++|+++.+++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||
T Consensus 133 ~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 208 (1028)
T 2zxe_A 133 DNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRD----GEKSTINAEFVVAGDLVEVKGGDRIPADL 208 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEET----TEEEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEEC----CEEEEEEHHHCCcCCEEEECCCCEeeceE
Confidence 34445666777788888899999999999999999999999999987 58999999999999999999999999999
Q ss_pred EEEeee-eEEeccccccCCCceeecCCCc----------cccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCCh
Q 002354 404 VVRAGR-STVDESSFTGEPLPVTKIPESE----------VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472 (932)
Q Consensus 404 vll~G~-~~VDES~LTGES~Pv~K~~g~~----------V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~ 472 (932)
+|++|+ +.||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|
T Consensus 209 ~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 288 (1028)
T 2zxe_A 209 RIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTP 288 (1028)
T ss_dssp EEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCH
T ss_pred EEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCc
Confidence 999996 7999999999999999999864 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhh
Q 002354 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGA 552 (932)
Q Consensus 473 lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a 552 (932)
+|+.+++++.+++++++++++++|+++++.+ .+|..++.+++++++++|||+|++++|++++.+..+++
T Consensus 289 lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----------~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ma 357 (1028)
T 2zxe_A 289 IAIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 357 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----------CcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998888888765432 24677888999999999999999999999999999999
Q ss_pred hcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCC----CCCCCCH--HHHHHHHHHh----
Q 002354 553 TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQN----PIHPLSE--TEILKFAAGV---- 622 (932)
Q Consensus 553 ~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~----~~~~~~~--~~ll~laa~~---- 622 (932)
++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+....... ..+..++ .+++..++.+
T Consensus 358 k~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 437 (1028)
T 2zxe_A 358 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAV 437 (1028)
T ss_dssp TTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCE
T ss_pred hCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999987653322111000 0011122 2444443332
Q ss_pred -c-ccCC----------CcHHHHHHHHHHhcCCccc--cccCCCeEEec---CCeeEEEE-------cC--eEEEeecHH
Q 002354 623 -E-SNTV----------HPIGKAIVEAAEFSNCQNV--KVADGTFIEEP---GSGTVAII-------ED--RKVSVGTID 676 (932)
Q Consensus 623 -e-~~s~----------hPi~~Ai~~~a~~~~~~~~--~~~~~~~~~~~---g~g~~~~i-------~~--~~~~~Gs~~ 676 (932)
+ ..++ +|.+.|++++++..+.... ........+.| .+..+..+ ++ ..++||+++
T Consensus 438 ~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e 517 (1028)
T 2zxe_A 438 FQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPE 517 (1028)
T ss_dssp ECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHH
T ss_pred eecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcH
Confidence 1 1234 4566799999876522110 00111122222 23322222 12 248899999
Q ss_pred HHhhcCCCC---------ch------hhhHHHHHhCCCeEEEEEE------------------------CCEEEEEEEec
Q 002354 677 WLRSHGVDT---------ST------FQEVEMEDLMNQSLVYVGV------------------------DNMLAGLIYVE 717 (932)
Q Consensus 677 ~i~~~~~~~---------~~------~~~~~~~~~~g~~~~~va~------------------------~~~~lG~i~l~ 717 (932)
.+.+.|... .. .+..+.+..+|.+++++++ |++|+|+++++
T Consensus 518 ~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~ 597 (1028)
T 2zxe_A 518 RILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMI 597 (1028)
T ss_dssp HHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEE
T ss_pred HHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccC
Confidence 998877421 00 0112335678999998874 45899999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------------------------
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------ 761 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------ 761 (932)
|++||+++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 99999999999999999999999999999999999999999732
Q ss_pred ---------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeC
Q 002354 762 ---------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMG 825 (932)
Q Consensus 762 ---------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~ 825 (932)
.+|+|++|++|..+|+.+|+.|+.|+|+|||.||+|||++||+||||| +|++.++++||+|+.+
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~ 757 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLD 757 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETT
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecC
Confidence 289999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhccccccc
Q 002354 826 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSK 905 (932)
Q Consensus 826 ~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~ 905 (932)
+++++|.+++++||++++||++|+.|.+++|+..+...+...+......++|+ ......-+..++.++.|.+ .+.
T Consensus 758 ~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~---qil~inl~~d~~pa~al~~--e~~ 832 (1028)
T 2zxe_A 758 DNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTV---TILCIDLGTDMVPAISLAY--EQA 832 (1028)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHH---HHHHHHTTTTHHHHHHGGG--CCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHH---HHHHHHHHHHHHHHHHhcc--Ccc
Confidence 99999999999999999999999999999998765433211111111223443 2233333333445555543 444
Q ss_pred cccccCCCCCCCCC-Cccccc
Q 002354 906 QKASFQAPSSRVNS-NVDSHQ 925 (932)
Q Consensus 906 ~~~~~k~~~~~~~~-~~~~~~ 925 (932)
.++++++||++.+. ..++..
T Consensus 833 ~~~~m~~~Pr~~~~~~l~~~~ 853 (1028)
T 2zxe_A 833 ESDIMKRQPRNPKTDKLVNER 853 (1028)
T ss_dssp SSCGGGSCCCCTTTCCSSCHH
T ss_pred chhhhccCCCCcccccccCHH
Confidence 56678888876444 555544
No 6
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=3.9e-81 Score=791.64 Aligned_cols=582 Identities=20% Similarity=0.254 Sum_probs=472.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEE
Q 002354 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (932)
Q Consensus 325 yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgv 404 (932)
++..++++++++++...+..++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||+
T Consensus 139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRd----G~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ 214 (1034)
T 3ixz_A 139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRD----GDKFQINADQLVVGDLVEMKGGDRVPADIR 214 (1034)
T ss_pred chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCCCCcEEEEcCCceecCCeE
Confidence 4445667777788888889999999999999999999999999987 689999999999999999999999999999
Q ss_pred EEeee-eEEeccccccCCCceeecCC----------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChH
Q 002354 405 VRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (932)
Q Consensus 405 ll~G~-~~VDES~LTGES~Pv~K~~g----------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~l 473 (932)
|++|. +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+
T Consensus 215 ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl 294 (1034)
T 3ixz_A 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPI 294 (1034)
T ss_pred EEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcH
Confidence 99986 68999999999999999875 34899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhh
Q 002354 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGAT 553 (932)
Q Consensus 474 q~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~ 553 (932)
|+.++++..++.++++++++++|++|++.+ .+|..++..++++++++|||+|+++++++++.+..++++
T Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak 363 (1034)
T 3ixz_A 295 AIEIEHFVDIIAGLAILFGATFFIVAMCIG-----------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLAS 363 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhh
Confidence 999999999999988888888887776543 356788999999999999999999999999999999999
Q ss_pred cCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCC----CCCCC--HHHHHHHHHHhcc---
Q 002354 554 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHPLS--ETEILKFAAGVES--- 624 (932)
Q Consensus 554 ~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~----~~~~~--~~~ll~laa~~e~--- 624 (932)
+|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+........ .+..+ ..+++..++.+..
T Consensus 364 ~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~ 443 (1034)
T 3ixz_A 364 KNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAF 443 (1034)
T ss_pred CCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhcccee
Confidence 99999999999999999999999999999999999999887654433211111 01111 1233333332211
Q ss_pred -------------cCCCcHHHHHHHHHHhcCCccccc--cCCCeEEe---cCCee--EE-EEc----C--eEEEeecHHH
Q 002354 625 -------------NTVHPIGKAIVEAAEFSNCQNVKV--ADGTFIEE---PGSGT--VA-IIE----D--RKVSVGTIDW 677 (932)
Q Consensus 625 -------------~s~hPi~~Ai~~~a~~~~~~~~~~--~~~~~~~~---~g~g~--~~-~i~----~--~~~~~Gs~~~ 677 (932)
...+|.+.|++++++..+...... +.....+. ..+.. .. ... + ..++||+++.
T Consensus 444 ~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~ 523 (1034)
T 3ixz_A 444 KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPER 523 (1034)
T ss_pred ccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHH
Confidence 124789999999887654321111 11111222 22221 11 111 2 2488999999
Q ss_pred HhhcCCCCc------hh---------hhHHHHHhCCCeEEEEE------------------------ECCEEEEEEEecc
Q 002354 678 LRSHGVDTS------TF---------QEVEMEDLMNQSLVYVG------------------------VDNMLAGLIYVED 718 (932)
Q Consensus 678 i~~~~~~~~------~~---------~~~~~~~~~g~~~~~va------------------------~~~~~lG~i~l~D 718 (932)
+.+.|.... +. +....+..+|.+++.++ .|++|+|+++++|
T Consensus 524 il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~D 603 (1034)
T 3ixz_A 524 VLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMID 603 (1034)
T ss_pred HHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccC
Confidence 998885311 00 01122445677776654 3568999999999
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 761 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 761 (932)
++|++++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 9999999999999999999999999999999999999999421
Q ss_pred --------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEec-CchHHHHhhcCEEEeCC
Q 002354 762 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGN 826 (932)
Q Consensus 762 --------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~-~~~~~a~~~ad~vl~~~ 826 (932)
.+++|++|++|.++++.+|+.|+.|+|+|||.||++||++||+||||| +|++.+|++||+|+.+|
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~ 763 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDD 763 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccC
Confidence 389999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHhhhhHHHHHHHhhhhcccccccc
Q 002354 827 RLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQ 906 (932)
Q Consensus 827 ~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~lnsl~l~~~~~~~~ 906 (932)
+++++.+++++||++++||++++.|.+++|+..+...+.. .++| ...|+.+..++++..+...+-++.|.+. +..
T Consensus 764 ~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qiL~inl~~d~~palal~~e--~~~ 838 (1034)
T 3ixz_A 764 NFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIY--ITVS-VPLPLGCITILFIELCTDIFPSVSLAYE--KAE 838 (1034)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-hhhhHHHHHHHHHHHHHHHHHHHHhhcC--CCC
Confidence 9999999999999999999999999999999766443321 1233 2357777788888888888888887654 456
Q ss_pred ccccCCCCCCC-CCCcccccc
Q 002354 907 KASFQAPSSRV-NSNVDSHQL 926 (932)
Q Consensus 907 ~~~~k~~~~~~-~~~~~~~~~ 926 (932)
++++++||++. +....++.|
T Consensus 839 ~~~m~~~Pr~~~~~~l~~~~~ 859 (1034)
T 3ixz_A 839 SDIMHLRPRNPKRDRLVNEPL 859 (1034)
T ss_pred hhhhhCCCCCCccccccCHHH
Confidence 66788888765 566666554
No 7
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1e-80 Score=786.71 Aligned_cols=586 Identities=19% Similarity=0.253 Sum_probs=456.5
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCc-EEEEeCCCccCCCEEEEcCCCEEee
Q 002354 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDS-IIEVPCNSLHVGDHIVVLPGDRIPA 401 (932)
Q Consensus 323 ~~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~-~~~V~~~~Lv~GDiV~v~~Ge~IPa 401 (932)
..|++. +++++++++...++.++++|+++++++|+++.|.+++|+|++ ++ +++|++++|+|||+|.|++||+|||
T Consensus 87 ~~~~~~-~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g---~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 87 TAFVEP-FVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRAD---RKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SSSHHH-HHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTT---CSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred hhHHHh-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCC---CceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 456655 445556677778888888899999999999999999999863 23 5899999999999999999999999
Q ss_pred eEEEEee---eeEEeccccccCCCceeecCC-------------CccccceeeecCcEEEEEEecCCcchHHHHHHHHHH
Q 002354 402 DGVVRAG---RSTVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEE 465 (932)
Q Consensus 402 Dgvll~G---~~~VDES~LTGES~Pv~K~~g-------------~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 465 (932)
||+|+++ .+.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 9999764 469999999999999999987 589999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCcccchhccCCcH----HHHHHHHHHHHHHHhhhcchhhHH
Q 002354 466 AQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV----SLALQLSCSVLVVACPCALGLATP 541 (932)
Q Consensus 466 a~~~~~~lq~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~----~~~l~~ai~vLvva~P~aL~la~p 541 (932)
++.+++|+|+.+|+++.+++++++++++++|++|....... ..+.+| ...+..++++++++|||+|++++|
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt 317 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP-----VHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVIT 317 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC-----SSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cccchHHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 99999999999999999999998888887776654211100 011122 345668899999999999999999
Q ss_pred HHHHHHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCC----------CCCCCCCCCC--
Q 002354 542 TAMLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD----------PNSKQNPIHP-- 609 (932)
Q Consensus 542 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~----------~~~~~~~~~~-- 609 (932)
++++.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++ .....++...
T Consensus 318 ~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 397 (995)
T 3ar4_A 318 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVL 397 (995)
T ss_dssp HHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEE
T ss_pred HHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccc
Confidence 9999999999999999999999999999999999999999999999999986431111 0000011100
Q ss_pred --------CCHHHHHHH--HHHhcc--------------cCCCcHHHHHHHHHHhcCC-ccc--c--c------------
Q 002354 610 --------LSETEILKF--AAGVES--------------NTVHPIGKAIVEAAEFSNC-QNV--K--V------------ 648 (932)
Q Consensus 610 --------~~~~~ll~l--aa~~e~--------------~s~hPi~~Ai~~~a~~~~~-~~~--~--~------------ 648 (932)
.....+..+ +.++++ ...+|.+.|++.+++..+. ... . .
T Consensus 398 ~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~ 477 (995)
T 3ar4_A 398 KNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIR 477 (995)
T ss_dssp ETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhh
Confidence 001122222 222221 1268999999998877654 100 0 0
Q ss_pred ----cCCCeEEecCCeeEEEE----c-------CeEEEeecHHHHhhcCCCCc---------h------hhhHHHH--Hh
Q 002354 649 ----ADGTFIEEPGSGTVAII----E-------DRKVSVGTIDWLRSHGVDTS---------T------FQEVEME--DL 696 (932)
Q Consensus 649 ----~~~~~~~~~g~g~~~~i----~-------~~~~~~Gs~~~i~~~~~~~~---------~------~~~~~~~--~~ 696 (932)
....+.+...+..+..+ + ...++||+++.+.+.|.... . .+..+.+ +.
T Consensus 478 ~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 557 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557 (995)
T ss_dssp HHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHST
T ss_pred hhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhh
Confidence 00012223333333222 2 24589999999998874321 0 0112234 56
Q ss_pred CCCeEEEEEE-----------------------CCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002354 697 MNQSLVYVGV-----------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 753 (932)
Q Consensus 697 ~g~~~~~va~-----------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia 753 (932)
+|.+++.+++ |++++|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|
T Consensus 558 ~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia 637 (995)
T 3ar4_A 558 DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC 637 (995)
T ss_dssp TCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred ccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH
Confidence 7999998874 45799999999999999999999999999999999999999999999
Q ss_pred HHcCCCCC-----------------------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe
Q 002354 754 SLVGIPKD-----------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHI 804 (932)
Q Consensus 754 ~~~gi~~~-----------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v 804 (932)
+++||... .+|+|++|++|.++|+.+|++|+.|+|+|||.||++||++||+
T Consensus 638 ~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 638 RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTE
T ss_pred HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCe
Confidence 99999642 3899999999999999999999999999999999999999999
Q ss_pred eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccc--cccHHHHH
Q 002354 805 GVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGT--MLTPSIAG 881 (932)
Q Consensus 805 gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i~i~la~-~~~~~~~g~--~l~P~~aa 881 (932)
|||||+|++.++++||+++.++++..+.+++++||++++||+||+.|++++|+..+...+ +.+ +|. .++|+
T Consensus 718 giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~---~g~~~pl~~~--- 791 (995)
T 3ar4_A 718 GIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA---LGLPEALIPV--- 791 (995)
T ss_dssp EEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCSSCHH---
T ss_pred EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcchHHHH---
Confidence 999999999999999999999999999999999999999999999999999985432221 111 231 24454
Q ss_pred HHhhhhHHHHHHHhhhhccccccccccccCCCCCCCCCCccccc
Q 002354 882 ALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 925 (932)
Q Consensus 882 ~~m~~ssl~v~lnsl~l~~~~~~~~~~~~k~~~~~~~~~~~~~~ 925 (932)
.+..+.-+...+.++.|.+. ++..+++++||++.+.+.++..
T Consensus 792 qil~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~~~~~~l~~~~ 833 (995)
T 3ar4_A 792 QLLWVNLVTDGLPATALGFN--PPDLDIMDRPPRSPKEPLISGW 833 (995)
T ss_dssp HHHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCCCTTCCSSCHH
T ss_pred HHHHHHHHHHHHHHHhhccC--CCChhHHhCCCCCCcccccCHH
Confidence 34444445555666666544 3345678888887777666654
No 8
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-85 Score=811.31 Aligned_cols=508 Identities=23% Similarity=0.308 Sum_probs=424.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeE
Q 002354 324 AFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (932)
Q Consensus 324 ~yf~~~~~il~~~llg~~le~~~~~ka~~~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDg 403 (932)
.|++ +++++++++++.+++.++++|+++++++|+++.|.+++|+|+ |++++|++++|+|||+|.|++||+|||||
T Consensus 92 ~~~~-~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~Rd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 166 (885)
T 3b8c_A 92 DWQD-FVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRD----GKWSEQEAAILVPGDIVSIKLGDIIPADA 166 (885)
T ss_dssp CCTT-HHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCS----SCSCCCCTTTTCTTSBCCCCSSCCCSSCC
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeece
Confidence 3444 456777788899999999999999999999999999999986 57889999999999999999999999999
Q ss_pred EEEeeee-EEeccccccCCCceeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhhcCCChHHHHHHHHHh
Q 002354 404 VVRAGRS-TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSG 482 (932)
Q Consensus 404 vll~G~~-~VDES~LTGES~Pv~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~~~~~~lq~~~d~~~~ 482 (932)
+|++|+. .||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+|+|.+++++ +.+++|+|+.+++++.
T Consensus 167 ~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~ 245 (885)
T 3b8c_A 167 RLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGN 245 (885)
T ss_dssp CCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHH
T ss_pred EEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHH
Confidence 9999985 8999999999999999999999999999999999999999999999999998877 6789999999999988
Q ss_pred hHHHHH-HHHHHHHHHHHHhhccCcccchhccCCcHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcCccccCc
Q 002354 483 HFTYGV-IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATRGLLLRGG 561 (932)
Q Consensus 483 ~~~~~v-l~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vLvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~ 561 (932)
++++.+ +.+++++++.|++. +.+|..++.+++++++++|||+|++++|++++.+..+++++|+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~ 314 (885)
T 3b8c_A 246 FCICSIAIGMVIEIIVMYPIQ-----------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRM 314 (885)
T ss_dssp HHHHHHHHHHHHHSTTTTTTT-----------CSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----------cCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCc
Confidence 754433 32333333333221 224556788999999999999999999999999999999999999999
Q ss_pred hHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc-CCCcHHHHHHHHHHh
Q 002354 562 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN-TVHPIGKAIVEAAEF 640 (932)
Q Consensus 562 ~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~-s~hPi~~Ai~~~a~~ 640 (932)
+++|+||++|+||||||||||+|+|+|.+.... .+ ..++++++++.+++.++.. +.||+++|+++++..
T Consensus 315 ~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~--------~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~ 384 (885)
T 3b8c_A 315 TAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF--------CKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLAD 384 (885)
T ss_dssp GGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS--------CSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCC
T ss_pred hHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc--------CCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhc
Confidence 999999999999999999999999999743210 00 1235677888888888864 899999999988753
Q ss_pred cCC---ccccccCCCeEEecCCe-eEEE-EcCe--EEEeecHHHHhhcCCCCc-----hhhhHHHHHhCCCeEEEEEEC-
Q 002354 641 SNC---QNVKVADGTFIEEPGSG-TVAI-IEDR--KVSVGTIDWLRSHGVDTS-----TFQEVEMEDLMNQSLVYVGVD- 707 (932)
Q Consensus 641 ~~~---~~~~~~~~~~~~~~g~g-~~~~-i~~~--~~~~Gs~~~i~~~~~~~~-----~~~~~~~~~~~g~~~~~va~~- 707 (932)
... .........|.....+. +... .+++ .++||+++.+.+.|.... ..+..+.++.+|.++++++++
T Consensus 385 ~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~ 464 (885)
T 3b8c_A 385 PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQV 464 (885)
T ss_dssp TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBC
T ss_pred hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEec
Confidence 110 00001111111111111 0000 1333 477999999998875211 112234456789999999874
Q ss_pred ------------CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------
Q 002354 708 ------------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------- 761 (932)
Q Consensus 708 ------------~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------- 761 (932)
++++|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||..+
T Consensus 465 ~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~ 544 (885)
T 3b8c_A 465 VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544 (885)
T ss_dssp CCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGT
T ss_pred cccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeecccccc
Confidence 589999999999999999999999999999999999999999999999999521
Q ss_pred --------------ceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC
Q 002354 762 --------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827 (932)
Q Consensus 762 --------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~ 827 (932)
.+|++++|+||.++|+.+|++|+.|+|+|||.||+|||++||+|||||+|+|.++++||+|+.+++
T Consensus 545 ~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~ 624 (885)
T 3b8c_A 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 624 (885)
T ss_dssp TSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCS
T ss_pred ccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCc
Confidence 279999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 828 LSQLLVALELSRLTMKTVKQNLWWAFGYNIV 858 (932)
Q Consensus 828 ~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~i 858 (932)
++.|.+++++||++++|||||+.|++++|+.
T Consensus 625 ~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~ 655 (885)
T 3b8c_A 625 LSVIISAVLTSRAIFQRMKNYTIYAVSITIR 655 (885)
T ss_dssp HHHHTHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999984
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=100.00 E-value=6e-40 Score=354.59 Aligned_cols=260 Identities=31% Similarity=0.498 Sum_probs=237.1
Q ss_pred HHHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhccc
Q 002354 546 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESN 625 (932)
Q Consensus 546 ~~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~ 625 (932)
.++.+++++||++|+++++|.++++++||||||||||+|+|.|.++. ++++++.+++++|..
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------------------~~~~~l~~~~~~e~~ 65 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------------------GDSLSLAYAASVEAL 65 (263)
Confidence 46788999999999999999999999999999999999999998774 235688999999999
Q ss_pred CCCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEE
Q 002354 626 TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVG 705 (932)
Q Consensus 626 s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va 705 (932)
|.||+++|+.++++..+... ...+.+...+|.|+...+++..+.+|+++ ++.+ ++++
T Consensus 66 s~hp~a~ai~~~~~~~g~~~--~~~~~~~~~~G~g~~~~~~~~~~~~G~~~--------------------~~~~-~~~~ 122 (263)
T 2yj3_A 66 SSHPIAKAIVKYAKEQGVKI--LEVKDFKEISGIGVRGKISDKIIEVKKAE--------------------NNND-IAVY 122 (263)
Confidence 99999999999987766542 23456788899999999988888888754 1334 6778
Q ss_pred ECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCE
Q 002354 706 VDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 706 ~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~ 785 (932)
.+..+.|.+.+.|+++|++.++|+.|+++|++++|+|||+...+..+++++|+. .+|..+.|++|...++.++..++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~p~~k~~~~~~l~~~~~~ 200 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ--EYYSNLSPEDKVRIIEKLKQNGNK 200 (263)
Confidence 889999999999999999999999999999999999999999999999999997 788999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 848 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~n 848 (932)
|+||||+.||++|++.||+|+++|++++.+++.+|++++++++..++++++++|+++++||||
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999999999999999999999999999999999999999998
No 10
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=100.00 E-value=6.2e-32 Score=292.66 Aligned_cols=276 Identities=35% Similarity=0.531 Sum_probs=237.1
Q ss_pred ccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHH
Q 002354 558 LRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEA 637 (932)
Q Consensus 558 vk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~ 637 (932)
+|+++++|.+++++.|+||++||||.|+++|.++... ++ ++.+++.+++.++..+.||+..++.+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~-------------~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~ 66 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGF-------------NH-SEDELLQIAASLEARSEHPIAAAIVEE 66 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEES-------------SS-CHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEec-------------CC-CHHHHHHHHHHhhccCCCHHHHHHHHH
Confidence 5889999999999999999999999999999999886 33 678999999999999999999999999
Q ss_pred HHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCchhhhHHHHHhCCCeEEEEEECCEEEEEEEec
Q 002354 638 AEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVE 717 (932)
Q Consensus 638 a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~lG~i~l~ 717 (932)
++..+... .....+...++.|+...+++..+..|+.+++.+.+.... .........+...+++..++.++|.+.+.
T Consensus 67 ~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (280)
T 3skx_A 67 AEKRGFGL--TEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTD--ESVEKLKQQGKTVVFILKNGEVSGVIALA 142 (280)
T ss_dssp HHHTTCCC--CCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCC--TTHHHHHTTTCEEEEEEETTEEEEEEEEE
T ss_pred HHhcCCCC--CCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCch--HHHHHHHhCCCeEEEEEECCEEEEEEEec
Confidence 98877653 233567788999999999999999999999988776543 22233445678899999999999999999
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAA 797 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~ 797 (932)
|+++|++.++++.|++.|+++.++||++...+..+.+.+|+. .+|..+.|.+|...++.+.+.. .++||||+.||++
T Consensus 143 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~ 219 (280)
T 3skx_A 143 DRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD--DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAP 219 (280)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHH
T ss_pred CCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh--hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHH
Confidence 999999999999999999999999999999999999999997 7899999999999999998876 6799999999999
Q ss_pred HHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 798 ALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFG 854 (932)
Q Consensus 798 al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~ 854 (932)
|++.|++|++|+++.+..++.||+++..++++++.++++++|+++++++||+.|++.
T Consensus 220 ~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 220 ALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999875
No 11
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=100.00 E-value=8.1e-32 Score=294.69 Aligned_cols=277 Identities=36% Similarity=0.520 Sum_probs=234.2
Q ss_pred HHHHhhhcCccccCchHHHhcccccEEEecCCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccC
Q 002354 547 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNT 626 (932)
Q Consensus 547 ~~~~~a~~gilvk~~~~lE~lg~v~~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s 626 (932)
+..+++++||++|+++++|.++++++||||||||||.+++.+.+++.. .+ ++++++.+++++|..+
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~-------------~~-~~~~~l~~~~~~e~~s 74 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-------------NG-DERELLRLAAIAERRS 74 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEES-------------SS-CHHHHHHHHHHHTTTC
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeC-------------CC-CHHHHHHHHHHHhhcC
Confidence 567889999999999999999999999999999999999999998876 22 5788999999999999
Q ss_pred CCcHHHHHHHHHHhcCCccccccCCCeEEecCCeeEEEEcCeEEEeecHHHHhhcCCCCc-hh-hhHHHHHhCCCeEEEE
Q 002354 627 VHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TF-QEVEMEDLMNQSLVYV 704 (932)
Q Consensus 627 ~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~Gs~~~i~~~~~~~~-~~-~~~~~~~~~g~~~~~v 704 (932)
.||+++++.+.++..+... ...+.+....|.|+.. ..+.+|+++++.+.+.... .. ...+.+...+.+++++
T Consensus 75 ~hp~~~a~~~~~~~~g~~~--~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 148 (287)
T 3a1c_A 75 EHPIAEAIVKKALEHGIEL--GEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIV 148 (287)
T ss_dssp CSHHHHHHHHHHHHTTCCC--CCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCc--cccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhCCCeEEEE
Confidence 9999999999998877653 2335677888998876 5577798888776665431 11 1223345578899999
Q ss_pred EECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCC
Q 002354 705 GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN 784 (932)
Q Consensus 705 a~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~ 784 (932)
+.|+.+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+. .+|..+.|+.|...++.++.. .
T Consensus 149 ~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~~K~~~~~~l~~~-~ 225 (287)
T 3a1c_A 149 ARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQAK-E 225 (287)
T ss_dssp EETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCTTCHHHHHHHHTTT-C
T ss_pred EECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--eeeeecChHHHHHHHHHHhcC-C
Confidence 9999999999999999999999999999999999999999999999999999997 788899999999999999888 8
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 002354 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 846 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 846 (932)
.++||||+.||++|++.|+++++++++.+..++.+|+++.++++..+.++++.+|+++++||
T Consensus 226 ~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 226 VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998777777889999988899999999999999999986
No 12
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.94 E-value=2.8e-27 Score=219.72 Aligned_cols=111 Identities=43% Similarity=0.703 Sum_probs=106.3
Q ss_pred HHHhhhccCCCeEEEEEecCCCCcEEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCceeecCCCcc
Q 002354 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (932)
Q Consensus 353 ~l~~L~~~~p~~~~vir~~~~~g~~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~Pv~K~~g~~V 432 (932)
++++|+++.|..++|+|+ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.+
T Consensus 2 al~~L~~l~p~~a~v~r~----g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~~v 77 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRD----GKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEV 77 (113)
T ss_dssp HHHHHHHHSCSEEEEEET----TEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEE
T ss_pred HHHHHhcCCCCEEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCCEE
Confidence 467788889999999986 5899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCcEEEEEEecCCcchHHHHHHHHHHhh
Q 002354 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (932)
Q Consensus 433 ~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~ 467 (932)
|+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 78 ~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 78 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999875
No 13
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.93 E-value=6.9e-27 Score=220.99 Aligned_cols=120 Identities=38% Similarity=0.591 Sum_probs=108.4
Q ss_pred HHHhHHHHHhhhccCCCeEEEEEecCCCCc---EEEEeCCCccCCCEEEEcCCCEEeeeEEEEeeeeEEeccccccCCCc
Q 002354 347 KIKATSDMTGLLGILPSKARLLVDNDAKDS---IIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLP 423 (932)
Q Consensus 347 ~~ka~~~l~~L~~~~p~~~~vir~~~~~g~---~~~V~~~~Lv~GDiV~v~~Ge~IPaDgvll~G~~~VDES~LTGES~P 423 (932)
++|+.+++++|+++.|.+++|+|++. +++ +++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~-~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDS-DNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSS-STTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCC-CCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCcc
Confidence 46788999999999999999998632 122 68899999999999999999999999999999999999999999999
Q ss_pred eeecCCCccccceeeecCcEEEEEEecCCcchHHHHHHHHHHhh
Q 002354 424 VTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQ 467 (932)
Q Consensus 424 v~K~~g~~V~aGt~v~~G~~~~~V~~tG~~T~~gki~~~v~~a~ 467 (932)
+.|.+|+.||+||+|.+|.++++|+++|.+|.+++|++++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999987753
No 14
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.84 E-value=7.3e-22 Score=216.76 Aligned_cols=120 Identities=15% Similarity=0.201 Sum_probs=107.7
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-------------------------ceecccChhh
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNE 771 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------~v~~~~~p~~ 771 (932)
.+++||++.++++.|+++|++++|+|||...+++++++++|+... ..+++..|.+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 478999999999999999999999999999999999999998642 1234456778
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHH---HHhCCeeEEec-------CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAA---LASSHIGVAMG-------GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~a---l~~A~vgIa~~-------~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|...+..++++++.|+|+|||+||+|| |+.||+||+|| ++++.+++++|+||++|++..++.+|-
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 888899999999999999999999999 55999999999 799999999999999999999998764
No 15
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.62 E-value=4.7e-16 Score=158.78 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=116.2
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CC
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----EN 784 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~ 784 (932)
..+..+.+.|.+ +|+.|+++|+++.++||++...+..+++++|+. .+|... ..|.+.++.+.++ .+
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~--~~f~~~--~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE--HLFQGR--EDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS--EEECSC--SCHHHHHHHHHHHHTCCGG
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH--HHhcCc--CChHHHHHHHHHHcCCChh
Confidence 344445444433 999999999999999999999999999999997 677665 6677777766553 56
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 785 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVKQNLWWAFGYNI 857 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~~nl~~a~~~N~ 857 (932)
.++||||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|.++++|+||+.|++.||-
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred HEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence 8999999999999999999999999999999999999998764 677888888999999999999999999983
No 16
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=99.59 E-value=6.3e-15 Score=144.41 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=100.4
Q ss_pred CCCCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccc-----cC
Q 002354 577 KTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKV-----AD 650 (932)
Q Consensus 577 KTGTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~-----~~ 650 (932)
..||+|.|+++++++.+. +++++++++++++++|..|+||+++||++++++. ++..... +.
T Consensus 13 ~~~tit~gnr~vt~v~~~-------------~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~ 79 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPA-------------QGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATF 79 (156)
T ss_dssp --------CEEEEEEEEC-------------TTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEE
T ss_pred CCCceecCCCeEEEEEec-------------CCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcccccccccce
Confidence 479999999999999876 5678899999999999999999999999999987 6653222 11
Q ss_pred CCeEEecC-CeeEEEEcCeEEEeec----HHHHhhcCCCCc-hh-hhHHHHHhCCCeEEEEEECCEEEEEEEecccccH
Q 002354 651 GTFIEEPG-SGTVAIIEDRKVSVGT----IDWLRSHGVDTS-TF-QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRD 722 (932)
Q Consensus 651 ~~~~~~~g-~g~~~~i~~~~~~~Gs----~~~i~~~~~~~~-~~-~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~lr~ 722 (932)
.+|...+| +|+ .++++.+.+|+ .+|+.+.++... .. +..+..+.+|.++++++.|++++|+|.+.|++||
T Consensus 80 ~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 80 VPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG 156 (156)
T ss_dssp EEEETTTTEEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECCCC
T ss_pred eeccccCCCCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCCCC
Confidence 45777888 898 56999999999 568887777654 22 2334456789999999999999999999999986
No 17
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=99.57 E-value=4.4e-14 Score=142.75 Aligned_cols=130 Identities=26% Similarity=0.386 Sum_probs=105.3
Q ss_pred CCcccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccccCCCeEEec
Q 002354 579 GTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEP 657 (932)
Q Consensus 579 GTLT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~~~~~~~~~~ 657 (932)
||||+|+|+|.++..... ...+++++++.+++++|.+|+||+++||+++++.. +... .....+|+..+
T Consensus 1 GTLT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~ 69 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTE----------SNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTET-LGTCIDFQVVP 69 (185)
T ss_dssp CCCCSCCCEEEEEEECSC----------TTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTCSC-CCCCBCCEEET
T ss_pred CCCcCCcEEEEEEEecCC----------cCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCCCC-CCCccceEEec
Confidence 899999999999986510 02357889999999999999999999999999764 4321 12346899999
Q ss_pred CCeeEEEEcC----------------------------------------------------eEEEeecHHHHhhcCCCC
Q 002354 658 GSGTVAIIED----------------------------------------------------RKVSVGTIDWLRSHGVDT 685 (932)
Q Consensus 658 g~g~~~~i~~----------------------------------------------------~~~~~Gs~~~i~~~~~~~ 685 (932)
|+|+.+++++ +++.+|+++||.++++..
T Consensus 70 G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i 149 (185)
T 2kmv_A 70 GCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVI 149 (185)
T ss_dssp TTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCC
T ss_pred cceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCC
Confidence 9999999988 689999999999988765
Q ss_pred chh--hhHHHHHhCCCeEEEEEECCEEEEEEEeccc
Q 002354 686 STF--QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR 719 (932)
Q Consensus 686 ~~~--~~~~~~~~~g~~~~~va~~~~~lG~i~l~D~ 719 (932)
... ......+.+|.+.++++.|++++|+|.+.|+
T Consensus 150 ~~~~~~~~~~~~~~G~T~V~vaidg~l~g~iavaD~ 185 (185)
T 2kmv_A 150 NNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT 185 (185)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEEcC
Confidence 422 2223445679999999999999999999995
No 18
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.44 E-value=9.2e-14 Score=154.79 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=110.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHH----
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFIN---- 777 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~---- 777 (932)
++.|++.+.++.|++.|+++.|+||+....+..+.+++|+. .++.. ..+..|.+.++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD--YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC--eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 68899999999999999999999999999999999999996 33332 12234555444
Q ss_pred HHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002354 778 ELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYN 856 (932)
Q Consensus 778 ~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl~~a~~~N 856 (932)
.+.-....++||||+.||++|++.|++|++| ++.+.+++.||+++..+++.++.++++......+++++|+.|++.||
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred HcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 4444457899999999999999999999999 89999999999999999999999999999888899999999999998
No 19
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=99.43 E-value=1.3e-12 Score=130.03 Aligned_cols=127 Identities=23% Similarity=0.403 Sum_probs=100.5
Q ss_pred cccCceEEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHhcccCCCcHHHHHHHHHHhc-CCccccccCCCeEEecCC
Q 002354 581 LTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS-NCQNVKVADGTFIEEPGS 659 (932)
Q Consensus 581 LT~g~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~laa~~e~~s~hPi~~Ai~~~a~~~-~~~~~~~~~~~~~~~~g~ 659 (932)
||+|+|+|.++..... ...++++++|.+++++|.+|+||+++||+++++.. +... .....+|+.++|+
T Consensus 1 LT~G~p~V~~v~~~~~----------~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~~~-~~~~~~f~~i~G~ 69 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGD----------VATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTET-LGYCTDFQAVPGC 69 (165)
T ss_dssp CCCCCCCEEEEEECCC----------TTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTCCC-CCCEEEEEEETTT
T ss_pred CCCceeEEEEEEeeCC----------cCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCCCC-CCCcCceEEecCc
Confidence 8999999999876510 01256789999999999999999999999999765 4321 1123679999999
Q ss_pred eeEEEEcCe-----------------------------------EEEeecHHHHhhcCCCCchh--hhHHHHHhCCCeEE
Q 002354 660 GTVAIIEDR-----------------------------------KVSVGTIDWLRSHGVDTSTF--QEVEMEDLMNQSLV 702 (932)
Q Consensus 660 g~~~~i~~~-----------------------------------~~~~Gs~~~i~~~~~~~~~~--~~~~~~~~~g~~~~ 702 (932)
|+.+.+++. .|.+|+++||.++++..... ......+.+|.+++
T Consensus 70 Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v 149 (165)
T 2arf_A 70 GIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAI 149 (165)
T ss_dssp EEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEE
T ss_pred cEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEE
Confidence 999999886 89999999999877654321 12223445788999
Q ss_pred EEEECCEEEEEEEecc
Q 002354 703 YVGVDNMLAGLIYVED 718 (932)
Q Consensus 703 ~va~~~~~lG~i~l~D 718 (932)
|+++|++++|+|.+.|
T Consensus 150 ~va~dg~~~g~i~l~D 165 (165)
T 2arf_A 150 LVAIDGVLCGMIAIAD 165 (165)
T ss_dssp EEEETTEEEEEEEECC
T ss_pred EEEECCEEEEEEEEEC
Confidence 9999999999999987
No 20
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.41 E-value=7.5e-13 Score=133.74 Aligned_cols=153 Identities=16% Similarity=0.115 Sum_probs=119.8
Q ss_pred CeEEEEEECCEEEE-EEEec------ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhh
Q 002354 699 QSLVYVGVDNMLAG-LIYVE------DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 771 (932)
Q Consensus 699 ~~~~~va~~~~~lG-~i~l~------D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~ 771 (932)
...+++..|++++- -..+. ..+.+++.++|++|+++|++++++||++...+..+++++|+. .++.... .
T Consensus 8 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~~~k--~ 83 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--E 83 (180)
T ss_dssp CCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--C
T ss_pred CeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeecCCC--C
Confidence 45677777776542 11221 146778899999999999999999999999999999999997 5665544 4
Q ss_pred HHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH---HHHHHHH
Q 002354 772 KKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE---LSRLTMK 843 (932)
Q Consensus 772 K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~---~gR~~~~ 843 (932)
|...++.+.+ ..+.++||||+.||++|++.|+++++++++.+.+++.||+++.+++..++. ++++ ..|..++
T Consensus 84 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~ 163 (180)
T 1k1e_A 84 KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSS 163 (180)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTH
T ss_pred cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchh
Confidence 5555554433 236799999999999999999999999999999999999999988766666 4443 4666788
Q ss_pred HHHHHHHHHHHH
Q 002354 844 TVKQNLWWAFGY 855 (932)
Q Consensus 844 ~i~~nl~~a~~~ 855 (932)
+++.++.|+..-
T Consensus 164 ~~~~~~~~~~~~ 175 (180)
T 1k1e_A 164 VFDTAQGFLKSV 175 (180)
T ss_dssp HHHCHHHHHHHG
T ss_pred hhhhccchhhhh
Confidence 888888887764
No 21
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.30 E-value=2e-12 Score=132.13 Aligned_cols=153 Identities=15% Similarity=0.147 Sum_probs=117.1
Q ss_pred CCCeEEEEEECCEEEEEEEecccccHHHHH-------HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccC-
Q 002354 697 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAH-------VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK- 768 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~i~l~D~lr~~~~~-------~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~- 768 (932)
.+.+.+++..|+++..-....++..++..+ +|+.|+++|+++.++||++...+..+++.+|++ .++....
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~--~~~~~~kp 94 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT--HYYKGQVD 94 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC--EEECSCSS
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc--cceeCCCC
Confidence 356778888888765411111111122222 599999999999999999999999999999997 6777663
Q ss_pred -hhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhH----HHHHHHHHHHHHH
Q 002354 769 -PNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ----LLVALELSRLTMK 843 (932)
Q Consensus 769 -p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~~gR~~~~ 843 (932)
|+-...+++.+.-....++||||+.||++|++.|+++++++++.+.+++.||+++.+++..+ +.+.+...|..+.
T Consensus 95 k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~ 174 (191)
T 3n1u_A 95 KRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAE 174 (191)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHH
Confidence 44445566666656678999999999999999999999999999999999999999887444 5556666777777
Q ss_pred HHHHHHHH
Q 002354 844 TVKQNLWW 851 (932)
Q Consensus 844 ~i~~nl~~ 851 (932)
++.+++..
T Consensus 175 ~~~~~~~~ 182 (191)
T 3n1u_A 175 LAITGYLK 182 (191)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77776654
No 22
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.30 E-value=1.5e-12 Score=133.38 Aligned_cols=131 Identities=15% Similarity=0.212 Sum_probs=103.1
Q ss_pred CCCeEEEEEECCEEEEEEEecccccHHHHH-------HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh
Q 002354 697 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAH-------VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769 (932)
Q Consensus 697 ~g~~~~~va~~~~~lG~i~l~D~lr~~~~~-------~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p 769 (932)
.+.+.+++..|++++.--...++.+++..+ .|+.|+++|+++.++||++...+..+++++|+. .+|....
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~~~k- 99 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQGQD- 99 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEECSCS-
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEeeCCC-
Confidence 456788888888766411111222233333 499999999999999999999999999999997 6776664
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 770 NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 770 ~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
.|...++.+.+ ....++||||+.||++|++.|+++++|+++.+.+++.||+|+.+++-.++
T Consensus 100 -~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 100 -DKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp -SHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTH
T ss_pred -CcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCH
Confidence 45555554433 35689999999999999999999999999999999999999998876664
No 23
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.28 E-value=6.3e-12 Score=107.05 Aligned_cols=70 Identities=29% Similarity=0.350 Sum_probs=64.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+.+|.|+||+|++|+.+||++|++++||.+++||+.++++.|.|++...+. +.+.++|+++||++.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKE--------EDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEEcc
Confidence 4678999999999999999999999999999999999999999999877665 789999999999987654
No 24
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.27 E-value=3.7e-12 Score=127.13 Aligned_cols=115 Identities=15% Similarity=0.106 Sum_probs=93.2
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCCCceecccChhhHHHHHHHHhhC----
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS--LVGIPKDKVLSGVKPNEKKRFINELQND---- 782 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~--~~gi~~~~v~~~~~p~~K~~~v~~l~~~---- 782 (932)
+.++.+.++|. .+|+.|+++|+++.|+||+ ..+..+++ .+|++ ++.. +++|...++.+.++
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~~g--~~~K~~~l~~~~~~~gi~ 98 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TEVS--VSDKLATVDEWRKEMGLC 98 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EECS--CSCHHHHHHHHHHHTTCC
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EEEC--CCChHHHHHHHHHHcCcC
Confidence 34555666665 3899999999999999999 67888899 67774 4543 46788888777653
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHH-HHHHH
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQL-LVALE 836 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i-~~~i~ 836 (932)
...++||||+.||++|++.|+++++|+++.+.+++.||+|+.+++-+++ .++++
T Consensus 99 ~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~ 153 (168)
T 3ewi_A 99 WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIREFAE 153 (168)
T ss_dssp GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHH
T ss_pred hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHH
Confidence 4579999999999999999999999999999999999999998877773 33443
No 25
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.27 E-value=6.9e-12 Score=131.69 Aligned_cols=134 Identities=17% Similarity=0.181 Sum_probs=111.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------cee-
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVL- 764 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------~v~- 764 (932)
..+++..|++++. -...+.+++.++|++|+++|++++++|||+...+..+++++|++.. .+.
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 4677777887764 2567899999999999999999999999999999999999998631 111
Q ss_pred c--------------------------------------------------------------ccCh--hhHHHHHHHHh
Q 002354 765 S--------------------------------------------------------------GVKP--NEKKRFINELQ 780 (932)
Q Consensus 765 ~--------------------------------------------------------------~~~p--~~K~~~v~~l~ 780 (932)
. ++.| .+|...++.+.
T Consensus 83 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 83 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp SSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 0 0113 46777777776
Q ss_pred hC----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 781 ND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 781 ~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++ ...++++||+.||.+|++.|++|++|+++.+.+++.||+++.+++.++|.++++
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 53 357999999999999999999999999999999999999999999999999876
No 26
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.25 E-value=1e-11 Score=125.00 Aligned_cols=103 Identities=20% Similarity=0.254 Sum_probs=89.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+++.+|++ ++... ..|.+.++.+.++ .+.++||||+.||++|++.|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 899999999999999999999999999999996 66655 5566666665543 46799999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
+++++++++.+.+++.||+++.+++..++...
T Consensus 122 g~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 122 GWPVAVASAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp SEEEECTTCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred CCeEECCChhHHHHHhCCEEecCCCCCcHHHH
Confidence 99999999999999999999998886655443
No 27
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.25 E-value=1.7e-11 Score=127.04 Aligned_cols=106 Identities=21% Similarity=0.207 Sum_probs=91.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+++++|+. .+|... ..|.+.++.+.++ .+.++||||+.||++|++.|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~--~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~a 159 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT--HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQV 159 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence 999999999999999999999999999999997 677766 5677777766553 67899999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALE 836 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~ 836 (932)
+++++++++.+.+++.||+|+.+++-.+ +.++++
T Consensus 160 g~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~ 194 (211)
T 3ij5_A 160 GLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCD 194 (211)
T ss_dssp SEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHH
Confidence 9999999999999999999998875544 444443
No 28
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.21 E-value=3.2e-11 Score=101.04 Aligned_cols=67 Identities=28% Similarity=0.511 Sum_probs=60.5
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
++++|.|+||+|++|+.+|+++|++++||.+++||+.++++.|.| +...++ +.+.++|+++||++.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~--------~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTP--------QILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCH--------HHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCH--------HHHHHHHHHcCCceEe
Confidence 357899999999999999999999999999999999999999999 455555 7899999999998753
No 29
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.14 E-value=6.2e-11 Score=100.81 Aligned_cols=67 Identities=24% Similarity=0.468 Sum_probs=61.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+.+|.|+||+|++|+.+||++|++ +||..++||+.++++.|.++ ++ +.+.++|+++||++.+..+
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~--------~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DV--------DKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GH--------HHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CH--------HHHHHHHHHcCCceEecCc
Confidence 56789999999999999999999999 99999999999999999988 33 7899999999999877653
No 30
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.11 E-value=1.2e-10 Score=97.55 Aligned_cols=65 Identities=26% Similarity=0.409 Sum_probs=58.0
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+.+|.| ||+|++|+.+||++|++++|| +++||+.++++.|.++. ++ +++.++|+++||++.+..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~---~~--------~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH---SM--------DTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS---CH--------HHHHHHHHTTCSCEEEEE
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCceEecC
Confidence 4678999 999999999999999999999 99999999999999742 33 789999999999987653
No 31
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.08 E-value=2.9e-10 Score=95.31 Aligned_cols=68 Identities=29% Similarity=0.482 Sum_probs=61.7
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSV--------QKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCH--------HHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCeEe
Confidence 4578999999999999999999999999999999999999999999876665 7899999999998754
No 32
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.08 E-value=4.2e-10 Score=111.31 Aligned_cols=106 Identities=22% Similarity=0.193 Sum_probs=89.9
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHH----HhhCCCEEEEEcCCcccHHHHHhC
Q 002354 727 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE----LQNDENVVAMVGDGINDAAALASS 802 (932)
Q Consensus 727 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~----l~~~g~~v~~vGDg~ND~~al~~A 802 (932)
+++.|+++|+++.++||++...+..+.+++|+. .++....| |...++. +.-..+.++||||+.||++|++.|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~~~~~kp--k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD--YLFQGVVD--KLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS--EEECSCSC--HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC--EeecccCC--hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 66666544 4444443 333456899999999999999999
Q ss_pred CeeEEecCchHHHHhhcCEEEeCCChhH-HHHHHH
Q 002354 803 HIGVAMGGGVGAASEVASVVLMGNRLSQ-LLVALE 836 (932)
Q Consensus 803 ~vgIa~~~~~~~a~~~ad~vl~~~~~~~-i~~~i~ 836 (932)
+++++++++.+..++.||+++.+++..+ +.++++
T Consensus 115 g~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 115 GIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp SEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred CCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 9999999999999999999999988776 655554
No 33
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.06 E-value=4.1e-10 Score=94.23 Aligned_cols=67 Identities=21% Similarity=0.379 Sum_probs=60.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
+.+..|.|+||+|++|+..|+++|++++||..+++|+.++++.|.|++...+. +.+.++++++||++
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTL--------KDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCH--------HHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999999766655 78999999999975
No 34
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.05 E-value=3.7e-10 Score=96.94 Aligned_cols=70 Identities=20% Similarity=0.396 Sum_probs=62.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..+..|.|+||+|++|++.|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHCCCEEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHCCCceEec
Confidence 45688999999999999999999999999999999999999999999866554 78999999999987543
No 35
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.05 E-value=4.8e-10 Score=99.48 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhc---Ccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSSLR 202 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~~~ 202 (932)
.++.|.|+||+|++|+++|+++|++++||.+++||+.++++.|.|++...+. +.+.++++++ ||++.+.
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~--------~~i~~~i~~~g~Ggy~~~~~ 74 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTP--------ESLRKAIEAVSPGLYRVSIT 74 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCT--------HHHHHHHHTTSTTTCEEECC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHhccCCCeEEEEe
Confidence 3578999999999999999999999999999999999999999999876665 7899999999 5998776
Q ss_pred cCC
Q 002354 203 DMG 205 (932)
Q Consensus 203 ~~~ 205 (932)
.+.
T Consensus 75 ~~~ 77 (90)
T 2g9o_A 75 SEV 77 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 553
No 36
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.05 E-value=4.6e-10 Score=95.18 Aligned_cols=68 Identities=21% Similarity=0.402 Sum_probs=61.8
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
++.|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTP--------KTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEee
Confidence 568999999999999999999999999999999999999999999876655 78999999999987654
No 37
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.04 E-value=3.8e-10 Score=121.62 Aligned_cols=136 Identities=20% Similarity=0.251 Sum_probs=104.2
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC---CC--------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP---KD-------------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~---~~-------------- 761 (932)
...+++..||+++- -...+.+.+.++|+++++.|++++++||++...+..+.+++|++ ..
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~ 81 (279)
T 4dw8_A 5 YKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWES 81 (279)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTT
T ss_pred ceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCC
Confidence 35677778888762 34578899999999999999999999999999999999999962 10
Q ss_pred ----------------------------cee------cc--------------------------------------cCh
Q 002354 762 ----------------------------KVL------SG--------------------------------------VKP 769 (932)
Q Consensus 762 ----------------------------~v~------~~--------------------------------------~~p 769 (932)
.++ .. ..+
T Consensus 82 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 4dw8_A 82 KEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDA 161 (279)
T ss_dssp CCEEEECCCCGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCH
T ss_pred CeEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCH
Confidence 000 00 011
Q ss_pred hhHHHHHHHHh----------------------------------h----CCCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 NEKKRFINELQ----------------------------------N----DENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~~K~~~v~~l~----------------------------------~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+...++.+.++ + ....+++|||+.||.+|++.|++|+||||+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na 241 (279)
T 4dw8_A 162 GKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNA 241 (279)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCC
Confidence 11111222221 1 123599999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
.+.+++.||+|+.+++-++|.++|+.
T Consensus 242 ~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 242 QEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred cHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 99999999999999999999999874
No 38
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.04 E-value=2.7e-10 Score=97.38 Aligned_cols=71 Identities=25% Similarity=0.363 Sum_probs=63.4
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
+.+..|.|+||+|++|+..|+++|.+++||.++++|+.++++.|.|++...+. +.+.++++++||++.+.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQP--------PMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCH--------HHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEECC
Confidence 45678999999999999999999999999999999999999999998766554 778999999999876544
No 39
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.03 E-value=5.3e-10 Score=97.56 Aligned_cols=71 Identities=21% Similarity=0.402 Sum_probs=63.7
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+.+||++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+..+
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISV--------EEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCH--------HHHHHHHHHTTCCEECSCC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEecCC
Confidence 4688999999999999999999999999999999999999999998866555 7899999999998766543
No 40
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=4.1e-10 Score=122.07 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=104.6
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--------------
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------- 761 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------- 761 (932)
......+++..||+++- =...+.+.+.++|++|+++|++++++||++...+..+.+++|++..
T Consensus 18 ~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~ 94 (285)
T 3pgv_A 18 QGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDG 94 (285)
T ss_dssp ---CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTS
T ss_pred cCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCC
Confidence 34567889999999874 3457899999999999999999999999999999999999987420
Q ss_pred -----------------c-----------eecc-------------------------------------------cChh
Q 002354 762 -----------------K-----------VLSG-------------------------------------------VKPN 770 (932)
Q Consensus 762 -----------------~-----------v~~~-------------------------------------------~~p~ 770 (932)
. ++.. ..++
T Consensus 95 ~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~ 174 (285)
T 3pgv_A 95 QQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHE 174 (285)
T ss_dssp CEEEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHH
T ss_pred CEEEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHH
Confidence 0 0000 0111
Q ss_pred hHHHHHHHHh----------------------------------h-C---CCEEEEEcCCcccHHHHHhCCeeEEecCch
Q 002354 771 EKKRFINELQ----------------------------------N-D---ENVVAMVGDGINDAAALASSHIGVAMGGGV 812 (932)
Q Consensus 771 ~K~~~v~~l~----------------------------------~-~---g~~v~~vGDg~ND~~al~~A~vgIa~~~~~ 812 (932)
...++.+.++ + . .+.+++|||+.||.+|++.|++||||+|+.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~ 254 (285)
T 3pgv_A 175 HLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAH 254 (285)
T ss_dssp HHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCC
Confidence 1112222221 1 1 246999999999999999999999999999
Q ss_pred HHHHhhcC--EEEeCCChhHHHHHHH
Q 002354 813 GAASEVAS--VVLMGNRLSQLLVALE 836 (932)
Q Consensus 813 ~~a~~~ad--~vl~~~~~~~i~~~i~ 836 (932)
+.+|+.|| .|+.+++-++|.++|+
T Consensus 255 ~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 255 QRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp HHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred HHHHHhCCCCEecccCCcchHHHHHH
Confidence 99999998 4777899999999886
No 41
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.03 E-value=7.5e-10 Score=119.99 Aligned_cols=136 Identities=17% Similarity=0.244 Sum_probs=106.4
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------- 761 (932)
...+++..||+++- -...+.+.+.++++++++.|++++++||++...+..+.+.+|++..
T Consensus 6 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 82 (290)
T 3dnp_A 6 KQLLALNIDGALLR---SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPF 82 (290)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCS
T ss_pred ceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEE
Confidence 35677778888763 2457899999999999999999999999999999999999997510
Q ss_pred ------------------------------ceec-cc-------------------------------------------
Q 002354 762 ------------------------------KVLS-GV------------------------------------------- 767 (932)
Q Consensus 762 ------------------------------~v~~-~~------------------------------------------- 767 (932)
..+. +.
T Consensus 83 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 162 (290)
T 3dnp_A 83 FEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIE 162 (290)
T ss_dssp EECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEE
T ss_pred EecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEE
Confidence 0000 00
Q ss_pred ---Chh---------------------------------hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEE
Q 002354 768 ---KPN---------------------------------EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 768 ---~p~---------------------------------~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa 807 (932)
.++ .|...++.+.++ ...+++|||+.||.+|++.|++|+|
T Consensus 163 ~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va 242 (290)
T 3dnp_A 163 VYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVA 242 (290)
T ss_dssp EECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEE
Confidence 111 133333333221 2469999999999999999999999
Q ss_pred ecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 808 MGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 808 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|+|+.+.+++.||+|+.+++-++|.++|+.
T Consensus 243 m~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 243 MGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred ecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 999999999999999999999999999873
No 42
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.02 E-value=4.3e-10 Score=94.26 Aligned_cols=67 Identities=25% Similarity=0.478 Sum_probs=60.7
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSP--------ETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCH--------HHHHHHHHHCCCCcEe
Confidence 568999999999999999999999999999999999999999999766554 7889999999998653
No 43
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.01 E-value=6.9e-10 Score=91.77 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=59.1
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.+.++++||++.
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQA--------TEICQAINELGYQAE 66 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHTTSSCEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 36899999999999999999999999999999999999999999866655 789999999999764
No 44
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.01 E-value=6.8e-10 Score=92.67 Aligned_cols=67 Identities=28% Similarity=0.523 Sum_probs=58.3
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++. .+. +.+.++++++||++.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTP--------QILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHcCCCcee
Confidence 357899999999999999999999999999999999999999999865 454 7889999999998643
No 45
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.01 E-value=1e-09 Score=90.47 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=59.4
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
...|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.+.++++||++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSV--------KDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCc
Confidence 467999999999999999999999999999999999999999999866655 77899999999975
No 46
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.01 E-value=6.2e-10 Score=92.64 Aligned_cols=64 Identities=39% Similarity=0.541 Sum_probs=58.4
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++. .+. +.+.++++++||++.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSP--------DALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCH--------HHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCH--------HHHHHHHHHCCCceEe
Confidence 588999999999999999999999999999999999999999876 344 7899999999998754
No 47
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.00 E-value=9.6e-10 Score=92.82 Aligned_cols=67 Identities=21% Similarity=0.300 Sum_probs=60.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+.+..|.|+||+|++|+..|+++|++++||.+++||+.++++.|.|++. . . +.+.++++++||++.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~-~-~--------~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND-I-R--------AQVESALQKAGYSLRD 68 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC-C-H--------HHHHHHHHHHTCEEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC-C-H--------HHHHHHHHHcCCcccc
Confidence 3467899999999999999999999999999999999999999999874 2 3 6789999999998764
No 48
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.99 E-value=1.2e-09 Score=118.21 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=103.7
Q ss_pred hCCCeEEEEEECCEEEEEEEecc-cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVED-RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------------- 760 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D-~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-------------- 760 (932)
......+++..||+++- -.. .+.+.+.++|++|+++|++++++||++...+..+.+++|.+.
T Consensus 18 ~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~ 94 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPK 94 (283)
T ss_dssp -CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSS
T ss_pred ccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECC
Confidence 44567888888998751 223 688999999999999999999999999998888777666421
Q ss_pred C---------------------c-------------eecc--------------------------c------------C
Q 002354 761 D---------------------K-------------VLSG--------------------------V------------K 768 (932)
Q Consensus 761 ~---------------------~-------------v~~~--------------------------~------------~ 768 (932)
. . ++.. + .
T Consensus 95 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~ 174 (283)
T 3dao_A 95 EILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHP 174 (283)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECS
T ss_pred EEEEEecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcC
Confidence 0 0 0000 0 0
Q ss_pred hh----------------------------------hHHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecC
Q 002354 769 PN----------------------------------EKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGG 810 (932)
Q Consensus 769 p~----------------------------------~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~ 810 (932)
++ .|...++.+.+. ...|++|||+.||.+|++.|++||||+|
T Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~n 254 (283)
T 3dao_A 175 DKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSN 254 (283)
T ss_dssp SCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETT
T ss_pred hHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCC
Confidence 11 122223332221 2459999999999999999999999999
Q ss_pred chHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 811 GVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 811 ~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+.+.+|+.||+|+.+++-++|.++|+
T Consensus 255 a~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 255 ARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp SCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CCHHHHHhcCeECCCCCCChHHHHHH
Confidence 99999999999999999999999886
No 49
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.99 E-value=9.3e-10 Score=90.39 Aligned_cols=64 Identities=17% Similarity=0.287 Sum_probs=58.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++.. +. +.+.++++++||++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~--------~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQ--------DLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CH--------HHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CH--------HHHHHHHHHcCCCc
Confidence 357899999999999999999999999999999999999999998764 44 78999999999975
No 50
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.98 E-value=1.2e-09 Score=90.71 Aligned_cols=67 Identities=28% Similarity=0.431 Sum_probs=60.5
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
.+..|.|+||+|++|+..|+++|++++||..+++|+.++++.|.|++...+. +.+.++++++||++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSE--------ITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCT--------HHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcc
Confidence 4567999999999999999999999999999999999999999999766555 778999999999763
No 51
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.98 E-value=7e-10 Score=119.51 Aligned_cols=135 Identities=21% Similarity=0.320 Sum_probs=86.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC------------------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------------ 760 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~------------------ 760 (932)
...+++..||+++- -...+.+.+.+++++|++.|++++++||++...+..+.+++|++.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~ 81 (279)
T 3mpo_A 5 IKLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISG 81 (279)
T ss_dssp CCEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTS
T ss_pred eEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCC
Confidence 35677788888874 245688999999999999999999999999999999999998752
Q ss_pred Cceecc-c----------------------------------------------------------------------Ch
Q 002354 761 DKVLSG-V----------------------------------------------------------------------KP 769 (932)
Q Consensus 761 ~~v~~~-~----------------------------------------------------------------------~p 769 (932)
..++.. + .+
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 161 (279)
T 3mpo_A 82 KVLTNHSLTYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYP 161 (279)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCH
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCH
Confidence 000000 0 00
Q ss_pred hh----------------------------------HHHHHHHHhhC----CCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 NE----------------------------------KKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~~----------------------------------K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+. |...++.+.+. ...+++|||+.||.+|++.|++|+||+|+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na 241 (279)
T 3mpo_A 162 QVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNA 241 (279)
T ss_dssp HHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCC
Confidence 10 22222222221 24599999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+.+|+.||+|+.+++-++|.++|+
T Consensus 242 ~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 242 IDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHCSCBC------CHHHHHC
T ss_pred CHHHHHhcceeccCCCccHHHHHHH
Confidence 9999999999999999999999876
No 52
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.97 E-value=9.4e-10 Score=92.96 Aligned_cols=68 Identities=28% Similarity=0.375 Sum_probs=60.9
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+||+|++|+..|+++|.+++||.++++|+.++++.|.|++...+. +.+.++++++||++.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGP--------RDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHH--------HHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCCcee
Confidence 3578999999999999999999999999999999999999999998766554 6789999999998654
No 53
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.97 E-value=2.2e-09 Score=108.98 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=103.5
Q ss_pred CCCeEEEEEECCEEE-EEEEecc------cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh
Q 002354 697 MNQSLVYVGVDNMLA-GLIYVED------RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 769 (932)
Q Consensus 697 ~g~~~~~va~~~~~l-G~i~l~D------~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p 769 (932)
...+.+++..|+++. +-..+.. ........+++.|+++|++++++||++...+..+.+++|++ .++....|
T Consensus 24 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~~~kp 101 (188)
T 2r8e_A 24 ENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQGQSN 101 (188)
T ss_dssp HTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEECSCSC
T ss_pred hcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeecCCCC
Confidence 356778888888765 2222211 12223345899999999999999999999999999999997 56665444
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH
Q 002354 770 NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 836 (932)
|...++.+.+ ..+.++||||+.||.++++.|+++++++++.+.+++.||+++.+.+..++. ++++
T Consensus 102 --k~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 102 --KLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred --CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4445544433 236799999999999999999999999988888888999999987666666 6665
No 54
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.96 E-value=1.6e-09 Score=91.60 Aligned_cols=69 Identities=32% Similarity=0.503 Sum_probs=61.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
..+..|.|+||+|++|+..|++.|.+++||.++++|+.++++.|.|++...+. +.+.+.++++||++.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHCCCceec
Confidence 45678999999999999999999999999999999999999999998766555 7789999999998654
No 55
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.95 E-value=1.2e-09 Score=125.10 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=106.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~~ 781 (932)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|++ .+++.. .++.|.++++.+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD--YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc--ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 78999999999999999999999999999999999999996 444321 25677777766544
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002354 782 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 844 (932)
Q Consensus 782 ~----g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 844 (932)
+ .+.++||||+.||.+|++.|++|+++ ++.+..++.||+++..+++.++..++.++|.-+..
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 3 35799999999999999999999999 78899999999999999999999999988776544
No 56
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.95 E-value=1.3e-09 Score=91.19 Aligned_cols=67 Identities=24% Similarity=0.484 Sum_probs=60.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+..|.|+||+|++|+..|++.|++++||.++++|+.++++.|.|+ ...+. +.+.++++++||++.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~--------~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTA--------DSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCH--------HHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCH--------HHHHHHHHHCCCceEEc
Confidence 467999999999999999999999999999999999999999998 55554 78999999999987543
No 57
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.94 E-value=1.7e-09 Score=92.76 Aligned_cols=70 Identities=29% Similarity=0.465 Sum_probs=62.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
.+..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.|++...+. +.+.++++++||++.+..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCH--------HHHHHHHHHHTSEEEECC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHcCCeEEecC
Confidence 4578999999999999999999999999999999999999999998766554 678899999999876543
No 58
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.92 E-value=1.4e-09 Score=111.93 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=97.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHh
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQ 780 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~ 780 (932)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .++... ....|.+.++.+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD--AAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc--hhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 358899999999999999999999999999999999999996 333221 2455666666554
Q ss_pred h----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 781 N----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 781 ~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
+ ....++||||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++++-
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 3 346799999999999999999999999 88899999999999999999998877653
No 59
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.92 E-value=2.8e-09 Score=98.57 Aligned_cols=70 Identities=23% Similarity=0.312 Sum_probs=63.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+.+..|.|+||+|++|+++|+++|++++||.+++||+.++++.|.|++...+. +.+.++++++||++.+.
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~--------~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSE--------ITIQERIAALGYTLAEP 76 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSH--------HHHHHHHHTTTCCEECC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCH--------HHHHHHHHHcCCeeeec
Confidence 45688999999999999999999999999999999999999999999866555 78999999999987643
No 60
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.91 E-value=5.3e-09 Score=103.08 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=93.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhH--HHHHHHHhhCCCEEEEEcCCcccH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK--KRFINELQNDENVVAMVGDGINDA 796 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K--~~~v~~l~~~g~~v~~vGDg~ND~ 796 (932)
.+.+++.++++.|+++|++++++||++...+..+.+++|+. .++....|... ..+++.+.-..+.++||||+.||.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDI 113 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 45688999999999999999999999999999999999997 56655444221 223333333456799999999999
Q ss_pred HHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHH-HHHH
Q 002354 797 AALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL-VALE 836 (932)
Q Consensus 797 ~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 836 (932)
++.+.|++++++.++.+..++.||+++.+.+..++. ++++
T Consensus 114 ~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 114 EVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 999999999999888888899999999988777766 4444
No 61
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.89 E-value=5.9e-09 Score=93.26 Aligned_cols=72 Identities=25% Similarity=0.219 Sum_probs=64.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+..|.|+||+|++|+..|+++|.+++||..++||+.++++.|.|++...+. +.+.++++++||.+.+...
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISP--------FQIAKALNEARLEANVRVN 86 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEecC
Confidence 55788999999999999999999999999999999999999999998765554 7789999999998766544
No 62
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.88 E-value=3.9e-09 Score=89.36 Aligned_cols=64 Identities=20% Similarity=0.382 Sum_probs=57.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCC-CeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQP-QVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~-GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+..|.|+ |+|++|+.+||++|++++ ||.+++||+.++++.|.++ .++ +.+.++++++||++.+
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPY--------DFILEKIKKTGKEVRS 69 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTSSCEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCCcee
Confidence 46789999 999999999999999999 9999999999999999973 333 7899999999998754
No 63
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.88 E-value=2.2e-09 Score=109.49 Aligned_cols=113 Identities=19% Similarity=0.301 Sum_probs=91.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----------------cChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 781 (932)
++.++++++++.|++.|+++.++||+....+..+.+.+|+. .++.. ..+..|.+.+..+.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--eEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 56789999999999999999999999999889999999986 22211 123567666665543
Q ss_pred ----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHH
Q 002354 782 ----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 782 ----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
..+.+++|||+.||++|++.|+++++|+ +.+..++.||+++.++++..+..+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence 2356999999999999999999999998 667788899999988778877543
No 64
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.88 E-value=3e-09 Score=103.53 Aligned_cols=71 Identities=28% Similarity=0.449 Sum_probs=64.4
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++++++||++.+..+
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASV--------SDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCCeEEcCc
Confidence 4678999999999999999999999999999999999999999999877665 7899999999999876544
No 65
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.87 E-value=2.1e-09 Score=88.81 Aligned_cols=61 Identities=31% Similarity=0.511 Sum_probs=54.3
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (932)
.|.|+||+|++|+.+|+++|++++||.++++|+.++++.| +. ..+. +.+.++++++||++.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~~-~~~~--------~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--EG-TADP--------KALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--CS-CCCH--------HHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--CC-CCCH--------HHHHHHHHHcCCCcE
Confidence 5889999999999999999999999999999999999999 33 3444 789999999999864
No 66
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.87 E-value=3.4e-09 Score=102.72 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=62.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++++++||++.+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGP--------RDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCH--------HHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCH--------HHHHHHHHhCCCceEe
Confidence 3578999999999999999999999999999999999999999999876665 7899999999998754
No 67
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.86 E-value=2.8e-09 Score=93.54 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=57.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
..+..|.|+||+|++|+..||++|++++||.+++||+.++++.|.++ .++ +.|.++|+++||++
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDA--------AHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCH--------HHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999999999999874 333 78999999999975
No 68
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.86 E-value=4.2e-09 Score=115.22 Aligned_cols=53 Identities=23% Similarity=0.234 Sum_probs=50.6
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..+++|||+.||.+|++.|++||||+|+.+.+|+.||+|+.+++-++|.++|+
T Consensus 245 ~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 245 DHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp GGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 45999999999999999999999999999999999999999999999999987
No 69
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.85 E-value=3.6e-09 Score=86.18 Aligned_cols=61 Identities=23% Similarity=0.431 Sum_probs=54.6
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
..|.|+||+|++|+..|+++|++++||.++++|+.++++.|.++ .+. +.+.++++++||++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~---~~~--------~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGE--------EQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS---SCH--------HHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec---CCH--------HHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999999999842 233 67999999999975
No 70
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.84 E-value=1.1e-08 Score=109.62 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=51.7
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
...++++||+.||.+|++.|++|++||++.+.+++.||+|+.+++-++|.++++.
T Consensus 216 ~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 216 QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 4569999999999999999999999999999999999999999999999998863
No 71
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.83 E-value=1.8e-08 Score=107.28 Aligned_cols=134 Identities=25% Similarity=0.327 Sum_probs=101.5
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------ 761 (932)
..+++..||+++- -+..+.+.+.+++++++++|++++++||++...+..+.++++++.-
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~ 80 (258)
T 2pq0_A 4 KIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQ 80 (258)
T ss_dssp CEEEECTBTTTBC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEEC
T ss_pred eEEEEeCCCCCcC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEe
Confidence 3566666777653 2356889999999999999999999999999999999998876310
Q ss_pred ---------------------------ceeccc-C-h-----------------------------------hh------
Q 002354 762 ---------------------------KVLSGV-K-P-----------------------------------NE------ 771 (932)
Q Consensus 762 ---------------------------~v~~~~-~-p-----------------------------------~~------ 771 (932)
.++... . + +.
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 160 (258)
T 2pq0_A 81 PLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVR 160 (258)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHH
Confidence 101100 0 0 00
Q ss_pred -----------------------HHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEe
Q 002354 772 -----------------------KKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 772 -----------------------K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~ 824 (932)
|..-++.+.+ ....++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.
T Consensus 161 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~ 240 (258)
T 2pq0_A 161 NYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTK 240 (258)
T ss_dssp HCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEEC
T ss_pred hCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeC
Confidence 1111232222 2356999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHH
Q 002354 825 GNRLSQLLVALE 836 (932)
Q Consensus 825 ~~~~~~i~~~i~ 836 (932)
+++-++|.++++
T Consensus 241 ~~~~dGva~~i~ 252 (258)
T 2pq0_A 241 PVDKEGIWYGLK 252 (258)
T ss_dssp CGGGTHHHHHHH
T ss_pred CCCcchHHHHHH
Confidence 999999999886
No 72
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=1.8e-08 Score=90.89 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=60.1
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
..++.|.|+ |+|++|+.+||++|++++||.+++||+.++++.|.++ .++ +.|.++|+++||++.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~--------~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPS--------QEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCH--------HHHHHHHHHhCCceEEccC
Confidence 456789999 9999999999999999999999999999999999984 233 7899999999999876544
No 73
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.81 E-value=9.3e-09 Score=109.97 Aligned_cols=54 Identities=35% Similarity=0.374 Sum_probs=51.3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
..++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-++|.++++.
T Consensus 211 ~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 211 SEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred HHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999863
No 74
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.80 E-value=1.2e-08 Score=113.30 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=90.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccC------------------------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK------------------------------ 768 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~------------------------------ 768 (932)
.+++++.++++.|++ |+.+.++|++....+..+.+.+++.. .+++...
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG-ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS-EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh-hhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 99999999998777777888888731 2222100
Q ss_pred ------------------------hhhHHHHHHHHhhCC--CEEEEEcCCcccHHHHHhC----CeeEEecCchHHHHhh
Q 002354 769 ------------------------PNEKKRFINELQNDE--NVVAMVGDGINDAAALASS----HIGVAMGGGVGAASEV 818 (932)
Q Consensus 769 ------------------------p~~K~~~v~~l~~~g--~~v~~vGDg~ND~~al~~A----~vgIa~~~~~~~a~~~ 818 (932)
+.+|...++.+..+. +.|+++||+.||++|++.| ++|||| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 112444444443322 3499999999999999999 999999 999999999
Q ss_pred cCEEEeCCChhHHHHHHHH
Q 002354 819 ASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 819 ad~vl~~~~~~~i~~~i~~ 837 (932)
||+|+.+++.++|.++++.
T Consensus 260 Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHHH
Confidence 9999999999888887663
No 75
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.80 E-value=5.6e-09 Score=86.55 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=55.6
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..|.|+||+|++|+..|+++|+++ ||.++++|+.++++.|.+++. +.+.++++++||++.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~------------~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL------------DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH------------HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH------------HHHHHHHHHcCCceeeE
Confidence 579999999999999999999999 999999999999999998753 25888999999987643
No 76
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.78 E-value=1.9e-08 Score=105.41 Aligned_cols=135 Identities=21% Similarity=0.192 Sum_probs=104.7
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCc-------eec-------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDK-------VLS------- 765 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------v~~------- 765 (932)
..+++..||+++. -...+.+.+.+++++|+++|++++++||++...+..+.+.+|++... ++.
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (231)
T 1wr8_A 4 KAISIDIDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 80 (231)
T ss_dssp CEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred eEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEe
Confidence 4567777888764 24568899999999999999999999999999999999999875310 000
Q ss_pred ------------------cc--------------------C---------------------------h--hhHHHHHHH
Q 002354 766 ------------------GV--------------------K---------------------------P--NEKKRFINE 778 (932)
Q Consensus 766 ------------------~~--------------------~---------------------------p--~~K~~~v~~ 778 (932)
++ . | ..|...++.
T Consensus 81 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 81 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHH
Confidence 00 0 1 124444444
Q ss_pred Hhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 779 LQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 779 l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
+.+ ....++++||+.||.+|++.|+++++|+++.+..++.||+++.+++-++|.++++.
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 432 13469999999999999999999999999999999999999998888899888763
No 77
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.77 E-value=8.1e-09 Score=113.77 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=97.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc-----------------ChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-----------------KPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~v~~l~~ 781 (932)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. .++... .++.|.+.++.+.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~--~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD--YAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC--eEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999996 444422 34566666655433
Q ss_pred ----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 782 ----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 782 ----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
....++||||+.||++|++.|++++++ ++.+..++.||.++..+++..+.++++
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 346799999999999999999999999 678888999999999999998887654
No 78
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.76 E-value=1.3e-08 Score=110.13 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=102.2
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---C---------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---D--------------- 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~--------------- 761 (932)
..+++..||+++. -...+.+.+.++|++|+++|++++++||++...+..+.++++++. .
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~ 82 (282)
T 1rkq_A 6 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 82 (282)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCC
Confidence 4677778888764 245688999999999999999999999999999999999998742 0
Q ss_pred ---------------------------------ceecc----------------c-----------------------Ch
Q 002354 762 ---------------------------------KVLSG----------------V-----------------------KP 769 (932)
Q Consensus 762 ---------------------------------~v~~~----------------~-----------------------~p 769 (932)
.+|.. + .+
T Consensus 83 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 162 (282)
T 1rkq_A 83 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP 162 (282)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCH
T ss_pred eEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCH
Confidence 01110 0 00
Q ss_pred h----------------------------------hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 770 N----------------------------------EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 770 ~----------------------------------~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
+ .|...++.+.+ ....++++||+.||.+|++.|++|++|+++
T Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~ 242 (282)
T 1rkq_A 163 AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA 242 (282)
T ss_dssp HHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCC
Confidence 0 01111111111 124589999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 812 VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 812 ~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.+..++.||+++.+++.++|.++++
T Consensus 243 ~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 243 IPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred cHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999999999886
No 79
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.71 E-value=4.5e-08 Score=99.96 Aligned_cols=114 Identities=17% Similarity=0.267 Sum_probs=89.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-----------------ccChhhHHHHHHHH-hh
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINEL-QN 781 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-----------------~~~p~~K~~~v~~l-~~ 781 (932)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..+.++. ...|+.|.+.+..+ .-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGL 162 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGG
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCC
Confidence 7899999999999999999999999999999999999996433332 23455677777665 55
Q ss_pred CCCEEEEEcCCcccHHHHHh----CCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 782 DENVVAMVGDGINDAAALAS----SHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 782 ~g~~v~~vGDg~ND~~al~~----A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
....++||||+.||.+|++. +.+++++++..+..++.||+++. ++..+.+++
T Consensus 163 ~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 163 IDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp CCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred CCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 67899999999999999976 34445555777888899999984 677666543
No 80
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.71 E-value=2.5e-08 Score=102.30 Aligned_cols=71 Identities=25% Similarity=0.411 Sum_probs=63.2
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
.++.|.|+||+|++|+++||++|++++||.+++||+.++++.|.|++...++ +.|.++|+++||++.+..+
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISP--------EELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCH--------HHHHHHHHHcCCceEEcCC
Confidence 4688999999999999999999999999999999999999999999876665 7899999999998766543
No 81
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.70 E-value=1.2e-08 Score=102.94 Aligned_cols=109 Identities=20% Similarity=0.380 Sum_probs=90.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--c------ee--cccChhhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--K------VL--SGVKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~------v~--~~~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.|++.|++++++|+++...+..+ +.+|+... . ++ ....|..|...++.+ ....++|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i~ 155 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFILA 155 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEEE
Confidence 7899999999999999999999999999888888 99998521 0 00 123457799988888 5678999
Q ss_pred EcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||++|++.|+++++|+++.+ .||+++. ++..+.++++
T Consensus 156 iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 156 MGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred EeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 9999999999999999999998776 8999985 6676776654
No 82
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.63 E-value=2.2e-08 Score=107.65 Aligned_cols=53 Identities=25% Similarity=0.293 Sum_probs=49.5
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++.||+|+.+++-++|.++++
T Consensus 208 ~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 208 QNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp GGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 35899999999999999999999999999999999999999888899998876
No 83
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.63 E-value=4.6e-08 Score=99.81 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=93.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----CceecccChhhH------HHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSGVKPNEK------KRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~~~~p~~K------~~~v~~l~~~g~~v~~ 788 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++.-....| ..+.+.+.-....++|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~ 149 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVM 149 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 467899999999999999999999999999999999999841 234433222222 3344444444567999
Q ss_pred EcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 838 (932)
|||+.||+.|.+.|++ +|+|+++.+..++.||+++ +++..+...++..
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 9999999999999999 9999988888888899988 4788888877653
No 84
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.61 E-value=9e-08 Score=102.63 Aligned_cols=133 Identities=20% Similarity=0.185 Sum_probs=100.3
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-C-----------------
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-D----------------- 761 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~----------------- 761 (932)
..+++..||+++- -...+.+.+.++|++ +++|++++++||++...+..+.+++|++. .
T Consensus 3 kli~~DlDGTLl~---~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i 78 (268)
T 1nf2_A 3 RVFVFDLDGTLLN---DNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVI 78 (268)
T ss_dssp CEEEEECCCCCSC---TTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEE
T ss_pred cEEEEeCCCcCCC---CCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEE
Confidence 4567778888764 234688999999999 99999999999999999999999998742 0
Q ss_pred ------------------------------ceec--------------ccC------------------------hhhHH
Q 002354 762 ------------------------------KVLS--------------GVK------------------------PNEKK 773 (932)
Q Consensus 762 ------------------------------~v~~--------------~~~------------------------p~~K~ 773 (932)
.++. ++. ++...
T Consensus 79 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~ 158 (268)
T 1nf2_A 79 LNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLD 158 (268)
T ss_dssp EECCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHH
T ss_pred EecCCCHHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHH
Confidence 0111 000 00001
Q ss_pred HHHHHHhh----C----------------------------------CCEEEEEcCCcccHHHHHhCCeeEEecCchHHH
Q 002354 774 RFINELQN----D----------------------------------ENVVAMVGDGINDAAALASSHIGVAMGGGVGAA 815 (932)
Q Consensus 774 ~~v~~l~~----~----------------------------------g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a 815 (932)
++.+.+++ . ...++++||+.||.+|++.|++|++|+++.+..
T Consensus 159 ~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~ 238 (268)
T 1nf2_A 159 ELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKV 238 (268)
T ss_dssp HHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHH
T ss_pred HHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHH
Confidence 12222211 0 134889999999999999999999999999999
Q ss_pred HhhcCEEEeCCChhHHHHHHH
Q 002354 816 SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 816 ~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++.||+++.+++.++|.++++
T Consensus 239 ~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 239 KEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp HHHCSEECCCTTTTHHHHHHT
T ss_pred HhhCCEEEccCCcchHHHHHH
Confidence 999999999989999998875
No 85
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.61 E-value=6e-08 Score=93.78 Aligned_cols=69 Identities=23% Similarity=0.387 Sum_probs=62.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
+.+..|.|+||+|++|+..||++|++++||.+++||+.++++.|.|++...+. +.+.+++++.||++..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~~~ 71 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQP--------LEIAQFIQDLGFEAAV 71 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCH--------HHHHHHHHHHTCEEEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCH--------HHHHHHHhcCCCceEe
Confidence 45688999999999999999999999999999999999999999998765554 6789999999998754
No 86
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.58 E-value=1.8e-07 Score=95.39 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=92.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec----------ccChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS----------GVKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~----------~~~p~~K~~~v~~l~~~g~~ 785 (932)
++.|++.+.++.|++. ++++++|+.+...+..+.+.+|+.. +.+.. .-.|+.|...++.+...+..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~ 147 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence 5689999999999999 9999999999999999999999973 11111 14567899999999888899
Q ss_pred EEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++||||+.||++|.+.|++++++.. .+..++.++.++..+++..+.++++
T Consensus 148 ~~~iGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 148 VIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESC-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred EEEEeCChhhHHHHHhcCccEEECC-cHHHHHHHhhhccccchHHHHHHHH
Confidence 9999999999999999999999854 4444544443322367888877664
No 87
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.57 E-value=9.3e-08 Score=79.97 Aligned_cols=61 Identities=23% Similarity=0.373 Sum_probs=52.9
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
+..|.|+||+|++|+..|+++|++++||.+++||+.++++.|.++.. .+.++++||.+...
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~---------------~~~i~~~Gy~~~~~ 64 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS---------------IQQVEQAGAFEHLK 64 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC---------------HHHHHHHHTTTTCE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc---------------HHHHHHhCCCcccc
Confidence 56899999999999999999999999999999999999999998752 12567889986644
No 88
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.53 E-value=5e-08 Score=103.19 Aligned_cols=53 Identities=17% Similarity=0.150 Sum_probs=48.7
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh-------cCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV-------ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~-------ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-++|.++++
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred HHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 35899999999999999999999999999999986 889999999999999886
No 89
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.53 E-value=2e-07 Score=96.95 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=92.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~ 788 (932)
..+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 4578999999999999999999999999999999999999852 22222 21 223334555666556678999
Q ss_pred EcCCcccHHHHHhCCe---eEEecCch-HHHHh-hcCEEEeCCChhHHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI---GVAMGGGV-GAASE-VASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 789 vGDg~ND~~al~~A~v---gIa~~~~~-~~a~~-~ad~vl~~~~~~~i~~~i~~g 838 (932)
|||+.||+.|++.|++ +|++|++. +..++ .||+++ +++..+.++++.+
T Consensus 183 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 183 IGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp EESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred EcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 9999999999999999 88888443 55554 799998 4788888887754
No 90
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.52 E-value=5.5e-07 Score=97.52 Aligned_cols=53 Identities=28% Similarity=0.389 Sum_probs=49.8
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-++|.++|+
T Consensus 233 ~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 233 EETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp GGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999999999999999886
No 91
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=98.51 E-value=4e-07 Score=99.47 Aligned_cols=136 Identities=21% Similarity=0.271 Sum_probs=103.4
Q ss_pred CeEEEEEECCEEEEEEEe-cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcC-CC---CC----------
Q 002354 699 QSLVYVGVDNMLAGLIYV-EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA--SLVG-IP---KD---------- 761 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l-~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia--~~~g-i~---~~---------- 761 (932)
...+++..||+++. - ...+.+.+.++|++|+++|++++++||++...+..+. ++++ ++ ..
T Consensus 27 ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~ 103 (301)
T 2b30_A 27 IKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 103 (301)
T ss_dssp CCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred ccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEE
Confidence 46888888998864 2 3468899999999999999999999999999999999 8877 53 10
Q ss_pred ----------------------------c----eec-c----------c---------C---------------------
Q 002354 762 ----------------------------K----VLS-G----------V---------K--------------------- 768 (932)
Q Consensus 762 ----------------------------~----v~~-~----------~---------~--------------------- 768 (932)
. ++. . . .
T Consensus 104 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~ 183 (301)
T 2b30_A 104 DQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLM 183 (301)
T ss_dssp CTTCCEEEECCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEE
T ss_pred eCCCCEEEEccCCHHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEE
Confidence 1 121 0 0 0
Q ss_pred ----hhhHHHHHHHHhh---C-----------------------------------CCEEEEEcCCcccHHHHHhCCeeE
Q 002354 769 ----PNEKKRFINELQN---D-----------------------------------ENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 769 ----p~~K~~~v~~l~~---~-----------------------------------g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+++..++.+.+++ . ...++++||+.||.+|++.|++|+
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v 263 (301)
T 2b30_A 184 IVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF 263 (301)
T ss_dssp ECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE
Confidence 0001122222321 0 135889999999999999999999
Q ss_pred EecCchHHHHhhcCEEEe-CCChhHHHHHHHH
Q 002354 807 AMGGGVGAASEVASVVLM-GNRLSQLLVALEL 837 (932)
Q Consensus 807 a~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~~ 837 (932)
+|+++.+..++.||+++. +++.++|.++|+.
T Consensus 264 a~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 264 AVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred EEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 999999999999999999 9999999998863
No 92
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.45 E-value=2.7e-07 Score=95.11 Aligned_cols=118 Identities=15% Similarity=0.229 Sum_probs=89.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccCh--hhH----HHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKP--NEK----KRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p--~~K----~~~v~~l~~~g~~v~~ 788 (932)
..+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++ +...+ ..| ..+.+.+.-....+++
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~ 164 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM 164 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence 3578999999999999999999999999999999999999862 2222 22211 123 3344444444568999
Q ss_pred EcCCcccHHHHHhCCe---eEEecCchHHH--HhhcCEEEeCCChhHHHHHHHH
Q 002354 789 VGDGINDAAALASSHI---GVAMGGGVGAA--SEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 789 vGDg~ND~~al~~A~v---gIa~~~~~~~a--~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|||+.||+.|++.|++ +|++|++.... +..||+++. ++..+.+++..
T Consensus 165 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 165 IGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp EESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred ECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 9999999999999999 88888654433 578999984 78888877764
No 93
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.44 E-value=4e-07 Score=94.47 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.9
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+++|.|+ |+|++|+++||++|++++||.+++||+.++++.|.++ .++ +++.++|+++||++.+...
T Consensus 5 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aI~~~Gy~a~~~~~ 72 (222)
T 1qup_A 5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 72 (222)
T ss_dssp CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHHTTCCCEEECC
T ss_pred ceEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCH--------HHHHHHHHHcCCccccccC
Confidence 456789999 9999999999999999999999999999999999863 233 7899999999999876554
No 94
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=98.43 E-value=4.5e-07 Score=96.24 Aligned_cols=119 Identities=20% Similarity=0.220 Sum_probs=87.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-cc------ChhhHHHHHHHHhhCC-CEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GV------KPNEKKRFINELQNDE-NVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~------~p~~K~~~v~~l~~~g-~~v~ 787 (932)
.+.+++.+.++.|++.|+++.++|++.......+.+.+|+.. +.+++ .. .|+--..+.+.+.-.. ..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 182 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 182 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEE
Confidence 467899999999999999999999999988888888887642 12221 11 2233344555555555 7899
Q ss_pred EEcCCcccHHHHHhCC---eeEEecCc------------------------hHHHHhh-cCEEEeCCChhHHHHHHHHHH
Q 002354 788 MVGDGINDAAALASSH---IGVAMGGG------------------------VGAASEV-ASVVLMGNRLSQLLVALELSR 839 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~---vgIa~~~~------------------------~~~a~~~-ad~vl~~~~~~~i~~~i~~gR 839 (932)
+|||+.||++|++.|+ +++++|++ .+..++. ||+++ +++..+..+++...
T Consensus 183 ~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 260 (267)
T 1swv_A 183 KVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEHIE 260 (267)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec--cCHHHHHHHHHHHh
Confidence 9999999999999999 56667755 3344444 99998 47888887775543
No 95
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=98.42 E-value=1.4e-06 Score=90.33 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec-----------------ccChhhHHHHHHHHhh
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----------------GVKPNEKKRFINELQN 781 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~-----------------~~~p~~K~~~v~~l~~ 781 (932)
.+.|++.+.++.|++.|++++++|+.....+..+++.+|++ .+++ ...+..|.+.++.+.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~ 169 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ--HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLA 169 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC--EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999996 2222 1234667776665433
Q ss_pred -CC------CEEEEEcCCcccHHHHHhCCeeEEecCc
Q 002354 782 -DE------NVVAMVGDGINDAAALASSHIGVAMGGG 811 (932)
Q Consensus 782 -~g------~~v~~vGDg~ND~~al~~A~vgIa~~~~ 811 (932)
.| ..++|+||+.||++|++.|++++++...
T Consensus 170 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 170 GMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred HcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 34 6899999999999999999999999644
No 96
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.41 E-value=3e-07 Score=95.18 Aligned_cols=115 Identities=23% Similarity=0.391 Sum_probs=87.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------------c------ChhhHHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------V------KPNEKKRFINEL 779 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------------~------~p~~K~~~v~~l 779 (932)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+..+.++.. - .+..|.+.++.+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 165 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 165 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHH
Confidence 688999999999999999999999999999999999999974223321 1 123677777665
Q ss_pred hhC-C-CEEEEEcCCcccHHHHHhCCeeEEecCc--hHHHHhhcCEEEeCCChhHHHHHH
Q 002354 780 QND-E-NVVAMVGDGINDAAALASSHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 780 ~~~-g-~~v~~vGDg~ND~~al~~A~vgIa~~~~--~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
.++ | ..++||||+.||+.+.+.|+++|+++.. .+.....+|+++. ++..+..++
T Consensus 166 ~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 166 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred HHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 442 3 5799999999999999999999888743 3445567899884 566665543
No 97
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=98.40 E-value=6.5e-07 Score=92.76 Aligned_cols=116 Identities=14% Similarity=0.065 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.. +.++ +...+..| ..+.+.+.-....++||
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 3689999999999999999999998754 778889999853 1222 22222233 45556665566789999
Q ss_pred cCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||+.||+.|.+.|+++++|.++.+..+ .||+++.+.+--.+..++++
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred eCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 999999999999999999997776666 89999976554445555543
No 98
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.38 E-value=6.2e-07 Score=86.87 Aligned_cols=66 Identities=33% Similarity=0.516 Sum_probs=58.8
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
.+..|.|+||+|++|+..||+.|++++||.++++|+.++++.+.+++...+. +.+.+.++++||++
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGT--------AAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCH--------HHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCH--------HHHHHHHHHcCCcc
Confidence 4567999999999999999999999999999999999999999998765554 67888899999965
No 99
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.38 E-value=4.1e-07 Score=93.23 Aligned_cols=68 Identities=25% Similarity=0.323 Sum_probs=59.6
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhc---Ccccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC---GFKSS 200 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~---Gy~~~ 200 (932)
..++.|.|+||+|++|+++||++|.+++||.+++||+.++++.|.|++...+. +.+.++++++ ||.+.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~--------~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSP--------VALQRAIEALPPGNFKVS 89 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCH--------HHHHHHHTTSSSSCSEEE
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHHhccCCeEEE
Confidence 45678999999999999999999999999999999999999999999876555 6789999998 36553
No 100
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=98.37 E-value=2.4e-07 Score=99.77 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=79.2
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-C-------cee------
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-D-------KVL------ 764 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~-------~v~------ 764 (932)
...+++..||+++. -.+.+.+.+.++|++|+++|++++++||++...+..+.+++|++. . .++
T Consensus 9 ~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 85 (275)
T 1xvi_A 9 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQ 85 (275)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCccc
Confidence 46788888998873 134466778999999999999999999999999999999998742 0 011
Q ss_pred --------cc-cC----------------------------------------------------------hhhHHHHHH
Q 002354 765 --------SG-VK----------------------------------------------------------PNEKKRFIN 777 (932)
Q Consensus 765 --------~~-~~----------------------------------------------------------p~~K~~~v~ 777 (932)
.. ++ ++...++.+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (275)
T 1xvi_A 86 EIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTA 165 (275)
T ss_dssp TSTTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHH
T ss_pred ccCceEEEecCCCHHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHH
Confidence 00 00 000001111
Q ss_pred HHhh-------------------------------CC----CE--EEEEcCCcccHHHHHhCCeeEEecCch---HHHHh
Q 002354 778 ELQN-------------------------------DE----NV--VAMVGDGINDAAALASSHIGVAMGGGV---GAASE 817 (932)
Q Consensus 778 ~l~~-------------------------------~g----~~--v~~vGDg~ND~~al~~A~vgIa~~~~~---~~a~~ 817 (932)
.+.+ .| .. ++++||+.||.+|++.|++||+|+++. +..++
T Consensus 166 ~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~ 245 (275)
T 1xvi_A 166 RLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHD 245 (275)
T ss_dssp HHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC--------
T ss_pred HHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhcc
Confidence 1111 02 34 999999999999999999999999987 56655
Q ss_pred h--cC-EEEeCCChhHHHHHHH
Q 002354 818 V--AS-VVLMGNRLSQLLVALE 836 (932)
Q Consensus 818 ~--ad-~vl~~~~~~~i~~~i~ 836 (932)
. || +++.+++-++|.++++
T Consensus 246 ~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 246 EDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp ----------------------
T ss_pred ccCCceeEccCCCchHHHHHHH
Confidence 3 78 8888889999998876
No 101
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=98.36 E-value=5.6e-07 Score=92.06 Aligned_cols=115 Identities=12% Similarity=0.068 Sum_probs=84.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|+++.++|++ .....+.+.+|+.. +.+++ .. . |+--..+.+.+.-....+++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i 168 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL 168 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence 46789999999999999999999988 44567788888752 12222 11 1 222233444444445679999
Q ss_pred cCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||++|++.|+++++|.++.+..+ .||+++.+.+--.+..+++
T Consensus 169 GD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 169 EDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp ESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHHH
Confidence 999999999999999999998887777 8999997665555555543
No 102
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.36 E-value=1.4e-06 Score=88.28 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=88.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++||
T Consensus 84 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~i 163 (216)
T 2pib_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceEEEE
Confidence 568899999999999999999999999999999999999862 22222 11 2233344555555566789999
Q ss_pred cCCcccHHHHHhCCe-----eEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHI-----GVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~v-----gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||+.|.+.|++ ++++++......+.+|+++. ++..+..+++
T Consensus 164 GD~~~Di~~a~~aG~~~i~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 213 (216)
T 2pib_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp ECSHHHHHHHHHTTCCEEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred eCcHHHHHHHHHcCCcEEehccCCCCCchhhcchhheeeC--CHHHHHHHHH
Confidence 999999999999999 55556544444478999986 6777777654
No 103
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.34 E-value=6.6e-07 Score=91.66 Aligned_cols=112 Identities=18% Similarity=0.147 Sum_probs=85.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+........+.+.+|+.. +.++. ... |+--..+.+.+.-....+++|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~i 173 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 173 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 457899999999999999999999999998999999999852 22222 222 333344555555556789999
Q ss_pred cCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHH
Q 002354 790 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLL 832 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~ 832 (932)
||+.||++|++.|++++++ +++.+..+..||+++. ++..+.
T Consensus 174 GD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~ 218 (226)
T 1te2_A 174 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELT 218 (226)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCC
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHh
Confidence 9999999999999999999 5666667888999985 444443
No 104
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=98.33 E-value=5.9e-07 Score=92.73 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=88.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-....+++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~i 170 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVI 170 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEE
Confidence 567899999999999999999999999999999999999863 22322 211 222233344444345679999
Q ss_pred cCCcccHHHHHhCCe---eEEec-CchHHHHhh-cCEEEeCCChhHHHHHHHHH
Q 002354 790 GDGINDAAALASSHI---GVAMG-GGVGAASEV-ASVVLMGNRLSQLLVALELS 838 (932)
Q Consensus 790 GDg~ND~~al~~A~v---gIa~~-~~~~~a~~~-ad~vl~~~~~~~i~~~i~~g 838 (932)
||+.||+.|++.|++ +|++| +..+..++. ||+++ +++..+..+++..
T Consensus 171 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 171 GDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp ESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred eCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 999999999999999 56666 555555654 99998 4788888877653
No 105
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=98.32 E-value=5e-07 Score=97.70 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=90.6
Q ss_pred ccHHHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCCc-------------ee
Q 002354 720 IRDDAAHVVNSLSSQ-GIGVYMLSGD---------------------KKNSAEYVASLVGIPKDK-------------VL 764 (932)
Q Consensus 720 lr~~~~~~i~~L~~~-Gi~v~~~TGd---------------------~~~~a~~ia~~~gi~~~~-------------v~ 764 (932)
.++++.+.++.|++. |+++.+.|.. ....+..+.+..|+.... .+
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 202 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD 202 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence 467888889999887 8888888865 455667777777874111 22
Q ss_pred cccCh--hhHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 765 SGVKP--NEKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 765 ~~~~p--~~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
....| ..|...++.+.+ ....++++||+.||.+|++.|+++++|+++.+..++.||+++.+++-+++.++++
T Consensus 203 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 33333 356666665544 3457999999999999999999999999999999999999999888889988876
No 106
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.29 E-value=1.1e-06 Score=93.46 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=46.3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
..++++||+.||.+|++.|++|++|+|+.+ . .+++++.+++-+++.++++.
T Consensus 195 ~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 195 RFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp TSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 679999999999999999999999999988 4 78899999999999888763
No 107
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=98.27 E-value=1.4e-06 Score=98.12 Aligned_cols=101 Identities=23% Similarity=0.274 Sum_probs=77.4
Q ss_pred CEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC----CCCceecc-----------------
Q 002354 708 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI----PKDKVLSG----------------- 766 (932)
Q Consensus 708 ~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi----~~~~v~~~----------------- 766 (932)
+.+.+...-...++|++++.|+.|+++|++|+|+||.....++.+|+++|+ ++++|++.
T Consensus 210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~ 289 (385)
T 4gxt_A 210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD 289 (385)
T ss_dssp CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT
T ss_pred ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc
Confidence 344445555567899999999999999999999999999999999999874 44444431
Q ss_pred ---cChhhHHHHHHHHhhC--C-CEEEEEcCCcccHHHHHh-CCeeEEe
Q 002354 767 ---VKPNEKKRFINELQND--E-NVVAMVGDGINDAAALAS-SHIGVAM 808 (932)
Q Consensus 767 ---~~p~~K~~~v~~l~~~--g-~~v~~vGDg~ND~~al~~-A~vgIa~ 808 (932)
...+.|.+.|+.+.+. | ..++++|||.||.+||+. +|.++++
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2346799999887533 2 358889999999999985 5555544
No 108
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=98.27 E-value=2.2e-06 Score=85.40 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=84.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCCcee-c-----cc----Ch--
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVG--IPKDKVL-S-----GV----KP-- 769 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~v~-~-----~~----~p-- 769 (932)
++.|++.+++++|+++|+++.++|+.+. ..+..+.+.+| ++ .++ + .. .|
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD--AIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC--EEEEECCCTTSCCSSSTTSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee--EEEEcCCCCCCCCCCCCCCH
Confidence 5789999999999999999999999886 56778888999 54 444 1 11 12
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCe---eEEecCchHHHH----hhcCEEEeCCChhHHHHHHH
Q 002354 770 NEKKRFINELQNDENVVAMVGDGINDAAALASSHI---GVAMGGGVGAAS----EVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 770 ~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~v---gIa~~~~~~~a~----~~ad~vl~~~~~~~i~~~i~ 836 (932)
+-=..+.+.+.-....++||||+.||+.|.+.|++ +|..|.+..... ..+|+++. ++..+.+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 105 GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEec--CHHHHHHHHH
Confidence 22234555555566789999999999999999995 666666555544 45788884 7887777653
No 109
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.26 E-value=1.5e-06 Score=91.61 Aligned_cols=68 Identities=18% Similarity=0.357 Sum_probs=59.3
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccccC
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (932)
+.+++|.|+ |+|++|+.+||++|++++||.+++||+.++++.|..+ .++ +++.++|+++||++.+...
T Consensus 6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~--------~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAP--------STIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCH--------HHHHHHHHTTTCCCEEEEE
T ss_pred ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC---CCH--------HHHHHHHHHhCCCcccccC
Confidence 356789999 9999999999999999999999999999999999843 233 7899999999999876543
No 110
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.25 E-value=1.4e-06 Score=89.02 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=81.2
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC----h--hhHHHHHHHHhhCCCEEEEEc
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK----P--NEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~----p--~~K~~~v~~l~~~g~~v~~vG 790 (932)
+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ ... | +--..+.+.+.-....+++||
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iG 169 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIG 169 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEc
Confidence 46899999999999999999999999999999999999853 12222 211 2 112333344433456799999
Q ss_pred CCcccHHHHHhCCeeEEe----cCchHHHHhh-cCEEEeCCChhHHHHHHH
Q 002354 791 DGINDAAALASSHIGVAM----GGGVGAASEV-ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~----~~~~~~a~~~-ad~vl~~~~~~~i~~~i~ 836 (932)
|+.||++|++.|++++++ +++.+..++. ||+++. ++..+.+.++
T Consensus 170 D~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 170 DSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp SSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC----
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 999999999999999887 4455555554 899885 5566655553
No 111
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=98.25 E-value=1.2e-06 Score=90.48 Aligned_cols=118 Identities=16% Similarity=0.111 Sum_probs=92.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~ 788 (932)
-.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++|
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 3567899999999999999999999999999999999999863 22222 11 122234455555555678999
Q ss_pred EcCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
|||+.||+.|.+.|++++++ +++.+..+..+|+++. ++..+.++++.
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 99999999999999999999 6666666778999984 78888888764
No 112
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.22 E-value=1e-06 Score=88.68 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=82.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-cc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|++...... ..+.+|+... .+++ .. . |+--..+.+.+.-....+++|
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~i 163 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 163 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEE
Confidence 45799999999999999999999999988888 8888898531 2222 11 1 222345555565556789999
Q ss_pred cCCcccHHHHHhCCee-EEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIG-VAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-Ia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.||++|++.|+++ |+|+++. . .+|+++. ++..+.+++
T Consensus 164 GD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 164 GDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp ESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred CCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 9999999999999997 8888776 3 6888874 566665543
No 113
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=98.20 E-value=2.3e-06 Score=89.11 Aligned_cols=116 Identities=17% Similarity=0.213 Sum_probs=86.4
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccCh--hhH----HHHHHHHhhC-CCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKP--NEK----KRFINELQND-ENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p--~~K----~~~v~~l~~~-g~~v~ 787 (932)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.++ +...+ ..| ..+.+.+.-. ...++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3578999999999999999999999999999999999999852 2222 22221 123 3344445445 67899
Q ss_pred EEcCCcccHHHHHhCCe---eEEecCchHHH--HhhcCEEEeCCChhHHHHHH
Q 002354 788 MVGDGINDAAALASSHI---GVAMGGGVGAA--SEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~v---gIa~~~~~~~a--~~~ad~vl~~~~~~~i~~~i 835 (932)
+|||+.||+.|.+.|++ ++++|++.... +..+|+++. ++..+.+++
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 99999999999999999 66667544333 478999985 566666554
No 114
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=98.20 E-value=3.5e-06 Score=87.10 Aligned_cols=113 Identities=12% Similarity=0.198 Sum_probs=83.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCC-EEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDEN-VVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~-~v~~ 788 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-... .+++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~ 182 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFF 182 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEE
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEE
Confidence 568999999999999999999999999999999999999852 22222 222 2223455566655566 7999
Q ss_pred EcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||+.|.+.|++ +|.++++.+ ..+|+++ +++..+.++++
T Consensus 183 vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 183 IGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp EESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred EcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 9999999999999997 677776654 3577776 46887777654
No 115
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=98.18 E-value=1.7e-06 Score=91.64 Aligned_cols=55 Identities=18% Similarity=0.359 Sum_probs=45.5
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
..+++..||+++ .+..-+.+.++|++|+++|++++++||++...+..+.+.+|++
T Consensus 3 kli~~DlDGTLl-----~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 3 RLIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp EEEEECCSTTTC-----TTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred cEEEEeCCCCcc-----CCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456677788887 3433345999999999999999999999999999999998873
No 116
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=98.17 E-value=6.1e-06 Score=85.17 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=89.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++. +++.++|+........+.+.+|+.. +.+++. .. |+--..+.+.+.-....+++|
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence 4578999999999999 9999999999999999999999852 222221 12 222344555555556789999
Q ss_pred cCCc-ccHHHHHhCC---eeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~---vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+ ++++++++.+..++.+|+++. ++..+..+++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 9997 9999999999 577778777777789999984 7777777765
No 117
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=98.16 E-value=1.6e-06 Score=89.29 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=89.3
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccC------hhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVK------PNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~------p~~K~~~v~~l~~~g~~v~~ 788 (932)
-.+.+++.+.++.|++.|+++.++|+........+.+.+|+.. +.+++ ... |+--..+.+.+.-....+++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 174 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF 174 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence 3578999999999999999999999999999999999999852 22322 211 22233445555545678999
Q ss_pred EcCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||+.|.+.|++++++ ++..+..+..+|+++. ++..+..+++
T Consensus 175 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 224 (230)
T 3um9_A 175 VSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRFS 224 (230)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTCC
T ss_pred EeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHHH
Confidence 99999999999999999999 4555556678999985 6777766543
No 118
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=98.16 E-value=6.4e-06 Score=87.41 Aligned_cols=117 Identities=16% Similarity=0.076 Sum_probs=86.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-ccC------hhhHHHHHHHHhhCC-CEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GVK------PNEKKRFINELQNDE-NVVA 787 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~~------p~~K~~~v~~l~~~g-~~v~ 787 (932)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ ... |+--..+.+.+.-.. ..++
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i 190 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCI 190 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEE
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEE
Confidence 567899999999999999999999999999999988888642 22222 111 222244555555566 7899
Q ss_pred EEcCCcccHHHHHhCC---eeEEecC------------------------chHHHHh-hcCEEEeCCChhHHHHHHHH
Q 002354 788 MVGDGINDAAALASSH---IGVAMGG------------------------GVGAASE-VASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~---vgIa~~~------------------------~~~~a~~-~ad~vl~~~~~~~i~~~i~~ 837 (932)
||||+.||+.|.+.|+ ++|++|. +.+..++ .+|+++. ++..+..+++.
T Consensus 191 ~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 191 KVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVID--SVADLETVITD 266 (277)
T ss_dssp EEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEES--SGGGTHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEec--CHHHHHHHHHH
Confidence 9999999999999999 4566663 2344444 4999994 78888877764
No 119
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=98.15 E-value=5.2e-06 Score=85.67 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=80.3
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCC--c-eeccc-C--hhhHHHH----HHHHh--hCCCE
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKD--K-VLSGV-K--PNEKKRF----INELQ--NDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~-v~~~~-~--p~~K~~~----v~~l~--~~g~~ 785 (932)
.+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+... . +++.. . ++-+... .+.+. -....
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~ 172 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ 172 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCccc
Confidence 3579999999999999 999999999999999999999998631 1 22221 1 1122333 33333 24467
Q ss_pred EEEEcCCcccHHHHHhCCee---EEecCchHHHHh--hcCEEEeCCChhHHHHHHH
Q 002354 786 VAMVGDGINDAAALASSHIG---VAMGGGVGAASE--VASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vg---Ia~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 836 (932)
+++|||+.||++|.+.|++. ++.+........ .+|+++. ++..+..+++
T Consensus 173 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 173 IVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp EEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 99999999999999999954 444544443333 3899885 4555555543
No 120
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=98.15 E-value=2.5e-06 Score=89.65 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=84.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++. ..| +--..+.+.+.-....++|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 192 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF 192 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence 3567899999999999999999999999999999999999852 122221 222 2334455566555678999
Q ss_pred EcCCcccHHHHHhCCeeEE-ecC----chHHHHhhcCEEEeCCChhHHHHH
Q 002354 789 VGDGINDAAALASSHIGVA-MGG----GVGAASEVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa-~~~----~~~~a~~~ad~vl~~~~~~~i~~~ 834 (932)
|||+.||++|.+.|++++. +.. +.+..+..+|+++. ++..+..+
T Consensus 193 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~~ 241 (243)
T 2hsz_A 193 VGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKI 241 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGG
T ss_pred EcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHHH
Confidence 9999999999999999844 432 23445677999884 56655443
No 121
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=98.14 E-value=4.5e-06 Score=88.11 Aligned_cols=118 Identities=15% Similarity=0.105 Sum_probs=87.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cc-eec-ccCh-hhH------HHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLS-GVKP-NEK------KRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~-v~~-~~~p-~~K------~~~v~~l~~~g~~v 786 (932)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +. +++ ...+ ..| ..+.+.+.-....+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC 188 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence 3567899999999999999999999999999999999999851 12 332 2222 222 33444444445789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCc-------hHHH-HhhcCEEEeCCChhHHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGG-------VGAA-SEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~-------~~~a-~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
++|||+.||+.|.+.|+++ |.+..+ .+.. ...+|+++ +++..+.++++.
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 9999999999999999998 555433 2333 34599998 478888888764
No 122
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=98.14 E-value=6.1e-06 Score=85.29 Aligned_cols=116 Identities=16% Similarity=0.221 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++. -.|+-...+.+.+.-....++|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI 161 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence 3568999999999999999999999999999999999999852 233331 1233345555666555678999
Q ss_pred EcCCcccHHHHHhCCee-EEecCc--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGINDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+.||++|.+.|++. |++..+ .... ..+|+++. ++..+..+++
T Consensus 162 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 162 VGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp EESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 99999999999999988 666432 2222 56888874 6777776654
No 123
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=98.13 E-value=1e-05 Score=83.32 Aligned_cols=116 Identities=20% Similarity=0.262 Sum_probs=83.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCcee-cc----------------
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK---------------KNSAEYVASLVGIPKDKVL-SG---------------- 766 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~v~-~~---------------- 766 (932)
++.|++.+++++|+++|++++++|+.. ...+..+.+++|+..+.++ +.
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~ 129 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 129 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcC
Confidence 678999999999999999999999998 4778888899998633333 11
Q ss_pred --cChhhHHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee--EEe--cCc-hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 767 --VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIG--VAM--GGG-VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 767 --~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg--Ia~--~~~-~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
-.|+--..+.+.+.-....++||||+.||+.+.+.|++. |.+ |.. .+.....+|+++. ++..+.+++.
T Consensus 130 ~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~el~~~l~ 204 (211)
T 2gmw_A 130 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 204 (211)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHHHHHHHH
Confidence 112222344555554567799999999999999999964 444 322 2333456899884 6887777654
No 124
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=98.12 E-value=4.9e-06 Score=85.75 Aligned_cols=116 Identities=12% Similarity=0.169 Sum_probs=84.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC--Cceecc-----cCh--hhHHHHHHHHhhCCCEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVV 786 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~v~~l~~~g~~v 786 (932)
.+.+++.+.++.|++.|+++.++|+.. ......+.+.+|+.. +.++.. ..| +--..+.+.+.-....+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 457999999999999999999999999 888889999999852 222221 122 22223333333345689
Q ss_pred EEEcCCc-ccHHHHHhCCeeEEe---cCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGI-NDAAALASSHIGVAM---GGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~-ND~~al~~A~vgIa~---~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+. ||+.|++.|++++++ ++..+..+..+|+++ +++..+..+++
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 9999999 999999999999999 443333445578777 46777776654
No 125
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=98.11 E-value=2.7e-06 Score=86.14 Aligned_cols=113 Identities=21% Similarity=0.179 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....+++|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i 168 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALII 168 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEE
Confidence 578999999999999999999999999999999999999852 22222 21 2233345556665556789999
Q ss_pred cCCcccHHHHHhCCeeEEecCc--hHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGG--VGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~--~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||+.||+.|.+.|++++++.+. ....+..+|+++. ++..+.+
T Consensus 169 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~~ 212 (214)
T 3e58_A 169 EDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVLD 212 (214)
T ss_dssp ECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGGG
T ss_pred eccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHHh
Confidence 9999999999999998888532 3344477999885 5555443
No 126
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=98.10 E-value=3e-06 Score=90.95 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhH----HHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGI--GVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEK----KRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi--~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K----~~~v~~l~~~g 783 (932)
++.|++.+.++.|++.|+ +++++|+.....+..+.+.+|+.. +.+++ .. .+.-| ..+.+.+.-..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 221 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR 221 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCC
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCC
Confidence 568999999999999999 999999999999999999999853 22221 11 11223 33444444455
Q ss_pred -CEEEEEcCCcccHHHHHhCCeeEEecCchHHH------HhhcCEEEeCCChhHHHHHH
Q 002354 784 -NVVAMVGDGINDAAALASSHIGVAMGGGVGAA------SEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 784 -~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a------~~~ad~vl~~~~~~~i~~~i 835 (932)
..++||||+.||+.|.+.|++|.+|+++.+.. ...||+++. ++..+.+++
T Consensus 222 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 222 YENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred cccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 78999999999999999999999887443332 237888884 676666544
No 127
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=98.07 E-value=7.2e-06 Score=85.69 Aligned_cols=116 Identities=21% Similarity=0.263 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CCceecc---------------cCh--------hhHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLSG---------------VKP--------NEKK 773 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~-~~~v~~~---------------~~p--------~~K~ 773 (932)
-++.|++.+.++.|+++|++++++|+.+...+..+.+ |+. .+.+++. -.| .+|.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 4678999999999999999999999999998888887 662 1233321 112 2477
Q ss_pred HHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhh--cCEEEeCCChhHHHHHHHH
Q 002354 774 RFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 774 ~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~--ad~vl~~~~~~~i~~~i~~ 837 (932)
..++.+......++||||+.||+.+.+.|++.++.....+...+. +|+++ +++..+..++..
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred HHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 888888877889999999999999999999998753222333333 66655 578888776653
No 128
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=98.06 E-value=8.5e-06 Score=84.83 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=80.6
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----Cceec-cc------ChhhHHHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLS-GV------KPNEKKRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~-~~------~p~~K~~~v~~l~~~g~~v 786 (932)
.++.+++.+.++.|++.|+++.++|+..........+. |+.. +.+++ .. .|+--..+.+.+.-....+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 185 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA 185 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence 46779999999999999999999999988877777777 8762 22222 11 1222344555555556789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCch--HH--HHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGV--GA--ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~--~~--a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+.||+.|.+.|++. |.+.++. .. .+..||+++. ++..+..+++
T Consensus 186 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 186 LVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp EEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 9999999999999999975 4444332 22 2247999984 6777776665
No 129
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=98.06 E-value=7.2e-06 Score=85.61 Aligned_cols=116 Identities=11% Similarity=0.092 Sum_probs=82.3
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----Cceecc-c------ChhhHHHHHHHHhhCCCEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK----DKVLSG-V------KPNEKKRFINELQNDENVV 786 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~v~~~-~------~p~~K~~~v~~l~~~g~~v 786 (932)
..+.+++.+.++.|++.|+++.++|+.....+....+. |+.. +.+++. . .|+--..+.+.+.-....+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 186 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA 186 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 35679999999999999999999999988877777777 8752 222221 1 1222233444444445689
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCchHH----HHhhcCEEEeCCChhHHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGVGA----ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
++|||+.||+.|.+.|++. |.+.++... .+..+|+++. ++..+.++++
T Consensus 187 i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 187 VVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 9999999999999999995 555443322 2346999984 7888877665
No 130
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.02 E-value=2.1e-05 Score=83.52 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=55.9
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 771 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 771 ~K~~~v~~l~~----~g~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
.|...++.+.+ ....++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 46655555543 3457999999999999999999999999999999999999998888888998875
No 131
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=98.02 E-value=9.5e-06 Score=84.94 Aligned_cols=115 Identities=18% Similarity=0.103 Sum_probs=86.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----c--ChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----V--KPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----~--~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
++.+++.+.++.|++. ++++++|+........+.+.+|+..+.+++. - .|+--..+.+.+.-....+++|||
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 198 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAA 198 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcC
Confidence 4578999999999986 9999999999999999999999864444332 1 122223344445445578999999
Q ss_pred CcccHHHHHhCCeeEEecC-----c---hHHH--HhhcCEEEeCCChhHHHHHHH
Q 002354 792 GINDAAALASSHIGVAMGG-----G---VGAA--SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~~-----~---~~~a--~~~ad~vl~~~~~~~i~~~i~ 836 (932)
+.||+.|.+.|+++++|.+ | .+.. +..+|+++. ++..+..++.
T Consensus 199 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 199 HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 9999999999999999975 2 2222 567899984 7888877764
No 132
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=98.01 E-value=5.4e-06 Score=85.76 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-c------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.. +.+++ . -.|+--..+.+.+.-....++||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 174 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV 174 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999852 22322 1 12222334455555455679999
Q ss_pred cCCcccHHHHHhCCeeEEec----CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMG----GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~----~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||+.|.+.|++++++- +..+..+..+|+++. ++..+..+++
T Consensus 175 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 175 ASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp ESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 99999999999999998882 333334556898884 6777665543
No 133
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=98.01 E-value=2.4e-05 Score=81.56 Aligned_cols=116 Identities=18% Similarity=0.175 Sum_probs=84.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc----Ch--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV----KP--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~----~p--~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .| +--..+.+.+.-....++||
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i 173 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV 173 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467899999999999999999999999999999999999853 22322 21 12 21233444454455689999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---cCchHHHHh---hcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAM---GGGVGAASE---VASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~---~~~~~~a~~---~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+++.+. |........ .+|+++. ++..+..+++
T Consensus 174 GD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 174 GDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred CCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 9998 999999999998655 433333333 6898874 6777766654
No 134
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.98 E-value=1.1e-05 Score=84.17 Aligned_cols=115 Identities=20% Similarity=0.150 Sum_probs=83.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....+++|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 184 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFV 184 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 577999999999999999999999999999999999999852 22322 21 2222334455555456689999
Q ss_pred cCCcccHHHHHhCCeeEEe---cCchHHHHhhc-CEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAM---GGGVGAASEVA-SVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~---~~~~~~a~~~a-d~vl~~~~~~~i~~~i 835 (932)
||+.||+.|.+.|++.... ++..+..+..+ |+++. ++..+..++
T Consensus 185 GD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 185 SSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred eCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHH
Confidence 9999999999999966443 43333334457 98884 677776655
No 135
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=97.98 E-value=4.6e-06 Score=87.75 Aligned_cols=62 Identities=19% Similarity=0.370 Sum_probs=55.1
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcccHHHHHhC--CeeEEecCchHHHHhhcCEEEeC-CChhHHHHHHHH
Q 002354 771 EKKRFINELQNDENVVAMVGDGINDAAALASS--HIGVAMGGGVGAASEVASVVLMG-NRLSQLLVALEL 837 (932)
Q Consensus 771 ~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A--~vgIa~~~~~~~a~~~ad~vl~~-~~~~~i~~~i~~ 837 (932)
+|..-++.|.+.-. |+++||+.||.+||+.| ++||||+|+ ++.||+++.+ ++.++|.++|+.
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 79999999987644 99999999999999999 999999998 6789999988 778888888763
No 136
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.97 E-value=1.9e-06 Score=87.67 Aligned_cols=111 Identities=9% Similarity=0.169 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.++ +......| ..+.+.+.-....+++|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v 161 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI 161 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence 4689999999999999 9999999999999999999999852 1222 22111223 44445554455789999
Q ss_pred cCCcccHHHHHhCCeeEEecC----chHHHHhhcCEEEeCCChhHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGG----GVGAASEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~----~~~~a~~~ad~vl~~~~~~~i~~ 833 (932)
||+.||++|.+.|++++++.+ ..+..++ +|+++. ++..+.+
T Consensus 162 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 162 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred CCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 999999999999999999742 3444455 999885 4555543
No 137
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.92 E-value=1.7e-05 Score=82.76 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=85.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-----cChh--hHHHHHHHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----VKPN--EKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~vGD 791 (932)
++.+++.+.++.|++. +++.++|+........+.+.+|+..+.+++. ..|+ --..+.+.+.-....+++|||
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 194 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAA 194 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeC
Confidence 5678999999999997 9999999999999999999999863333321 1221 112223333333467999999
Q ss_pred CcccHHHHHhCCeeEEecCchHH----------HHhhcCEEEeCCChhHHHHHHHH
Q 002354 792 GINDAAALASSHIGVAMGGGVGA----------ASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 792 g~ND~~al~~A~vgIa~~~~~~~----------a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
+.||+.|.+.|+++++|.+.... .+..+|+++ +++..+..++..
T Consensus 195 ~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 195 HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 99999999999999999752211 356789998 478888887754
No 138
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.92 E-value=3.1e-05 Score=79.51 Aligned_cols=112 Identities=15% Similarity=0.245 Sum_probs=80.1
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---Cceec-cc------Ch--hhHHHHHHHHhhCCCEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-GV------KP--NEKKRFINELQNDENVV 786 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~---~~v~~-~~------~p--~~K~~~v~~l~~~g~~v 786 (932)
++.+++.+.++.|+. +++++|+........+.+.+|+.. +.+++ .. .| +--..+.+.+.-....+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~ 163 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 163 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence 456788888887764 899999999999999999999862 22322 11 11 11233444454455789
Q ss_pred EEEcCCcccHHHHHhCCee-EEecCchH-------HHHhh-cCEEEeCCChhHHHHHH
Q 002354 787 AMVGDGINDAAALASSHIG-VAMGGGVG-------AASEV-ASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 787 ~~vGDg~ND~~al~~A~vg-Ia~~~~~~-------~a~~~-ad~vl~~~~~~~i~~~i 835 (932)
++|||+.||++|++.|+++ |+++++.. ..++. ||+++. ++..+..++
T Consensus 164 i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 164 VVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 9999999999999999998 77765543 36666 999984 566676655
No 139
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.91 E-value=1.8e-05 Score=82.59 Aligned_cols=115 Identities=14% Similarity=0.108 Sum_probs=81.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CCceecc-cChhh--H----HHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP-KDKVLSG-VKPNE--K----KRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~-~~~v~~~-~~p~~--K----~~~v~~l~~~g~~v~~vG 790 (932)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+. .+.+++. ..+.. | ....+.+.-....++|||
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vG 189 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIG 189 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEc
Confidence 35688999999999999999999999888889999999874 2233332 21111 2 334444544567899999
Q ss_pred CCcccHHHHHhCCee---EEecCch-HHHH-hhcCEEEeCCChhHHHHHH
Q 002354 791 DGINDAAALASSHIG---VAMGGGV-GAAS-EVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 791 Dg~ND~~al~~A~vg---Ia~~~~~-~~a~-~~ad~vl~~~~~~~i~~~i 835 (932)
|+.||+.|.+.|++. +++|.+. +..+ ..+|+++. ++..+...+
T Consensus 190 Ds~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 190 DSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp SSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 999999999999994 3444333 3333 36898884 677666554
No 140
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.87 E-value=1.9e-05 Score=79.90 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=81.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+.. +.+++. .. |+--..+.+.+. ...++||
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~v 149 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLV 149 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEE
Confidence 56789999 9999999 9999999999999999999999852 233321 12 222244455555 5679999
Q ss_pred cCCcccHHHHHhCCeeEEe----cCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAM----GGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~----~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+.||+.|.+.|++..++ ++..+.....+|+++. ++..+..++
T Consensus 150 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 150 SSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp ESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred eCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 9999999999999999777 3333333456898874 677776655
No 141
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.86 E-value=1.4e-05 Score=81.71 Aligned_cols=113 Identities=16% Similarity=0.216 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceeccc-ChhhHHHHHHHH-hh---CCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGV-KPNEKKRFINEL-QN---DENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~-~p~~K~~~v~~l-~~---~g~~v~~vGD 791 (932)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+.. +.+++.- .+.-|.++++.+ ++ ....++||||
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgD 162 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECC
Confidence 467999999999999 99999999988888899999999852 2333221 112244444433 33 3467999999
Q ss_pred CcccHHHHHhCCe---eEEecCc-hHHHH-hhcCEEEeCCChhHHHHH
Q 002354 792 GINDAAALASSHI---GVAMGGG-VGAAS-EVASVVLMGNRLSQLLVA 834 (932)
Q Consensus 792 g~ND~~al~~A~v---gIa~~~~-~~~a~-~~ad~vl~~~~~~~i~~~ 834 (932)
+.||+.|.+.|++ ++++|++ .+..+ ..+|+++. ++..+..+
T Consensus 163 s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 9999999999999 6666655 33444 35899885 45555443
No 142
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=1.8e-05 Score=81.16 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=82.5
Q ss_pred cccHHHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCC--CceecccCh--hhHHHHHHHHhhCCCEEEEEcCCc
Q 002354 719 RIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKP--NEKKRFINELQNDENVVAMVGDGI 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~~p--~~K~~~v~~l~~~g~~v~~vGDg~ 793 (932)
.+.+++.+.++.|++.| +++.++|+........+.+.+|+.. +.++..-.| +--..+.+.+.-....+++|||+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~ 184 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLMVGNSF 184 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEEECCCc
Confidence 56789999999999999 9999999999888899999999852 234433333 222334444444557899999996
Q ss_pred -ccHHHHHhCCeeEEe-------cCchHHHHhhc-CEEEeCCChhHHHHHH
Q 002354 794 -NDAAALASSHIGVAM-------GGGVGAASEVA-SVVLMGNRLSQLLVAL 835 (932)
Q Consensus 794 -ND~~al~~A~vgIa~-------~~~~~~a~~~a-d~vl~~~~~~~i~~~i 835 (932)
||+.|.+.|++++++ |++....+..+ |+++ +++..+..++
T Consensus 185 ~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 185 KSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp CCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred HHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 999999999999887 23333333444 7777 4677776653
No 143
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.85 E-value=1.9e-05 Score=84.58 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=78.2
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCC-Cceec-cc------ChhhHHHHHHHHhh-------C
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPK-DKVLS-GV------KPNEKKRFINELQN-------D 782 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~-~~v~~-~~------~p~~K~~~v~~l~~-------~ 782 (932)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.. +.+++ .. .|+--..+.+.+.- .
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~ 193 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPS 193 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGG
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCC
Confidence 3578999999999999 99999999999999999999999852 22322 21 12222334444444 4
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEe---cCchHHHHh-hcCEEEeC
Q 002354 783 ENVVAMVGDGINDAAALASSHIGVAM---GGGVGAASE-VASVVLMG 825 (932)
Q Consensus 783 g~~v~~vGDg~ND~~al~~A~vgIa~---~~~~~~a~~-~ad~vl~~ 825 (932)
...+++|||+.||++|++.|++++++ +++.+..++ .||+++.+
T Consensus 194 ~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 194 KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 56799999999999999999987666 444444444 58998853
No 144
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.84 E-value=2.6e-05 Score=80.54 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccC----h--hhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVK----P--NEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~----p--~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|+ .|++++++|+........+.+.+|+.. +.++ +... | +--..+.+.+.-....+++|
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 46789999999999 999999999999999999999999852 1222 2221 1 11223333333345689999
Q ss_pred cCCc-ccHHHHHhCCeeEEecCchH--HHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAMGGGVG--AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~~~~~~--~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||+. ||+.|.+.|++++++.+... ..+..+|+++. ++..+..+.
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~ 232 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL 232 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence 9995 99999999999999975433 55567999995 677666553
No 145
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.82 E-value=2.9e-05 Score=80.05 Aligned_cols=115 Identities=10% Similarity=0.116 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-------cChhhHHHH---HHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------VKPNEKKRF---INELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-------~~p~~K~~~---v~~l~~~g~~v~~ 788 (932)
++.+++.+.++.|++ |+++.++|+..........+.++-..+.+++. -.|+-.... .+.+.-....++|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~ 177 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILH 177 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEE
Confidence 578999999999999 89999999999888888777766433344332 223322344 3333334567999
Q ss_pred EcCCc-ccHHHHHhCCeeEEecCch-----------HHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGI-NDAAALASSHIGVAMGGGV-----------GAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vgIa~~~~~-----------~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+. ||+.|.+.|+++++|.+.. +..+..+|+++. ++..+.++++
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l~ 235 (240)
T 3smv_A 178 TAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAHK 235 (240)
T ss_dssp EESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHHH
T ss_pred ECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHHH
Confidence 99996 9999999999999995322 233478999984 7887777765
No 146
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.80 E-value=3.6e-05 Score=79.38 Aligned_cols=115 Identities=15% Similarity=0.236 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cccChhhH--HHHHH----HHh-hCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SGVKPNEK--KRFIN----ELQ-NDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K--~~~v~----~l~-~~g~~v~~ 788 (932)
.+.|++.+.++.|++. +++.++|+.....+....+.+|+.. +.++ +...+..| ...++ .+. -....+++
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEE
Confidence 5678999999999999 9999999999999999999999852 1222 22211122 33333 333 23357999
Q ss_pred EcCCc-ccHHHHHhCCee-EEecCc--hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 789 VGDGI-NDAAALASSHIG-VAMGGG--VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 789 vGDg~-ND~~al~~A~vg-Ia~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|||+. ||+.|.+.|+++ |.+..+ .+..+..+|+++. ++..+.++++
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 99998 999999999995 444433 5566678999984 7888877764
No 147
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=97.80 E-value=6.3e-05 Score=79.89 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=47.1
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- .+.+-++++++|++|+++|++++++|| ++........+++|++
T Consensus 8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 56788888998764 566778999999999999999999999 6777777777777763
No 148
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.79 E-value=3.5e-05 Score=81.10 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=84.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-cc------ChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GV------KPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~------~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+.. +.+++ .. .|+--..+.+.+.-....++||
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 170 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 57799999999999 99999999999999999999999852 22222 21 2223344445554455679999
Q ss_pred cCCcccHHHHHhCCeeEEecCc---------------------------hHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIGVAMGGG---------------------------VGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~~---------------------------~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+.||+.|.+.|++..++.+. .+..+..+|+++ +++..+..+++
T Consensus 171 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 242 (253)
T 1qq5_A 171 SSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (253)
T ss_dssp ESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred eCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee--CCHHHHHHHHH
Confidence 9999999999999999988654 122345689888 46777777654
No 149
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.78 E-value=6.7e-05 Score=75.55 Aligned_cols=123 Identities=19% Similarity=0.149 Sum_probs=90.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCC--Cceecc-----------cChhhHHHHHHHHhhC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---NSAEYVASLVGIPK--DKVLSG-----------VKPNEKKRFINELQND 782 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---~~a~~ia~~~gi~~--~~v~~~-----------~~p~~K~~~v~~l~~~ 782 (932)
++.|++.++++.|+++|++++++|+... ..+..+.+.+|+.. +.+++. -.|+--..+.+.+.-.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 113 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID 113 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence 5789999999999999999999998776 88999999999853 123221 1223334455555555
Q ss_pred CCEEEEEcCC-cccHHHHHhCCeeEEe-cCchH-----HHH-hhcCEEEeCCChhHHHHHHHHHHHH
Q 002354 783 ENVVAMVGDG-INDAAALASSHIGVAM-GGGVG-----AAS-EVASVVLMGNRLSQLLVALELSRLT 841 (932)
Q Consensus 783 g~~v~~vGDg-~ND~~al~~A~vgIa~-~~~~~-----~a~-~~ad~vl~~~~~~~i~~~i~~gR~~ 841 (932)
...++||||. .+|+.+-+.|++.... .++.. ... ..+|.++...++..+.+++++.+.-
T Consensus 114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~~ 180 (189)
T 3ib6_A 114 KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKKI 180 (189)
T ss_dssp GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHHH
T ss_pred cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHHh
Confidence 6789999999 7999999999997444 33221 111 2679999777899999999886653
No 150
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.78 E-value=5e-05 Score=75.63 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=70.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceecc-----cC--hhhHHHHHHHHhhCCCEEEEEc
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----VK--PNEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~~-----~~--p~~K~~~v~~l~~~g~~v~~vG 790 (932)
+.|++.+.++.|++.|++++++|+... .+..+.+.+|+... .+++. -. |+--..+.+.+.-. .+++||
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iG 159 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIG 159 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEc
Confidence 578999999999999999999998764 57788888998531 22221 11 22223333333323 799999
Q ss_pred CCcccHHHHHhCCeeEEecCchHHHHhhcC
Q 002354 791 DGINDAAALASSHIGVAMGGGVGAASEVAS 820 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~~~~~~~a~~~ad 820 (932)
|+.||.+|++.|++++++.+.....++..+
T Consensus 160 D~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 160 DRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp SSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 999999999999999888766666666554
No 151
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.78 E-value=3.1e-05 Score=77.81 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=67.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCceecc--cChhhHHHHH----HHHhhCCCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSG--VKPNEKKRFI----NELQNDENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~v~~~--~~p~~K~~~v----~~l~~~g~~v~~vGD 791 (932)
++.|++.+++++|++.|++++++||.+ ...+..+.+.+|+.. .|.. ..+..|.+.+ +.+.-....++||||
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD 145 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR--YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDD 145 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT--TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh--hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeC
Confidence 568999999999999999999999998 799999999999973 2222 1233443333 333334567999999
Q ss_pred CcccHHHHHhCCeeEE
Q 002354 792 GINDAAALASSHIGVA 807 (932)
Q Consensus 792 g~ND~~al~~A~vgIa 807 (932)
+.||+.+.+.|++...
T Consensus 146 ~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 146 ERRNIVDVSKLGVTCI 161 (187)
T ss_dssp CHHHHHHHHTTTCEEE
T ss_pred CccChHHHHHcCCEEE
Confidence 9999999999998643
No 152
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.74 E-value=1.3e-05 Score=83.96 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=76.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--Ccee-cc--cChhhH--HHHHHH-Hhh---CC--C
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVL-SG--VKPNEK--KRFINE-LQN---DE--N 784 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~--~~v~-~~--~~p~~K--~~~v~~-l~~---~g--~ 784 (932)
.+.+++.+.++.|++.|+++.++|+...........+ .|+.. +.++ +. ..+..| .++++. +++ .. .
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 191 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME 191 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGG
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcc
Confidence 5788999999999999999999999987665543322 34321 1222 22 112122 223332 223 23 7
Q ss_pred EEEEEcCCcccHHHHHhCC---eeEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 785 VVAMVGDGINDAAALASSH---IGVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 785 ~v~~vGDg~ND~~al~~A~---vgIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
.+++|||+.||+.|.+.|+ ++++++++.+..+..||+++. ++..+
T Consensus 192 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 192 KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGC
T ss_pred eEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHh
Confidence 8999999999999999999 555667777778889999985 55544
No 153
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.70 E-value=6.5e-05 Score=79.76 Aligned_cols=57 Identities=12% Similarity=0.202 Sum_probs=46.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- .+.+-++++++|++|+++|++++++|| ++........+++|++
T Consensus 6 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSSTTC----HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 46788888988753 366778999999999999999999988 7777777777788774
No 154
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.66 E-value=4.6e-05 Score=80.83 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=84.7
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.. +.+++. -.|+--..+.+.+.-....++||
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~v 184 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHV 184 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 36799999999999999999999987664 688889999852 122221 22333445556665566789999
Q ss_pred cCCc-ccHHHHHhCCeeEEecCchHH------HHhhcCEEEeCCChhHHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAMGGGVGA------ASEVASVVLMGNRLSQLLVALEL 837 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~~~~~~~------a~~~ad~vl~~~~~~~i~~~i~~ 837 (932)
||+. ||+.|.+.|++++++.+.... ....+|+++. ++..+..+++.
T Consensus 185 GD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 185 GDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp ESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred CCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 9997 999999999999999632211 2236898884 77777777653
No 155
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=97.65 E-value=3.2e-05 Score=72.76 Aligned_cols=102 Identities=16% Similarity=0.115 Sum_probs=73.0
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-----cC--hhh
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VK--PNE 771 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-----~~--p~~ 771 (932)
.+.+..|+++ .-..++.|++.++++.|+++|++++++|+.+...+..+.+.+|+.. +.+++. -. |+-
T Consensus 4 ~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~ 79 (137)
T 2pr7_A 4 GLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAA 79 (137)
T ss_dssp EEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHH
T ss_pred EEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHH
Confidence 4555566655 1234578999999999999999999999999888888888888753 233321 22 222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
-..+.+.+.-....++||||+.+|+.+.+.+++-.
T Consensus 80 ~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 80 FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 23344444434457999999999999999999853
No 156
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=97.50 E-value=0.00024 Score=71.32 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=70.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
.+.|++.+.++.|++.| +++++|+.+......+.+.+|+.. +.++.. -.|+--..+.+.+.-....++||
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 164 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV 164 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence 36799999999999999 999999999999999999999852 223221 12333344555555556789999
Q ss_pred cCCcccHHHHHhCCeeEEecC
Q 002354 790 GDGINDAAALASSHIGVAMGG 810 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~~~ 810 (932)
||+.||+.|.+.|++...+-+
T Consensus 165 gD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 165 DDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp ESCHHHHHHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHCCCEEEEEC
Confidence 999999999999999987753
No 157
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.49 E-value=7.6e-05 Score=75.72 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=70.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCC--Cceecc-----c--ChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL------VGIPK--DKVLSG-----V--KPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~--~~v~~~-----~--~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.++.|++ |++++++|+........+.+. +|+.. +.+++. . .|+--..+.+.+.-..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 467999999999999 999999999998888888887 68742 233321 1 2223344555555456
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCch
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGV 812 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~ 812 (932)
..+++|||+.||+.|.+.|+++.++.+..
T Consensus 168 ~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 168 EETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred HHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 78999999999999999999999987543
No 158
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.45 E-value=0.0004 Score=72.63 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--CceecccCh--hhHHHHHHHHhhCCCEEEEEcCCc-
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSGVKP--NEKKRFINELQNDENVVAMVGDGI- 793 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~~~p--~~K~~~v~~l~~~g~~v~~vGDg~- 793 (932)
.+.+++.+.++.|+ .|+++.++|+..........+.+|+.. +.+++.-.| +--..+.+.+.-....+++|||+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~ 190 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLR 190 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCch
Confidence 45799999999999 999999999999998999999999852 234443333 333445555555567899999999
Q ss_pred ccHHHHHhCCeeEEec-CchH--------HHHhhcCE-EEeCCChhHHHHHHH
Q 002354 794 NDAAALASSHIGVAMG-GGVG--------AASEVASV-VLMGNRLSQLLVALE 836 (932)
Q Consensus 794 ND~~al~~A~vgIa~~-~~~~--------~a~~~ad~-vl~~~~~~~i~~~i~ 836 (932)
||+.|.+.|++++++- .+.. .....+|+ ++ +++..+..+++
T Consensus 191 ~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 191 SDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp CCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred hhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 9999999999997763 2221 11245787 55 46887777664
No 159
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.39 E-value=8.4e-05 Score=78.44 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=41.1
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 757 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g 757 (932)
..+++..||+++- -+.++.+.+.++|++|+++|++++++||++... +.+.++
T Consensus 5 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~ 56 (246)
T 3f9r_A 5 VLLLFDVDGTLTP---PRLCQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLG 56 (246)
T ss_dssp EEEEECSBTTTBS---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHC
T ss_pred eEEEEeCcCCcCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhh
Confidence 5666667777652 244688999999999999999999999999885 455555
No 160
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.39 E-value=0.00066 Score=69.10 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=80.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Ccee-cc------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~-~~------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.. +.++ +. -.|+-=....+.+.-..+.++||
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEE
Confidence 457899999999999999999999999999999999999863 1121 11 22333345556665566789999
Q ss_pred cCCcccHHHHHhCCee-E-Ee--c-CchHHHHhh-cCEEEeCCChhHHHHHHH
Q 002354 790 GDGINDAAALASSHIG-V-AM--G-GGVGAASEV-ASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~ND~~al~~A~vg-I-a~--~-~~~~~a~~~-ad~vl~~~~~~~i~~~i~ 836 (932)
||..+|+.+-+.|++. | ++ | +..+...++ ++.+. +...+.+.++
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~---~~~eli~~l~ 213 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV---KPEEILNVLK 213 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE---CGGGHHHHHH
T ss_pred ecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC---CHHHHHHHHH
Confidence 9999999999999985 2 23 3 333444444 45554 2444555443
No 161
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=97.28 E-value=0.00031 Score=72.34 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=66.8
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCcee-ccc------------Ch
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVL-SGV------------KP 769 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~v~-~~~------------~p 769 (932)
.++.|++.+++++|+++|++++++|+... ..+..+.+++|+..+.++ +.. ..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~ 134 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 134 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCc
Confidence 46789999999999999999999999887 678888999997533433 311 11
Q ss_pred hhH------HHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 770 NEK------KRFINELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 770 ~~K------~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
..| ..+.+.+.-....++||||+.||+.+.+.|++..
T Consensus 135 ~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 112 2333444444567999999999999999999864
No 162
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=97.23 E-value=0.0014 Score=66.42 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=75.4
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc-c----Ch--hhHHHHHHHHhhCC-CEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-V----KP--NEKKRFINELQNDE-NVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-~----~p--~~K~~~v~~l~~~g-~~v~~vG 790 (932)
++.|++.++++.|+++|+++.++||.....+..+.+ ...+.+++. - .| +--....+.+.-.. ..++|||
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VG 112 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLIS 112 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEe
Confidence 467999999999999999999999999888766554 212234332 1 22 21123333333222 5699999
Q ss_pred CCcccHHHHHhCCe-eEEecCch--------------------------HH-HHhhcCEEEeCCChhHHHHHHH
Q 002354 791 DGINDAAALASSHI-GVAMGGGV--------------------------GA-ASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 791 Dg~ND~~al~~A~v-gIa~~~~~--------------------------~~-a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
|..+|+.+-+.|++ .|++..+. +. ....+|+++ +++..+..++.
T Consensus 113 Ds~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 113 GDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI--DHLGELESCLA 184 (196)
T ss_dssp SCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe--CCHHHHHHHHH
Confidence 99999999999998 45564321 01 123589888 46887777654
No 163
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=97.19 E-value=0.00068 Score=69.40 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=76.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceecc-------cChhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-------VKPNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++. +++.++|+.+.. .+.+|+.. +.+++. -.|+--..+.+.+.-....++||
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV 178 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence 4678999999999998 999999987654 35667642 222221 12222344555555556789999
Q ss_pred cCCc-ccHHHHHhCCeeEEe---c-CchHHHHhhcCEEEeCCChhHHHHHHH
Q 002354 790 GDGI-NDAAALASSHIGVAM---G-GGVGAASEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 790 GDg~-ND~~al~~A~vgIa~---~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 836 (932)
||+. ||+.|.+.|+++.++ + +..+. ...+|+++. ++..+.++++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 179 GDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred eCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 9997 999999999999887 2 22223 667899884 7888877764
No 164
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.18 E-value=8.9e-05 Score=74.78 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=66.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC--Cceecc-----c--ChhhHHHHHHHHhhCCCEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK--DKVLSG-----V--KPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~--~~v~~~-----~--~p~~K~~~v~~l~~~g~~v~~ 788 (932)
++.|++.+.++.|++.|++++++|+.+......+.+. +|+.. +.+++. . .|+--..+.+.+.-....++|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 5689999999999999999999998776654443333 34321 133321 1 233344555666555678999
Q ss_pred EcCCcccHHHHHhCCeeEEecCchH
Q 002354 789 VGDGINDAAALASSHIGVAMGGGVG 813 (932)
Q Consensus 789 vGDg~ND~~al~~A~vgIa~~~~~~ 813 (932)
|||+.||+.|.+.|++...+.+..+
T Consensus 171 vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 171 FDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp EESCHHHHHHHHTTTCEEEECCSTT
T ss_pred eCCCHHHHHHHHHcCCeEEEecCCc
Confidence 9999999999999999988764433
No 165
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=97.18 E-value=0.001 Score=70.33 Aligned_cols=114 Identities=16% Similarity=0.202 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cce-eccc----C--hhhHHHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSGV----K--PNEKKRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v-~~~~----~--p~~K~~~v~~l~~~g~~v~~v 789 (932)
++.|++.++++.|++ ++++.++|+.+...+..+.+.+|+.. +.+ .+.. . |+--..+.+.+.-....++||
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v 199 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 199 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 567999999999998 59999999999999999999999852 222 2222 1 222244445555456789999
Q ss_pred cCC-cccHHHHHhCCe--eEEecCchH---HHHhhcCEEEeCCChhHHHHHH
Q 002354 790 GDG-INDAAALASSHI--GVAMGGGVG---AASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 790 GDg-~ND~~al~~A~v--gIa~~~~~~---~a~~~ad~vl~~~~~~~i~~~i 835 (932)
||. .||+.+-+.|++ .|.+..+.. .....+|+++. ++..+..++
T Consensus 200 GDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 200 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred CCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 995 999999999999 677754321 12345888874 677776655
No 166
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=97.13 E-value=0.0011 Score=74.23 Aligned_cols=115 Identities=21% Similarity=0.291 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--C--ceecc----------------cChhhHHHHHHH
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D--KVLSG----------------VKPNEKKRFINE 778 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~--~v~~~----------------~~p~~K~~~v~~ 778 (932)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. + .+++. -.|.- .-+...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P-~~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNP-FSYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTST-HHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCH-HHHHHH
Confidence 678999999999999999999999999999999999999863 1 33331 12211 112223
Q ss_pred Hhh-----------------CCCEEEEEcCCcccHHHHHhCCee-EEecCch------HHH-HhhcCEEEeCCChhHHHH
Q 002354 779 LQN-----------------DENVVAMVGDGINDAAALASSHIG-VAMGGGV------GAA-SEVASVVLMGNRLSQLLV 833 (932)
Q Consensus 779 l~~-----------------~g~~v~~vGDg~ND~~al~~A~vg-Ia~~~~~------~~a-~~~ad~vl~~~~~~~i~~ 833 (932)
+++ ....++||||+.+|+.+-++|++. |.+..+. +.. ...+|+++. ++..+..
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~--sl~eL~~ 371 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRG 371 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEEC--CHHHHHH
Confidence 333 236799999999999999999986 4444331 222 346899884 6887776
Q ss_pred HHH
Q 002354 834 ALE 836 (932)
Q Consensus 834 ~i~ 836 (932)
+++
T Consensus 372 ~l~ 374 (384)
T 1qyi_A 372 VLD 374 (384)
T ss_dssp HHS
T ss_pred HHH
Confidence 654
No 167
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=97.10 E-value=0.0016 Score=68.97 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=47.6
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
....+.+..||+++- .+++.+++.+++++|+++|++++++| |+.........+++|++
T Consensus 16 ~~~~v~~DlDGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 16 KIELFILDMDGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp GCCEEEECCBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCCEEEEcCcCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 345677778888763 26778999999999999999999999 88888887777777764
No 168
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.05 E-value=0.00047 Score=71.02 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=71.5
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCCC--Cceecc-------cChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA------SLVGIPK--DKVLSG-------VKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia------~~~gi~~--~~v~~~-------~~p~~K~~~v~~l~~~g 783 (932)
++.|++.+.++.|++. +++.++|+.+......+. +.+|+.. +.+++. -.|+--..+.+.+.-..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 3569999999999999 999999999998888766 4456531 123221 22333345556665566
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCchHHHH
Q 002354 784 NVVAMVGDGINDAAALASSHIGVAMGGGVGAAS 816 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~~A~vgIa~~~~~~~a~ 816 (932)
..++||||+.||+.|.+.|+++.++.+..+..+
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 789999999999999999999998875544333
No 169
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=97.03 E-value=0.0002 Score=76.08 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=48.2
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcccHHHHHhCC-eeEEecCchHHHHhhcCEEEeCCCh
Q 002354 771 EKKRFINEL-QNDENVVAMVGD----GINDAAALASSH-IGVAMGGGVGAASEVASVVLMGNRL 828 (932)
Q Consensus 771 ~K~~~v~~l-~~~g~~v~~vGD----g~ND~~al~~A~-vgIa~~~~~~~a~~~ad~vl~~~~~ 828 (932)
+|..-++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+.+++.||+|+.+++-
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC--
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcC
Confidence 587777777 112468999999 999999999999 6999999999999999999876553
No 170
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=96.87 E-value=0.0007 Score=71.45 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=66.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCC---ceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPKD---KVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~---~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
.++.|++.+.++.|++.|+++.++||++. ..+....+++||+.. .++-+-....|....+.+++.| ..|++|
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~i 179 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFV 179 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEE
Confidence 46788999999999999999999999965 477788889999741 3554434567888888888854 578999
Q ss_pred cCCcccHHH
Q 002354 790 GDGINDAAA 798 (932)
Q Consensus 790 GDg~ND~~a 798 (932)
||..+|.++
T Consensus 180 GD~~~Dl~~ 188 (260)
T 3pct_A 180 GDNLNDFGD 188 (260)
T ss_dssp ESSGGGGCG
T ss_pred CCChHHcCc
Confidence 999999876
No 171
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=96.87 E-value=0.0019 Score=68.28 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=45.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
...+++..||+++- -...+ ++++++|++++++|++++++| |++........+++|+.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 5 YKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45677777887653 23445 899999999999999999999 88888888888888874
No 172
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=96.85 E-value=0.00058 Score=72.17 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=66.0
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCC-C--ceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPK-D--KVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~-~--~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
+++.|++.+.++.|++.|++++++||++. ..+..-.+++||+. + .++-+-....|....+.+.+.| ..|++|
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~v 179 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYV 179 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEEE
Confidence 56789999999999999999999999865 47777888999984 2 5555544467888888888874 578999
Q ss_pred cCCcccHHH
Q 002354 790 GDGINDAAA 798 (932)
Q Consensus 790 GDg~ND~~a 798 (932)
||..+|.++
T Consensus 180 GD~~~Dl~~ 188 (262)
T 3ocu_A 180 GDNLDDFGN 188 (262)
T ss_dssp ESSGGGGCS
T ss_pred CCChHHhcc
Confidence 999999865
No 173
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=96.73 E-value=0.0013 Score=73.31 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=64.8
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-----cCCCC-CceecccChhhHHH----HHHHHhhCCCEEEEE
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-----VGIPK-DKVLSGVKPNEKKR----FINELQNDENVVAMV 789 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-----~gi~~-~~v~~~~~p~~K~~----~v~~l~~~g~~v~~v 789 (932)
+-+++++.++.|+++|+++.++|+.+...+..+.++ +++.. ..++... +.|.+ +.+.+.-..+.++||
T Consensus 257 ~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~--KPKp~~l~~al~~Lgl~pee~v~V 334 (387)
T 3nvb_A 257 AFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANW--ENKADNIRTIQRTLNIGFDSMVFL 334 (387)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEES--SCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccCccEEEeCC--CCcHHHHHHHHHHhCcCcccEEEE
Confidence 458999999999999999999999999999999988 44421 1233333 33444 344444445789999
Q ss_pred cCCcccHHHHHhCCeeEEe
Q 002354 790 GDGINDAAALASSHIGVAM 808 (932)
Q Consensus 790 GDg~ND~~al~~A~vgIa~ 808 (932)
||..+|.++.++|--||.+
T Consensus 335 GDs~~Di~aaraalpgV~v 353 (387)
T 3nvb_A 335 DDNPFERNMVREHVPGVTV 353 (387)
T ss_dssp CSCHHHHHHHHHHSTTCBC
T ss_pred CCCHHHHHHHHhcCCCeEE
Confidence 9999999999999444443
No 174
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=96.72 E-value=0.0038 Score=65.40 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=77.6
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-------ccChhhHHHHHHHHhhCCCEEE
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-------GVKPNEKKRFINELQNDENVVA 787 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-------~~~p~~K~~~v~~l~~~g~~v~ 787 (932)
..++.|++.+.++.|++.|+++.+.|... .+..+.+.+|+.. +.+++ .-.|+-=....+.+.-..+.++
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 34678999999999999999998877654 3567788899853 12221 1223333455666665667899
Q ss_pred EEcCCcccHHHHHhCCe-eEEecCchHHHHhhcCEEEeCCChhHH
Q 002354 788 MVGDGINDAAALASSHI-GVAMGGGVGAASEVASVVLMGNRLSQL 831 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~v-gIa~~~~~~~a~~~ad~vl~~~~~~~i 831 (932)
||||..+|+.+-+.|++ .|++++..+ ...||+++. ++..+
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEES--SGGGC
T ss_pred EECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEEC--ChHhC
Confidence 99999999999999998 566764433 246899885 55554
No 175
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=96.67 E-value=0.0021 Score=70.45 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=74.9
Q ss_pred EEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCceeccc---------------------
Q 002354 713 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGV--------------------- 767 (932)
Q Consensus 713 ~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~v~~~~--------------------- 767 (932)
.-.....+.++.++.++.|+++|++|+|+||-+...++.+|.. .||++++|++-.
T Consensus 137 ~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg 216 (327)
T 4as2_A 137 LDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEG 216 (327)
T ss_dssp EEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTT
T ss_pred ccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccc
Confidence 3345567899999999999999999999999999999999998 588887776521
Q ss_pred ---------------------ChhhHHHHHHHHhhCC-CEEEEEcCC-cccHHHHHh--CCeeEEe
Q 002354 768 ---------------------KPNEKKRFINELQNDE-NVVAMVGDG-INDAAALAS--SHIGVAM 808 (932)
Q Consensus 768 ---------------------~p~~K~~~v~~l~~~g-~~v~~vGDg-~ND~~al~~--A~vgIa~ 808 (932)
.-+.|...|+....+| ..++++||+ ..|.+||.. ++.|+.+
T Consensus 217 ~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 217 KYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 1245888887765444 468999999 589999965 4444444
No 176
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=96.65 E-value=0.0005 Score=72.14 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=42.3
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcccHHHHHhCCe-eEEecCchHHHHhhcCEE
Q 002354 771 EKKRFINEL-QNDENVVAMVGD----GINDAAALASSHI-GVAMGGGVGAASEVASVV 822 (932)
Q Consensus 771 ~K~~~v~~l-~~~g~~v~~vGD----g~ND~~al~~A~v-gIa~~~~~~~a~~~ad~v 822 (932)
+|..-++.| .-....|+++|| +.||.+||+.|+. |++|+|+.+.+|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 576666666 223468999999 9999999999988 999999999999999876
No 177
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=96.63 E-value=0.00065 Score=67.55 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=66.2
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCcee-c-----cc----Chh--h
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-S-----GV----KPN--E 771 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~v~-~-----~~----~p~--~ 771 (932)
++.|++.++++.|+++|++++++|+. ....+..+.+.+|+..+.++ + .- .|+ -
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~ 121 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 121 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSCGG
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCCcccccccCCCHHH
Confidence 57899999999999999999999987 46778889999999744443 3 11 121 1
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcccHHHHHhCCee-EEecCc
Q 002354 772 KKRFINELQNDENVVAMVGDGINDAAALASSHIG-VAMGGG 811 (932)
Q Consensus 772 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vg-Ia~~~~ 811 (932)
=..+.+.+.-....++||||..+|+.+-+.|++- |.+..+
T Consensus 122 ~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 122 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 1222334433456799999999999999999986 444433
No 178
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=96.60 E-value=0.016 Score=60.42 Aligned_cols=61 Identities=10% Similarity=0.017 Sum_probs=46.1
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
...+.+..||+++---.-.+.+.+.+.++++.+++.|+++.++| |++........+++|++
T Consensus 12 ~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp CCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 46777888887763100023366888999999999999999999 99988888877777763
No 179
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=96.55 E-value=0.0008 Score=69.56 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=76.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc--ChhhHHHHHHHHh--hCCCEEEEEcCCc
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEKKRFINELQ--NDENVVAMVGDGI 793 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~--~p~~K~~~v~~l~--~~g~~v~~vGDg~ 793 (932)
-++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+.. .|... ....|..+++.+. -....++||||+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~--~f~~~~~~~~~K~~~~~~~~~~~~~~~~~~vgDs~ 171 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD--EVEGRVLIYIHKELMLDQVMECYPARHYVMVDDKL 171 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH--HTTTCEEEESSGGGCHHHHHHHSCCSEEEEECSCH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH--hcCeeEEecCChHHHHHHHHhcCCCceEEEEcCcc
Confidence 367899999999999999 999999999999999999999842 11110 1123333333333 3457899999999
Q ss_pred c---cHHHHHhCCee-EEecCc-----hHHHHhh--cCEEEeCCChhHHHHHH
Q 002354 794 N---DAAALASSHIG-VAMGGG-----VGAASEV--ASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 794 N---D~~al~~A~vg-Ia~~~~-----~~~a~~~--ad~vl~~~~~~~i~~~i 835 (932)
| |..+-+.|++- |.+..+ .+..++. +|+++. ++..+..++
T Consensus 172 ~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 172 RILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred chhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 9 66666778865 344332 2233343 898884 566655443
No 180
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=96.44 E-value=0.0055 Score=66.15 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=69.2
Q ss_pred ecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCCCCceecc------cChhhHHHHHHH
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSA---EYVASL--------VGIPKDKVLSG------VKPNEKKRFINE 778 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~v~~~------~~p~~K~~~v~~ 778 (932)
.++++.|++.++++.|+++|+++.++||.+...+ ...-+. +|+..+.++.. -.|+-|..+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeeccCCCCcHHHHHHHHHHHH
Confidence 4567899999999999999999999999985432 344445 78854444432 224556667777
Q ss_pred HhhCCCE-EEEEcCCcccHHHHHhCCee-EEecCc
Q 002354 779 LQNDENV-VAMVGDGINDAAALASSHIG-VAMGGG 811 (932)
Q Consensus 779 l~~~g~~-v~~vGDg~ND~~al~~A~vg-Ia~~~~ 811 (932)
+...... ++||||..+|+.|-+.|++- |++..|
T Consensus 265 ~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 7544434 68999999999999999986 444333
No 181
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=96.09 E-value=0.0034 Score=66.51 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=54.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC--C--CceecccChhhHHHHHHHHhhCC-CEEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIP--K--DKVLSGVKPNEKKRFINELQNDE-NVVAMV 789 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~--~--~~v~~~~~p~~K~~~v~~l~~~g-~~v~~v 789 (932)
.++.|++.++|+.|++.|+++.++||+. ........+.+|+. . +.+.+.-.+ .|......+.+.+ ..++||
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-~K~~~~~~~~~~~~~~~l~V 178 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-KGKEKRRELVSQTHDIVLFF 178 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-CSSHHHHHHHHHHEEEEEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-CCcHHHHHHHHhCCCceEEe
Confidence 4678999999999999999999999998 44555666788987 1 233332211 1211222222222 358899
Q ss_pred cCCcccHHHH
Q 002354 790 GDGINDAAAL 799 (932)
Q Consensus 790 GDg~ND~~al 799 (932)
||..||+.+-
T Consensus 179 GDs~~Di~aA 188 (258)
T 2i33_A 179 GDNLSDFTGF 188 (258)
T ss_dssp ESSGGGSTTC
T ss_pred CCCHHHhccc
Confidence 9999998765
No 182
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=96.06 E-value=0.015 Score=57.38 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHHhc---ccCCCcHHHHHHHHHHhcCCccccccCCCeEEec---CCeeEEE-E---cCe--EEEeecH
Q 002354 608 HPLSETEILKFAAGVE---SNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP---GSGTVAI-I---EDR--KVSVGTI 675 (932)
Q Consensus 608 ~~~~~~~ll~laa~~e---~~s~hPi~~Ai~~~a~~~~~~~~~~~~~~~~~~~---g~g~~~~-i---~~~--~~~~Gs~ 675 (932)
.+.++++++.+++... ....+|++.||++++...+............++| .+..+.+ + ++. .++||++
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 3455677888776554 3467999999998765422110000111122222 2333322 2 122 4899999
Q ss_pred HHHhhcCCCCc---------------hhhhHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccc
Q 002354 676 DWLRSHGVDTS---------------TFQEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDR 719 (932)
Q Consensus 676 ~~i~~~~~~~~---------------~~~~~~~~~~~g~~~~~va~----------------~~~~lG~i~l~D~ 719 (932)
+.+.+.|.... .....+.+..+|.+++.+++ |++|+|+++|-|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 99999886320 01122336778999999885 5689999999885
No 183
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=95.83 E-value=0.0097 Score=61.10 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=35.5
Q ss_pred HHHHHhhCCCEEEEEcCC-cccHHHHHhCCeeEEe---cCch-HHHH---hhcCEEEe
Q 002354 775 FINELQNDENVVAMVGDG-INDAAALASSHIGVAM---GGGV-GAAS---EVASVVLM 824 (932)
Q Consensus 775 ~v~~l~~~g~~v~~vGDg-~ND~~al~~A~vgIa~---~~~~-~~a~---~~ad~vl~ 824 (932)
+.+.+.-....+++|||+ .||++|++.|++++++ |++. +..+ ..+|+++.
T Consensus 185 ~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 185 ALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 334444345689999999 7999999999999554 4433 3333 46898885
No 184
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=95.36 E-value=0.0099 Score=60.61 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--Cceec-ccChhhH------HHHHHHHhhCCCEEEEE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVKPNEK------KRFINELQNDENVVAMV 789 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~~v~~-~~~p~~K------~~~v~~l~~~g~~v~~v 789 (932)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.. +.+++ ......| ..+.+.+.-. . +||
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~--~-~~v 170 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP--A-VHV 170 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSS--E-EEE
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC--e-EEE
Confidence 4679999999999999999999998766 5788889999852 22222 1111122 2233333322 2 999
Q ss_pred cCCcc-cHHHHHhCCeeEEe
Q 002354 790 GDGIN-DAAALASSHIGVAM 808 (932)
Q Consensus 790 GDg~N-D~~al~~A~vgIa~ 808 (932)
||+.+ |+.+.+.|++....
T Consensus 171 gD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 171 GDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp ESSCCCCCCCSSSCSEEEEE
T ss_pred cCCchHhHHHHHHCCCeEEE
Confidence 99999 99999999998554
No 185
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=95.18 E-value=0.028 Score=58.44 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=72.1
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--ceec-c------cChhhHHHHHHHHhhCCCEEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G------VKPNEKKRFINELQNDENVVAM 788 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~v~~-~------~~p~~K~~~v~~l~~~g~~v~~ 788 (932)
.++.|++.+.++.|+++|+++.++|.... +..+-+.+|+... .+.+ . -.|+-=....+.+.-..+.++|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~ 171 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG 171 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence 45789999999999999999999997653 4567788998531 1111 1 1233334555666666778999
Q ss_pred EcCCcccHHHHHhCCee-EEecCchHHHHhhcCEEEe
Q 002354 789 VGDGINDAAALASSHIG-VAMGGGVGAASEVASVVLM 824 (932)
Q Consensus 789 vGDg~ND~~al~~A~vg-Ia~~~~~~~a~~~ad~vl~ 824 (932)
|||..+|+.+-++|++- |++..|. ..+|.++.
T Consensus 172 VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 172 IEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 99999999999999975 5665442 34677664
No 186
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=94.90 E-value=0.045 Score=57.72 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=73.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--Cceecc---cCh--hhHHHHHHHHhhCCCEEE
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVLSG---VKP--NEKKRFINELQNDENVVA 787 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~---gi~~--~~v~~~---~~p--~~K~~~v~~l~~~g~~v~ 787 (932)
-++.|++.++++.|+++|+++.++|..+...+..+-+.+ |+.. +.+++. -.| +-=..+.+.+.-....++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~~l 208 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL 208 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 367899999999999999999999999888888877744 4642 233322 122 222344555555567899
Q ss_pred EEcCCcccHHHHHhCCee-EEecC-c--h-HHHHhhcCEEEe
Q 002354 788 MVGDGINDAAALASSHIG-VAMGG-G--V-GAASEVASVVLM 824 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vg-Ia~~~-~--~-~~a~~~ad~vl~ 824 (932)
||||..+|+.+-+.|++- |.+.. + . +.....+|.++.
T Consensus 209 ~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 209 FLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred EEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 999999999999999986 44421 1 1 122345777764
No 187
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=94.35 E-value=0.01 Score=60.68 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=56.9
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHcCCCC---Cc-eecccChhhHHHHHHHHhhCCCEEEEEcC
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY----VASLVGIPK---DK-VLSGVKPNEKKRFINELQNDENVVAMVGD 791 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~----ia~~~gi~~---~~-v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 791 (932)
+.+++.+.++.|+++|+++.++|+.+...+.. +.+..+... +. .+....|.- ..+.+.+++.|. ++||||
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p-~~~~~~~~~~g~-~l~VGD 166 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQ-NTKSQWLQDKNI-RIFYGD 166 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTC-CCSHHHHHHTTE-EEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccchhhhcCCCCCH-HHHHHHHHHCCC-EEEEEC
Confidence 46799999999999999999999986543333 333344320 00 122223321 122333444454 999999
Q ss_pred CcccHHHHHhCCee-EEec
Q 002354 792 GINDAAALASSHIG-VAMG 809 (932)
Q Consensus 792 g~ND~~al~~A~vg-Ia~~ 809 (932)
..+|+.+-+.|++- |.+.
T Consensus 167 s~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 167 SDNDITAARDVGARGIRIL 185 (211)
T ss_dssp SHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHCCCeEEEEe
Confidence 99999999999986 4443
No 188
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=94.10 E-value=0.13 Score=59.25 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=62.0
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHcCCCCCceecc-------cChhhHHHHHHHHhhCCCE
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD------KKNSAEYVASLVGIPKDKVLSG-------VKPNEKKRFINELQNDENV 785 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd------~~~~a~~ia~~~gi~~~~v~~~-------~~p~~K~~~v~~l~~~g~~ 785 (932)
++.|++.++++.|+++|+++.++|+. ...........+.-..+.+++. -.|+-=..+.+.+.-....
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~ 179 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 179 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChhH
Confidence 57899999999999999999999985 3333332222222112233321 2233334555566556678
Q ss_pred EEEEcCCcccHHHHHhCCeeEEec
Q 002354 786 VAMVGDGINDAAALASSHIGVAMG 809 (932)
Q Consensus 786 v~~vGDg~ND~~al~~A~vgIa~~ 809 (932)
++||||..||+.+.+.|++....-
T Consensus 180 ~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 180 VVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEC
T ss_pred EEEECCcHHHHHHHHHcCCEEEEE
Confidence 999999999999999999986664
No 189
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=93.23 E-value=0.016 Score=64.37 Aligned_cols=15 Identities=7% Similarity=-0.234 Sum_probs=0.0
Q ss_pred ccccccccccccccc
Q 002354 63 HIRCRLECMSSCAAS 77 (932)
Q Consensus 63 ~~~~~~~~~~~~~~~ 77 (932)
+-++|--+-++.+.+
T Consensus 265 ~~~~~~~~~~~~s~~ 279 (358)
T 2pk2_A 265 KKTKADDRGTDEKTS 279 (358)
T ss_dssp ---------------
T ss_pred cCCcccCcccccccc
Confidence 344555565544333
No 190
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=93.01 E-value=0.0017 Score=65.27 Aligned_cols=80 Identities=13% Similarity=0.156 Sum_probs=59.8
Q ss_pred ccccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCccc-
Q 002354 718 DRIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND- 795 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND- 795 (932)
-++.|++.++++.|+++ |+++.++|+.+...+..+.+.+|+ .+.+++ + +..+.+.-....++||||+.+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~---~----~~~~~~~~~~~~~~~vgDs~~dD 143 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLG---P----QFVERIILTRDKTVVLGDLLIDD 143 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHC---H----HHHTTEEECSCGGGBCCSEEEES
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcC---H----HHHHHcCCCcccEEEECCchhhC
Confidence 35789999999999999 999999999988888888888887 333332 1 1333333345678999999999
Q ss_pred ---HHHHH-hCCee
Q 002354 796 ---AAALA-SSHIG 805 (932)
Q Consensus 796 ---~~al~-~A~vg 805 (932)
+.+-+ .|++-
T Consensus 144 ~~~i~~A~~~aG~~ 157 (193)
T 2i7d_A 144 KDTVRGQEETPSWE 157 (193)
T ss_dssp SSCCCSSCSSCSSE
T ss_pred cHHHhhcccccccc
Confidence 66555 66654
No 191
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=92.84 E-value=0.19 Score=53.97 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=67.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHH--------------HHHHHHHcCCCCCceec-ccChhhHHHHHHHHhhCC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNS--------------AEYVASLVGIPKDKVLS-GVKPNEKKRFINELQNDE 783 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~--------------a~~ia~~~gi~~~~v~~-~~~p~~K~~~v~~l~~~g 783 (932)
...+++.++++.|++.|+ +.++|...... ...+....+.+ .+.. .-.|+-=..+.+.+.-..
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--ALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--CEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--ceeeCCCCHHHHHHHHHHcCCCh
Confidence 457899999999999999 77887654321 12222223332 2211 112222222333333334
Q ss_pred CEEEEEcCCc-ccHHHHHhCCeeEEe---cC-chHHHH---------hhcCEEEeCCChhHHHHHHH
Q 002354 784 NVVAMVGDGI-NDAAALASSHIGVAM---GG-GVGAAS---------EVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 784 ~~v~~vGDg~-ND~~al~~A~vgIa~---~~-~~~~a~---------~~ad~vl~~~~~~~i~~~i~ 836 (932)
..++||||+. ||+.|.+.|++...+ |. ..+... ..+|+++. ++..+..+++
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l~ 297 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGLE 297 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC-
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHHH
Confidence 6799999996 999999999998776 32 222222 35898884 6776665544
No 192
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=92.74 E-value=0.03 Score=58.19 Aligned_cols=108 Identities=11% Similarity=0.085 Sum_probs=65.4
Q ss_pred ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-------------HHcCCCCCceecccChhhHHHHHHHHhh----C
Q 002354 720 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA-------------SLVGIPKDKVLSGVKPNEKKRFINELQN----D 782 (932)
Q Consensus 720 lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-------------~~~gi~~~~v~~~~~p~~K~~~v~~l~~----~ 782 (932)
..+++.+.++.|+ .|+++ ++|+.......... ...+.. .+.. -.| |...++.+.+ .
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~Kp--~~~~~~~~~~~lgi~ 195 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTK--AMVV-GKP--EKTFFLEALRDADCA 195 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCC--CEEC-STT--SHHHHHHHGGGGTCC
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCC--ceEe-cCC--CHHHHHHHHHHcCCC
Confidence 6789999999999 89998 88876543221111 112221 2211 122 3334443332 3
Q ss_pred CCEEEEEcCCc-ccHHHHHhCCeeEE-ecCc---hHHH---HhhcCEEEeCCChhHHHHHHH
Q 002354 783 ENVVAMVGDGI-NDAAALASSHIGVA-MGGG---VGAA---SEVASVVLMGNRLSQLLVALE 836 (932)
Q Consensus 783 g~~v~~vGDg~-ND~~al~~A~vgIa-~~~~---~~~a---~~~ad~vl~~~~~~~i~~~i~ 836 (932)
...++||||+. ||+.|.+.|++-.. +..| .+.. ...+|+++ +++..+..++.
T Consensus 196 ~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l~ 255 (259)
T 2ho4_A 196 PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHIL 255 (259)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHHH
T ss_pred hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHHH
Confidence 45799999998 99999999998643 3333 1111 23578887 47777766543
No 193
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=92.55 E-value=0.1 Score=59.14 Aligned_cols=108 Identities=15% Similarity=0.212 Sum_probs=70.9
Q ss_pred CeEEEEEECCEEEEEE----Ee---cc--cccHHHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcC
Q 002354 699 QSLVYVGVDNMLAGLI----YV---ED--RIRDDAAHVVNSLSSQGIGVYMLSGDK------------KNSAEYVASLVG 757 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i----~l---~D--~lr~~~~~~i~~L~~~Gi~v~~~TGd~------------~~~a~~ia~~~g 757 (932)
...+++..||+++--- .. .| .+-|++.++|+.|+++|++++++|+.+ ...+..+.+.+|
T Consensus 58 ~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lg 137 (416)
T 3zvl_A 58 GKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLG 137 (416)
T ss_dssp SSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcC
Confidence 4566777777765321 00 00 257999999999999999999999855 223778889999
Q ss_pred CCCCceeccc-----Chh--hHHHHHHHHh----hCCCEEEEEcCCc-----------------ccHHHHHhCCeeE
Q 002354 758 IPKDKVLSGV-----KPN--EKKRFINELQ----NDENVVAMVGDGI-----------------NDAAALASSHIGV 806 (932)
Q Consensus 758 i~~~~v~~~~-----~p~--~K~~~v~~l~----~~g~~v~~vGDg~-----------------ND~~al~~A~vgI 806 (932)
+..+.+++.- .|. -=..+.+.+. -....++||||.. +|..+-+.|++-.
T Consensus 138 l~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 138 VPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp SCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 8654444421 221 1122333332 2235799999997 6888888887764
No 194
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=91.36 E-value=0.29 Score=51.35 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=61.5
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc--C-------------CCCCceec----ccCh--hhHHHHH
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV--G-------------IPKDKVLS----GVKP--NEKKRFI 776 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~--g-------------i~~~~v~~----~~~p--~~K~~~v 776 (932)
-++.|++.++++. |+++.++|..+...+..+-+.+ | ++ .+|. +..| +-=..+.
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~--~~f~~~~~g~KP~p~~~~~a~ 197 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTSGKKTETQSYANIL 197 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHHCCTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc--eEEeeeccCCCCCHHHHHHHH
Confidence 3567899998888 9999999999999888888877 5 33 3332 2233 2223445
Q ss_pred HHHhhCCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 777 NELQNDENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 777 ~~l~~~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+.+.-....++||||..+|+.+-++|++-.
T Consensus 198 ~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 198 RDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 555555678999999999999999999864
No 195
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=90.38 E-value=0.49 Score=49.23 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=63.9
Q ss_pred cccccHHHHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCC
Q 002354 717 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN-------------SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDE 783 (932)
Q Consensus 717 ~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~-------------~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g 783 (932)
...+.+++.++++.|+ .|+++ ++|..+.. -...+...++... .....-.|+-=..+.+.+.-..
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~-~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKP-VYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCC-EECSTTSHHHHHHHHHHHCSCG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCc-cccCCCCHHHHHHHHHHcCCCH
Confidence 4567899999999997 89987 77765441 1122222333221 1112222333334445554455
Q ss_pred CEEEEEcCC-cccHHHHHhCCee-EEe--cCchH-HHHh---hcCEEEe
Q 002354 784 NVVAMVGDG-INDAAALASSHIG-VAM--GGGVG-AASE---VASVVLM 824 (932)
Q Consensus 784 ~~v~~vGDg-~ND~~al~~A~vg-Ia~--~~~~~-~a~~---~ad~vl~ 824 (932)
..++||||+ .||+.+.+.|++. |.+ |.+.. ..++ .+|+++.
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 789999999 6999999999987 333 43322 2232 5898884
No 196
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=88.30 E-value=0.51 Score=44.80 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=47.0
Q ss_pred eEEEEEECCEEEEEEEecc-----cccHHHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCCCceecccChh
Q 002354 700 SLVYVGVDNMLAGLIYVED-----RIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPKDKVLSGVKPN 770 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D-----~lr~~~~~~i~~L~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~~~v~~~~~p~ 770 (932)
..+++..||+++- .+ +..+++.++|++|+++|++++++||++ ...+....++.|++...+ +.-.|+
T Consensus 4 k~i~~DlDGTL~~----~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I-~~n~P~ 77 (142)
T 2obb_A 4 MTIAVDFDGTIVE----HRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAA-NKDYPE 77 (142)
T ss_dssp CEEEECCBTTTBC----SCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE-SSSSTT
T ss_pred eEEEEECcCCCCC----CCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE-EcCCch
Confidence 3556666666543 22 245799999999999999999999998 566777788888864333 333354
No 197
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=87.22 E-value=0.008 Score=60.48 Aligned_cols=83 Identities=12% Similarity=0.096 Sum_probs=57.8
Q ss_pred cccHHHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCccc--
Q 002354 719 RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIND-- 795 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND-- 795 (932)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+.. ..|. ....+.+.-....++||||..+|
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~-~~f~-------~~~~~~l~~~~~~~~~vgDs~~dD~ 146 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE-KYFG-------PDFLEQIVLTRDKTVVSADLLIDDR 146 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH-HHHC-------GGGGGGEEECSCSTTSCCSEEEESC
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH-Hhch-------HHHHHHhccCCccEEEECcccccCC
Confidence 5789999999999999 99999999988877777777777641 0221 11222222235668899999999
Q ss_pred --HHHHH-hCCee-EEec
Q 002354 796 --AAALA-SSHIG-VAMG 809 (932)
Q Consensus 796 --~~al~-~A~vg-Ia~~ 809 (932)
..+-+ .|++- |.+.
T Consensus 147 ~~~~~a~~~aG~~~i~~~ 164 (197)
T 1q92_A 147 PDITGAEPTPSWEHVLFT 164 (197)
T ss_dssp SCCCCSCSSCSSEEEEEC
T ss_pred chhhhcccCCCceEEEec
Confidence 76655 66654 3443
No 198
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=86.63 E-value=0.58 Score=48.87 Aligned_cols=96 Identities=14% Similarity=0.216 Sum_probs=63.5
Q ss_pred EEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCCC--CceecccChhhHHHH
Q 002354 701 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL---VGIPK--DKVLSGVKPNEKKRF 775 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~---~gi~~--~~v~~~~~p~~K~~~ 775 (932)
.+++..|++++- .+..-+++.+++++|++.|++++++||+...+...+.++ +|++. +.+++.. . ..
T Consensus 3 ~i~~D~DGtL~~----~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~--~---~~ 73 (263)
T 1zjj_A 3 AIIFDMDGVLYR----GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG--L---AT 73 (263)
T ss_dssp EEEEECBTTTEE----TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH--H---HH
T ss_pred EEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH--H---HH
Confidence 456667777653 344457899999999999999999999988777776665 57752 1333211 1 22
Q ss_pred HHHHhh--CCCEEEEEcCCcccHHHHHhCCeeE
Q 002354 776 INELQN--DENVVAMVGDGINDAAALASSHIGV 806 (932)
Q Consensus 776 v~~l~~--~g~~v~~vGDg~ND~~al~~A~vgI 806 (932)
+..+++ .+..+..+|+. .+...++..++.+
T Consensus 74 ~~~l~~~~~~~~v~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 74 RLYMSKHLDPGKIFVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp HHHHHHHSCCCCEEEESCH-HHHHHHHHHTSCB
T ss_pred HHHHHHhCCCCEEEEEcCH-HHHHHHHHcCCee
Confidence 223332 34678899985 6667777666543
No 199
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=85.76 E-value=1.8 Score=42.11 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=61.6
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCC---CHH---HHHHHHHHcCCCC--CceecccChhhHHHHHHHHhhCCCEEEEEc
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGD---KKN---SAEYVASLVGIPK--DKVLSGVKPNEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd---~~~---~a~~ia~~~gi~~--~~v~~~~~p~~K~~~v~~l~~~g~~v~~vG 790 (932)
++.|++.++++.|++. +++.++|+. +.. +...+.+.++... +.+++.-. .| + ..++|||
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~--~~------l----~~~l~ie 135 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK--NI------I----LADYLID 135 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG--GG------B----CCSEEEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc--Ce------e----cccEEec
Confidence 5789999999999985 999999987 321 1223444455421 23443321 11 1 3479999
Q ss_pred CCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCChhHHHHHH
Q 002354 791 DGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 835 (932)
Q Consensus 791 Dg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~~~~i~~~i 835 (932)
|..+|+. +.|+-.|++..+... ...++.++ +++..+..++
T Consensus 136 Ds~~~i~--~aaG~~i~~~~~~~~-~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 136 DNPKQLE--IFEGKSIMFTASHNV-YEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp SCHHHHH--HCSSEEEEECCGGGT-TCCSSEEE--CSHHHHHHHH
T ss_pred CCcchHH--HhCCCeEEeCCCccc-CCCCceec--CCHHHHHHHH
Confidence 9999985 567766666533221 13466666 4677776655
No 200
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=85.01 E-value=4.8 Score=41.68 Aligned_cols=110 Identities=11% Similarity=0.066 Sum_probs=65.9
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHH-------------HHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCC
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKN-------------SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN 784 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~-------------~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~ 784 (932)
....+++.++++.|+ +|+++ ++|..... -...+...++-.. .....-.|+-=....+. -...
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEP-IIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC-EECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCc-cEecCCCHHHHHHHHHh--CCcc
Confidence 456789999999999 89988 77754331 1223333444331 11222222222222333 4567
Q ss_pred EEEEEcCCc-ccHHHHHhCCee-EEecCc--h-HHHHh---hcCEEEeCCChhHHHHH
Q 002354 785 VVAMVGDGI-NDAAALASSHIG-VAMGGG--V-GAASE---VASVVLMGNRLSQLLVA 834 (932)
Q Consensus 785 ~v~~vGDg~-ND~~al~~A~vg-Ia~~~~--~-~~a~~---~ad~vl~~~~~~~i~~~ 834 (932)
.++||||.. +|+.+-+.|++. |.+..| . +...+ .+|+++. ++..+.+.
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~--~l~el~~~ 259 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLP--SVYELIDY 259 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEES--SGGGGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEEC--CHHHHHHH
Confidence 899999995 999999999986 555432 2 22222 5788884 56665543
No 201
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=83.46 E-value=1.2 Score=48.92 Aligned_cols=99 Identities=12% Similarity=0.191 Sum_probs=69.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCC--CCceecccChhhH
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK----KNSAEYVASLVGIP--KDKVLSGVKPNEK 772 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~--~~~v~~~~~p~~K 772 (932)
...+.+..||++. -.+.+-|++.++++.|++.|++++++|+.. ...+..+.+.+|++ .++++....+-..
T Consensus 13 ~~~~l~D~DGvl~----~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~ 88 (352)
T 3kc2_A 13 KIAFAFDIDGVLF----RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS 88 (352)
T ss_dssp CEEEEECCBTTTE----ETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG
T ss_pred CCEEEEECCCeeE----cCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH
Confidence 3455666666543 356777999999999999999999999875 44566666678985 3466655444322
Q ss_pred HHHHHHHhhCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002354 773 KRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 808 (932)
Q Consensus 773 ~~~v~~l~~~g~~v~~vGDg~ND~~al~~A~vgIa~ 808 (932)
+ + +.+..|..+|-. .....++.+++-...
T Consensus 89 --~---~-~~~~~v~viG~~-~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 89 --L---V-NKYSRILAVGTP-SVRGVAEGYGFQDVV 117 (352)
T ss_dssp --G---T-TTCSEEEEESST-THHHHHHHHTCSEEE
T ss_pred --H---H-hcCCEEEEECCH-HHHHHHHhCCCeEec
Confidence 1 1 246789999975 667788888887664
No 202
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=83.31 E-value=0.22 Score=50.10 Aligned_cols=87 Identities=10% Similarity=0.075 Sum_probs=64.4
Q ss_pred ccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccCh----hhHHHHHHHHhhC---CCEEEEEc
Q 002354 718 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP----NEKKRFINELQND---ENVVAMVG 790 (932)
Q Consensus 718 D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p----~~K~~~v~~l~~~---g~~v~~vG 790 (932)
=.+||++.+.++.|++. +++++.|.-....|..+.+.+++.. .+-.++.. ..|...++.++.- ...+++|+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~-~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS-CEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc-cEEEEEEcccceecCCceeeeHhHhCCChhHEEEEE
Confidence 35799999999999998 9999999999999999999999864 22222222 2243334444443 35799999
Q ss_pred CCcccHHHHHhCCeeE
Q 002354 791 DGINDAAALASSHIGV 806 (932)
Q Consensus 791 Dg~ND~~al~~A~vgI 806 (932)
|..++..+-..+++-|
T Consensus 145 Ds~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 145 NSPASYIFHPENAVPV 160 (195)
T ss_dssp SCGGGGTTCGGGEEEC
T ss_pred CCHHHhhhCccCccEE
Confidence 9999998766665554
No 203
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=81.62 E-value=0.28 Score=48.69 Aligned_cols=86 Identities=9% Similarity=0.102 Sum_probs=63.8
Q ss_pred cccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChh----hHHHHHHHHhhC---CCEEEEEcC
Q 002354 719 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPN----EKKRFINELQND---ENVVAMVGD 791 (932)
Q Consensus 719 ~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~----~K~~~v~~l~~~---g~~v~~vGD 791 (932)
.+||++.+.++.|++. +++++.|.-....|..+.+.++... .+..++..+ .|...++.++.- ...+++|||
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 5799999999999998 9999999999999999999999863 222222221 233333444433 357999999
Q ss_pred CcccHHHHHhCCeeE
Q 002354 792 GINDAAALASSHIGV 806 (932)
Q Consensus 792 g~ND~~al~~A~vgI 806 (932)
..+|..+-..+++-|
T Consensus 133 s~~~~~~~~~ngi~i 147 (181)
T 2ght_A 133 SPASYVFHPDNAVPV 147 (181)
T ss_dssp CGGGGTTCTTSBCCC
T ss_pred CHHHhccCcCCEeEe
Confidence 999998766666655
No 204
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=79.64 E-value=7.7 Score=39.63 Aligned_cols=109 Identities=11% Similarity=0.085 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHH
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 799 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al 799 (932)
--|..++++++++.+-++.+++ ++....+..+++.+|++- ..+.-.++++-...++.++++|..| .|||+.-
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i-~~~~~~~~ee~~~~i~~l~~~G~~v-VVG~~~~----- 164 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL-DQRSYITEEDARGQINELKANGTEA-VVGAGLI----- 164 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE-EEEEESSHHHHHHHHHHHHHTTCCE-EEESHHH-----
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCce-EEEEeCCHHHHHHHHHHHHHCCCCE-EECCHHH-----
Confidence 3477888888888877877766 455667788999999863 4566678889999999999999765 7777532
Q ss_pred HhCCeeEEecCchHHHHhh-cCEEEeCCChhHHHHHHHHHHHHHHHHHHHH
Q 002354 800 ASSHIGVAMGGGVGAASEV-ASVVLMGNRLSQLLVALELSRLTMKTVKQNL 849 (932)
Q Consensus 800 ~~A~vgIa~~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~gR~~~~~i~~nl 849 (932)
.+.|++. -..++.. +-+.|..+++.++++.+..+++-
T Consensus 165 ------------~~~A~~~Gl~~vlI~-s~eSI~~Ai~eA~~l~~~~r~~~ 202 (225)
T 2pju_A 165 ------------TDLAEEAGMTGIFIY-SAATVRQAFSDALDMTRMSLRHN 202 (225)
T ss_dssp ------------HHHHHHTTSEEEESS-CHHHHHHHHHHHHHHHHHC----
T ss_pred ------------HHHHHHcCCcEEEEC-CHHHHHHHHHHHHHHHHHHHHhc
Confidence 2333332 3445555 47999999999999998877754
No 205
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=79.40 E-value=5.8 Score=39.57 Aligned_cols=108 Identities=12% Similarity=0.096 Sum_probs=79.4
Q ss_pred cHHHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCCcccHHHH
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 799 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al 799 (932)
--|..++++++++.+-++.+++ ++....+..+++-+|++- ..+.--++++=...++.++++|..+ .|||+.-
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i-~~~~~~~~~e~~~~i~~l~~~G~~v-vVG~~~~----- 152 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKI-KEFLFSSEDEITTLISKVKTENIKI-VVSGKTV----- 152 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEE-EEEEECSGGGHHHHHHHHHHTTCCE-EEECHHH-----
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCce-EEEEeCCHHHHHHHHHHHHHCCCeE-EECCHHH-----
Confidence 3578888999998888877766 455556788999999863 4455577888889999999999765 7777532
Q ss_pred HhCCeeEEecCchHHHHh-hcCEEEeCCChhHHHHHHHHHHHHHHHHHH
Q 002354 800 ASSHIGVAMGGGVGAASE-VASVVLMGNRLSQLLVALELSRLTMKTVKQ 847 (932)
Q Consensus 800 ~~A~vgIa~~~~~~~a~~-~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 847 (932)
.+.|++ --..++...+.+.|..+++.++++.+..++
T Consensus 153 ------------~~~A~~~Gl~~vli~sg~eSI~~Ai~eA~~l~~~~~~ 189 (196)
T 2q5c_A 153 ------------TDEAIKQGLYGETINSGEESLRRAIEEALNLIEVRNE 189 (196)
T ss_dssp ------------HHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ------------HHHHHHcCCcEEEEecCHHHHHHHHHHHHHHHHHHHh
Confidence 223332 245567777899999999999998877654
No 206
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=78.17 E-value=1.6 Score=45.23 Aligned_cols=86 Identities=13% Similarity=0.241 Sum_probs=59.2
Q ss_pred EEEEEECCEEEEEEEeccc-ccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCC-------------Cc
Q 002354 701 LVYVGVDNMLAGLIYVEDR-IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IPK-------------DK 762 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l~D~-lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~-------------~~ 762 (932)
.+++..||+++- -+.. +.+.+++++++|+++|++++++||++ ..+..+.+++| ++. ..
T Consensus 4 li~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 79 (261)
T 2rbk_A 4 ALFFDIDGTLVS---FETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEV 79 (261)
T ss_dssp EEEECSBTTTBC---TTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCcC---CCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEE
Confidence 455566776652 1233 78999999999999999999999999 88888878887 531 01
Q ss_pred eecc-cChhhHHHHHHHHhhCCCEEEEEc
Q 002354 763 VLSG-VKPNEKKRFINELQNDENVVAMVG 790 (932)
Q Consensus 763 v~~~-~~p~~K~~~v~~l~~~g~~v~~vG 790 (932)
++.. +.++.-.++++.+++.+..+...+
T Consensus 80 i~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 108 (261)
T 2rbk_A 80 IYKSAIPQEEVKAMAAFCEKKGVPCIFVE 108 (261)
T ss_dssp EEECCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EEecCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 2222 345555677788877665555443
No 207
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=74.95 E-value=4.5 Score=42.36 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=67.0
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC-CC--ceecccChhh
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGIP-KD--KVLSGVKPNE 771 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~-~~--~v~~~~~p~~ 771 (932)
....+.+..||+++- .+.+-+++.++|++|+++|++++++|+ +.........+++|++ .. .++. +.+
T Consensus 13 ~~k~i~~D~DGtL~~----~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~---~~~ 85 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT----YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS---SGM 85 (284)
T ss_dssp GCSEEEECSBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE---HHH
T ss_pred cCCEEEEcCcCCcCc----CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc---HHH
Confidence 356777888887753 456678999999999999999999995 7778888888999986 32 2322 111
Q ss_pred HHHHHHHHh-hCCCEEE-EEcCCcccHHHHHhCCeeEE
Q 002354 772 KKRFINELQ-NDENVVA-MVGDGINDAAALASSHIGVA 807 (932)
Q Consensus 772 K~~~v~~l~-~~g~~v~-~vGDg~ND~~al~~A~vgIa 807 (932)
...+.++ +....+. .+|+. .+...++..++-+.
T Consensus 86 --~~~~~l~~~~~~~v~~~lg~~-~l~~~l~~~G~~~~ 120 (284)
T 2hx1_A 86 --ITKEYIDLKVDGGIVAYLGTA-NSANYLVSDGIKML 120 (284)
T ss_dssp --HHHHHHHHHCCSEEEEEESCH-HHHHTTCBTTEEEE
T ss_pred --HHHHHHHhhcCCcEEEEecCH-HHHHHHHHCCCeec
Confidence 1112222 2222788 89985 56666666655443
No 208
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=71.29 E-value=5.3 Score=46.08 Aligned_cols=83 Identities=12% Similarity=0.260 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCC---------C------Cc-eecccChh--------------
Q 002354 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV-GIP---------K------DK-VLSGVKPN-------------- 770 (932)
Q Consensus 722 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~-gi~---------~------~~-v~~~~~p~-------------- 770 (932)
|+.++.+++||++| ++.++|..+..-+..+++.+ |++ . +. |.....|.
T Consensus 249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd~~ 327 (555)
T 2jc9_A 249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTK 327 (555)
T ss_dssp THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEETT
T ss_pred hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEeecC
Confidence 57788999999999 99999999999999999998 852 0 11 11111221
Q ss_pred -------------hH---------HHHHHHHhhCCCEEEEEcCC-cccHHHHH-hCCee
Q 002354 771 -------------EK---------KRFINELQNDENVVAMVGDG-INDAAALA-SSHIG 805 (932)
Q Consensus 771 -------------~K---------~~~v~~l~~~g~~v~~vGDg-~ND~~al~-~A~vg 805 (932)
+| ..+.+.+...|..|++|||. ..|+-.-+ .++.=
T Consensus 328 tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWr 386 (555)
T 2jc9_A 328 TGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWR 386 (555)
T ss_dssp TTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCE
T ss_pred CCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeE
Confidence 11 45566677789999999998 68886664 55554
No 209
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=70.97 E-value=2.3 Score=43.67 Aligned_cols=54 Identities=19% Similarity=0.334 Sum_probs=43.2
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 758 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi 758 (932)
....+++..||+++. -...+.+.++++|++|+++ ++++++||++... +.+.+++
T Consensus 5 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~---~~~~l~~ 58 (246)
T 2amy_A 5 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQK-IKIGVVGGSDFEK---VQEQLGN 58 (246)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTTT-SEEEEECSSCHHH---HHHHHCT
T ss_pred CceEEEEECCCCcCC---CCcccCHHHHHHHHHHHhC-CeEEEEcCCCHHH---HHHHhcc
Confidence 456788888998874 2446889999999999999 9999999998764 5566664
No 210
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=69.85 E-value=8.8 Score=35.05 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=46.2
Q ss_pred EEEEEECCEEEEEEE--e-cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHH
Q 002354 701 LVYVGVDNMLAGLIY--V-EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFIN 777 (932)
Q Consensus 701 ~~~va~~~~~lG~i~--l-~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~ 777 (932)
.+++..||+++.--. + +..+.+++.+++++|+++|++++++||+..... . -.+..+.++.-.++++
T Consensus 3 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~---------n--G~~~~~~~~~~~~i~~ 71 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRTY---------E--GNVGKINIHTLPIITE 71 (126)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTT---------T--TCHHHHHHHTHHHHHH
T ss_pred EEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhc---------c--ccccccCHHHHHHHHH
Confidence 345555666553100 0 014678999999999999999999999986541 1 0112234445567777
Q ss_pred HHhhCCC
Q 002354 778 ELQNDEN 784 (932)
Q Consensus 778 ~l~~~g~ 784 (932)
.+++.+.
T Consensus 72 ~~~~~~~ 78 (126)
T 1xpj_A 72 WLDKHQV 78 (126)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 7777654
No 211
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=69.42 E-value=5.8 Score=38.41 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCCc---------------EEEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTTE---------------TAIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~---------------~~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.+=++.+ .+.|.|||..++.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy 63 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISY 63 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCH
Confidence 489999999999999999999988654 6889999999886
No 212
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=68.42 E-value=2.7 Score=43.71 Aligned_cols=52 Identities=17% Similarity=0.263 Sum_probs=41.9
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 753 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia 753 (932)
...++++..||+++. -...+.+.+.++|++|+++ ++++++||++........
T Consensus 12 ~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l 63 (262)
T 2fue_A 12 ERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQL 63 (262)
T ss_dssp -CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHH
T ss_pred CeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHHH
Confidence 457888888998874 2446889999999999999 999999999987665443
No 213
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=64.57 E-value=6.9 Score=38.90 Aligned_cols=40 Identities=18% Similarity=0.069 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCCcE-------------------EEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.|=++.+. +.|.|||..++.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy 108 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISF 108 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCH
Confidence 4899999999999999999998876654 889999999886
No 214
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=64.05 E-value=5.9 Score=42.07 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=48.2
Q ss_pred CCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 698 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 698 g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
....+++..||+++- .+++-+++.+++++|+++|++++++| |+.........+.+|++
T Consensus 20 ~~k~i~~D~DGTL~~----~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWN----GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp HCSEEEECSBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred hCCEEEECCCCcEec----CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 356778888888763 56778899999999999999999999 57888877788888885
No 215
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=62.95 E-value=7.4 Score=39.04 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCC-------------------cEEEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTT-------------------ETAIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~-------------------~~~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.+=++. +.+.|.||+..++.
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy 107 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISY 107 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCH
Confidence 48899999999999999999998873 44889999999886
No 216
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=62.81 E-value=3.5 Score=42.27 Aligned_cols=55 Identities=16% Similarity=0.294 Sum_probs=42.6
Q ss_pred EEEEEECCEEEEEEEe--cccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 002354 701 LVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV 756 (932)
Q Consensus 701 ~~~va~~~~~lG~i~l--~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~ 756 (932)
.+++..|++++..-.- ...+.+.+.++|++|+++| +++++||++...+..+.+++
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence 4566677776531100 1157899999999999999 99999999999999888766
No 217
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=62.60 E-value=7.7 Score=39.92 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCCcE-------------------EEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~~~~~~~~ 177 (932)
++|=|-+|+.+.+++||.++.|=++.+. +.|.||+..++.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy 159 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSF 159 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCH
Confidence 4899999999999999999999876653 889999999886
No 218
>2l6f_A Focal adhesion kinase 1, linker1, paxillin, linke paxillin; FAT, FAK, LD2, LD4, fusion protein, chimera protei transferase,cell adhesion; NMR {Gallus gallus} PDB: 2l6g_A 2l6h_A
Probab=66.40 E-value=1.6 Score=43.16 Aligned_cols=23 Identities=57% Similarity=1.125 Sum_probs=10.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC
Q 002354 82 GGSAGGDVGGGGGGGGGGNGGSD 104 (932)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~ 104 (932)
+|+++|.||.||+||.|+.||.|
T Consensus 176 sg~~~~~~~~~~~~~~~~~~~~~ 198 (215)
T 2l6f_A 176 SGSGSGSGGSGGSGGSGGSGGSG 198 (215)
Confidence 33334444444555444444333
No 219
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=61.03 E-value=9.4 Score=38.02 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCC---------------cEEEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTT---------------ETAIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~---------------~~~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.|=++. +.+.|.|||..++.
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy 86 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDY 86 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCH
Confidence 48999999999999999999987755 45789999999886
No 220
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=61.02 E-value=3.1 Score=43.67 Aligned_cols=85 Identities=18% Similarity=0.123 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHHhCCCeEEEEcCCCHHHH----------HHH----HHHcCCCCCceecccChhhHHHHHHHH----hhC
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLSGDKKNSA----------EYV----ASLVGIPKDKVLSGVKPNEKKRFINEL----QND 782 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~TGd~~~~a----------~~i----a~~~gi~~~~v~~~~~p~~K~~~v~~l----~~~ 782 (932)
.+...+.++.|++.|++ .++|..+.... ..+ -..++-. +.....-.|+-=....+.+ .-.
T Consensus 147 ~~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~-~~~~~KP~p~~~~~a~~~l~~~~~~~ 224 (284)
T 2hx1_A 147 FHDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRR-FIRFGKPDSQMFMFAYDMLRQKMEIS 224 (284)
T ss_dssp HHHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSC-EEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred cccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCc-eeEecCCCHHHHHHHHHHHhhccCCC
Confidence 35777778899999999 88886432211 111 1122211 1122223343334455666 444
Q ss_pred CCEEEEEcCCc-ccHHHHHhCCeeEE
Q 002354 783 ENVVAMVGDGI-NDAAALASSHIGVA 807 (932)
Q Consensus 783 g~~v~~vGDg~-ND~~al~~A~vgIa 807 (932)
...++||||.. +|+.+-+.|++...
T Consensus 225 ~~~~~~VGD~~~~Di~~A~~aG~~~i 250 (284)
T 2hx1_A 225 KREILMVGDTLHTDILGGNKFGLDTA 250 (284)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEE
T ss_pred cceEEEECCCcHHHHHHHHHcCCeEE
Confidence 56899999995 99999999998643
No 221
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=59.24 E-value=8.7 Score=38.04 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCCcE-------------------EEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.+=++.+. +.|.|||..++.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy 67 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSL 67 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCH
Confidence 4899999999999999999998776543 788999998886
No 222
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=57.39 E-value=8.6 Score=41.42 Aligned_cols=49 Identities=8% Similarity=0.102 Sum_probs=42.1
Q ss_pred EEEEecccccHHHHHHHHHHH-hC----------CCeEEEEcCCCHHHHHHHHHHcCCCC
Q 002354 712 GLIYVEDRIRDDAAHVVNSLS-SQ----------GIGVYMLSGDKKNSAEYVASLVGIPK 760 (932)
Q Consensus 712 G~i~l~D~lr~~~~~~i~~L~-~~----------Gi~v~~~TGd~~~~a~~ia~~~gi~~ 760 (932)
|++.+..++.++..++++++. +. |+.++++|||+......+++++|++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 36 SWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp CEEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred eEEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 345677888999999999988 33 79999999999999999999999963
No 223
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=50.39 E-value=1.4e+02 Score=28.70 Aligned_cols=47 Identities=19% Similarity=0.134 Sum_probs=38.5
Q ss_pred cEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecC-----CcEEEEEeCC
Q 002354 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLT-----TETAIVWPVS 172 (932)
Q Consensus 126 ~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~-----~~~~~V~~~~ 172 (932)
...++.|.|+.-..-...|++.+++...|.++.+... .+.+.|+|..
T Consensus 87 ~~~~l~V~nLp~~~te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~ 138 (177)
T 2f3j_A 87 TGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFER 138 (177)
T ss_dssp TCEEEEEECCCSCCCHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCC
Confidence 3568899999877778889999999999999888653 4678899875
No 224
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=48.62 E-value=17 Score=38.61 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHhcCCCeeEEEeecCCc-----------------EEEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQPQVSSASVNLTTE-----------------TAIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~-----------------~~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.+++||.++.+=++.+ .+.|.|||..++.
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy 65 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSL 65 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCH
Confidence 489999999999999999999888655 3789999999886
No 225
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=46.49 E-value=18 Score=36.65 Aligned_cols=57 Identities=16% Similarity=0.138 Sum_probs=43.3
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
...+.+..||+++- .++.-+++.++++.|++.|++++++| |..........+++|++
T Consensus 7 ik~i~fDlDGTLld----~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 7 LKAVLVDLNGTLHI----EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp CCEEEEESSSSSCC-------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCcEEe----CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45778888888764 34455788999999999999999999 66666666666778885
No 226
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=43.69 E-value=56 Score=27.28 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=42.5
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
..+++..|+.|+.-.-.+.++|++++-= +.+.|..|..... +.+.+..++.||+....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~G---------~~l~V~~dd~~a~---------~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQPG---------ETLLIIADDPATT---------RDIPGFCTFMEHELVAK 67 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCTT---------CEEEEEECCTTHH---------HHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHH---------HHHHHHHHHCCCEEEEE
Confidence 3679999999999999999999997421 2344554443321 57888899999987544
No 227
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=43.50 E-value=62 Score=37.11 Aligned_cols=72 Identities=8% Similarity=0.211 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhH-----HHHHHHHh--hCCCEEEEE-cCCcc
Q 002354 723 DAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEK-----KRFINELQ--NDENVVAMV-GDGIN 794 (932)
Q Consensus 723 ~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K-----~~~v~~l~--~~g~~v~~v-GDg~N 794 (932)
...+.=+.|++.|++.++..||.... ..++++.|+. .|++...|... .++.+.|+ +.|-.+-.+ ++.+-
T Consensus 96 sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~--~V~~d~ep~~~~r~rD~~V~~~l~~~~~gi~~~~~~~~~l~ 172 (506)
T 3umv_A 96 GLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAS--TLVADFSPLRPVREALDAVVGDLRREAPGVAVHQVDAHNVV 172 (506)
T ss_dssp HHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCS--EEEECCCCCHHHHHHHHHHHHHHHHHCTTSEEEEECCSCSS
T ss_pred HHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCC--EEEeccChhHHHHHHHHHHHHHHhhccCCeEEEEeCCcEEE
Confidence 34445567788999999999999999 9999999998 78888887653 34444555 456555544 44555
Q ss_pred cHH
Q 002354 795 DAA 797 (932)
Q Consensus 795 D~~ 797 (932)
+..
T Consensus 173 ~p~ 175 (506)
T 3umv_A 173 PVW 175 (506)
T ss_dssp CHH
T ss_pred Ccc
Confidence 554
No 228
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=40.86 E-value=31 Score=29.37 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=41.5
Q ss_pred EEEecCCCChhhHHHHHHHHhcC--CCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccccc
Q 002354 129 ILDVGGMTCGGCAASVKRILESQ--PQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~--~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (932)
+++..|+.|+.-.-...++|+++ +| +.+.|..|..... +.+.+..++.||+....+
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~---------~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISR---------QNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHH---------HHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHH---------HHHHHHHHHCCCEEEEEE
Confidence 58899999999999999999998 35 2344554433221 678888999999876443
No 229
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=39.27 E-value=22 Score=36.24 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=44.5
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~ 759 (932)
...+.+..||+++- .+..-+++.++++.|++.|+++.++||+.......+.+. +|++
T Consensus 5 ~k~v~fDlDGTL~~----~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 5 YQGYLIDLDGTIYL----GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp CCEEEECCBTTTEE----TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCeEEe----CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 35667777777653 344457999999999999999999999988777766665 8885
No 230
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=39.26 E-value=91 Score=27.05 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=41.5
Q ss_pred EEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 127 ~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
..+++..|+.|+.-.-++.++|++++.= +.+.|..|..... +.+.+..++.||+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~---------~dIp~~~~~~G~~v~~ 83 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSI---------NNIPLDARNHGYTVLD 83 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSS---------CHHHHHHHHHTCSEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchH---------HHHHHHHHHCCCEEEE
Confidence 4679999999999999999999987432 2244444443322 4577888899998754
No 231
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=38.64 E-value=84 Score=27.43 Aligned_cols=45 Identities=13% Similarity=-0.084 Sum_probs=36.4
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCC------cEEEEEeCC
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTT------ETAIVWPVS 172 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~------~~~~V~~~~ 172 (932)
.++.|.|+.-......|++.+++...|.++++.... +-+.|+|..
T Consensus 26 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~ 76 (115)
T 2cpz_A 26 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDN 76 (115)
T ss_dssp CCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSS
T ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECC
Confidence 467899999888889999999999889988876543 357888864
No 232
>2l6f_A Focal adhesion kinase 1, linker1, paxillin, linke paxillin; FAT, FAK, LD2, LD4, fusion protein, chimera protei transferase,cell adhesion; NMR {Gallus gallus} PDB: 2l6g_A 2l6h_A
Probab=44.02 E-value=6.9 Score=38.73 Aligned_cols=18 Identities=61% Similarity=1.258 Sum_probs=7.1
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 002354 87 GDVGGGGGGGGGGNGGSD 104 (932)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~ 104 (932)
|.||.||.||.||.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~ 201 (215)
T 2l6f_A 184 GSGGSGGSGGSGGSGGSS 201 (215)
Confidence 333333334444444333
No 233
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=37.68 E-value=1.8e+02 Score=25.08 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=42.6
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcccccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (932)
.+++..|+.|+.-.-.+.++|++++.= +.+.|..|..... +.|.+..++.||+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~G---------e~L~Vl~dd~~a~---------~dI~~~~~~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPG---------EILEVWIDYPMSK---------ERIPETVKKLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTT---------CEEEEEESSCTHH---------HHHHHHHHHSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHH---------HHHHHHHHHCCCEEEEE
Confidence 679999999999999999999997431 2345555543322 67888999999987644
No 234
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=37.00 E-value=18 Score=35.61 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=34.0
Q ss_pred hhhHHHHHHHHhcC--CCeeEEEeecCCc-------------------------EEEEEeCCCcccc
Q 002354 138 GGCAASVKRILESQ--PQVSSASVNLTTE-------------------------TAIVWPVSKAKVI 177 (932)
Q Consensus 138 ~~Ca~~Ie~~L~~~--~GV~~~~Vn~~~~-------------------------~~~V~~~~~~~~~ 177 (932)
++|=|-+|..+.++ +||.++.+=++.+ .+.|.|||..++.
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy 92 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITL 92 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCH
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCH
Confidence 48999999999999 9999988877655 2788999999886
No 235
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=36.07 E-value=40 Score=33.30 Aligned_cols=56 Identities=14% Similarity=0.261 Sum_probs=42.7
Q ss_pred eEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 002354 700 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAEYVASLVGIP 759 (932)
Q Consensus 700 ~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 759 (932)
..+.+..||+++- .+..-+.+.++++.|++.|+++.++| |++.........++|++
T Consensus 4 k~i~fDlDGTLl~----~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 4 KNVICDIDGVLMH----DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CEEEEECBTTTEE----TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cEEEEcCcceEEe----CCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 4567777887763 23333444889999999999999999 88888887777778875
No 236
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=36.00 E-value=1.3e+02 Score=32.69 Aligned_cols=90 Identities=11% Similarity=0.034 Sum_probs=64.2
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCCCCC---ceecccChhhHH
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK------------KNSAEYVASLVGIPKD---KVLSGVKPNEKK 773 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~------------~~~a~~ia~~~gi~~~---~v~~~~~p~~K~ 773 (932)
..++.++.-|++-.|=+..|++.++.|..++++||+- ...=..++.++|++-- .+.+.++|++=.
T Consensus 53 ~~v~~lG~FDg~H~GHq~lI~~a~~~~~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~GvD~vielpF~~~~s~~~Fv 132 (357)
T 3gmi_A 53 KIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMGSGQYM 132 (357)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHHTSSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSCHHHHH
T ss_pred CEEEEEEecCccCHHHHHHHHHHHHcCCeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHCCCCEEEEcCchhhCCHHHHH
Confidence 3567889999999999999999998888899999875 3555678888998621 122558888643
Q ss_pred H-HHHHHhhCCCEEEEEcCCcccHHHH
Q 002354 774 R-FINELQNDENVVAMVGDGINDAAAL 799 (932)
Q Consensus 774 ~-~v~~l~~~g~~v~~vGDg~ND~~al 799 (932)
+ .|..+.+.+-..+.+|. .+|....
T Consensus 133 ~~~v~ll~~l~~~~iv~G~-~~~~~~~ 158 (357)
T 3gmi_A 133 RCLIKMFYSLGAEIIPRGY-IPEKTME 158 (357)
T ss_dssp HHHHHHHHHHTCCEEEEEE-CCCHHHH
T ss_pred HHHHHHHHHcCCCEEEECC-CCchhHH
Confidence 2 22344555666788888 5666533
No 237
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=35.68 E-value=1.3e+02 Score=25.99 Aligned_cols=69 Identities=14% Similarity=0.035 Sum_probs=53.3
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEE-----eecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSAS-----VNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~-----Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
.+++.|+|--.+-++- -.+-+.|.+++||..++ +|-.+..+.|.......+. +++.++|++.|-..
T Consensus 6 irRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~--------d~I~~~IE~~Gg~I 76 (97)
T 2raq_A 6 LIRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDF--------DEITRAIESYGGSI 76 (97)
T ss_dssp EEEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCH--------HHHHHHHHHTTCEE
T ss_pred ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCH--------HHHHHHHHHcCCeE
Confidence 5678888876655554 46788999999998765 5567888888887777776 89999999999865
Q ss_pred ccc
Q 002354 200 SLR 202 (932)
Q Consensus 200 ~~~ 202 (932)
.-.
T Consensus 77 HSI 79 (97)
T 2raq_A 77 HSV 79 (97)
T ss_dssp EEE
T ss_pred Eee
Confidence 533
No 238
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=35.64 E-value=2.3e+02 Score=25.49 Aligned_cols=50 Identities=12% Similarity=0.032 Sum_probs=41.7
Q ss_pred CccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCc-EEEEEeCCC
Q 002354 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTE-TAIVWPVSK 173 (932)
Q Consensus 124 ~~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~-~~~V~~~~~ 173 (932)
....+.+.|.++...--...++...++...|.++.+....+ .+-|+|+..
T Consensus 22 ps~vl~l~V~NL~~~vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~ 72 (124)
T 2e5i_A 22 GNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESV 72 (124)
T ss_dssp CCSEEEEEEESCCSCCCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSH
T ss_pred CCcEEEEEEcCcCCCCCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCH
Confidence 34567889999999888899999999999999998865567 499998653
No 239
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=35.14 E-value=23 Score=36.84 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=46.8
Q ss_pred CeEEEEEECCEEEEEEEecccccHHHHHHHH--------HHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002354 699 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVN--------SLSSQGIGVYMLSGDKKNSAEYVASLVGIP 759 (932)
Q Consensus 699 ~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~--------~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 759 (932)
...+.+..||+++-. .+.+...+++. .+++.|++++++||++......+.+++|++
T Consensus 22 ~kliifDlDGTLlds-----~i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~ 85 (289)
T 3gyg_A 22 QYIVFCDFDETYFPH-----TIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFR 85 (289)
T ss_dssp SEEEEEETBTTTBCS-----SCCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCC
T ss_pred CeEEEEECCCCCcCC-----CCCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccC
Confidence 467888889988742 26777888887 567899999999999999999999999985
No 240
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=33.11 E-value=2.1e+02 Score=26.13 Aligned_cols=71 Identities=13% Similarity=0.049 Sum_probs=49.4
Q ss_pred HHhCCCeEEEEEE--------------CCEEEEEEEecccccHHHHHHHHHHHhCCC--eEEEEcCCC------HHHHHH
Q 002354 694 EDLMNQSLVYVGV--------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGI--GVYMLSGDK------KNSAEY 751 (932)
Q Consensus 694 ~~~~g~~~~~va~--------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi--~v~~~TGd~------~~~a~~ 751 (932)
.+..|..+++++. +-.++|+-.+...-.+..++.++.|+++|. ..+++-|-. ......
T Consensus 27 l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~ 106 (137)
T 1ccw_A 27 FTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEK 106 (137)
T ss_dssp HHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHH
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHH
Confidence 3456777777664 345788877778888889999999999886 245666643 233456
Q ss_pred HHHHcCCCCCceecc
Q 002354 752 VASLVGIPKDKVLSG 766 (932)
Q Consensus 752 ia~~~gi~~~~v~~~ 766 (932)
.++++|++ .+|..
T Consensus 107 ~~~~~G~d--~~~~~ 119 (137)
T 1ccw_A 107 RFKDMGYD--RVYAP 119 (137)
T ss_dssp HHHHTTCS--EECCT
T ss_pred HHHHCCCC--EEECC
Confidence 78999997 56643
No 241
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=32.68 E-value=94 Score=31.95 Aligned_cols=104 Identities=18% Similarity=0.137 Sum_probs=66.5
Q ss_pred cHHHHHHHHHHHhCCCeEEEEcCC----------CHHHHHHHHHHcCCCCCce---ecccChhhHHHHHHHHhhCCCEEE
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLSGD----------KKNSAEYVASLVGIPKDKV---LSGVKPNEKKRFINELQNDENVVA 787 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~TGd----------~~~~a~~ia~~~gi~~~~v---~~~~~p~~K~~~v~~l~~~g~~v~ 787 (932)
++-.++-|+.+|+.|+.+. ||. ....-...|+++|++.-++ +-.+++++|.++|+..++.|-+|.
T Consensus 54 ~~~l~eki~l~~~~gV~v~--~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~ 131 (251)
T 1qwg_A 54 RDVVKEKINYYKDWGIKVY--PGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVL 131 (251)
T ss_dssp HHHHHHHHHHHHTTTCEEE--ECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHcCCeEE--CCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEe
Confidence 4448889999999998755 666 4445577899999874333 345889999999999999998875
Q ss_pred EEcCCcccHHHHHhCCeeEEecCchHHHHhhcCEEEeCCC
Q 002354 788 MVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 827 (932)
Q Consensus 788 ~vGDg~ND~~al~~A~vgIa~~~~~~~a~~~ad~vl~~~~ 827 (932)
. .=|.-|.++=..-+..=-+..+......-||.|+...+
T Consensus 132 ~-EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEar 170 (251)
T 1qwg_A 132 T-EVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGR 170 (251)
T ss_dssp E-EECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred e-eccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 5 22344443322222211112233344456888887553
No 242
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=32.35 E-value=43 Score=29.06 Aligned_cols=69 Identities=13% Similarity=0.011 Sum_probs=51.0
Q ss_pred ccEEEEEecCCCChhhHHHHHHHHhcCCCeeEEE-----eecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccc
Q 002354 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSAS-----VNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (932)
Q Consensus 125 ~~~~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~-----Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (932)
.+++.|+|--.+-++- -.+.+.|.+++||..++ +|..+..+.|.......+. +++.++|++.|-..
T Consensus 6 iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdf--------d~I~~~IE~~GgvI 76 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDY--------EQIKGVIEDMGGVI 76 (100)
T ss_dssp EEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECH--------HHHHHHHHTTTCEE
T ss_pred ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCH--------HHHHHHHHHcCCeE
Confidence 4677777775555554 46788999999998875 4557777777776666665 89999999999765
Q ss_pred ccc
Q 002354 200 SLR 202 (932)
Q Consensus 200 ~~~ 202 (932)
.-.
T Consensus 77 HSI 79 (100)
T 3bpd_A 77 HSV 79 (100)
T ss_dssp EEE
T ss_pred Eee
Confidence 433
No 243
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=30.75 E-value=1.5e+02 Score=31.41 Aligned_cols=89 Identities=12% Similarity=0.224 Sum_probs=53.4
Q ss_pred hCCCeEEEEEECC-EEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc----Chh
Q 002354 696 LMNQSLVYVGVDN-MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV----KPN 770 (932)
Q Consensus 696 ~~g~~~~~va~~~-~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~----~p~ 770 (932)
..|..++++..+. .-+| + .+...++++-|.+. ..++++=......+..+|+..+++ .|=+.. -|-
T Consensus 62 ~LGg~~i~l~~~~~s~~~----k---gEsl~DTarvls~~-~D~iviR~~~~~~~~~la~~~~vP--VINaG~g~~~HPt 131 (299)
T 1pg5_A 62 NLGGDVIGFSGEESTSVA----K---GENLADTIRMLNNY-SDGIVMRHKYDGASRFASEISDIP--VINAGDGKHEHPT 131 (299)
T ss_dssp HTTCEEEEEECC--------------CCCHHHHHHHHHHH-CSEEEEEESSBTHHHHHHHHCSSC--EEEEEETTTBCHH
T ss_pred HhCCEEEEeCCCCccccc----C---CCCHHHHHHHHHHh-CCEEEEeCCChhHHHHHHHhCCCC--EEeCCCCCCcCcH
Confidence 4577788776443 2333 2 34455556666666 467777777788899999999987 444423 243
Q ss_pred hH----HHHHHHHhh-CCCEEEEEcCCcc
Q 002354 771 EK----KRFINELQN-DENVVAMVGDGIN 794 (932)
Q Consensus 771 ~K----~~~v~~l~~-~g~~v~~vGDg~N 794 (932)
|= ..+.+.... +|.+|++|||+.|
T Consensus 132 Q~LaDl~Ti~e~~g~l~gl~va~vGD~~~ 160 (299)
T 1pg5_A 132 QAVIDIYTINKHFNTIDGLVFALLGDLKY 160 (299)
T ss_dssp HHHHHHHHHHHHHSCSTTCEEEEEECCSS
T ss_pred HHHHHHHHHHHHhCCcCCcEEEEECCCCC
Confidence 32 223333322 5789999999954
No 244
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=30.59 E-value=66 Score=27.77 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=50.1
Q ss_pred ccEEEEEecCC-CChhhHHHHHHHHhcCCCeeEEE-----eecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCcc
Q 002354 125 SDVIILDVGGM-TCGGCAASVKRILESQPQVSSAS-----VNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFK 198 (932)
Q Consensus 125 ~~~~~l~V~GM-~C~~Ca~~Ie~~L~~~~GV~~~~-----Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~ 198 (932)
.+++.|+|--. +-++- -.+.+.|.+++||..++ ++-.+....|.......+. +++.++|++.|-.
T Consensus 4 irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idf--------d~I~~~IE~~Gg~ 74 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNF--------DDIRKMLEEEGCA 74 (96)
T ss_dssp EEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCH--------HHHHHHHHHTTCE
T ss_pred eEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCH--------HHHHHHHHHcCCe
Confidence 35666666544 44444 46788999999998775 4557777777777666666 8999999999986
Q ss_pred ccccc
Q 002354 199 SSLRD 203 (932)
Q Consensus 199 ~~~~~ 203 (932)
..-.+
T Consensus 75 IHSID 79 (96)
T 2x3d_A 75 IHSID 79 (96)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 65433
No 245
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=30.48 E-value=4.6e+02 Score=26.97 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=54.2
Q ss_pred ecccccHHHHHHHHHHHhCCCeEE-EEcCC-CHHHHHHHHHHcCCCCCceec--c--c------ChhhHHHHHHHHhhCC
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIGVY-MLSGD-KKNSAEYVASLVGIPKDKVLS--G--V------KPNEKKRFINELQNDE 783 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~v~-~~TGd-~~~~a~~ia~~~gi~~~~v~~--~--~------~p~~K~~~v~~l~~~g 783 (932)
+-|-.-++..+.++.+++.|++.+ +++-. +.+..+.+++...= -+|. . . .+++-.+.++.+++.-
T Consensus 129 i~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~g---fvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~ 205 (267)
T 3vnd_A 129 IADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEG---YTYLLSRAGVTGTESKAGEPIENILTQLAEFN 205 (267)
T ss_dssp ETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCS---CEEESCCCCCC--------CHHHHHHHHHTTT
T ss_pred eCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCC---cEEEEecCCCCCCccCCcHHHHHHHHHHHHhc
Confidence 356666789999999999999855 55543 45778888887631 1332 1 1 1333457788888766
Q ss_pred CEEEEEcCCcccHHHHH
Q 002354 784 NVVAMVGDGINDAAALA 800 (932)
Q Consensus 784 ~~v~~vGDg~ND~~al~ 800 (932)
..-..+|=|+++..-.+
T Consensus 206 ~~pv~vGfGI~~~e~~~ 222 (267)
T 3vnd_A 206 APPPLLGFGIAEPEQVR 222 (267)
T ss_dssp CCCEEECSSCCSHHHHH
T ss_pred CCCEEEECCcCCHHHHH
Confidence 66778899988765543
No 246
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=30.01 E-value=1.4e+02 Score=28.17 Aligned_cols=69 Identities=13% Similarity=0.077 Sum_probs=46.6
Q ss_pred EEEEEEEecccccHHHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCCCceecc-cChhhHHHHHHHH
Q 002354 709 MLAGLIYVEDRIRDDAAHVVNSLSSQGI--GVYMLSGDKKNSAEYVASLVGIPKDKVLSG-VKPNEKKRFINEL 779 (932)
Q Consensus 709 ~~lG~i~l~D~lr~~~~~~i~~L~~~Gi--~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~-~~p~~K~~~v~~l 779 (932)
.++|+-.+...-.+..++.++.|++.|. -.+++-|-....-...+++.|.+ .+|.. ..+++=.+.++.+
T Consensus 71 diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d--~v~~~~~~~~~~~~~~~~~ 142 (161)
T 2yxb_A 71 DVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIR--EIFLPGTSLGEIIEKVRKL 142 (161)
T ss_dssp SEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCC--EEECTTCCHHHHHHHHHHH
T ss_pred CEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCc--EEECCCCCHHHHHHHHHHH
Confidence 4677777777888999999999999885 24566675544444467899997 66753 3334444444444
No 247
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=29.89 E-value=1e+02 Score=30.28 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHHHHhhCCCEEEEEcCC--cccHHHH
Q 002354 722 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDG--INDAAAL 799 (932)
Q Consensus 722 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg--~ND~~al 799 (932)
+++.+..+++ +.|.++++--| .||..+-+.++++ .+--..+..|-.+.++..++.+.+++.||-+ .+++..+
T Consensus 39 ~~~v~~a~~~-~~~~dVIISRG---gta~~lr~~~~iP--VV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~ 112 (196)
T 2q5c_A 39 TRASKIAFGL-QDEVDAIISRG---ATSDYIKKSVSIP--SISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEI 112 (196)
T ss_dssp HHHHHHHHHH-TTTCSEEEEEH---HHHHHHHTTCSSC--EEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHH
T ss_pred HHHHHHHHHh-cCCCeEEEECC---hHHHHHHHhCCCC--EEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHH
Confidence 4455666677 88999777766 5667777788887 7888999999999999999988899998764 4444433
No 248
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=29.75 E-value=1.8e+02 Score=29.57 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=64.2
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecccChhhHHHHHH----HHhhCCCEEEEEcCCcccHHH-
Q 002354 724 AAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFIN----ELQNDENVVAMVGDGINDAAA- 798 (932)
Q Consensus 724 ~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~----~l~~~g~~v~~vGDg~ND~~a- 798 (932)
-.+.++++++.++.++|+|+........-+.+.|.+ .+...-.+..-...+. .......+|+.|-|.......
T Consensus 63 G~~~~~~lr~~~~pvi~lt~~~~~~~~~~a~~~Ga~--dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l 140 (259)
T 3luf_A 63 SGEAVKVLLERGLPVVILTADISEDKREAWLEAGVL--DYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRT 140 (259)
T ss_dssp TSHHHHHHHHTTCCEEEEECC-CHHHHHHHHHTTCC--EEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHCCCc--EEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHH
Confidence 357788888889999999999888878888899986 4554433333222222 223456789999997665543
Q ss_pred ---HHhCCeeEEec-CchHHH---Hhh--cCEEEeCCCh
Q 002354 799 ---LASSHIGVAMG-GGVGAA---SEV--ASVVLMGNRL 828 (932)
Q Consensus 799 ---l~~A~vgIa~~-~~~~~a---~~~--ad~vl~~~~~ 828 (932)
|+..+.-+... ++.+.. .+. -|+++++-++
T Consensus 141 ~~~L~~~~~~v~~a~~~~eal~~l~~~~~~dlvllD~~m 179 (259)
T 3luf_A 141 MAQLRKQLLQVHEASHAREALATLEQHPAIRLVLVDYYM 179 (259)
T ss_dssp HHHHHTTTCEEEEESSHHHHHHHHHHCTTEEEEEECSCC
T ss_pred HHHHHHcCcEEEEeCCHHHHHHHHhcCCCCCEEEEcCCC
Confidence 34445444443 443322 222 4789987444
No 249
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=29.70 E-value=81 Score=33.49 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=75.5
Q ss_pred hCCCeEEEEEECCEEEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceeccc----Chhh
Q 002354 696 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV----KPNE 771 (932)
Q Consensus 696 ~~g~~~~~va~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~~----~p~~ 771 (932)
..|..++++..+..-+ .-.+...++++-|.+.|..++++=......+..+|+..+++ .|=+.. -|-|
T Consensus 60 ~LGg~~i~l~~~~ss~-------~kgEsl~DTarvLs~~~~D~iviR~~~~~~~~~la~~~~vP--VINagdg~~~HPtQ 130 (304)
T 3r7f_A 60 KLGMNVLNLDGTSTSV-------QKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIP--ILNAGDGCGQHPTQ 130 (304)
T ss_dssp HTTCEEEEEETTSTTS-------CSSSCHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHCSSC--EEESCCTTSCCHHH
T ss_pred HCCCeEEEECcccccC-------CCCCCHHHHHHHHHHhcCCEEEEecCChhHHHHHHHhCCCC--EEeCCCCCCcCcHH
Confidence 3466666664322111 12566778888899999998888888888999999999987 343322 2544
Q ss_pred HH----HHHHHHhh-CCCEEEEEcCCccc------HHHHHhCCeeEEec---------------CchHHHHhhcCEEEeC
Q 002354 772 KK----RFINELQN-DENVVAMVGDGIND------AAALASSHIGVAMG---------------GGVGAASEVASVVLMG 825 (932)
Q Consensus 772 K~----~~v~~l~~-~g~~v~~vGDg~ND------~~al~~A~vgIa~~---------------~~~~~a~~~ad~vl~~ 825 (932)
=+ .+.+.+.. +|.+|++|||+.|- +.++..-++-+.+. ...+.+.+.||+|.++
T Consensus 131 aLaDl~Ti~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~ 210 (304)
T 3r7f_A 131 SLLDLMTIYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLL 210 (304)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEec
Confidence 32 23333221 47899999999652 23444444444331 1234667789999885
No 250
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.06 E-value=1.9e+02 Score=24.79 Aligned_cols=55 Identities=22% Similarity=0.172 Sum_probs=44.1
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC 195 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~ 195 (932)
.++.|.|+.-......|++.+++.-.|.++++... +-+.|+|... +...++++.+
T Consensus 16 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~~~i~~~-g~afV~f~~~------------~~a~~Ai~~l 70 (108)
T 1x4c_A 16 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-GTGVVEFVRK------------EDMTYAVRKL 70 (108)
T ss_dssp CEEEEESCCSSCCHHHHHHHHGGGSCEEEEEEETT-TEEEEEESSH------------HHHHHHHHHS
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEeEEEEecC-CEEEEEECCH------------HHHHHHHHHH
Confidence 56789999888888999999999988999888766 8899998753 4566677654
No 251
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=27.31 E-value=1.4e+02 Score=33.77 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceec--ccChhhH---HHHHHHHhhCCCEEEEE
Q 002354 723 DAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS--GVKPNEK---KRFINELQNDENVVAMV 789 (932)
Q Consensus 723 ~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~--~~~p~~K---~~~v~~l~~~g~~v~~v 789 (932)
...+.=+.|++.|+++++..|+.......++++.|+. .|++ ...|.++ .++-+.+++.|-.+-.+
T Consensus 58 sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~--~v~~~~~~~p~~~~rd~~v~~~l~~~gi~~~~~ 127 (484)
T 1owl_A 58 CLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAE--AVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQL 127 (484)
T ss_dssp HHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCS--EEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC--EEEEeccCChhHHHHHHHHHHHHHHcCcEEEEe
Confidence 3444456678889999999999999999999999997 6776 3455443 34445566666555544
No 252
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=25.42 E-value=2e+02 Score=30.53 Aligned_cols=71 Identities=14% Similarity=0.267 Sum_probs=44.0
Q ss_pred cHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCceecc----cChhhHH-HHHHHHhh----CCCEEEEEcC
Q 002354 721 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG----VKPNEKK-RFINELQN----DENVVAMVGD 791 (932)
Q Consensus 721 r~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~v~~~----~~p~~K~-~~v~~l~~----~g~~v~~vGD 791 (932)
.+...++++-|.+. ..++++=......+..+|+..+++ .|=+. --|-|=+ ++....++ +|.+|++|||
T Consensus 87 gEsl~DTarvls~~-~D~iviR~~~~~~~~~la~~~~vP--VINag~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD 163 (308)
T 1ml4_A 87 GESLRDTIKTVEQY-CDVIVIRHPKEGAARLAAEVAEVP--VINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGD 163 (308)
T ss_dssp TCCHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHTCSSC--EEEEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESC
T ss_pred CCCHHHHHHHHHHh-CcEEEEecCChhHHHHHHHhCCCC--EEeCccCCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 35566677777777 577777767778888888888876 33222 2243332 22222222 3678999999
Q ss_pred Ccc
Q 002354 792 GIN 794 (932)
Q Consensus 792 g~N 794 (932)
+.|
T Consensus 164 ~~~ 166 (308)
T 1ml4_A 164 LKY 166 (308)
T ss_dssp TTT
T ss_pred CCc
Confidence 964
No 253
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=25.39 E-value=1e+02 Score=32.41 Aligned_cols=67 Identities=25% Similarity=0.342 Sum_probs=48.6
Q ss_pred ecccccHHHHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCcee--cccChhhHHHHHHHHhhC
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSA------EYVASLVGIPKDKVL--SGVKPNEKKRFINELQND 782 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~---v~~~TGd~~~~a------~~ia~~~gi~~~~v~--~~~~p~~K~~~v~~l~~~ 782 (932)
+..++|++.++-++.|++.|.+ .+++-||++... ...|+++||....+. ...+.++-.+.|+.|.+.
T Consensus 12 ~a~~i~~~~~~~v~~l~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 89 (285)
T 3p2o_A 12 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHD 89 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567899999999999988875 356679888774 457888999633222 235667777888888775
No 254
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=24.86 E-value=1.1e+02 Score=32.02 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=47.4
Q ss_pred ecccccHHHHHHHHHHHhCCCe----EEEEcCCCHHHH------HHHHHHcCCCCCcee--cccChhhHHHHHHHHhhC
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIG----VYMLSGDKKNSA------EYVASLVGIPKDKVL--SGVKPNEKKRFINELQND 782 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~----v~~~TGd~~~~a------~~ia~~~gi~~~~v~--~~~~p~~K~~~v~~l~~~ 782 (932)
+..++|++.++-+++|++.|.. .+++-||++... ...|+++||....+. ...+.++-.+.|+.|.+.
T Consensus 13 ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 91 (286)
T 4a5o_A 13 IAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDD 91 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4467899999999999987643 466778888774 456888999642222 245667777888888765
No 255
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=24.18 E-value=3e+02 Score=23.47 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=37.4
Q ss_pred EEEEecCCCCh-hhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCC
Q 002354 128 IILDVGGMTCG-GCAASVKRILESQPQVSSASVNLTTETAIVWPVSK 173 (932)
Q Consensus 128 ~~l~V~GM~C~-~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~ 173 (932)
.++.|.++.-. .-...|++.+++...|.++.+ ..+-+.|+|...
T Consensus 28 ~~l~V~nl~~~~~t~~~l~~~F~~~G~v~~v~i--~~g~afV~f~~~ 72 (110)
T 1wf1_A 28 SRVFIGNLNTALVKKSDVETIFSKYGRVAGCSV--HKGYAFVQYSNE 72 (110)
T ss_dssp SEEEECSCCCSSCCHHHHHHHHGGGSCCSEEEE--ETTEEEEECSSS
T ss_pred cEEEEeCCCcccCCHHHHHHHHHhCCCeEEEEE--eCCEEEEEECCH
Confidence 46789999887 778899999999999999888 578899998754
No 256
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=24.13 E-value=1.4e+02 Score=30.34 Aligned_cols=69 Identities=17% Similarity=0.091 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCeEEEE---c----------CCCHHHHHHHHHHcCCCCCceecccChh---hHHHHHHHHhhCCCE
Q 002354 722 DDAAHVVNSLSSQGIGVYML---S----------GDKKNSAEYVASLVGIPKDKVLSGVKPN---EKKRFINELQNDENV 785 (932)
Q Consensus 722 ~~~~~~i~~L~~~Gi~v~~~---T----------Gd~~~~a~~ia~~~gi~~~~v~~~~~p~---~K~~~v~~l~~~g~~ 785 (932)
.|..-++..++++|++|+-+ . +.+...++.+|+.+||+ .....+..+ .-..+.+.+++.|-.
T Consensus 15 kDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIp--l~~v~~~g~~~~e~e~l~~~l~~~~i~ 92 (237)
T 3rjz_A 15 KDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIP--LVKGFTQGEKEKEVEDLKRVLSGLKIQ 92 (237)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCC--EEEEEC------CHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCC--EEEEECCCCchHHHHHHHHHHHhcCCc
Confidence 34455666777888876433 1 22356788999999997 333333211 123444555554555
Q ss_pred EEEEcCC
Q 002354 786 VAMVGDG 792 (932)
Q Consensus 786 v~~vGDg 792 (932)
...+||=
T Consensus 93 ~vv~Gdi 99 (237)
T 3rjz_A 93 GIVAGAL 99 (237)
T ss_dssp EEECC--
T ss_pred EEEECCc
Confidence 6666663
No 257
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=23.62 E-value=2.8e+02 Score=29.41 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=55.4
Q ss_pred hCCCeEEEEEECCE--EEEEEEecccccHHHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCCCCceecc----cC
Q 002354 696 LMNQSLVYVGVDNM--LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV-GIPKDKVLSG----VK 768 (932)
Q Consensus 696 ~~g~~~~~va~~~~--~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~~-gi~~~~v~~~----~~ 768 (932)
..|..++++..+.. -+| -.+...++.+-|.+. ..++++=......+..+|+.. +++ .|=+. --
T Consensus 65 ~LGg~~i~l~~~~~~S~~~-------kgEsl~DTarvls~~-~D~iviR~~~~~~~~~la~~~~~vP--VINag~G~~~H 134 (310)
T 3csu_A 65 RLGASVVGFSDSANTSLGK-------KGETLADTISVISTY-VDAIVMRHPQEGAARLATEFSGNVP--VLNAGDGSNQH 134 (310)
T ss_dssp TTTCEEEEESCC-----CC-------SHHHHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHHCTTCC--EEEEEETTSCC
T ss_pred HhCCeEEEeCCCccchhhc-------cCCcHHHHHHHHHHh-CCEEEEECCChhHHHHHHHhcCCCC--EEcCccCCCCC
Confidence 44666777643332 222 356677778888777 577777777888899999998 886 33222 22
Q ss_pred hhhH----HHHHHHHhh-CCCEEEEEcCCcc
Q 002354 769 PNEK----KRFINELQN-DENVVAMVGDGIN 794 (932)
Q Consensus 769 p~~K----~~~v~~l~~-~g~~v~~vGDg~N 794 (932)
|-|= ..+.+.... +|.+|++|||+.|
T Consensus 135 PtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~ 165 (310)
T 3csu_A 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKY 165 (310)
T ss_dssp HHHHHHHHHHHHHHHSCSSSCEEEEESCTTT
T ss_pred chHHHHHHHHHHHHhCCcCCcEEEEECCCCC
Confidence 4433 223333322 5789999999865
No 258
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=21.61 E-value=2.3e+02 Score=32.20 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCCCCceecc--cChhhH---HHHHHHHhhCCCEEEEEcC
Q 002354 725 AHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIPKDKVLSG--VKPNEK---KRFINELQNDENVVAMVGD 791 (932)
Q Consensus 725 ~~~i~~L~~~Gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~v~~~--~~p~~K---~~~v~~l~~~g~~v~~vGD 791 (932)
.+.=+.|++.|+++++.. ||.......++++.|+. .|+++ ..|... .++.+.+++.|-.+-.+-|
T Consensus 68 ~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~--~V~~~~~~~p~~~~rd~~v~~~l~~~gi~~~~~~~ 138 (509)
T 1u3d_A 68 AQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGAS--QIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNA 138 (509)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCC--EEEEECCCSHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCC--EEEEecccCHHHHHHHHHHHHHHHHcCcEEEEECC
Confidence 333456788999999998 57888899999999997 77765 556543 2344556666765555533
No 259
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=21.56 E-value=62 Score=26.59 Aligned_cols=56 Identities=11% Similarity=0.141 Sum_probs=40.0
Q ss_pred EEEEecCCCChhhHHHHHHHHhcCCCeeEEEeecCCcEEEEEeCCCccccchhhhhhHHHHHHHHHhcCccccc
Q 002354 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (932)
Q Consensus 128 ~~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~~~~~~V~~~~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (932)
.+++..|+.|+.-.-.+.++|++++.=+ .+.|..|.... . +.+.+..++.||+...
T Consensus 7 ~~lD~rGl~CP~Pvl~~k~al~~l~~G~---------~L~V~~dd~~a-~--------~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 7 RVIDARGSYCPGPLMELIKAYKQAKVGE---------VISVYSTDAGT-K--------KDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCCBSSCSSCTTHHHHHHHHTTSCTTC---------CEECCBSSSCH-H--------HHHHHHHHHHTEEECC
T ss_pred EEEECCCCCCCHHHHHHHHHHHcCCCCC---------EEEEEECCccH-H--------HHHHHHHHHCCCEEEE
Confidence 3588999999999999999999974321 23344343321 1 5688888999998754
No 260
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=20.80 E-value=1.4e+02 Score=31.36 Aligned_cols=68 Identities=25% Similarity=0.322 Sum_probs=49.2
Q ss_pred ecccccHHHHHHHHHHHhCCCe---EEEEcCCCHHHHHH------HHHHcCCCCCce--ecccChhhHHHHHHHHhhCC
Q 002354 716 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAEY------VASLVGIPKDKV--LSGVKPNEKKRFINELQNDE 783 (932)
Q Consensus 716 l~D~lr~~~~~~i~~L~~~Gi~---v~~~TGd~~~~a~~------ia~~~gi~~~~v--~~~~~p~~K~~~v~~l~~~g 783 (932)
+..+++++.++-++.|++.|.+ .+++-||++....+ .|+++||....+ -...+.++-.+.|+.|.+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~ 89 (281)
T 2c2x_A 11 TRDEIFGDLKQRVAALDAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANP 89 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4567899999999999998874 45667988876544 588899963222 23456677778888887764
No 261
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=20.62 E-value=55 Score=31.98 Aligned_cols=28 Identities=25% Similarity=0.465 Sum_probs=23.4
Q ss_pred CcEEEEeCCCccCCCEEEEcCCCEEeee
Q 002354 375 DSIIEVPCNSLHVGDHIVVLPGDRIPAD 402 (932)
Q Consensus 375 g~~~~V~~~~Lv~GDiV~v~~Ge~IPaD 402 (932)
|+.+.+++++|++||.|.+..+..++.|
T Consensus 111 g~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 111 GEVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp TEEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred CeEEEEEhhcCCCCCEEEecccCCccce
Confidence 4677899999999999999877666655
No 262
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.22 E-value=2.9e+02 Score=22.57 Aligned_cols=44 Identities=11% Similarity=0.120 Sum_probs=35.8
Q ss_pred EEEecCCCChhhHHHHHHHHhcCCCeeEEEeecC------CcEEEEEeCC
Q 002354 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLT------TETAIVWPVS 172 (932)
Q Consensus 129 ~l~V~GM~C~~Ca~~Ie~~L~~~~GV~~~~Vn~~------~~~~~V~~~~ 172 (932)
++.|.|+.-......|++.+++...|.++++... .+-+.|+|..
T Consensus 18 ~l~V~nlp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~ 67 (94)
T 2e5h_A 18 TVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLD 67 (94)
T ss_dssp SEEEESCCTTSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESC
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECC
Confidence 4678999988888999999999999998888553 3468888864
Done!