Query 002356
Match_columns 931
No_of_seqs 637 out of 4586
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 22:11:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002356.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002356hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0598 Ribosomal protein S6 k 100.0 1.9E-47 4.2E-52 403.9 20.2 234 665-927 21-255 (357)
2 KOG0616 cAMP-dependent protein 100.0 1.5E-46 3.3E-51 383.2 20.2 231 666-928 41-271 (355)
3 KOG0605 NDR and related serine 100.0 1E-45 2.2E-50 405.2 22.3 264 665-930 137-422 (550)
4 KOG0610 Putative serine/threon 100.0 6.9E-45 1.5E-49 386.8 23.1 284 643-926 50-363 (459)
5 KOG0595 Serine/threonine-prote 100.0 9E-45 1.9E-49 386.2 22.7 217 668-915 9-231 (429)
6 KOG0575 Polo-like serine/threo 100.0 2.4E-44 5.3E-49 400.5 21.9 230 669-927 18-247 (592)
7 KOG0592 3-phosphoinositide-dep 100.0 1.2E-43 2.6E-48 388.2 19.4 247 666-928 70-317 (604)
8 KOG0615 Serine/threonine prote 100.0 3E-44 6.5E-49 381.1 12.9 233 667-929 170-415 (475)
9 KOG0591 NIMA (never in mitosis 100.0 2.8E-44 6.1E-49 363.5 10.0 224 667-918 17-249 (375)
10 KOG0694 Serine/threonine prote 100.0 3.3E-42 7.1E-47 387.4 19.5 236 664-929 363-599 (694)
11 KOG0581 Mitogen-activated prot 100.0 1.2E-41 2.5E-46 360.0 20.6 229 665-927 75-311 (364)
12 KOG0597 Serine-threonine prote 100.0 8.8E-41 1.9E-45 364.7 16.9 226 669-925 2-227 (808)
13 KOG0611 Predicted serine/threo 100.0 7.5E-41 1.6E-45 351.8 15.4 232 668-929 52-284 (668)
14 KOG0588 Serine/threonine prote 100.0 4.3E-40 9.3E-45 366.8 17.7 231 668-928 11-242 (786)
15 KOG0593 Predicted protein kina 100.0 3.4E-40 7.4E-45 337.1 14.3 214 669-912 2-216 (396)
16 KOG0583 Serine/threonine prote 100.0 3.9E-39 8.5E-44 361.4 24.1 228 666-922 14-247 (370)
17 KOG0580 Serine/threonine prote 100.0 2.8E-40 6E-45 328.6 12.9 233 666-927 19-251 (281)
18 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-39 3.1E-44 350.4 18.5 236 664-924 92-345 (576)
19 KOG0600 Cdc2-related protein k 100.0 4.6E-39 9.9E-44 349.6 17.8 218 666-912 114-334 (560)
20 KOG0690 Serine/threonine prote 100.0 8.8E-40 1.9E-44 335.6 11.4 234 665-927 164-397 (516)
21 cd05628 STKc_NDR1 Catalytic do 100.0 1.4E-37 3E-42 353.1 25.8 259 669-929 1-269 (363)
22 KOG0582 Ste20-like serine/thre 100.0 1.5E-37 3.2E-42 333.2 23.2 240 662-926 19-260 (516)
23 KOG0033 Ca2+/calmodulin-depend 100.0 2.1E-39 4.7E-44 321.7 7.0 223 666-919 8-233 (355)
24 KOG0661 MAPK related serine/th 100.0 1.2E-38 2.7E-43 343.8 13.3 215 666-912 7-224 (538)
25 KOG0659 Cdk activating kinase 100.0 1.7E-37 3.6E-42 312.9 19.9 223 669-921 2-230 (318)
26 KOG0612 Rho-associated, coiled 100.0 9E-39 1.9E-43 373.7 12.0 237 665-929 71-314 (1317)
27 PTZ00263 protein kinase A cata 100.0 2.4E-37 5.1E-42 346.4 22.3 226 666-923 15-240 (329)
28 cd05612 STKc_PRKX_like Catalyt 100.0 2.6E-37 5.7E-42 339.9 22.0 224 669-924 1-224 (291)
29 PTZ00426 cAMP-dependent protei 100.0 6E-37 1.3E-41 344.4 22.7 228 665-924 26-254 (340)
30 cd05626 STKc_LATS2 Catalytic d 100.0 1E-36 2.2E-41 348.4 24.7 258 670-929 2-281 (381)
31 cd05625 STKc_LATS1 Catalytic d 100.0 9.8E-37 2.1E-41 348.7 24.4 258 670-929 2-281 (382)
32 cd05599 STKc_NDR_like Catalyti 100.0 8.8E-37 1.9E-41 346.7 23.4 258 669-928 1-271 (364)
33 cd05629 STKc_NDR_like_fungal C 100.0 6.4E-37 1.4E-41 349.6 21.7 256 669-926 1-278 (377)
34 KOG0192 Tyrosine kinase specif 100.0 1.1E-36 2.4E-41 338.4 22.7 236 664-928 36-278 (362)
35 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-36 2.5E-41 340.0 22.1 222 675-925 1-222 (323)
36 KOG0198 MEKK and related serin 100.0 3.9E-37 8.5E-42 332.0 17.2 230 668-925 16-252 (313)
37 KOG0578 p21-activated serine/t 100.0 4.8E-37 1E-41 339.8 17.3 230 668-930 272-502 (550)
38 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-36 3.1E-41 345.3 21.6 232 666-926 40-277 (370)
39 cd05598 STKc_LATS Catalytic do 100.0 1.9E-36 4.1E-41 345.6 22.5 257 669-927 1-275 (376)
40 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-36 3.6E-41 343.9 21.8 259 669-929 1-269 (360)
41 KOG0663 Protein kinase PITSLRE 100.0 5.6E-37 1.2E-41 317.6 16.0 217 666-912 73-292 (419)
42 KOG0589 Serine/threonine prote 100.0 3.3E-37 7.2E-42 340.2 15.3 231 668-926 3-235 (426)
43 cd05622 STKc_ROCK1 Catalytic d 100.0 2.8E-36 6E-41 343.1 23.0 233 665-926 39-277 (371)
44 cd05585 STKc_YPK1_like Catalyt 100.0 3.7E-36 7.9E-41 334.3 23.1 220 677-925 1-220 (312)
45 cd05596 STKc_ROCK Catalytic do 100.0 2.8E-36 6.1E-41 343.1 22.4 235 665-928 39-279 (370)
46 KOG0032 Ca2+/calmodulin-depend 100.0 3.6E-36 7.8E-41 337.2 22.8 224 667-921 33-261 (382)
47 cd05595 STKc_PKB_beta Catalyti 100.0 5.4E-36 1.2E-40 334.5 23.2 221 675-924 1-221 (323)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 6.3E-36 1.4E-40 334.7 22.8 220 675-923 1-220 (328)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.7E-36 1.7E-40 334.8 23.4 213 669-913 1-213 (333)
50 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-36 3.7E-41 335.3 17.7 238 662-930 199-438 (468)
51 cd05616 STKc_cPKC_beta Catalyt 100.0 8.4E-36 1.8E-40 333.0 23.2 226 670-924 1-227 (323)
52 cd05587 STKc_cPKC Catalytic do 100.0 1E-35 2.2E-40 332.5 23.8 226 670-924 1-227 (324)
53 KOG0667 Dual-specificity tyros 100.0 2.1E-36 4.5E-41 341.3 17.8 208 670-912 187-402 (586)
54 cd05615 STKc_cPKC_alpha Cataly 100.0 1.7E-35 3.6E-40 330.6 23.8 226 670-924 1-227 (323)
55 cd05589 STKc_PKN Catalytic dom 100.0 1.4E-35 3E-40 331.4 22.8 224 671-924 1-227 (324)
56 cd05631 STKc_GRK4 Catalytic do 100.0 1.7E-35 3.6E-40 324.5 23.0 225 670-922 1-229 (285)
57 KOG0608 Warts/lats-like serine 100.0 1.7E-36 3.6E-41 333.9 14.5 262 666-929 626-904 (1034)
58 KOG0696 Serine/threonine prote 100.0 8.6E-37 1.9E-41 321.8 11.5 236 664-928 344-580 (683)
59 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-35 3.1E-40 314.1 20.9 216 668-912 10-235 (323)
60 KOG4717 Serine/threonine prote 100.0 3.6E-36 7.7E-41 324.5 16.4 231 668-928 17-249 (864)
61 cd05590 STKc_nPKC_eta Catalyti 100.0 2.1E-35 4.5E-40 329.4 22.9 221 675-924 1-222 (320)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.8E-36 2.1E-40 336.1 20.3 256 669-926 1-260 (350)
63 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-35 5.2E-40 329.1 22.8 220 675-923 1-221 (321)
64 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-35 2.8E-40 331.8 20.7 220 675-923 1-221 (325)
65 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-35 6.8E-40 327.4 23.4 220 675-923 1-221 (316)
66 KOG0599 Phosphorylase kinase g 100.0 2.1E-36 4.5E-41 304.5 12.4 221 668-918 16-248 (411)
67 KOG0986 G protein-coupled rece 100.0 1.4E-36 2.9E-41 325.1 11.5 236 664-927 180-419 (591)
68 KOG0614 cGMP-dependent protein 100.0 4.1E-37 8.9E-42 332.1 7.4 236 664-929 415-652 (732)
69 cd05575 STKc_SGK Catalytic dom 100.0 3E-35 6.5E-40 328.6 22.2 221 675-924 1-222 (323)
70 cd05603 STKc_SGK2 Catalytic do 100.0 3.7E-35 8.1E-40 327.5 22.1 220 675-923 1-221 (321)
71 cd05602 STKc_SGK1 Catalytic do 100.0 4.4E-35 9.4E-40 327.6 22.5 222 675-925 1-223 (325)
72 cd05597 STKc_DMPK_like Catalyt 100.0 5.8E-35 1.3E-39 327.4 23.5 225 669-920 1-232 (331)
73 cd05584 STKc_p70S6K Catalytic 100.0 5.6E-35 1.2E-39 326.4 22.7 223 674-925 1-227 (323)
74 cd05620 STKc_nPKC_delta Cataly 100.0 7.5E-35 1.6E-39 324.3 23.3 220 675-923 1-221 (316)
75 cd05601 STKc_CRIK Catalytic do 100.0 2.8E-35 6.2E-40 329.7 19.5 231 669-926 1-239 (330)
76 cd05624 STKc_MRCK_beta Catalyt 100.0 4E-35 8.7E-40 328.7 20.3 225 669-920 1-232 (331)
77 cd05604 STKc_SGK3 Catalytic do 100.0 5.6E-35 1.2E-39 326.7 21.4 219 675-922 1-220 (325)
78 cd05588 STKc_aPKC Catalytic do 100.0 9.3E-35 2E-39 325.4 22.8 220 675-923 1-230 (329)
79 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-34 2.9E-39 322.6 23.5 221 675-924 1-222 (318)
80 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-34 3.2E-39 321.9 23.7 219 675-922 1-220 (316)
81 KOG0607 MAP kinase-interacting 100.0 3.5E-35 7.5E-40 301.7 15.6 225 671-920 79-328 (463)
82 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-34 2.4E-39 325.3 21.1 225 669-920 1-232 (332)
83 KOG0660 Mitogen-activated prot 100.0 4.6E-35 1E-39 308.8 16.8 216 668-912 21-242 (359)
84 cd05618 STKc_aPKC_iota Catalyt 100.0 2E-34 4.2E-39 322.8 23.0 220 675-923 1-230 (329)
85 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.5E-34 5.5E-39 321.6 23.0 221 675-924 1-229 (327)
86 cd05605 STKc_GRK4_like Catalyt 100.0 4.4E-34 9.5E-39 313.3 23.0 224 670-921 1-228 (285)
87 KOG0695 Serine/threonine prote 100.0 4.3E-35 9.4E-40 301.7 13.3 237 662-927 243-488 (593)
88 cd05614 STKc_MSK2_N N-terminal 100.0 4.4E-34 9.5E-39 320.4 22.7 226 670-923 1-236 (332)
89 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-34 3.7E-39 321.7 18.9 222 674-925 1-225 (318)
90 KOG0201 Serine/threonine prote 100.0 8.7E-36 1.9E-40 319.8 8.1 214 668-912 12-225 (467)
91 cd05608 STKc_GRK1 Catalytic do 100.0 9.1E-34 2E-38 309.9 23.8 219 677-922 1-225 (280)
92 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.6E-34 1.7E-38 311.9 22.7 214 668-912 4-218 (288)
93 cd07848 STKc_CDKL5 Catalytic d 100.0 8.1E-34 1.8E-38 311.1 22.5 215 669-912 1-215 (287)
94 KOG0658 Glycogen synthase kina 100.0 4.1E-35 8.8E-40 309.7 11.5 207 670-912 25-240 (364)
95 cd05586 STKc_Sck1_like Catalyt 100.0 3.1E-34 6.7E-39 321.4 18.8 215 677-920 1-219 (330)
96 KOG0586 Serine/threonine prote 100.0 1.9E-34 4.2E-39 321.8 16.1 234 664-928 51-285 (596)
97 PTZ00267 NIMA-related protein 100.0 2.3E-33 4.9E-38 329.6 25.7 225 668-920 66-294 (478)
98 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.1E-33 2.4E-38 317.9 22.1 231 664-921 2-302 (338)
99 cd05580 STKc_PKA Catalytic dom 100.0 3.4E-33 7.5E-38 306.9 24.6 223 669-923 1-223 (290)
100 cd05574 STKc_phototropin_like 100.0 6.9E-33 1.5E-37 308.3 27.2 254 669-922 1-256 (316)
101 PHA03212 serine/threonine kina 100.0 3.2E-33 6.8E-38 319.8 24.6 197 666-900 89-285 (391)
102 PTZ00283 serine/threonine prot 100.0 3.2E-33 6.9E-38 328.7 25.0 231 666-922 29-270 (496)
103 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-33 5.6E-38 309.9 22.8 212 668-910 4-217 (303)
104 cd06649 PKc_MEK2 Catalytic dom 100.0 6.8E-33 1.5E-37 310.7 26.4 211 666-909 2-213 (331)
105 KOG4236 Serine/threonine prote 100.0 1.6E-34 3.5E-39 312.4 12.2 228 671-930 564-798 (888)
106 KOG0596 Dual specificity; seri 100.0 6E-34 1.3E-38 311.8 16.7 229 665-923 357-600 (677)
107 KOG0193 Serine/threonine prote 100.0 3.3E-34 7.2E-39 317.7 13.9 222 662-914 385-609 (678)
108 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.9E-33 8.6E-38 313.1 22.7 211 670-908 1-218 (338)
109 cd07862 STKc_CDK6 Catalytic do 100.0 4.8E-33 1E-37 305.4 22.8 215 669-913 1-224 (290)
110 cd05632 STKc_GRK5 Catalytic do 100.0 7.6E-33 1.6E-37 303.5 24.3 225 670-922 1-229 (285)
111 cd05607 STKc_GRK7 Catalytic do 100.0 6.5E-33 1.4E-37 302.7 23.6 214 677-918 1-218 (277)
112 KOG0577 Serine/threonine prote 100.0 4.1E-34 9E-39 313.1 12.1 216 670-918 27-246 (948)
113 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-32 2.7E-37 298.6 23.4 231 666-925 2-237 (266)
114 KOG1989 ARK protein kinase fam 100.0 1E-33 2.2E-38 329.2 15.6 239 665-928 33-284 (738)
115 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-32 2.7E-37 301.8 23.0 205 670-902 1-205 (285)
116 PRK13184 pknD serine/threonine 100.0 1.8E-32 3.8E-37 330.8 25.9 228 669-905 2-238 (932)
117 KOG0579 Ste20-like serine/thre 100.0 3.4E-34 7.3E-39 315.0 9.8 229 668-927 31-267 (1187)
118 PHA02988 hypothetical protein; 100.0 2.4E-32 5.2E-37 299.3 24.3 214 675-922 26-248 (283)
119 cd06650 PKc_MEK1 Catalytic dom 100.0 2.4E-32 5.2E-37 306.4 24.7 209 666-907 2-211 (333)
120 cd07876 STKc_JNK2 Catalytic do 100.0 1.6E-32 3.4E-37 311.2 23.0 210 667-910 19-234 (359)
121 cd05048 PTKc_Ror Catalytic Dom 100.0 2.7E-32 5.8E-37 298.3 23.8 230 667-923 3-253 (283)
122 cd08219 STKc_Nek3 Catalytic do 100.0 3.2E-32 6.9E-37 292.9 23.9 222 670-920 1-223 (255)
123 KOG4250 TANK binding protein k 100.0 2E-33 4.3E-38 317.3 15.1 214 670-913 14-243 (732)
124 cd05052 PTKc_Abl Catalytic dom 100.0 3.2E-32 7E-37 294.6 24.0 227 666-922 3-231 (263)
125 cd05096 PTKc_DDR1 Catalytic do 100.0 2.9E-32 6.4E-37 301.6 24.0 217 667-910 3-254 (304)
126 KOG2345 Serine/threonine prote 100.0 4.7E-34 1E-38 285.3 8.6 245 665-930 17-275 (302)
127 KOG0604 MAP kinase-activated p 100.0 1.3E-33 2.8E-38 288.4 11.8 217 668-920 60-289 (400)
128 KOG0574 STE20-like serine/thre 100.0 9.9E-35 2.1E-39 295.5 3.7 208 670-910 34-241 (502)
129 PTZ00036 glycogen synthase kin 100.0 2E-32 4.4E-37 318.0 23.6 210 667-912 64-285 (440)
130 cd07853 STKc_NLK Catalytic dom 100.0 2.1E-32 4.6E-37 311.7 22.9 213 670-912 1-219 (372)
131 cd07875 STKc_JNK1 Catalytic do 100.0 2.7E-32 6E-37 309.9 23.2 212 667-912 22-239 (364)
132 cd05106 PTKc_CSF-1R Catalytic 100.0 1.9E-32 4.1E-37 312.0 21.9 223 665-914 34-331 (374)
133 PLN00034 mitogen-activated pro 100.0 2.2E-32 4.7E-37 309.4 21.7 201 665-900 70-275 (353)
134 cd05609 STKc_MAST Catalytic do 100.0 9.3E-32 2E-36 297.8 26.3 239 669-921 1-239 (305)
135 cd08529 STKc_FA2-like Catalyti 100.0 1E-31 2.2E-36 288.7 25.8 218 670-915 1-218 (256)
136 cd07863 STKc_CDK4 Catalytic do 100.0 2.7E-32 5.8E-37 299.1 21.6 213 670-912 1-221 (288)
137 KOG4721 Serine/threonine prote 100.0 1E-33 2.3E-38 308.9 10.2 218 664-923 119-338 (904)
138 cd07874 STKc_JNK3 Catalytic do 100.0 3.5E-32 7.6E-37 307.9 22.6 211 667-911 15-231 (355)
139 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.3E-32 1.1E-36 300.4 23.2 215 667-912 4-219 (309)
140 PTZ00284 protein kinase; Provi 100.0 4.5E-32 9.8E-37 318.2 23.6 215 667-918 127-365 (467)
141 PTZ00266 NIMA-related protein 100.0 5.9E-32 1.3E-36 327.4 24.9 224 666-918 10-263 (1021)
142 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.7E-32 5.9E-37 307.3 20.6 210 668-912 14-230 (343)
143 cd05104 PTKc_Kit Catalytic dom 100.0 6.2E-32 1.3E-36 308.0 23.1 221 665-912 31-331 (375)
144 cd05072 PTKc_Lyn Catalytic dom 100.0 9.8E-32 2.1E-36 290.2 23.3 218 665-913 2-220 (261)
145 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-31 2.8E-36 294.0 24.7 227 666-920 2-246 (288)
146 cd08223 STKc_Nek4 Catalytic do 100.0 1.8E-31 3.8E-36 287.2 25.0 218 670-915 1-219 (257)
147 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-31 4.5E-36 287.7 25.3 228 669-922 2-233 (263)
148 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-31 2.5E-36 292.6 23.1 225 667-918 3-245 (280)
149 KOG1026 Nerve growth factor re 100.0 1.2E-32 2.6E-37 318.6 15.6 239 665-930 482-739 (774)
150 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-31 3.6E-36 291.3 23.7 230 666-922 3-247 (277)
151 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-31 2.8E-36 290.3 22.4 217 667-915 7-226 (267)
152 KOG0194 Protein tyrosine kinas 100.0 2.1E-32 4.6E-37 307.8 16.7 234 662-924 150-391 (474)
153 cd05088 PTKc_Tie2 Catalytic do 100.0 1.4E-31 2.9E-36 296.3 22.8 218 666-913 4-239 (303)
154 cd05068 PTKc_Frk_like Catalyti 100.0 2E-31 4.3E-36 287.9 23.5 217 666-913 3-220 (261)
155 KOG0983 Mitogen-activated prot 100.0 1.6E-32 3.4E-37 277.0 13.7 232 667-930 90-328 (391)
156 cd08221 STKc_Nek9 Catalytic do 100.0 3.9E-31 8.5E-36 284.5 25.5 219 670-916 1-219 (256)
157 cd05090 PTKc_Ror1 Catalytic do 100.0 2E-31 4.3E-36 291.7 23.5 230 666-922 2-252 (283)
158 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-31 4.6E-36 305.0 24.8 223 664-913 32-356 (400)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-31 3.4E-36 292.4 22.5 232 666-924 2-254 (283)
160 cd05059 PTKc_Tec_like Catalyti 100.0 2E-31 4.3E-36 287.2 22.8 223 668-922 3-227 (256)
161 cd06611 STKc_SLK_like Catalyti 100.0 2.2E-31 4.7E-36 290.7 23.3 216 668-914 4-224 (280)
162 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.5E-31 5.5E-36 286.3 23.4 216 667-914 2-218 (256)
163 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-31 3.4E-36 288.4 21.8 215 668-913 5-220 (261)
164 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-31 4.6E-36 290.1 22.9 231 665-922 2-247 (277)
165 cd05108 PTKc_EGFR Catalytic do 100.0 2.2E-31 4.7E-36 296.4 23.5 218 666-912 4-226 (316)
166 PHA03207 serine/threonine kina 100.0 1.9E-31 4.2E-36 305.9 23.6 201 666-902 89-291 (392)
167 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.4E-31 5.3E-36 287.1 23.0 227 665-923 2-230 (260)
168 cd05071 PTKc_Src Catalytic dom 100.0 2.5E-31 5.5E-36 287.6 23.1 216 666-913 3-219 (262)
169 cd06652 STKc_MEKK2 Catalytic d 100.0 5.8E-31 1.3E-35 285.0 25.0 217 669-911 2-222 (265)
170 cd05061 PTKc_InsR Catalytic do 100.0 5E-31 1.1E-35 289.4 24.7 231 665-922 2-247 (288)
171 cd05578 STKc_Yank1 Catalytic d 100.0 1.6E-31 3.4E-36 288.1 20.3 224 670-923 1-227 (258)
172 cd08228 STKc_Nek6 Catalytic do 100.0 4.8E-31 1E-35 285.7 24.2 217 669-912 2-222 (267)
173 cd06644 STKc_STK10_LOK Catalyt 100.0 5.7E-31 1.2E-35 289.5 25.1 216 667-913 10-230 (292)
174 KOG0662 Cyclin-dependent kinas 100.0 4.3E-32 9.3E-37 258.0 13.7 214 669-912 2-217 (292)
175 cd05034 PTKc_Src_like Catalyti 100.0 4.8E-31 1E-35 284.7 23.8 227 665-922 2-230 (261)
176 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.4E-31 7.3E-36 292.7 22.9 214 667-911 4-218 (301)
177 cd06646 STKc_MAP4K5 Catalytic 100.0 3.2E-31 6.9E-36 287.2 22.2 217 667-915 7-226 (267)
178 cd06643 STKc_SLK Catalytic dom 100.0 6.1E-31 1.3E-35 287.6 24.6 213 670-913 6-223 (282)
179 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.3E-31 1.6E-35 284.3 24.9 230 670-922 1-237 (267)
180 cd06609 STKc_MST3_like Catalyt 100.0 6.6E-31 1.4E-35 286.0 24.6 215 669-915 1-215 (274)
181 cd05082 PTKc_Csk Catalytic dom 100.0 4.4E-31 9.6E-36 284.4 23.0 212 665-913 2-215 (256)
182 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.8E-31 8.3E-36 285.5 22.5 217 665-913 2-219 (260)
183 cd05054 PTKc_VEGFR Catalytic d 100.0 3.4E-31 7.3E-36 297.6 23.0 221 664-911 2-289 (337)
184 PF00069 Pkinase: Protein kina 100.0 2.7E-31 6E-36 285.9 21.2 212 671-912 1-216 (260)
185 cd06619 PKc_MKK5 Catalytic dom 100.0 6.2E-31 1.3E-35 287.3 24.2 195 669-900 1-195 (279)
186 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.6E-31 1E-35 292.5 23.5 232 665-923 14-269 (307)
187 cd08229 STKc_Nek7 Catalytic do 100.0 5.7E-31 1.2E-35 285.1 23.4 217 669-912 2-222 (267)
188 KOG1187 Serine/threonine prote 100.0 1.2E-31 2.6E-36 300.3 18.6 202 668-900 74-280 (361)
189 cd08227 PK_STRAD_alpha Pseudok 100.0 6.3E-31 1.4E-35 294.2 24.4 221 673-914 2-226 (327)
190 cd05572 STKc_cGK_PKG Catalytic 100.0 7.4E-31 1.6E-35 283.5 24.1 217 677-923 1-221 (262)
191 cd05092 PTKc_TrkA Catalytic do 100.0 6E-31 1.3E-35 287.6 23.5 229 667-923 3-251 (280)
192 cd05053 PTKc_FGFR Catalytic do 100.0 4.6E-31 9.9E-36 290.2 22.6 232 662-920 5-258 (293)
193 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.7E-31 1E-35 284.5 22.2 217 667-915 2-219 (256)
194 cd06637 STKc_TNIK Catalytic do 100.0 8.2E-31 1.8E-35 284.7 24.1 214 668-912 5-230 (272)
195 cd06615 PKc_MEK Catalytic doma 100.0 9.8E-31 2.1E-35 290.1 25.0 206 669-907 1-207 (308)
196 KOG0584 Serine/threonine prote 100.0 3.4E-32 7.3E-37 304.0 13.3 211 673-915 44-261 (632)
197 cd05033 PTKc_EphR Catalytic do 100.0 9.7E-31 2.1E-35 283.4 24.4 219 667-913 2-224 (266)
198 cd05094 PTKc_TrkC Catalytic do 100.0 6.4E-31 1.4E-35 289.0 23.3 221 667-915 3-243 (291)
199 cd05577 STKc_GRK Catalytic dom 100.0 5.8E-31 1.3E-35 287.1 22.7 199 677-903 1-199 (277)
200 cd05055 PTKc_PDGFR Catalytic d 100.0 9.2E-31 2E-35 289.5 24.4 223 665-914 31-260 (302)
201 cd08218 STKc_Nek1 Catalytic do 100.0 8.8E-31 1.9E-35 281.8 23.6 223 670-920 1-224 (256)
202 KOG4645 MAPKKK (MAP kinase kin 100.0 3.9E-33 8.5E-38 330.5 5.7 236 667-930 1233-1473(1509)
203 cd05066 PTKc_EphR_A Catalytic 100.0 8.3E-31 1.8E-35 284.2 23.4 220 667-913 2-225 (267)
204 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.4E-31 2E-35 291.1 24.1 232 664-922 7-262 (314)
205 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-30 3E-35 281.0 24.7 216 669-915 3-221 (262)
206 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-30 2.8E-35 280.0 24.3 218 675-920 1-220 (252)
207 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.4E-31 2E-35 285.5 23.6 230 667-923 4-248 (277)
208 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-30 2.5E-35 287.8 24.6 210 668-910 19-228 (296)
209 cd05069 PTKc_Yes Catalytic dom 100.0 8.8E-31 1.9E-35 282.9 23.1 216 666-913 3-219 (260)
210 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-30 2.3E-35 288.2 24.0 224 669-922 2-244 (297)
211 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.9E-30 4.1E-35 280.9 25.6 218 669-912 2-223 (264)
212 cd07861 STKc_CDK1_euk Catalyti 100.0 8.4E-31 1.8E-35 286.6 23.0 212 670-910 1-214 (285)
213 KOG4279 Serine/threonine prote 100.0 2.7E-32 5.8E-37 303.1 11.1 196 676-902 582-782 (1226)
214 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.7E-30 3.8E-35 281.0 25.0 219 669-914 2-224 (267)
215 cd05116 PTKc_Syk Catalytic dom 100.0 1.4E-30 3.1E-35 280.7 24.2 223 676-926 2-228 (257)
216 PHA03211 serine/threonine kina 100.0 9.7E-31 2.1E-35 303.3 24.5 196 667-898 167-362 (461)
217 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-30 2.9E-35 282.8 24.1 226 671-922 1-241 (273)
218 cd05101 PTKc_FGFR2 Catalytic d 100.0 1E-30 2.3E-35 289.2 23.6 230 665-921 11-264 (304)
219 cd07868 STKc_CDK8 Catalytic do 100.0 4.7E-31 1E-35 293.7 20.9 198 674-901 6-219 (317)
220 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-30 2.9E-35 284.4 24.2 219 666-913 4-227 (279)
221 cd05075 PTKc_Axl Catalytic dom 100.0 1.7E-30 3.6E-35 282.3 24.3 225 671-921 1-239 (272)
222 cd05606 STKc_beta_ARK Catalyti 100.0 1.3E-30 2.8E-35 284.8 23.5 215 676-921 1-222 (278)
223 cd08220 STKc_Nek8 Catalytic do 100.0 1.9E-30 4E-35 278.9 24.2 225 670-923 1-227 (256)
224 cd05039 PTKc_Csk_like Catalyti 100.0 2E-30 4.3E-35 279.2 24.3 212 666-913 3-215 (256)
225 KOG0984 Mitogen-activated prot 100.0 1.9E-31 4.2E-36 259.4 14.6 229 662-921 39-277 (282)
226 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-30 4.7E-35 279.6 24.3 214 675-921 2-216 (260)
227 cd05051 PTKc_DDR Catalytic dom 100.0 1.9E-30 4.1E-35 285.6 24.4 219 667-912 3-248 (296)
228 cd05633 STKc_GRK3 Catalytic do 100.0 2.2E-30 4.8E-35 283.1 24.3 195 676-901 1-199 (279)
229 KOG1095 Protein tyrosine kinas 100.0 4.5E-31 9.7E-36 316.1 20.2 238 666-930 689-938 (1025)
230 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-30 5.1E-35 279.5 23.8 217 665-913 2-219 (260)
231 cd07847 STKc_CDKL1_4 Catalytic 100.0 2E-30 4.4E-35 283.6 23.5 213 669-911 1-214 (286)
232 PRK13560 hypothetical protein; 100.0 7.1E-30 1.5E-34 320.2 31.7 418 129-596 154-598 (807)
233 cd06655 STKc_PAK2 Catalytic do 100.0 2.2E-30 4.9E-35 285.6 23.9 211 669-912 19-229 (296)
234 cd05579 STKc_MAST_like Catalyt 100.0 1.8E-30 3.9E-35 280.0 22.6 224 677-921 1-224 (265)
235 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-30 3.5E-35 286.9 22.7 204 669-905 19-222 (297)
236 cd00192 PTKc Catalytic domain 100.0 3.1E-30 6.8E-35 277.4 24.4 221 675-922 1-233 (262)
237 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.7E-30 5.8E-35 280.2 24.0 220 667-913 3-226 (268)
238 cd05057 PTKc_EGFR_like Catalyt 100.0 2.8E-30 6E-35 282.0 24.2 226 666-920 4-235 (279)
239 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-30 5.4E-35 280.7 23.6 221 668-913 3-227 (269)
240 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-30 6.2E-35 313.9 26.7 151 668-820 3-153 (669)
241 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-30 7.3E-35 278.9 24.4 220 670-913 1-223 (265)
242 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.1E-30 4.5E-35 283.8 23.0 205 666-903 2-207 (284)
243 cd05040 PTKc_Ack_like Catalyti 100.0 4.2E-30 9E-35 276.7 24.8 211 675-912 1-215 (257)
244 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-30 6.1E-35 282.2 23.8 220 666-914 4-228 (279)
245 cd05107 PTKc_PDGFR_beta Cataly 100.0 3E-30 6.6E-35 295.4 25.0 230 664-920 32-366 (401)
246 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-30 5.5E-35 283.7 23.4 229 667-922 3-258 (288)
247 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.3E-30 5.1E-35 290.5 23.6 233 663-922 6-262 (334)
248 cd06651 STKc_MEKK3 Catalytic d 100.0 4.1E-30 9E-35 278.6 24.8 217 669-911 2-222 (266)
249 cd05046 PTK_CCK4 Pseudokinase 100.0 2.7E-30 5.9E-35 281.2 23.4 227 667-921 3-242 (275)
250 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.7E-30 3.8E-35 284.5 21.9 210 669-909 1-218 (286)
251 cd05581 STKc_PDK1 Catalytic do 100.0 2.1E-30 4.7E-35 282.2 22.3 246 669-923 1-247 (280)
252 cd05115 PTKc_Zap-70 Catalytic 100.0 4.3E-30 9.4E-35 277.2 24.4 222 676-925 2-227 (257)
253 cd06640 STKc_MST4 Catalytic do 100.0 3.8E-30 8.2E-35 280.7 24.1 212 669-912 4-215 (277)
254 cd07839 STKc_CDK5 Catalytic do 100.0 1E-30 2.2E-35 285.9 19.6 212 670-911 1-214 (284)
255 cd07832 STKc_CCRK Catalytic do 100.0 3E-30 6.4E-35 282.3 23.1 214 670-912 1-215 (286)
256 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.3E-30 7.1E-35 281.8 23.4 214 668-912 15-240 (282)
257 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.7E-30 8E-35 278.3 23.5 221 669-914 1-223 (267)
258 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.3E-30 7.3E-35 290.3 23.6 221 666-913 4-298 (343)
259 cd05045 PTKc_RET Catalytic dom 100.0 6.4E-30 1.4E-34 280.9 25.0 217 670-913 1-245 (290)
260 cd05083 PTKc_Chk Catalytic dom 100.0 3.5E-30 7.6E-35 277.1 22.4 210 666-913 3-213 (254)
261 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-30 6.4E-35 283.4 22.2 212 668-910 4-217 (291)
262 cd05060 PTKc_Syk_like Catalyti 100.0 7E-30 1.5E-34 275.2 24.5 218 675-921 1-223 (257)
263 cd05042 PTKc_Aatyk Catalytic d 100.0 5.8E-30 1.3E-34 277.8 24.0 212 675-913 1-225 (269)
264 KOG1151 Tousled-like protein k 100.0 1.7E-31 3.7E-36 283.9 11.2 243 666-930 460-720 (775)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.5E-30 5.4E-35 282.0 20.9 212 669-912 4-215 (277)
266 cd06658 STKc_PAK5 Catalytic do 100.0 3.2E-30 7E-35 283.8 21.9 211 669-912 22-232 (292)
267 cd06659 STKc_PAK6 Catalytic do 100.0 3.7E-30 8.1E-35 284.0 22.4 212 669-913 21-232 (297)
268 cd06630 STKc_MEKK1 Catalytic d 100.0 3.3E-30 7.2E-35 279.1 21.5 208 670-902 1-212 (268)
269 cd08217 STKc_Nek2 Catalytic do 100.0 6.3E-30 1.4E-34 275.7 23.6 223 670-920 1-233 (265)
270 cd05047 PTKc_Tie Catalytic dom 100.0 6.5E-30 1.4E-34 277.8 23.8 215 676-920 2-235 (270)
271 cd05097 PTKc_DDR_like Catalyti 100.0 3.3E-30 7.3E-35 283.9 21.6 218 667-911 3-246 (295)
272 cd06612 STKc_MST1_2 Catalytic 100.0 8.1E-30 1.7E-34 274.0 24.1 209 669-910 3-211 (256)
273 cd07841 STKc_CDK7 Catalytic do 100.0 4E-30 8.8E-35 283.4 22.2 214 670-912 1-217 (298)
274 cd07850 STKc_JNK Catalytic dom 100.0 4.2E-30 9.1E-35 290.7 22.8 211 668-912 15-231 (353)
275 cd05095 PTKc_DDR2 Catalytic do 100.0 6.9E-30 1.5E-34 281.5 23.6 216 668-910 4-246 (296)
276 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-30 6.1E-35 282.6 20.3 213 669-911 1-214 (286)
277 PHA03209 serine/threonine kina 100.0 1.7E-30 3.8E-35 294.2 19.1 195 667-900 64-259 (357)
278 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-29 2.8E-34 271.7 24.9 217 675-921 1-219 (250)
279 KOG0671 LAMMER dual specificit 100.0 1.2E-31 2.6E-36 283.5 8.8 219 668-921 88-332 (415)
280 KOG1035 eIF-2alpha kinase GCN2 100.0 4.9E-31 1.1E-35 311.6 14.9 239 667-920 477-838 (1351)
281 cd05112 PTKc_Itk Catalytic dom 100.0 8.5E-30 1.9E-34 274.1 23.4 214 668-913 3-217 (256)
282 cd05056 PTKc_FAK Catalytic dom 100.0 8.7E-30 1.9E-34 276.6 23.6 228 667-924 4-236 (270)
283 PHA02882 putative serine/threo 100.0 7.3E-30 1.6E-34 281.2 23.2 232 666-920 9-264 (294)
284 PLN00009 cyclin-dependent kina 100.0 9.4E-30 2E-34 280.0 24.0 214 669-911 2-217 (294)
285 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-29 2.8E-34 272.6 24.4 213 670-912 1-216 (258)
286 cd06608 STKc_myosinIII_like Ca 100.0 9E-30 2E-34 276.3 23.2 215 668-913 5-233 (275)
287 smart00219 TyrKc Tyrosine kina 100.0 1.1E-29 2.4E-34 272.9 23.4 217 671-915 1-222 (258)
288 cd08225 STKc_Nek5 Catalytic do 100.0 9.3E-30 2E-34 273.7 22.8 218 670-915 1-219 (257)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 2.1E-29 4.4E-34 272.1 25.5 226 670-921 1-231 (264)
290 PF07714 Pkinase_Tyr: Protein 100.0 4E-30 8.8E-35 277.9 20.0 226 672-924 2-233 (259)
291 cd07860 STKc_CDK2_3 Catalytic 100.0 4.9E-30 1.1E-34 280.5 20.8 213 670-911 1-214 (284)
292 cd05123 STKc_AGC Catalytic dom 100.0 1.4E-29 3E-34 271.2 23.8 219 677-924 1-219 (250)
293 PHA03210 serine/threonine kina 100.0 2E-30 4.4E-35 305.8 19.0 204 668-898 147-368 (501)
294 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-29 5.2E-34 280.2 26.4 214 669-915 25-241 (317)
295 cd07867 STKc_CDC2L6 Catalytic 100.0 4.8E-30 1E-34 285.4 20.7 197 675-901 7-219 (317)
296 cd07843 STKc_CDC2L1 Catalytic 100.0 7.4E-30 1.6E-34 280.7 21.9 215 668-912 4-221 (293)
297 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-29 2.5E-34 278.7 23.3 223 670-920 1-234 (290)
298 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-29 3.2E-34 276.0 23.8 212 670-913 5-216 (277)
299 cd07836 STKc_Pho85 Catalytic d 100.0 1E-29 2.3E-34 277.8 22.6 213 670-912 1-215 (284)
300 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-29 4.9E-34 276.0 25.2 212 670-914 20-231 (285)
301 cd07833 STKc_CDKL Catalytic do 100.0 7.6E-30 1.6E-34 279.4 21.4 214 669-911 1-215 (288)
302 cd06607 STKc_TAO Catalytic dom 100.0 2.1E-29 4.5E-34 279.3 24.9 212 669-913 15-229 (307)
303 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-29 2.7E-34 278.6 22.8 204 668-902 4-208 (291)
304 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-29 3.4E-34 279.7 23.7 219 666-913 4-227 (303)
305 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-29 3E-34 277.2 23.0 214 667-911 16-242 (286)
306 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-29 2.4E-34 274.6 21.8 213 669-913 1-219 (265)
307 cd07845 STKc_CDK10 Catalytic d 100.0 1.2E-29 2.7E-34 281.3 22.5 216 667-912 5-223 (309)
308 cd06917 STKc_NAK1_like Catalyt 100.0 1.8E-29 3.8E-34 275.1 23.3 210 670-911 2-215 (277)
309 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-29 3.4E-34 278.1 23.0 215 669-912 1-226 (295)
310 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.5E-29 5.5E-34 273.1 24.2 215 670-911 2-225 (272)
311 cd08215 STKc_Nek Catalytic dom 100.0 2.7E-29 5.9E-34 269.4 24.2 222 670-919 1-225 (258)
312 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-29 5.3E-34 275.1 24.2 203 669-900 3-212 (283)
313 cd06623 PKc_MAPKK_plant_like C 100.0 3.2E-29 7E-34 270.4 24.7 214 669-913 1-218 (264)
314 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-29 4.7E-34 275.0 23.5 221 666-913 3-235 (280)
315 cd07865 STKc_CDK9 Catalytic do 100.0 1.7E-29 3.6E-34 279.7 22.9 219 668-912 11-238 (310)
316 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.2E-29 4.7E-34 273.4 23.4 210 675-911 1-223 (269)
317 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.1E-29 4.6E-34 275.2 23.4 214 669-913 1-223 (283)
318 KOG1006 Mitogen-activated prot 100.0 9.5E-32 2.1E-36 270.6 4.2 220 665-915 60-287 (361)
319 cd06639 STKc_myosinIIIB Cataly 100.0 2.7E-29 5.9E-34 275.9 24.0 215 668-913 21-248 (291)
320 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-29 2.6E-34 279.3 21.1 210 668-910 18-227 (293)
321 cd05041 PTKc_Fes_like Catalyti 100.0 2.9E-29 6.4E-34 269.1 23.5 218 675-921 1-220 (251)
322 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.7E-29 1E-33 273.6 25.5 213 669-912 1-222 (287)
323 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-29 2.6E-34 281.8 21.1 209 670-903 1-221 (316)
324 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.8E-30 1.7E-34 275.2 18.9 210 675-920 1-227 (258)
325 cd06633 STKc_TAO3 Catalytic do 100.0 7E-29 1.5E-33 275.9 27.1 211 670-913 22-235 (313)
326 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-29 2.8E-34 274.8 20.7 221 675-922 1-239 (269)
327 PHA03390 pk1 serine/threonine- 100.0 2E-29 4.4E-34 273.7 22.0 194 669-903 14-211 (267)
328 cd07849 STKc_ERK1_2_like Catal 100.0 1.4E-29 3.1E-34 284.3 21.3 213 668-910 4-222 (336)
329 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-29 6E-34 281.1 23.5 221 675-916 4-228 (328)
330 cd06614 STKc_PAK Catalytic dom 100.0 4.3E-29 9.3E-34 273.6 24.4 215 668-914 18-232 (286)
331 cd08530 STKc_CNK2-like Catalyt 100.0 3.2E-29 6.9E-34 269.2 22.9 216 670-915 1-218 (256)
332 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.8E-29 1E-33 272.8 24.7 205 668-900 3-213 (284)
333 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.6E-29 5.7E-34 283.3 23.1 211 667-912 15-232 (345)
334 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-29 5.2E-34 274.9 22.1 213 671-912 1-214 (283)
335 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.1E-29 6.7E-34 282.5 23.4 211 668-913 14-231 (343)
336 KOG4278 Protein tyrosine kinas 100.0 3.9E-30 8.5E-35 282.7 14.9 240 662-931 260-501 (1157)
337 cd05058 PTKc_Met_Ron Catalytic 100.0 7.1E-29 1.5E-33 267.9 24.6 214 675-914 1-219 (262)
338 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.4E-29 9.6E-34 273.3 23.0 203 669-898 4-212 (284)
339 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-28 2.2E-33 264.8 25.3 222 670-921 1-223 (254)
340 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-29 3.3E-34 283.9 19.3 216 669-911 5-225 (334)
341 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.4E-29 1.2E-33 270.6 22.9 223 671-919 1-238 (273)
342 cd08528 STKc_Nek10 Catalytic d 100.0 8.3E-29 1.8E-33 268.6 23.9 219 670-916 1-231 (269)
343 KOG0666 Cyclin C-dependent kin 100.0 1.4E-30 3E-35 267.2 9.3 208 668-901 23-243 (438)
344 cd07831 STKc_MOK Catalytic dom 100.0 7.3E-29 1.6E-33 270.7 23.4 208 671-911 1-212 (282)
345 cd06634 STKc_TAO2 Catalytic do 100.0 8.9E-29 1.9E-33 274.5 24.4 213 669-914 15-230 (308)
346 KOG0199 ACK and related non-re 100.0 7.9E-30 1.7E-34 284.6 15.2 237 666-929 107-348 (1039)
347 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-28 2.3E-33 268.1 23.8 212 675-913 1-224 (268)
348 cd06657 STKc_PAK4 Catalytic do 100.0 1.1E-28 2.4E-33 271.6 24.3 209 671-912 22-230 (292)
349 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.9E-29 1.7E-33 268.2 22.7 197 675-906 1-218 (262)
350 cd07838 STKc_CDK4_6_like Catal 100.0 7.8E-29 1.7E-33 271.0 22.9 212 671-912 1-220 (287)
351 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.8E-29 1.5E-33 270.6 22.3 196 676-906 2-230 (274)
352 cd07840 STKc_CDK9_like Catalyt 100.0 6.3E-29 1.4E-33 271.6 21.9 213 671-912 1-216 (287)
353 cd05122 PKc_STE Catalytic doma 100.0 2E-28 4.4E-33 261.4 25.2 211 670-912 1-211 (253)
354 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.1E-29 8.8E-34 280.8 20.7 212 668-910 4-221 (337)
355 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-28 2.7E-33 267.1 23.8 201 670-901 9-214 (268)
356 KOG4257 Focal adhesion tyrosin 100.0 1.4E-29 3E-34 279.3 16.2 234 666-929 386-625 (974)
357 cd06616 PKc_MKK4 Catalytic dom 100.0 4.9E-29 1.1E-33 273.3 20.6 204 668-902 3-214 (288)
358 KOG0196 Tyrosine kinase, EPH ( 100.0 2.7E-30 5.8E-35 292.4 10.8 238 664-930 624-868 (996)
359 KOG1152 Signal transduction se 100.0 3.6E-30 7.9E-35 282.7 11.2 203 667-900 559-771 (772)
360 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9E-29 2E-33 276.9 22.3 206 667-907 8-215 (328)
361 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-28 2.6E-33 270.4 22.6 226 670-923 1-237 (288)
362 cd06606 STKc_MAPKKK Catalytic 100.0 2.1E-28 4.5E-33 262.5 24.1 214 670-911 1-217 (260)
363 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-28 2.8E-33 265.1 22.2 195 675-906 1-215 (259)
364 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-28 2.8E-33 276.1 23.1 216 670-912 1-224 (332)
365 cd08216 PK_STRAD Pseudokinase 100.0 1.7E-28 3.6E-33 272.7 23.8 206 681-907 12-219 (314)
366 KOG1094 Discoidin domain recep 100.0 1.6E-29 3.5E-34 277.7 15.1 237 665-929 534-780 (807)
367 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-28 3.2E-33 268.5 22.7 207 668-901 3-215 (284)
368 cd07866 STKc_BUR1 Catalytic do 100.0 9.7E-29 2.1E-33 273.8 21.3 226 668-912 7-241 (311)
369 cd07834 STKc_MAPK Catalytic do 100.0 5.6E-29 1.2E-33 278.6 19.3 216 670-913 1-222 (330)
370 cd07852 STKc_MAPK15 Catalytic 100.0 9.8E-29 2.1E-33 277.7 21.3 218 668-912 6-227 (337)
371 cd07864 STKc_CDK12 Catalytic d 100.0 1.4E-28 3E-33 271.6 21.4 217 667-912 5-232 (302)
372 PTZ00024 cyclin-dependent prot 100.0 1.5E-28 3.2E-33 275.9 21.9 228 669-912 8-248 (335)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-28 2.6E-33 277.5 21.0 209 668-912 14-229 (342)
374 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-28 2.9E-33 277.2 21.0 215 668-913 4-234 (342)
375 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-28 3.1E-33 265.4 20.0 217 670-914 1-221 (260)
376 KOG0587 Traf2- and Nck-interac 100.0 7.4E-29 1.6E-33 285.2 18.6 215 667-912 17-242 (953)
377 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-28 2.5E-33 277.8 20.0 211 668-913 14-231 (343)
378 cd05118 STKc_CMGC Catalytic do 100.0 2.1E-28 4.5E-33 267.2 20.5 212 671-912 1-213 (283)
379 cd06618 PKc_MKK7 Catalytic dom 100.0 5.3E-28 1.2E-32 266.5 23.5 220 663-914 9-235 (296)
380 KOG0668 Casein kinase II, alph 100.0 1.9E-29 4E-34 248.8 10.5 206 667-911 36-247 (338)
381 KOG0603 Ribosomal protein S6 k 100.0 4E-29 8.8E-34 280.8 14.5 210 667-916 320-532 (612)
382 cd07829 STKc_CDK_like Catalyti 100.0 2.6E-28 5.7E-33 266.2 20.5 212 671-912 1-213 (282)
383 cd07830 STKc_MAK_like Catalyti 100.0 3E-28 6.4E-33 266.2 20.4 211 671-912 1-213 (283)
384 KOG0669 Cyclin T-dependent kin 100.0 5.3E-30 1.1E-34 255.9 3.1 220 667-912 15-243 (376)
385 cd05576 STKc_RPK118_like Catal 100.0 4.7E-28 1E-32 258.1 17.4 181 680-900 4-184 (237)
386 KOG0664 Nemo-like MAPK-related 100.0 1E-29 2.3E-34 256.0 2.2 213 670-912 54-272 (449)
387 smart00221 STYKc Protein kinas 99.9 1.7E-26 3.7E-31 242.4 23.0 218 671-917 1-221 (225)
388 PRK09776 putative diguanylate 99.9 1.3E-27 2.8E-32 309.6 17.2 381 176-596 270-661 (1092)
389 KOG0670 U4/U6-associated splic 99.9 2E-28 4.4E-33 265.7 7.6 223 666-922 429-659 (752)
390 KOG1290 Serine/threonine prote 99.9 6E-27 1.3E-31 253.8 18.2 141 660-805 69-222 (590)
391 KOG3653 Transforming growth fa 99.9 1.2E-26 2.5E-31 251.2 16.5 220 667-922 208-467 (534)
392 KOG0665 Jun-N-terminal kinase 99.9 3.4E-27 7.4E-32 244.3 8.3 211 667-912 15-231 (369)
393 KOG2052 Activin A type IB rece 99.9 3.1E-26 6.7E-31 246.2 15.7 224 668-925 210-470 (513)
394 KOG1025 Epidermal growth facto 99.9 2E-26 4.4E-31 261.7 14.3 231 670-929 697-933 (1177)
395 smart00220 S_TKc Serine/Threon 99.9 3.6E-25 7.8E-30 234.5 22.5 207 681-919 1-208 (244)
396 PLN03224 probable serine/threo 99.9 3E-25 6.4E-30 257.4 22.6 210 665-900 141-435 (507)
397 PLN03225 Serine/threonine-prot 99.9 1.6E-25 3.5E-30 265.9 18.8 201 666-899 129-380 (566)
398 KOG1345 Serine/threonine kinas 99.9 2.2E-26 4.7E-31 232.6 8.8 216 668-920 23-252 (378)
399 PLN00113 leucine-rich repeat r 99.9 1.5E-25 3.2E-30 286.4 18.7 187 670-900 691-880 (968)
400 TIGR02040 PpsR-CrtJ transcript 99.9 1.4E-25 3.1E-30 261.5 15.9 360 195-593 2-368 (442)
401 KOG1163 Casein kinase (serine/ 99.9 5.7E-26 1.2E-30 226.1 10.4 236 663-925 9-251 (341)
402 KOG0200 Fibroblast/platelet-de 99.9 6.3E-25 1.4E-29 263.4 21.6 238 664-929 291-555 (609)
403 KOG0576 Mitogen-activated prot 99.9 3.8E-26 8.3E-31 255.2 4.2 220 667-918 13-235 (829)
404 KOG1027 Serine/threonine prote 99.9 1.8E-25 3.9E-30 256.3 9.5 212 670-916 510-731 (903)
405 KOG1167 Serine/threonine prote 99.9 2.8E-25 6E-30 238.7 9.4 222 668-899 35-279 (418)
406 PRK13560 hypothetical protein; 99.9 2.9E-24 6.3E-29 269.5 20.2 380 176-594 54-470 (807)
407 KOG1165 Casein kinase (serine/ 99.9 2.2E-24 4.8E-29 223.8 13.9 225 663-914 22-255 (449)
408 KOG1164 Casein kinase (serine/ 99.9 4.5E-23 9.8E-28 229.9 20.7 212 670-903 19-242 (322)
409 cd00180 PKc Catalytic domain o 99.9 1.5E-22 3.2E-27 208.8 22.2 185 677-891 1-187 (215)
410 PRK09188 serine/threonine prot 99.9 9.6E-23 2.1E-27 227.0 16.2 177 664-872 13-194 (365)
411 KOG1024 Receptor-like protein 99.9 2E-22 4.4E-27 212.9 15.3 238 665-929 280-531 (563)
412 PRK11359 cyclic-di-GMP phospho 99.9 1.9E-20 4.2E-25 234.9 23.2 242 186-593 9-255 (799)
413 COG0515 SPS1 Serine/threonine 99.9 7.6E-20 1.7E-24 201.2 25.0 222 671-916 2-233 (384)
414 TIGR02938 nifL_nitrog nitrogen 99.8 3.1E-21 6.7E-26 227.5 13.6 275 188-626 3-290 (494)
415 KOG0603 Ribosomal protein S6 k 99.8 1.7E-22 3.6E-27 227.8 2.2 209 676-924 1-213 (612)
416 PRK10359 lipopolysaccharide co 99.8 5E-21 1.1E-25 198.7 12.4 142 666-820 28-183 (232)
417 PLN00181 protein SPA1-RELATED; 99.8 4.2E-21 9E-26 239.4 10.0 173 726-900 29-217 (793)
418 cd05147 RIO1_euk RIO kinase fa 99.8 2.4E-20 5.1E-25 191.3 13.1 141 674-820 2-166 (190)
419 PRK12274 serine/threonine prot 99.8 4.9E-19 1.1E-23 179.9 16.2 203 671-902 4-211 (218)
420 cd05145 RIO1_like RIO kinase f 99.8 4.3E-19 9.3E-24 182.4 15.7 142 674-821 2-167 (190)
421 KOG0606 Microtubule-associated 99.8 2.2E-19 4.8E-24 211.3 8.5 200 668-921 82-281 (1205)
422 KOG0590 Checkpoint kinase and 99.8 7.5E-20 1.6E-24 216.9 3.5 206 672-903 321-530 (601)
423 smart00750 KIND kinase non-cat 99.8 2.2E-18 4.8E-23 174.5 13.4 119 754-913 1-120 (176)
424 KOG1240 Protein kinase contain 99.8 2.5E-19 5.5E-24 210.6 5.1 204 670-899 24-240 (1431)
425 PRK10345 hypothetical protein; 99.8 8E-18 1.7E-22 174.3 15.3 136 672-818 5-156 (210)
426 KOG1166 Mitotic checkpoint ser 99.7 3.7E-18 8.1E-23 205.8 12.1 199 664-896 693-901 (974)
427 smart00090 RIO RIO-like kinase 99.7 2.9E-17 6.2E-22 174.2 13.3 144 670-820 29-197 (237)
428 PRK14879 serine/threonine prot 99.7 1.2E-16 2.5E-21 167.1 17.4 138 674-820 1-143 (211)
429 PF14531 Kinase-like: Kinase-l 99.7 1.8E-17 3.9E-22 177.3 10.7 200 670-900 13-252 (288)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 4.6E-16 1E-20 161.0 15.7 133 676-820 1-138 (199)
431 cd05144 RIO2_C RIO kinase fami 99.7 8.2E-16 1.8E-20 159.2 13.3 140 670-822 16-176 (198)
432 PF13426 PAS_9: PAS domain; PD 99.6 3.5E-15 7.5E-20 136.2 14.1 104 199-305 1-104 (104)
433 PRK09605 bifunctional UGMP fam 99.6 2.2E-15 4.8E-20 179.5 15.5 140 669-821 333-477 (535)
434 KOG0195 Integrin-linked kinase 99.6 5.8E-16 1.3E-20 157.1 6.8 220 666-922 187-415 (448)
435 PF13426 PAS_9: PAS domain; PD 99.6 6.6E-15 1.4E-19 134.4 12.6 104 482-588 1-104 (104)
436 PRK09776 putative diguanylate 99.6 1.4E-15 3E-20 197.7 10.7 299 129-470 357-663 (1092)
437 cd05119 RIO RIO kinase family, 99.6 5.5E-15 1.2E-19 151.3 12.8 138 674-821 2-164 (187)
438 PRK01723 3-deoxy-D-manno-octul 99.6 2.9E-14 6.2E-19 151.6 15.2 136 676-820 38-191 (239)
439 KOG4158 BRPK/PTEN-induced prot 99.6 9.3E-15 2E-19 155.7 10.9 179 727-930 274-491 (598)
440 KOG1033 eIF-2alpha kinase PEK/ 99.5 2.1E-15 4.5E-20 167.8 4.4 128 742-893 329-457 (516)
441 cd05120 APH_ChoK_like Aminogly 99.5 5.9E-14 1.3E-18 137.2 12.0 132 673-820 2-138 (155)
442 PF08448 PAS_4: PAS fold; Int 99.5 1.5E-13 3.3E-18 126.8 12.4 110 195-308 1-110 (110)
443 PF00989 PAS: PAS fold; Inter 99.5 1.9E-13 4.1E-18 126.8 12.3 112 189-303 1-113 (113)
444 PF08448 PAS_4: PAS fold; Int 99.5 1.5E-13 3.3E-18 126.8 10.5 110 478-591 1-110 (110)
445 KOG0606 Microtubule-associated 99.5 1.2E-14 2.6E-19 172.0 2.2 253 666-921 801-1058(1205)
446 PF00989 PAS: PAS fold; Inter 99.5 4E-13 8.7E-18 124.6 11.4 111 473-586 2-113 (113)
447 KOG0590 Checkpoint kinase and 99.4 1.5E-14 3.2E-19 172.0 -1.8 211 668-903 19-235 (601)
448 PRK13559 hypothetical protein; 99.4 5.2E-12 1.1E-16 143.4 18.8 129 186-314 40-168 (361)
449 PRK13557 histidine kinase; Pro 99.4 2.3E-12 5E-17 154.1 16.6 132 183-314 24-155 (540)
450 PRK11091 aerobic respiration c 99.4 1.4E-12 3.1E-17 163.2 14.7 141 172-315 138-278 (779)
451 TIGR02040 PpsR-CrtJ transcript 99.4 8.1E-13 1.8E-17 154.3 8.9 256 166-465 96-368 (442)
452 PRK11091 aerobic respiration c 99.4 3.2E-12 7E-17 160.1 14.3 137 455-594 137-274 (779)
453 PRK13559 hypothetical protein; 99.4 1.1E-11 2.4E-16 140.8 17.1 122 472-593 43-164 (361)
454 PRK13557 histidine kinase; Pro 99.3 6.2E-12 1.4E-16 150.4 14.5 125 472-596 30-154 (540)
455 TIGR01982 UbiB 2-polyprenylphe 99.3 8.3E-12 1.8E-16 144.2 12.4 142 674-822 122-308 (437)
456 KOG1023 Natriuretic peptide re 99.3 9.2E-12 2E-16 141.8 12.2 164 723-912 1-176 (484)
457 PRK04750 ubiB putative ubiquin 99.3 1.9E-12 4.1E-17 151.0 5.1 146 668-821 119-314 (537)
458 PRK13558 bacterio-opsin activa 99.3 4.3E-11 9.3E-16 147.3 17.1 127 189-315 148-274 (665)
459 cd05146 RIO3_euk RIO kinase fa 99.3 4.9E-11 1.1E-15 121.6 14.4 140 674-821 2-174 (197)
460 cd05151 ChoK Choline Kinase (C 99.2 3.2E-11 7E-16 121.2 10.5 127 674-819 3-135 (170)
461 PRK10060 RNase II stability mo 99.2 7.6E-11 1.6E-15 144.3 15.4 148 173-324 95-249 (663)
462 KOG3087 Serine/threonine prote 99.2 1.6E-10 3.4E-15 112.9 12.6 146 673-820 11-165 (229)
463 PRK11359 cyclic-di-GMP phospho 99.2 1.7E-10 3.8E-15 145.1 16.7 168 131-314 91-259 (799)
464 COG3642 Mn2+-dependent serine/ 99.2 4.6E-10 1E-14 110.4 14.0 134 675-820 2-140 (204)
465 KOG0601 Cyclin-dependent kinas 99.1 2.8E-11 6E-16 137.9 5.5 209 666-900 111-329 (524)
466 TIGR00229 sensory_box PAS doma 99.1 5.8E-10 1.3E-14 100.3 13.0 121 188-312 2-123 (124)
467 PRK13558 bacterio-opsin activa 99.1 6E-10 1.3E-14 137.1 16.7 122 474-595 150-271 (665)
468 KOG1243 Protein kinase [Genera 99.1 4.7E-10 1E-14 128.8 14.1 168 688-894 31-199 (690)
469 PRK10060 RNase II stability mo 99.1 6.2E-10 1.3E-14 136.3 15.8 117 474-594 113-231 (663)
470 TIGR02938 nifL_nitrog nitrogen 99.1 2.6E-10 5.5E-15 134.6 10.7 117 474-593 6-122 (494)
471 PF08447 PAS_3: PAS fold; Int 99.0 1.5E-09 3.2E-14 96.9 9.8 86 214-300 1-91 (91)
472 KOG0601 Cyclin-dependent kinas 99.0 1.7E-10 3.7E-15 131.5 4.4 200 664-896 260-464 (524)
473 TIGR00229 sensory_box PAS doma 99.0 2.8E-09 6E-14 95.8 11.6 115 474-592 5-120 (124)
474 PF08447 PAS_3: PAS fold; Int 99.0 1.4E-09 3E-14 97.1 9.2 86 497-583 1-91 (91)
475 cd05154 ACAD10_11_like Acyl-Co 99.0 2.6E-09 5.7E-14 112.1 10.8 140 675-820 4-206 (223)
476 PRK15123 lipopolysaccharide co 98.9 4.6E-08 1E-12 105.4 16.7 134 684-819 37-193 (268)
477 COG3829 RocR Transcriptional r 98.8 2.9E-08 6.2E-13 112.2 14.1 221 192-591 4-224 (560)
478 PF01163 RIO1: RIO1 family; I 98.8 1.5E-08 3.3E-13 103.0 10.5 126 685-820 2-155 (188)
479 cd00130 PAS PAS domain; PAS mo 98.8 1.3E-07 2.8E-12 80.6 13.9 103 481-586 1-103 (103)
480 cd00130 PAS PAS domain; PAS mo 98.8 1.2E-07 2.7E-12 80.7 13.7 103 198-303 1-103 (103)
481 TIGR02966 phoR_proteo phosphat 98.8 2.7E-08 5.9E-13 110.8 11.1 114 185-314 2-115 (333)
482 KOG1266 Protein kinase [Signal 98.8 1.4E-08 3E-13 107.0 7.3 154 720-896 118-280 (458)
483 PRK11073 glnL nitrogen regulat 98.8 8.1E-08 1.8E-12 108.4 14.2 117 188-314 6-122 (348)
484 PRK11360 sensory histidine kin 98.7 1.5E-07 3.3E-12 113.9 16.6 128 182-315 255-383 (607)
485 PRK11073 glnL nitrogen regulat 98.7 4.1E-08 9E-13 110.8 10.7 111 473-593 8-118 (348)
486 KOG3741 Poly(A) ribonuclease s 98.7 1.6E-07 3.4E-12 105.0 13.8 133 683-818 290-440 (655)
487 PRK11360 sensory histidine kin 98.7 1.4E-07 3.1E-12 114.1 14.1 118 473-596 263-381 (607)
488 COG4248 Uncharacterized protei 98.7 2.5E-07 5.5E-12 100.7 13.6 192 672-900 14-224 (637)
489 COG0478 RIO-like serine/threon 98.7 1.7E-07 3.7E-12 97.8 11.7 138 671-820 93-251 (304)
490 PF13596 PAS_10: PAS domain; P 98.6 1.5E-07 3.3E-12 86.8 9.9 106 191-304 1-106 (106)
491 PF06293 Kdo: Lipopolysacchari 98.6 4.3E-07 9.3E-12 94.6 14.2 126 693-820 31-170 (206)
492 PRK09902 hypothetical protein; 98.6 9.1E-07 2E-11 90.6 15.5 141 678-820 27-179 (216)
493 KOG0501 K+-channel KCNQ [Inorg 98.6 1.5E-07 3.3E-12 104.5 9.4 119 474-592 16-139 (971)
494 TIGR02966 phoR_proteo phosphat 98.6 2.3E-07 5.1E-12 103.3 10.8 104 473-592 7-110 (333)
495 PF06176 WaaY: Lipopolysacchar 98.6 8.7E-07 1.9E-11 91.0 13.4 141 666-819 28-182 (229)
496 PF12860 PAS_7: PAS fold 98.6 2.5E-07 5.4E-12 86.7 8.9 105 195-311 1-115 (115)
497 PF12860 PAS_7: PAS fold 98.5 2.7E-07 5.9E-12 86.4 8.4 104 478-593 1-114 (115)
498 PF13596 PAS_10: PAS domain; P 98.5 3.7E-07 8E-12 84.2 8.9 106 474-587 1-106 (106)
499 KOG0501 K+-channel KCNQ [Inorg 98.5 3.2E-07 6.9E-12 102.1 9.7 121 190-310 15-140 (971)
500 PRK11388 DNA-binding transcrip 98.5 6.4E-06 1.4E-10 100.7 20.9 107 474-591 205-311 (638)
No 1
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-47 Score=403.89 Aligned_cols=234 Identities=44% Similarity=0.769 Sum_probs=213.4
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
....++|++++.||+|+||+||+|+.+.|++.||||+++|..............|..||..++||+||.++..|++...+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 35678999999999999999999999999999999999998887777888999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|+||+.||.|+.+|+++ +.|++..++.|+.+|+.||.|||++|||||||||+|||++.+|+++|+|||+|+..-
T Consensus 101 ylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-- 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-- 176 (357)
T ss_pred EEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc--
Confidence 9999999999999999875 459999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.....+.+++||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+..
T Consensus 177 -------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~ 231 (357)
T KOG0598|consen 177 -------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK 231 (357)
T ss_pred -------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH
Confidence 1123456799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC-CcCChhh
Q 002356 905 KTFANILHKDLKFPSS-TPRSKEQ 927 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~-~~~~~~~ 927 (931)
+++++|+++...+|+. .+..+.+
T Consensus 232 ~~~~~I~~~k~~~~p~~ls~~ard 255 (357)
T KOG0598|consen 232 KMYDKILKGKLPLPPGYLSEEARD 255 (357)
T ss_pred HHHHHHhcCcCCCCCccCCHHHHH
Confidence 9999999999554444 5555444
No 2
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=383.21 Aligned_cols=231 Identities=45% Similarity=0.822 Sum_probs=217.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|+.++.||.|+||+|.+|+++.++..||+|++.+.......+++...+|..+|+.+.||+++++++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 56789999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
|||||++||.|++++++. +.|++..+++++.||+.||+|||+++|++|||||+||||+++|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999875 459999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
..+.+.||||.|+|||++...+|..++|+|+|||++|||+.|.+||.+.++.+
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 33568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCChhhh
Q 002356 906 TFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
++++|+++++.||+.....+..+
T Consensus 249 iY~KI~~~~v~fP~~fs~~~kdL 271 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSYFSSDAKDL 271 (355)
T ss_pred HHHHHHhCcccCCcccCHHHHHH
Confidence 99999999999999987766543
No 3
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-45 Score=405.22 Aligned_cols=264 Identities=39% Similarity=0.670 Sum_probs=224.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+++.||+|+||.||+|+-+.||..||||+++|..+.....+..+..|..+|...++|+||+||..|++.+++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
||||||++||++..+|.+. ..|+++.+++|+.+++.|++.||+.|+|||||||+|+||+..|++||+|||+|......
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999875 45999999999999999999999999999999999999999999999999999765443
Q ss_pred CCCCCCc---chhhhh-cccCCCCc----------------cccccccccccccccCCcccchhhhcCCCCCChhhHHHH
Q 002356 825 PQLLLPT---TNEKKR-RHKGQQNP----------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 884 (931)
Q Consensus 825 ~~~~~~~---~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSl 884 (931)
....... ...... .......+ .+.........+.+|||-|||||++.+.+|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 3211100 000000 00000000 000111223457899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCcCChhhhhc
Q 002356 885 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPRSKEQIRF 930 (931)
Q Consensus 885 Gvil~ell~G~~Pf~~~~~~~~~~~I~~~~--~~~p~~~~~~~~~~~~ 930 (931)
|||||||+.|.+||.+.++.+++.+|++.. +.||...+.+.++.+|
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DL 422 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDL 422 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHH
Confidence 999999999999999999999999999854 8999999999887664
No 4
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.9e-45 Score=386.76 Aligned_cols=284 Identities=52% Similarity=0.927 Sum_probs=241.1
Q ss_pred CCCCCCCCCchhhHHhhc-cccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH
Q 002356 643 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 721 (931)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~ 721 (931)
.+||.....-|..+..+. .....+..++|++++.||.|.-|+||+|+..+++..+|||++.+..+.......+...|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 456666566777777665 4667888999999999999999999999999999999999999998888888999999999
Q ss_pred HHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 722 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 722 il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
||+.++||.++.||..|+.+.+.|+|||||.||+|..++++|+.+.|++..+++|+.+++.||+|||-.|||.|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcc----------------------hhh-hhcc---cC--CCCcccccccc-
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT----------------------NEK-KRRH---KG--QQNPVFMAEPM- 852 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~----------------------~~~-~~~~---~~--~~~~~~~~~~~- 852 (931)
|||.++|++.|+||.++..-...+....... ... ++.. .. ..-+...+++.
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999876433222211100 000 0000 00 00111223333
Q ss_pred ccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 853 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 853 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
..+.+++||-.|+|||++.+.+++.++|+|+||++||||++|..||.|.+..+++.+|+.+.+.||.....+..
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~ 363 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSA 363 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhH
Confidence 56789999999999999999999999999999999999999999999999999999999999999998744443
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9e-45 Score=386.17 Aligned_cols=217 Identities=29% Similarity=0.506 Sum_probs=200.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+.+.||+|+|++||+++++.++..||||.+.+..+ .+...+.+..|+.+|+.++|||||.+++++...+++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 5689999999999999999999999999999999988654 667778889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC------CcEEEEeccCCccc
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 821 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~------g~vkL~DFG~a~~~ 821 (931)
||||+||+|.+++++.+ .+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+..
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999999864 59999999999999999999999999999999999999865 45899999999754
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
. +.....+.+|+|-|||||++....|+.|+|+||+|++||+|++|++||...
T Consensus 166 ~----------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 Q----------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred C----------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3 234556889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q 002356 902 TRQKTFANILHKDL 915 (931)
Q Consensus 902 ~~~~~~~~I~~~~~ 915 (931)
+..+++..|.++.-
T Consensus 218 t~~eL~~~~~k~~~ 231 (429)
T KOG0595|consen 218 TPKELLLYIKKGNE 231 (429)
T ss_pred CHHHHHHHHhcccc
Confidence 99999999988764
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-44 Score=400.55 Aligned_cols=230 Identities=30% Similarity=0.538 Sum_probs=213.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.+|...+.||+|||+.||.+.+..+|..||+|++.+..+........+.+|++|.+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888888899999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|+|..++|..+++++ +.++|.+++.+++||+.||.|||+++|||||||..|+||+.+.+|||+|||+|.....
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~----- 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY----- 170 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC-----
Confidence 999999999999865 5599999999999999999999999999999999999999999999999999965431
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
+.....+++|||.|+|||++...+++..+||||+||+||-|++|+|||...+..+++.
T Consensus 171 ----------------------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 171 ----------------------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred ----------------------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 1234568999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCChhh
Q 002356 909 NILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~~~~ 927 (931)
+|....+.+|+.....+.+
T Consensus 229 ~Ik~~~Y~~P~~ls~~A~d 247 (592)
T KOG0575|consen 229 KIKLNEYSMPSHLSAEAKD 247 (592)
T ss_pred HHHhcCcccccccCHHHHH
Confidence 9999999999955554444
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=388.15 Aligned_cols=247 Identities=37% Similarity=0.629 Sum_probs=218.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
....+|...+.||.|+|++|++|.++.+++.||+|++.|..+.....++-+..|-.+|.+| +||.|++||..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3467999999999999999999999999999999999988777777788888999999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|+||+++|+|.++|++. +.|++.-++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||.|..+...
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999999986 45999999999999999999999999999999999999999999999999999877643
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
....- .+...........+++||-.|.+||++.....++.+|||+||||||+|+.|++||.+.+..
T Consensus 228 ~~~~~--------------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney 293 (604)
T KOG0592|consen 228 QKSQE--------------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY 293 (604)
T ss_pred hcccc--------------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH
Confidence 32210 0000111111236899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcCChhhh
Q 002356 905 KTFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
-++++|++-.+.||+..|..+..|
T Consensus 294 liFqkI~~l~y~fp~~fp~~a~dL 317 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEGFPEDARDL 317 (604)
T ss_pred HHHHHHHHhcccCCCCCCHHHHHH
Confidence 999999999999999988665543
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-44 Score=381.11 Aligned_cols=233 Identities=33% Similarity=0.496 Sum_probs=199.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChH----HHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----KVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
..+.|.+.+.||+|+||.|.++..+.|++.||||++++....... ......+|++||++|+|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 356889999999999999999999999999999999886544322 3344679999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCCc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSC 819 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a~ 819 (931)
+.||||||+.||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||+..+ -.+||+|||+|+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999999876 459999999999999999999999999999999999999876 579999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCC---ChhhHHHHHHHHHHHHcCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~---~~~DiwSlGvil~ell~G~~ 896 (931)
..+ ......++||||.|.|||++.+.++. .++|||||||+||-+++|.+
T Consensus 328 ~~g----------------------------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~p 379 (475)
T KOG0615|consen 328 VSG----------------------------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYP 379 (475)
T ss_pred ccc----------------------------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCC
Confidence 643 12334689999999999999876543 37899999999999999999
Q ss_pred CCCCCCHHH-HHHHHHcCCCCC--CCCCcCChhhhh
Q 002356 897 PFRGKTRQK-TFANILHKDLKF--PSSTPRSKEQIR 929 (931)
Q Consensus 897 Pf~~~~~~~-~~~~I~~~~~~~--p~~~~~~~~~~~ 929 (931)
||.+..... +.++|.+|.+.| |.....+.+++.
T Consensus 380 PFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~d 415 (475)
T KOG0615|consen 380 PFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALD 415 (475)
T ss_pred CcccccCCccHHHHHhcCcccccChhhhhhhHHHHH
Confidence 999876655 899999998755 334444544443
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-44 Score=363.48 Aligned_cols=224 Identities=31% Similarity=0.523 Sum_probs=200.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeE-EEEeCCe-E
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 744 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~-~ 744 (931)
...+|+++++||+|+||.||+|++..+|..+|.|.+..+ ..+....+....|+.+|++|+|||||++++ .|..+.. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 456899999999999999999999999999999999855 446667788899999999999999999998 5555544 8
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~--~g--IiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+||||||.+|+|..+++. ...+.+++..+|.++.|++.||.++|. .. |+||||||.||+|+.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999975 345779999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
+..... .....+++|||.||+||.+.+.+|++++|||||||++|||+.-++||
T Consensus 176 r~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 765421 12345789999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCC-CC
Q 002356 899 RGKTRQKTFANILHKDLK-FP 918 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~~~-~p 918 (931)
.+.+..++.++|.+|++. .|
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p 249 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLP 249 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCc
Confidence 999999999999999764 55
No 10
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=387.36 Aligned_cols=236 Identities=40% Similarity=0.776 Sum_probs=217.8
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
..+..++|.++++||+|.||+|+++..+.+++.||||+++|+.....+.+.....|..|+... +||+++.++.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 367889999999999999999999999999999999999999999999999999999999888 5999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
++|+||||+.||++..+.+ .+.|++..+++|+.+++.||.|||++|||+||||.+|||++.+|++||+|||+|+..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999544433 3559999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.....+++++|||.|||||++.+..|+.++|+|||||+||||+.|++||.|.+
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 12346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCChhhhh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~~~~~ 929 (931)
.++++.+|++....+|-..+.++-.|+
T Consensus 573 Eee~FdsI~~d~~~yP~~ls~ea~~il 599 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRFLSKEAIAIM 599 (694)
T ss_pred HHHHHHHHhcCCCCCCCcccHHHHHHH
Confidence 999999999999999999888776664
No 11
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=360.04 Aligned_cols=229 Identities=29% Similarity=0.494 Sum_probs=203.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-e
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-H 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~ 743 (931)
.+..++.+.++.||+|..|+||+|+|+.|++.||+|++.-. .+....+++.+|+++++.++|||||.+|+.|.... .
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 35567899999999999999999999999999999999432 35667789999999999999999999999999988 5
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
++|+||||+||||..++... +.+++..+-.++.++++||.|||. ++||||||||+|||++..|.|||||||.+....
T Consensus 153 isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999999875 459999999999999999999996 899999999999999999999999999986542
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~- 901 (931)
. ...++++||..|||||.+.+..|+.++||||||++|+||.+|+.||...
T Consensus 231 n-----------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~ 281 (364)
T KOG0581|consen 231 N-----------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN 281 (364)
T ss_pred h-----------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC
Confidence 1 1457899999999999999999999999999999999999999999874
Q ss_pred ----CHHHHHHHHHcCC-CCCCCCCcCChhh
Q 002356 902 ----TRQKTFANILHKD-LKFPSSTPRSKEQ 927 (931)
Q Consensus 902 ----~~~~~~~~I~~~~-~~~p~~~~~~~~~ 927 (931)
+..+++..|..+. ..+|+. ..|.+.
T Consensus 282 ~~~~~~~~Ll~~Iv~~ppP~lP~~-~fS~ef 311 (364)
T KOG0581|consen 282 PPYLDIFELLCAIVDEPPPRLPEG-EFSPEF 311 (364)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCcc-cCCHHH
Confidence 7789999999864 577776 344433
No 12
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.8e-41 Score=364.65 Aligned_cols=226 Identities=33% Similarity=0.528 Sum_probs=206.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|.+.+.||+|+||.||+++.+.+.+.||+|.+.|... .....+.+.+|++|++.|+||||+.++++|+...++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 579999999999999999999999999999999988643 4456788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||.| +|+.++... ..++++.++.++.+++.||.|||+++|+|||+||.|||+..+|++|+||||+|+.++...
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t--- 154 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT--- 154 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc---
Confidence 99955 999999864 459999999999999999999999999999999999999999999999999998764211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
....++.|||.|||||++.+..|+..+|+|||||++|||+.|++||...+..++.+
T Consensus 155 ------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 155 ------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred ------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 23346789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCCh
Q 002356 909 NILHKDLKFPSSTPRSK 925 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~~ 925 (931)
.|++....+|+....+.
T Consensus 211 ~I~~d~v~~p~~~S~~f 227 (808)
T KOG0597|consen 211 SILKDPVKPPSTASSSF 227 (808)
T ss_pred HHhcCCCCCcccccHHH
Confidence 99999999999765544
No 13
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-41 Score=351.75 Aligned_cols=232 Identities=30% Similarity=0.568 Sum_probs=214.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
..+|.+.+.||.|.||+|.+++....|+.||||.+.++...+....-.+.+||+||..|+||||+++|++|++.+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 46899999999999999999999999999999999999888888888899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||..+|.|++++..++ .+++.+++.+++||+.|+.|+|+++++|||||.+|||+++++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~---- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD---- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc----
Confidence 99999999999998864 499999999999999999999999999999999999999999999999999966532
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.....+++|+|.|.+||++.+.+| ++.+|.||||++||.|++|..||.|.+...+
T Consensus 206 ------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 206 ------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred ------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 123458999999999999999988 5789999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCChhhhh
Q 002356 907 FANILHKDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~~~~~~ 929 (931)
+.+|.+|.+.-|..++-...-|+
T Consensus 262 vrQIs~GaYrEP~~PSdA~gLIR 284 (668)
T KOG0611|consen 262 VRQISRGAYREPETPSDASGLIR 284 (668)
T ss_pred HHHhhcccccCCCCCchHHHHHH
Confidence 99999999999988666555544
No 14
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-40 Score=366.78 Aligned_cols=231 Identities=29% Similarity=0.531 Sum_probs=211.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+-|++.+.||.|+.|.|-++++..||+..|||++.+...........+.+||-||+.+.||||+.+|+++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 45688999999999999999999999999999999987666667778899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
+||++||.|++++-+.+ .+++.++..+++||+.|+.|||..+|+||||||+|+||+..+.+||+|||+|....
T Consensus 91 lEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~----- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV----- 163 (786)
T ss_pred EEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-----
Confidence 99999999999998764 49999999999999999999999999999999999999999999999999996532
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
+.....+.||+|.|.|||++.+.+| +.++||||+|||||.|++|+.||++.+...+
T Consensus 164 -----------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 164 -----------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred -----------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 1234567899999999999999988 4699999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcCChhhh
Q 002356 907 FANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
+.++.+|.|.+|++.+..+..+
T Consensus 221 LlKV~~G~f~MPs~Is~eaQdL 242 (786)
T KOG0588|consen 221 LLKVQRGVFEMPSNISSEAQDL 242 (786)
T ss_pred HHHHHcCcccCCCcCCHHHHHH
Confidence 9999999999999888777654
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.4e-40 Score=337.05 Aligned_cols=214 Identities=28% Similarity=0.441 Sum_probs=188.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
+.|+.+..+|+|+||.||+|+++.||+.||||.+..+. .++...+-..+||++|++|+|||+|.++++|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 57999999999999999999999999999999986542 23455566689999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||+.. +.+-|.+.+. .++.+.++.|+.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+...
T Consensus 81 E~~dhT-vL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~------ 152 (396)
T KOG0593|consen 81 EYCDHT-VLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLS------ 152 (396)
T ss_pred eecchH-HHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhc------
Confidence 999554 4445555543 48999999999999999999999999999999999999999999999999997643
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.|.......+.|.+|.|||.+.+ ..|+..+|||++||++.||++|.+.|.|.+.-+.+
T Consensus 153 ---------------------~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQL 211 (396)
T KOG0593|consen 153 ---------------------APGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQL 211 (396)
T ss_pred ---------------------CCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHH
Confidence 12334456788999999999988 78999999999999999999999999999998888
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..|.+
T Consensus 212 y~I~k 216 (396)
T KOG0593|consen 212 YLIRK 216 (396)
T ss_pred HHHHH
Confidence 88876
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=361.37 Aligned_cols=228 Identities=34% Similarity=0.617 Sum_probs=203.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh--HHHHHHHHHHHHHHhcC-CCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 742 (931)
...+.|.+.+.||+|+||+|+++.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456799999999999999999999999999999998776522211 24456668999999998 999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~a~~~ 821 (931)
.+|+|||||.||+|++++... +.+.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 999999999999999999883 459999999999999999999999999999999999999999 99999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CC-ChhhHHHHHHHHHHHHcCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~-~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
. .......+.+||+.|+|||++.+.. |+ .++||||||++||.|++|..||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 1 1123456789999999999999877 75 69999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCc
Q 002356 900 GKTRQKTFANILHKDLKFPSSTP 922 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~~~~p~~~~ 922 (931)
..+...++.+|.++.+.+|....
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~ 247 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL 247 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC
Confidence 99999999999999999999984
No 17
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-40 Score=328.61 Aligned_cols=233 Identities=35% Similarity=0.588 Sum_probs=215.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|.+.+.||.|.||.||+++.+.++..+|+|++.+.........+++.+|++|-..|+||||+++|++|.+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 34679999999999999999999999999999999999887766667788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+++||..+|+|+..|..+....+++.....+++|++.||.|+|.++||||||||+|+|++..|.+||+|||.+...
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~---- 174 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---- 174 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec----
Confidence 9999999999999999777778999999999999999999999999999999999999999999999999998442
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
+...-.+.+||.-|++||...+..++..+|+|++|++.||++.|.+||...+..+
T Consensus 175 -------------------------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 175 -------------------------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred -------------------------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 2334467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCChhh
Q 002356 906 TFANILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~~~ 927 (931)
+++.|.+-.+.+|+..+..+..
T Consensus 230 tYkrI~k~~~~~p~~is~~a~d 251 (281)
T KOG0580|consen 230 TYKRIRKVDLKFPSTISGGAAD 251 (281)
T ss_pred HHHHHHHccccCCcccChhHHH
Confidence 9999999999999877665544
No 18
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=350.37 Aligned_cols=236 Identities=33% Similarity=0.550 Sum_probs=197.9
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-----------HHHHHHHHHHHHHHhcCCCCcc
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----------NKVHRACAEREILDMLDHPFVP 732 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-----------~~~~~~~~E~~il~~l~hpnIv 732 (931)
.....+.|++.+.||+|.||.|.++++..+++.||||++.+.....+ ...+...+||.||++|.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 34557899999999999999999999999999999999987433211 1246788999999999999999
Q ss_pred ceeEEEEe--CCeEEEEEeccCCCCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q 002356 733 ALYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 733 ~l~~~~~~--~~~~~lVmE~~~ggsL~~~l~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~ 809 (931)
+|+++..+ .+.+|||+|||..|.+...-. .+. +++.+++.|++.++.||+|||.+|||||||||+|+||+.+|+
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 99999875 578999999999888765433 344 899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CCChhhHHHHH
Q 002356 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALG 885 (931)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlG 885 (931)
+||+|||.+..+...... +.-......+|||.|+|||.+.+.. -+.+.||||||
T Consensus 249 VKIsDFGVs~~~~~~~~~----------------------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG 306 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDE----------------------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG 306 (576)
T ss_pred EEeeccceeeecccCCcc----------------------ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence 999999999655322100 0001122368999999999997632 24599999999
Q ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCCcCC
Q 002356 886 ILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 886 vil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p~~~~~~ 924 (931)
|+||+|++|+.||.+....+++.+|++..+.||......
T Consensus 307 VTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~ 345 (576)
T KOG0585|consen 307 VTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEIN 345 (576)
T ss_pred hhHHHhhhccCCcccchHHHHHHHHhcCcccCCCccccc
Confidence 999999999999999999999999999999999986433
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-39 Score=349.63 Aligned_cols=218 Identities=28% Similarity=0.427 Sum_probs=191.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--Ce
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--TH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~ 743 (931)
...+.|+.+..||+|+||.||++++..+|+.||+|.+..+.. ......-..+||.||++|+||||++|.+..... ..
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 446789999999999999999999999999999999987643 334455677999999999999999999998765 78
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|||+||| .-+|.-++... .-.|++.+++.|++||+.||+|||.+||+|||||.+||||+.+|.+||+|||+|+.+..
T Consensus 193 iYlVFeYM-dhDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEEecc-cchhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999999 55888887653 45699999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
... ......+-|.+|.|||++.+. .|+.++|+||+||||.||+.|++.|+|.+
T Consensus 271 ~~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t 324 (560)
T KOG0600|consen 271 SGS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT 324 (560)
T ss_pred CCC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence 221 123456789999999999875 68999999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 002356 903 RQKTFANILH 912 (931)
Q Consensus 903 ~~~~~~~I~~ 912 (931)
..+.+.+|.+
T Consensus 325 EveQl~kIfk 334 (560)
T KOG0600|consen 325 EVEQLHKIFK 334 (560)
T ss_pred HHHHHHHHHH
Confidence 9999999976
No 20
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-40 Score=335.56 Aligned_cols=234 Identities=40% Similarity=0.756 Sum_probs=216.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|..++.||+|.||+|-+|+.+.+++.||+|++++.....++.+..-..|-.+|+..+||++..+...|+..+.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 35678999999999999999999999999999999999999988888898899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||++||.|+-+|.+. +.+++..++++..+|+.||.|||+++||.||||.+|+|++.+|++||+|||+|+..-
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999999999874 559999999999999999999999999999999999999999999999999995421
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......+++|||.|+|||++....|+.++|+|.+||+||||++|+.||...+..
T Consensus 320 -------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 320 -------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred -------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 0123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcCChhh
Q 002356 905 KTFANILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~~~~~~~~ 927 (931)
.++..|+.+.+.||......+..
T Consensus 375 kLFeLIl~ed~kFPr~ls~eAkt 397 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRTLSPEAKT 397 (516)
T ss_pred HHHHHHHhhhccCCccCCHHHHH
Confidence 99999999999999987766543
No 21
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.4e-37 Score=353.11 Aligned_cols=259 Identities=35% Similarity=0.623 Sum_probs=206.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998754444555677888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||+||+|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999865 459999999999999999999999999999999999999999999999999986543211000
Q ss_pred CCcchhhh-hcccCCC-------CccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 829 LPTTNEKK-RRHKGQQ-------NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 829 ~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
........ ....... ...............+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 00000000 0000000 000000001112356899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 901 KTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 901 ~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
.+..+.+.+|.. ..+.+|...+.+.+..+
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~ 269 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKD 269 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHH
Confidence 999999999987 45778887776665544
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=333.15 Aligned_cols=240 Identities=25% Similarity=0.402 Sum_probs=210.8
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
....++.+.|.+...||.|..++||+++...++.+||||++..... ....+.+..|+..|..++||||++++.+|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 3456788999999999999999999999999999999999987654 33478899999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+||.||.+||+.++++......+++..+..|++++++||.|||++|.||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999999865666999999999999999999999999999999999999999999999999998665
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
..... ....+ ..+++|||+|||||++.. .+|+.|+||||||++..||.+|..||.
T Consensus 177 ~~~G~----------------------R~~~r-f~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 177 FDSGD----------------------RQVTR-FNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccCc----------------------eeeEe-eccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 42110 00112 268899999999999643 578999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCcCChh
Q 002356 900 GKTRQKTFANILHKDLKFPSSTPRSKE 926 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~~~~p~~~~~~~~ 926 (931)
...+.+++..-+++.+..|.......+
T Consensus 234 k~pPmkvLl~tLqn~pp~~~t~~~~~d 260 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQNDPPTLLTSGLDKD 260 (516)
T ss_pred cCChHHHHHHHhcCCCCCcccccCChH
Confidence 999999999999999887775444443
No 23
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=321.74 Aligned_cols=223 Identities=30% Similarity=0.483 Sum_probs=198.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..+.|++...||+|.|+.|+++.+..+|+.||+|.++...+. ....+.+.+|+.|-+.|+||||+++++.+....+.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 4457899999999999999999999999999999998765443 336678899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCCcccC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTS 822 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a~~~~ 822 (931)
||+|++.|++|..-+-.+ ..+++..+-.+++||++||.|+|.+||||||+||+|+|+-+. .-+||+|||+|...+
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999998665443 348999999999999999999999999999999999999643 359999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.......++|||+|||||++...+|+..+|||+.||+||-|+.|.+||.+.+
T Consensus 165 ----------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 ----------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred ----------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1123456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCC
Q 002356 903 RQKTFANILHKDLKFPS 919 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~ 919 (931)
...++++|..|.+++|+
T Consensus 217 ~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPS 233 (355)
T ss_pred HHHHHHHHhccccCCCC
Confidence 99999999999998887
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=343.85 Aligned_cols=215 Identities=27% Similarity=0.445 Sum_probs=190.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCC-e
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~-~ 743 (931)
...++|++++.||.|+||.||+++.+.++..||||.+++.... ...-.-.+|+..|++|+ ||||+++++++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 4567999999999999999999999999999999999775322 22233468999999998 999999999998877 9
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||| .++|+++++.+ .+.|++..++.|+.||++||+|+|++|++|||+||+|||+.....+||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 89999999987 68899999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.+ .....+.|.+|.|||++.. ..|+.+.|+|++|||++|+.+=++.|.|.+
T Consensus 163 kp----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 KP----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CC----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 22 1234678999999999865 567889999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 002356 903 RQKTFANILH 912 (931)
Q Consensus 903 ~~~~~~~I~~ 912 (931)
..+.+.+|..
T Consensus 215 E~Dqi~KIc~ 224 (538)
T KOG0661|consen 215 EIDQIYKICE 224 (538)
T ss_pred HHHHHHHHHH
Confidence 9888888865
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-37 Score=312.88 Aligned_cols=223 Identities=25% Similarity=0.443 Sum_probs=194.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.+|...+.||+|.||.||++++..||+.||+|.++.....+. ..-...+||+.|+.++|+||+.++++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 579999999999999999999999999999999987643222 2345678999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+ ..+|...++.. ...++...++.|+.++++||+|||++.|+||||||.|+||+++|.+||+|||+|+.++.+..
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 78999999765 45699999999999999999999999999999999999999999999999999987753322
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.....+-|.+|.|||.+++. .|+..+|+||.|||+.||+.|.+.|.|.+.-+.+
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 12233789999999999875 6889999999999999999999999999999999
Q ss_pred HHHHc--CCC---CCCCCC
Q 002356 908 ANILH--KDL---KFPSST 921 (931)
Q Consensus 908 ~~I~~--~~~---~~p~~~ 921 (931)
..|.+ |.+ ++|+..
T Consensus 212 ~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred HHHHHHcCCCCcccCcccc
Confidence 98876 433 555543
No 26
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-39 Score=373.70 Aligned_cols=237 Identities=37% Similarity=0.647 Sum_probs=213.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+++.||+|+||.|.+|+++.|++.||||+++|-.+..+.....|..|..||-..+++-|++++..|++..++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 56788999999999999999999999999999999999997777777888899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||++||+|..++.+.. .+++..+++|+.+|+.||..||+.|+|||||||+||||+..|++||+|||.|-.+...
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998764 6999999999999999999999999999999999999999999999999999665421
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
..-.+...+|||-|++||++.. +.|+..+|+||+||++|||++|..||.
T Consensus 229 --------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 --------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred --------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 1234557799999999999943 458889999999999999999999999
Q ss_pred CCCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 900 GKTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 900 ~~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
..+..++|-+|.+ ..+.||...-+|.++-+
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakd 314 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKD 314 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHH
Confidence 9999999999986 47999976666665543
No 27
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=346.45 Aligned_cols=226 Identities=41% Similarity=0.761 Sum_probs=202.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...++|.+.+.||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+.+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 34678999999999999999999999999999999998754444455677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999875 3489999999999999999999999999999999999999999999999999854310
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 222 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH
Confidence 1123569999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcC
Q 002356 906 TFANILHKDLKFPSSTPR 923 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~ 923 (931)
++++|..+.+.+|...+.
T Consensus 223 ~~~~i~~~~~~~p~~~~~ 240 (329)
T PTZ00263 223 IYEKILAGRLKFPNWFDG 240 (329)
T ss_pred HHHHHhcCCcCCCCCCCH
Confidence 999999999988876543
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.6e-37 Score=339.90 Aligned_cols=224 Identities=40% Similarity=0.718 Sum_probs=199.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999997654434445567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999765 3489999999999999999999999999999999999999999999999999854310
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..++++
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123469999999999999989999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCC
Q 002356 909 NILHKDLKFPSSTPRS 924 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~ 924 (931)
.|..+.+.+|...+..
T Consensus 209 ~i~~~~~~~~~~~~~~ 224 (291)
T cd05612 209 KILAGKLEFPRHLDLY 224 (291)
T ss_pred HHHhCCcCCCccCCHH
Confidence 9999999988776443
No 29
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6e-37 Score=344.43 Aligned_cols=228 Identities=36% Similarity=0.711 Sum_probs=202.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
.+..++|++.+.||.|+||.||+|.+..++ ..||+|.+.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 356779999999999999999999976655 7899999977654445566778899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||+.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999875 3589999999999999999999999999999999999999999999999999854320
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 11245799999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcCC
Q 002356 904 QKTFANILHKDLKFPSSTPRS 924 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p~~~~~~ 924 (931)
..+++.|..+...+|...+..
T Consensus 234 ~~~~~~i~~~~~~~p~~~~~~ 254 (340)
T PTZ00426 234 LLIYQKILEGIIYFPKFLDNN 254 (340)
T ss_pred HHHHHHHhcCCCCCCCCCCHH
Confidence 999999999998888775543
No 30
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1e-36 Score=348.38 Aligned_cols=258 Identities=36% Similarity=0.585 Sum_probs=203.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987655455566778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999765 3489999999999999999999999999999999999999999999999999854321110000
Q ss_pred Ccchhhhhccc--------------------CCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHH
Q 002356 830 PTTNEKKRRHK--------------------GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (931)
Q Consensus 830 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 889 (931)
........... ................+.+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 00000000000 0000000000111234568999999999999988999999999999999
Q ss_pred HHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 890 ell~G~~Pf~~~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
+|++|.+||.+.+..+...++.. ..+.+|.....+.+..+
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 281 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVD 281 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHH
Confidence 99999999999888777777764 45677776666655544
No 31
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.8e-37 Score=348.68 Aligned_cols=258 Identities=36% Similarity=0.592 Sum_probs=203.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999999999999999987544445566778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
||+||+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999765 3589999999999999999999999999999999999999999999999999854321111000
Q ss_pred Ccchhhhhcc----------c----------CCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHH
Q 002356 830 PTTNEKKRRH----------K----------GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (931)
Q Consensus 830 ~~~~~~~~~~----------~----------~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 889 (931)
.......... . ................+.+||+.|+|||++.+..++.++|||||||+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 0000000000 0 0000000000011223568999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 890 ell~G~~Pf~~~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
+|++|++||.+.+..+...++.. ..+.+|.....+.+..+
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~ 281 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASD 281 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHH
Confidence 99999999999988888888876 34667766656655544
No 32
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.8e-37 Score=346.72 Aligned_cols=258 Identities=36% Similarity=0.654 Sum_probs=203.2
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++++..+++.||||++.+...........+.+|+.+|+.++||||++++++|...+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998754444555667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++..........
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999765 349999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcchhhhhcc-------c----CCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 829 LPTTNEKKRRH-------K----GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 829 ~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
........... . ................+.+||+.|+|||++....++.++|||||||++|+|++|.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 00000000000 0 000000000000112245799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcC--CCCCCCCCcCChhhh
Q 002356 898 FRGKTRQKTFANILHK--DLKFPSSTPRSKEQI 928 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~--~~~~p~~~~~~~~~~ 928 (931)
|.+.+..+.+..+.+. .+.+|.....+....
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 271 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAK 271 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHH
Confidence 9999998988888764 456777665555443
No 33
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.4e-37 Score=349.59 Aligned_cols=256 Identities=36% Similarity=0.639 Sum_probs=200.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||.|+||.||++.+..+++.||||++.+...........+.+|+.+++.++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999987654434455677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+.......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986432110000
Q ss_pred -----CCcchhhhh---cccCCCCc------------cccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 829 -----LPTTNEKKR---RHKGQQNP------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 829 -----~~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
......... ........ ...........+.+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 000000000 00000000 0000000011246799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCcCChh
Q 002356 889 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPRSKE 926 (931)
Q Consensus 889 ~ell~G~~Pf~~~~~~~~~~~I~~--~~~~~p~~~~~~~~ 926 (931)
|+|++|.+||.+.+..+.+..|.. ..+.+|.....+.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 278 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVE 278 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHH
Confidence 999999999999888888888876 45677765444443
No 34
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=338.44 Aligned_cols=236 Identities=27% Similarity=0.459 Sum_probs=199.3
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT- 742 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 742 (931)
+.++.....+...||+|+||+||++.+.++. .+|+|.+......... ...+.+|+.+|.+|+|||||++++++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4456667778888999999999999985432 2999999876543333 788999999999999999999999998877
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCcEEEecCC-cEEEEeccCCcc
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSCL 820 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g-IiHrDIKP~NIll~~~g-~vkL~DFG~a~~ 820 (931)
..+|||||+++|+|..++.......++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++.
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 7999999999999999998743466999999999999999999999999 99999999999999998 999999999966
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc--CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
..... .......||+.|||||++. ...|+.++||||||++||||++|+.||
T Consensus 194 ~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 194 KVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred ecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 43110 1122367999999999999 668999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcC--CCCCCCCCcCChhhh
Q 002356 899 RGKTRQKTFANILHK--DLKFPSSTPRSKEQI 928 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~--~~~~p~~~~~~~~~~ 928 (931)
.+....++...+..+ .+.+|..++.....+
T Consensus 247 ~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l 278 (362)
T KOG0192|consen 247 EDLAPVQVASAVVVGGLRPPIPKECPPHLSSL 278 (362)
T ss_pred CCCCHHHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence 999888888888654 357777766554443
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-36 Score=340.02 Aligned_cols=222 Identities=41% Similarity=0.774 Sum_probs=195.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+.|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765444555667888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999999765 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~ 914 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+..+.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCh
Q 002356 915 LKFPSSTPRSK 925 (931)
Q Consensus 915 ~~~p~~~~~~~ 925 (931)
+.+|...+...
T Consensus 212 ~~~p~~~~~~~ 222 (323)
T cd05571 212 IRFPRTLSPEA 222 (323)
T ss_pred CCCCCCCCHHH
Confidence 88887655443
No 36
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=331.99 Aligned_cols=230 Identities=31% Similarity=0.484 Sum_probs=190.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC--eEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~ 745 (931)
..+|...+.||+|+||.||++.+..+|..+|+|.+... .....+.+.+|+.+|.+++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 34688999999999999999999999999999988765 2222677899999999999999999999754443 689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~~ 824 (931)
++|||+.+|+|.+++.+.++ .+++..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||++......
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 99999999999999998765 6999999999999999999999999999999999999999 799999999998654310
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCC-CC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KT 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~-~~ 902 (931)
.........+.||+.|||||++... ...+++|||||||++.||+||++||.. ..
T Consensus 172 ------------------------~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~ 227 (313)
T KOG0198|consen 172 ------------------------GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE 227 (313)
T ss_pred ------------------------cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc
Confidence 0111233467899999999999853 334599999999999999999999997 45
Q ss_pred HHHHHHHHHcCC--CCCCCCCcCCh
Q 002356 903 RQKTFANILHKD--LKFPSSTPRSK 925 (931)
Q Consensus 903 ~~~~~~~I~~~~--~~~p~~~~~~~ 925 (931)
..+.+-.|..+. +.+|...+..+
T Consensus 228 ~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 228 EAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred hHHHHHHHhccCCCCCCCcccCHHH
Confidence 555555665544 56777644433
No 37
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-37 Score=339.80 Aligned_cols=230 Identities=27% Similarity=0.449 Sum_probs=202.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
...|+....||+|+.|.||.+....+++.||+|.+... .+....-+.+|+.+|+.++|+|||.+++.|...+.+|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~---~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR---KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEec---cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 35799999999999999999999999999999999765 344456688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||++||+|.+.+... .+++.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+...
T Consensus 349 MEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~--- 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE--- 422 (550)
T ss_pred EeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc---
Confidence 9999999999998763 4999999999999999999999999999999999999999999999999999665321
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
...-.+.+|||.|||||++....|++++||||||++.+||+-|++||-.+++...+
T Consensus 423 ------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl 478 (550)
T KOG0578|consen 423 ------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 478 (550)
T ss_pred ------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence 11235789999999999999999999999999999999999999999999998888
Q ss_pred HHHH-cCCCCCCCCCcCChhhhhc
Q 002356 908 ANIL-HKDLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 908 ~~I~-~~~~~~p~~~~~~~~~~~~ 930 (931)
..|. +|.+.+......|..--+|
T Consensus 479 yLIa~ng~P~lk~~~klS~~~kdF 502 (550)
T KOG0578|consen 479 YLIATNGTPKLKNPEKLSPELKDF 502 (550)
T ss_pred HHHhhcCCCCcCCccccCHHHHHH
Confidence 8886 4666666655555554444
No 38
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-36 Score=345.27 Aligned_cols=232 Identities=34% Similarity=0.651 Sum_probs=198.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..+.++|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 45678999999999999999999999999999999997654434445566788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999753 38999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.....+.+||+.|+|||++.+.. ++.++|||||||+||+|++|++||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123567999999999997643 678999999999999999999999999
Q ss_pred CHHHHHHHHHcC--CCCCCCCCcCChh
Q 002356 902 TRQKTFANILHK--DLKFPSSTPRSKE 926 (931)
Q Consensus 902 ~~~~~~~~I~~~--~~~~p~~~~~~~~ 926 (931)
+....+.+|... .+.+|.....+..
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~ 277 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKH 277 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHH
Confidence 999999999874 4677776544443
No 39
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-36 Score=345.59 Aligned_cols=257 Identities=37% Similarity=0.607 Sum_probs=199.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||++++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.|...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997654333445567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999765 458999999999999999999999999999999999999999999999999985432110000
Q ss_pred CCcchhhhhcc----------------cCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHH
Q 002356 829 LPTTNEKKRRH----------------KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 829 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 892 (931)
........+.. ...................+||+.|||||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 00000000000 00000000000111223568999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHcC--CCCCCCCCcCChhh
Q 002356 893 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPRSKEQ 927 (931)
Q Consensus 893 ~G~~Pf~~~~~~~~~~~I~~~--~~~~p~~~~~~~~~ 927 (931)
+|+.||.+.+..+....+... .+.+|.....+...
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 275 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREA 275 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHH
Confidence 999999999888888777754 34555544444443
No 40
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-36 Score=343.94 Aligned_cols=259 Identities=36% Similarity=0.641 Sum_probs=204.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++...+++|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654444555677888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 348999999999999999999999999999999999999999999999999986442111000
Q ss_pred CCc-chhhhhcccCCCC------c-cccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 829 LPT-TNEKKRRHKGQQN------P-VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 829 ~~~-~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... ............. . ...........+.+||+.|+|||++.+..++.++|||||||++|+|++|++||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 000 0000000000000 0 0000001122356899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 901 KTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 901 ~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
.+..+.+.+|.. ..+.+|+..+.+.+..+
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~ 269 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKD 269 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHH
Confidence 999999999886 45678877666655443
No 41
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.6e-37 Score=317.56 Aligned_cols=217 Identities=23% Similarity=0.323 Sum_probs=188.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 743 (931)
...+.|+.+..|++|+||.||+++++.|+..||+|.++...-.. ...---.+||.+|.+++|||||.+-++... -+.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 34578999999999999999999999999999999997653211 112234689999999999999999988763 467
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+||||||| .-+|.+++..-+ +.|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++.
T Consensus 152 iy~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 152 IYIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred eeeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 99999999 568999998764 5699999999999999999999999999999999999999999999999999988763
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
+. ......+-|.+|.|||.+.+. .|+.++|+||+|||+.||+++++.|.|.+
T Consensus 230 p~---------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s 282 (419)
T KOG0663|consen 230 PL---------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS 282 (419)
T ss_pred Cc---------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence 21 223456789999999999875 58899999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 002356 903 RQKTFANILH 912 (931)
Q Consensus 903 ~~~~~~~I~~ 912 (931)
..+.+.+|.+
T Consensus 283 E~dQl~~If~ 292 (419)
T KOG0663|consen 283 EIDQLDKIFK 292 (419)
T ss_pred hHHHHHHHHH
Confidence 9999999876
No 42
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-37 Score=340.17 Aligned_cols=231 Identities=25% Similarity=0.465 Sum_probs=207.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe-EEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~l 746 (931)
.+.|.+++.+|+|+||.+++++++..+..||+|.+.-.....+.. ....+|..+++++.|||||.+++.|..++. ++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 568999999999999999999999999999999998765433333 467889999999999999999999998877 999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||+||+||+|.+.+.++.+..|+++.+..|+.||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+......
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999998877889999999999999999999999999999999999999999999999999997754211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
....+.+|||.||+||.+.+.+|+.++|||||||++|||++=+++|.+.+...+
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC-CCCCCCCcCChh
Q 002356 907 FANILHKD-LKFPSSTPRSKE 926 (931)
Q Consensus 907 ~~~I~~~~-~~~p~~~~~~~~ 926 (931)
+.+|..+. ...|+....+..
T Consensus 215 i~ki~~~~~~Plp~~ys~el~ 235 (426)
T KOG0589|consen 215 ILKINRGLYSPLPSMYSSELR 235 (426)
T ss_pred HHHHhhccCCCCCccccHHHH
Confidence 99999988 466665554444
No 43
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.8e-36 Score=343.14 Aligned_cols=233 Identities=35% Similarity=0.658 Sum_probs=199.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+++
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45668999999999999999999999999999999999765443444556678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998753 3899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
. .......+||+.|+|||++.... ++.++|||||||++|+|++|.+||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123567999999999997543 77899999999999999999999999
Q ss_pred CCHHHHHHHHHcCC--CCCCCCCcCChh
Q 002356 901 KTRQKTFANILHKD--LKFPSSTPRSKE 926 (931)
Q Consensus 901 ~~~~~~~~~I~~~~--~~~p~~~~~~~~ 926 (931)
.+....+.+|.+.. +.+|.....+..
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 277 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKE 277 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHH
Confidence 99999999998753 667765444443
No 44
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.7e-36 Score=334.26 Aligned_cols=220 Identities=41% Similarity=0.728 Sum_probs=194.8
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||+|+||.||++.+..+++.||+|++.+...........+.+|+.+|+.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999999865444455667788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 35899999999999999999999999999999999999999999999999998532100
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~ 916 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..++++.+..+.+.
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCh
Q 002356 917 FPSSTPRSK 925 (931)
Q Consensus 917 ~p~~~~~~~ 925 (931)
+|...+...
T Consensus 212 ~~~~~~~~~ 220 (312)
T cd05585 212 FPDGFDRDA 220 (312)
T ss_pred CCCcCCHHH
Confidence 887765443
No 45
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.8e-36 Score=343.10 Aligned_cols=235 Identities=35% Similarity=0.614 Sum_probs=200.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35567999999999999999999999999999999999765444444556678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+|||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998753 3899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC----CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998654 377899999999999999999999999
Q ss_pred CCHHHHHHHHHcC--CCCCCCCCcCChhhh
Q 002356 901 KTRQKTFANILHK--DLKFPSSTPRSKEQI 928 (931)
Q Consensus 901 ~~~~~~~~~I~~~--~~~~p~~~~~~~~~~ 928 (931)
.+....+.+|..+ .+.+|.....+.+..
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 279 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAK 279 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHH
Confidence 9999999999875 467887665555443
No 46
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=337.21 Aligned_cols=224 Identities=33% Similarity=0.554 Sum_probs=203.6
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (931)
....|++.+.||+|.||.||+|.++.+|+.||+|.+.+...........+.+|+.||+++. |||||.++++|++...++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3568999999999999999999999999999999999877666566778899999999997 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC----CcEEEEeccCCccc
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLT 821 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~----g~vkL~DFG~a~~~ 821 (931)
+|||+|.||.|++.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+... +.+|++|||++...
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999999999876 39999999999999999999999999999999999999643 47999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.. .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.
T Consensus 190 ~~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 190 KP----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred cC----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 31 12345789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCC
Q 002356 902 TRQKTFANILHKDLKFPSST 921 (931)
Q Consensus 902 ~~~~~~~~I~~~~~~~p~~~ 921 (931)
+....+.+|+.+++.|+...
T Consensus 242 ~~~~~~~~i~~~~~~f~~~~ 261 (382)
T KOG0032|consen 242 TEFEIFLAILRGDFDFTSEP 261 (382)
T ss_pred ChhHHHHHHHcCCCCCCCCC
Confidence 99999999999998776543
No 47
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.4e-36 Score=334.54 Aligned_cols=221 Identities=40% Similarity=0.784 Sum_probs=194.2
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765444555667788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999988764 35899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~ 914 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+..+.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011124569999999999998899999999999999999999999999999999999999888
Q ss_pred CCCCCCCcCC
Q 002356 915 LKFPSSTPRS 924 (931)
Q Consensus 915 ~~~p~~~~~~ 924 (931)
+.+|...+..
T Consensus 212 ~~~p~~~~~~ 221 (323)
T cd05595 212 IRFPRTLSPE 221 (323)
T ss_pred CCCCCCCCHH
Confidence 8888765543
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.3e-36 Score=334.72 Aligned_cols=220 Identities=43% Similarity=0.797 Sum_probs=193.8
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765444556677889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999988764 35899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~ 914 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..++++.+..+.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011234579999999999998889999999999999999999999999999999999998888
Q ss_pred CCCCCCCcC
Q 002356 915 LKFPSSTPR 923 (931)
Q Consensus 915 ~~~p~~~~~ 923 (931)
+.+|...+.
T Consensus 212 ~~~p~~~~~ 220 (328)
T cd05593 212 IKFPRTLSA 220 (328)
T ss_pred ccCCCCCCH
Confidence 888876543
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.7e-36 Score=334.78 Aligned_cols=213 Identities=39% Similarity=0.681 Sum_probs=191.4
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||+|.+..+++.||+|++.+...........+.+|+.++..++||||+++++++...+++|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998764444455667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 3489999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999999888888
Q ss_pred HHHcC
Q 002356 909 NILHK 913 (931)
Q Consensus 909 ~I~~~ 913 (931)
.+...
T Consensus 209 ~i~~~ 213 (333)
T cd05600 209 NLKYW 213 (333)
T ss_pred HHHhc
Confidence 88753
No 50
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=335.25 Aligned_cols=238 Identities=25% Similarity=0.400 Sum_probs=207.0
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.+....+++++.||+|.||.||++.... ...+|+|.++...+ ..+.+.+|+++|++|.|++||++++++..+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 3556778889999999999999999999943 34799999877533 335677999999999999999999999998
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|||||||..|+|.++|....+..+.......++.||++|++||+++++|||||...|||++.++.+||+|||+|+..
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 89999999999999999999866677999999999999999999999999999999999999999999999999999743
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.... + .......-...|+|||++....++.+||||||||+||||+| |+.||.+
T Consensus 354 ~d~~----------Y----------------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ 407 (468)
T KOG0197|consen 354 GDDE----------Y----------------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG 407 (468)
T ss_pred CCCc----------e----------------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC
Confidence 3211 1 11111123457999999999999999999999999999997 9999999
Q ss_pred CCHHHHHHHHHcC-CCCCCCCCcCChhhhhc
Q 002356 901 KTRQKTFANILHK-DLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 901 ~~~~~~~~~I~~~-~~~~p~~~~~~~~~~~~ 930 (931)
.+..++++.|.+| .+.-|..+|.+..++|.
T Consensus 408 msn~ev~~~le~GyRlp~P~~CP~~vY~lM~ 438 (468)
T KOG0197|consen 408 MSNEEVLELLERGYRLPRPEGCPDEVYELMK 438 (468)
T ss_pred CCHHHHHHHHhccCcCCCCCCCCHHHHHHHH
Confidence 9999999999998 58999999998887763
No 51
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.4e-36 Score=333.01 Aligned_cols=226 Identities=36% Similarity=0.700 Sum_probs=197.2
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVm 748 (931)
+|.+.+.||+|+||.||++.+..+++.||+|++.+...........+..|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999876444444556677788888877 5899999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998765 34899999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..++++
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCC
Q 002356 909 NILHKDLKFPSSTPRS 924 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~ 924 (931)
.|..+.+.+|...+..
T Consensus 212 ~i~~~~~~~p~~~s~~ 227 (323)
T cd05616 212 SIMEHNVAYPKSMSKE 227 (323)
T ss_pred HHHhCCCCCCCcCCHH
Confidence 9999998888765443
No 52
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1e-35 Score=332.48 Aligned_cols=226 Identities=36% Similarity=0.704 Sum_probs=197.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC-CccceeEEEEeCCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~lVm 748 (931)
+|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+ +|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999876544445567788899999999764 6888999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 34899999999999999999999999999999999999999999999999998432100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224579999999999999989999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCC
Q 002356 909 NILHKDLKFPSSTPRS 924 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~ 924 (931)
.|.+....+|...+..
T Consensus 212 ~i~~~~~~~~~~~~~~ 227 (324)
T cd05587 212 SIMEHNVSYPKSLSKE 227 (324)
T ss_pred HHHcCCCCCCCCCCHH
Confidence 9999988888765443
No 53
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=341.26 Aligned_cols=208 Identities=30% Similarity=0.514 Sum_probs=189.4
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-C-----CCccceeEEEEeCCe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 743 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~~~ 743 (931)
+|.+++.||+|+||+|.+|.+.+|++.||||+++.. +....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 899999999999999999999999999999999753 455667778999999996 4 399999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC--cEEEEeccCCccc
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLT 821 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g--~vkL~DFG~a~~~ 821 (931)
+|||+|++ .-+|+++++.+....++...++.++.||+.||.+||+.||||+||||+||||.+.+ .|||+|||+|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 88999999988778899999999999999999999999999999999999997544 6999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
+. ...+.+.+..|.|||++.+.+|+.+.|+||||||+.||++|.+.|.|.
T Consensus 342 ~q------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQ------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CC------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 31 112667899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+..+++..|..
T Consensus 392 ne~DQl~~I~e 402 (586)
T KOG0667|consen 392 NEYDQLARIIE 402 (586)
T ss_pred CHHHHHHHHHH
Confidence 99999998876
No 54
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.7e-35 Score=330.62 Aligned_cols=226 Identities=37% Similarity=0.697 Sum_probs=196.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVm 748 (931)
+|+..+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999999999999999998764434445567788999998885 578889999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 34999999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+...+++
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234569999999999998889999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcCC
Q 002356 909 NILHKDLKFPSSTPRS 924 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~~ 924 (931)
.|..+.+.+|...+..
T Consensus 212 ~i~~~~~~~p~~~~~~ 227 (323)
T cd05615 212 SIMEHNVSYPKSLSKE 227 (323)
T ss_pred HHHhCCCCCCccCCHH
Confidence 9999998888765543
No 55
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.4e-35 Score=331.39 Aligned_cols=224 Identities=39% Similarity=0.759 Sum_probs=193.9
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH---HhcCCCCccceeEEEEeCCeEEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999875433344456677777665 456799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+.|++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988764 34899999999999999999999999999999999999999999999999988432100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......+|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+++
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123567999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcCC
Q 002356 908 ANILHKDLKFPSSTPRS 924 (931)
Q Consensus 908 ~~I~~~~~~~p~~~~~~ 924 (931)
..+..+...+|...+..
T Consensus 211 ~~i~~~~~~~p~~~~~~ 227 (324)
T cd05589 211 DSIVNDEVRYPRFLSRE 227 (324)
T ss_pred HHHHhCCCCCCCCCCHH
Confidence 99999988888765543
No 56
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.7e-35 Score=324.55 Aligned_cols=225 Identities=32% Similarity=0.570 Sum_probs=189.2
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++...+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 47889999999999999999999999999999876544333444567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886544446899999999999999999999999999999999999999999999999998543100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH----HH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QK 905 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~ 905 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. ..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234699999999999999999999999999999999999999987544 23
Q ss_pred HHHHHHcCCCCCCCCCc
Q 002356 906 TFANILHKDLKFPSSTP 922 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~ 922 (931)
+...+......+|...+
T Consensus 213 ~~~~~~~~~~~~~~~~s 229 (285)
T cd05631 213 VDRRVKEDQEEYSEKFS 229 (285)
T ss_pred HHHHhhcccccCCccCC
Confidence 44444455556665443
No 57
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-36 Score=333.87 Aligned_cols=262 Identities=36% Similarity=0.591 Sum_probs=216.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
++..-|..++.||-|+||.|.+|.-.+|...||+|.+.|.....+..+.....|..||...+++.||+||..|++++++|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 45667999999999999999999999999999999999887777888888999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||+|++||++..+|-+. ..|.++.+++|+.++.+|++++|+.|+|||||||+|||||.+|++||+|||+|..+.+..
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999999875 459999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCCcchhhhh-cccCCCC------c-----ccc---ccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHH
Q 002356 826 QLLLPTTNEKKR-RHKGQQN------P-----VFM---AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (931)
Q Consensus 826 ~~~~~~~~~~~~-~~~~~~~------~-----~~~---~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 890 (931)
....-..+.+.+ ....... . ... ...-....+.+||+.|+|||++...+|+-.+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 221111111111 0000000 0 000 000012346799999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCcCChhhhh
Q 002356 891 MLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPRSKEQIR 929 (931)
Q Consensus 891 ll~G~~Pf~~~~~~~~~~~I~~--~~~~~p~~~~~~~~~~~ 929 (931)
|+.|++||.+.++.+...+|++ .-+.||...-.|.+.++
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~ 904 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALD 904 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHH
Confidence 9999999999999888888875 56788888877777665
No 58
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-37 Score=321.85 Aligned_cols=236 Identities=36% Similarity=0.676 Sum_probs=213.8
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
..+...+|..+..||.|+||+|.++..+.+...||||+++++.......++.-..|-++|... +-|.+++++.+|+.-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 356778999999999999999999999999999999999999888888888788888998877 5679999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||++||+|.-.++.. +.+-+..+.+|+.+|+-||-|||++|||.||||.+|||++.+|++||+|||++..--
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred heeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999999999888764 348899999999999999999999999999999999999999999999999995421
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. ....+.+++|||.|+|||++...+|+.++|+||+||+||||+.|++||.+++
T Consensus 502 ~---------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 502 F---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred c---------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 0 1123568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCChhhh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
..+++++|...+..+|...+.++.+|
T Consensus 555 E~elF~aI~ehnvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 555 EDELFQAIMEHNVSYPKSLSKEAVAI 580 (683)
T ss_pred HHHHHHHHHHccCcCcccccHHHHHH
Confidence 99999999999999999887766554
No 59
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=314.10 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=188.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC-ccceeEEEEeCC----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~---- 742 (931)
...|..++.||+|+||+||+++++.+|+.||+|.+...... ........+|+.+|+.|+|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45789999999999999999999999999999998765332 123345678999999999999 999999998877
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 743 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 743 --~~~lVmE~~~ggsL~~~l~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
.+++||||+ .-+|..++..... ..++...++.+++||+.||+|||++||+||||||.||||+.+|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987543 35788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+... -+......-++|.+|.|||++.+. .|+...||||+|||++||+++++.
T Consensus 168 ra~~---------------------------ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFS---------------------------IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhc---------------------------CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 7442 122334566899999999999887 788999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.|.+..+.+..|.+
T Consensus 221 FpG~se~~ql~~If~ 235 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFR 235 (323)
T ss_pred CCCCcHHHHHHHHHH
Confidence 999999888888865
No 60
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=324.55 Aligned_cols=231 Identities=31% Similarity=0.494 Sum_probs=207.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+=|.+.+.||+|-|..|.++++.-||..||||++.+..+.+. ....+.+|+..|+.+.|||||++|++......+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 3569999999999999999999999999999999998766443 445688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG~a~~~~~~~~ 826 (931)
+|+-++|+|++|+.+.. ..++++.+++|+.||+.|+.|+|+..+|||||||+||++- .-|-|||+|||++..+
T Consensus 96 LELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf----- 169 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF----- 169 (864)
T ss_pred EEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC-----
Confidence 99999999999998764 4499999999999999999999999999999999998775 5689999999998543
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.|.....+++|+..|-|||++.+..|+ +++||||||||||-|++|++||...+..+
T Consensus 170 -----------------------~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE 226 (864)
T KOG4717|consen 170 -----------------------QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE 226 (864)
T ss_pred -----------------------CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh
Confidence 233445688999999999999999986 58999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCcCChhhh
Q 002356 906 TFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
.+-.|+.-++..|+-....+..+
T Consensus 227 TLTmImDCKYtvPshvS~eCrdL 249 (864)
T KOG4717|consen 227 TLTMIMDCKYTVPSHVSKECRDL 249 (864)
T ss_pred hhhhhhcccccCchhhhHHHHHH
Confidence 99999999999999877766654
No 61
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.1e-35 Score=329.41 Aligned_cols=221 Identities=38% Similarity=0.742 Sum_probs=192.8
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999875443445566777898998877 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999998765 35999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..++++.|.++
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCC
Q 002356 914 DLKFPSSTPRS 924 (931)
Q Consensus 914 ~~~~p~~~~~~ 924 (931)
...+|...+..
T Consensus 212 ~~~~~~~~~~~ 222 (320)
T cd05590 212 EVVYPTWLSQD 222 (320)
T ss_pred CCCCCCCCCHH
Confidence 88888765443
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.8e-36 Score=336.12 Aligned_cols=256 Identities=39% Similarity=0.687 Sum_probs=204.6
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++...+++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 459999999999999999999999999999999999999999999999999987543221000
Q ss_pred CCcchhhhh--cccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 829 LPTTNEKKR--RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 829 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
......... ......................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 000000000 000000000000001223456799999999999999999999999999999999999999999999899
Q ss_pred HHHHHc--CCCCCCCCCcCChh
Q 002356 907 FANILH--KDLKFPSSTPRSKE 926 (931)
Q Consensus 907 ~~~I~~--~~~~~p~~~~~~~~ 926 (931)
+.+|.. ..+.+|.....+.+
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~ 260 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPE 260 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHH
Confidence 999988 67777776644433
No 63
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-35 Score=329.07 Aligned_cols=220 Identities=40% Similarity=0.754 Sum_probs=192.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3689999999999999999999999999876544455566777899999876 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999998764 34899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++++|..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999989999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcC
Q 002356 914 DLKFPSSTPR 923 (931)
Q Consensus 914 ~~~~p~~~~~ 923 (931)
...+|...+.
T Consensus 212 ~~~~p~~~~~ 221 (321)
T cd05591 212 DVLYPVWLSK 221 (321)
T ss_pred CCCCCCCCCH
Confidence 8888876543
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.3e-35 Score=331.78 Aligned_cols=220 Identities=41% Similarity=0.788 Sum_probs=193.0
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765444455667788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
+|..++... ..+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 358999999999999999999997 79999999999999999999999999998432100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++++.+..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01122456999999999999989999999999999999999999999999999999999988
Q ss_pred CCCCCCCCcC
Q 002356 914 DLKFPSSTPR 923 (931)
Q Consensus 914 ~~~~p~~~~~ 923 (931)
.+.+|...+.
T Consensus 212 ~~~~p~~~~~ 221 (325)
T cd05594 212 EIRFPRTLSP 221 (325)
T ss_pred CCCCCCCCCH
Confidence 8888876543
No 65
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-35 Score=327.38 Aligned_cols=220 Identities=41% Similarity=0.801 Sum_probs=189.9
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++++...........+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999876443444555666777777655 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 34999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01223457999999999999988999999999999999999999999999999999999888
Q ss_pred CCCCCCCCcC
Q 002356 914 DLKFPSSTPR 923 (931)
Q Consensus 914 ~~~~p~~~~~ 923 (931)
...+|...+.
T Consensus 212 ~~~~~~~~~~ 221 (316)
T cd05592 212 RPHFPRWISK 221 (316)
T ss_pred CCCCCCCCCH
Confidence 7777766543
No 66
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=304.55 Aligned_cols=221 Identities=30% Similarity=0.530 Sum_probs=193.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (931)
...|...+.||+|..+.|-+|.++.++..+|+|++...... .......-.+|+.||+++ +||||+++.++|+..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 45788889999999999999999999999999998643221 122345556899999998 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+|+|+|+.|.|+++|... -.+++..++.|++|+++|+.|||.++||||||||+|||++++-++||+|||+++..
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999874 45999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC------CCCCChhhHHHHHHHHHHHHcCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~ 895 (931)
. +.......+|||+|+|||.+.+ .+|+..+|+|++|||||.|+.|.
T Consensus 174 ~----------------------------~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 E----------------------------PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred C----------------------------CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 2 1122345799999999999854 46777999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCC
Q 002356 896 TPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
+||+.....-++..|.+|+++|-
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~ 248 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFR 248 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccC
Confidence 99999888889999999998664
No 67
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=325.11 Aligned_cols=236 Identities=33% Similarity=0.583 Sum_probs=208.4
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
.++..+.|..-+.||+|+||.||-|+-+.||+.||+|.+.+.....+.......+|..||.+++.++||.+-..|++.+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 34667789999999999999999999999999999999987766666666777899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||..|+||+|.-+|...+...|++..+++|+.+|+.||++||..+||.||+||+|||+|+.|+|+|+|+|+|+.+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999999877666799999999999999999999999999999999999999999999999999976531
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~-- 901 (931)
. ......+||.+|||||++.+..|++..|+|||||+||+|+.|+.||...
T Consensus 340 g----------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 G----------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred C----------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 1 1122448999999999999999999999999999999999999999853
Q ss_pred --CHHHHHHHHHcCCCCCCCCCcCChhh
Q 002356 902 --TRQKTFANILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 902 --~~~~~~~~I~~~~~~~p~~~~~~~~~ 927 (931)
...++=+.++.....+|+..+..+..
T Consensus 392 Kvk~eEvdrr~~~~~~ey~~kFS~eaks 419 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYSDKFSEEAKS 419 (591)
T ss_pred hhhHHHHHHHHhcchhhcccccCHHHHH
Confidence 33577778888888999776655544
No 68
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=332.13 Aligned_cols=236 Identities=38% Similarity=0.686 Sum_probs=215.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
.++...+++++..||-|+||.|-+|........+|+|+++|....+......+..|..||..+++|+||++|-.|.+..+
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY 494 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence 34667789999999999999999999876666799999999888888888889999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|++||-|=||.|+.+|..+ +.|.+..+++|+..+++|++|||++|||.|||||+|++++.+|.+||.|||+|+....
T Consensus 495 vYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999999876 4599999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
...+.+++|||.|.|||++...+++.++|.||||+++|||++|.+||.+.++
T Consensus 573 ----------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 573 ----------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred ----------------------------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 2346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC--CCCCCCCCcCChhhhh
Q 002356 904 QKTFANILHK--DLKFPSSTPRSKEQIR 929 (931)
Q Consensus 904 ~~~~~~I~~~--~~~~p~~~~~~~~~~~ 929 (931)
..+|+.|++| .+.||.-.+.++.++.
T Consensus 625 mktYn~ILkGid~i~~Pr~I~k~a~~Li 652 (732)
T KOG0614|consen 625 MKTYNLILKGIDKIEFPRRITKTATDLI 652 (732)
T ss_pred HHHHHHHHhhhhhhhcccccchhHHHHH
Confidence 9999999998 4799987777766653
No 69
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3e-35 Score=328.57 Aligned_cols=221 Identities=42% Similarity=0.758 Sum_probs=189.5
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36899999999999999999999999997654333334455555655 46788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---------- 148 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999999843210
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++..++.+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 149 -----------------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred -----------------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 011223457999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCC
Q 002356 914 DLKFPSSTPRS 924 (931)
Q Consensus 914 ~~~~p~~~~~~ 924 (931)
.+.+|...+..
T Consensus 212 ~~~~~~~~~~~ 222 (323)
T cd05575 212 PLRLKPNISVS 222 (323)
T ss_pred CCCCCCCCCHH
Confidence 88877665433
No 70
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.7e-35 Score=327.50 Aligned_cols=220 Identities=44% Similarity=0.784 Sum_probs=188.4
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|+. +++.++||||+++++++...+..|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999997654333333445555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE---------- 148 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC----------
Confidence 9999888764 4589999999999999999999999999999999999999999999999999853210
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
+........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+..+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 149 -----------------PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred -----------------CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 001123457999999999999888999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcC
Q 002356 914 DLKFPSSTPR 923 (931)
Q Consensus 914 ~~~~p~~~~~ 923 (931)
.+.+|...+.
T Consensus 212 ~~~~~~~~~~ 221 (321)
T cd05603 212 PLQLPGGKTV 221 (321)
T ss_pred CCCCCCCCCH
Confidence 8888865543
No 71
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.4e-35 Score=327.56 Aligned_cols=222 Identities=40% Similarity=0.728 Sum_probs=187.7
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHH-HHHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER-EILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||||+.|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3689999999999999999999999999765332223333444444 456888999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 34889999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCcCCh
Q 002356 914 DLKFPSSTPRSK 925 (931)
Q Consensus 914 ~~~~p~~~~~~~ 925 (931)
...+++..+.+.
T Consensus 212 ~~~~~~~~~~~~ 223 (325)
T cd05602 212 PLQLKPNITNSA 223 (325)
T ss_pred CcCCCCCCCHHH
Confidence 887776554443
No 72
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.8e-35 Score=327.41 Aligned_cols=225 Identities=38% Similarity=0.671 Sum_probs=192.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++|+||+.+++++...+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998654444455667888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.|++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--- 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC---
Confidence 999999999999753 2458999999999999999999999999999999999999999999999999985432100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 157 -----------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 011123469999999999963 4467799999999999999999999999988
Q ss_pred HHHHHHHHcCC--CCCCCC
Q 002356 904 QKTFANILHKD--LKFPSS 920 (931)
Q Consensus 904 ~~~~~~I~~~~--~~~p~~ 920 (931)
.+.+..|.... +.+|..
T Consensus 214 ~~~~~~i~~~~~~~~~~~~ 232 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPD 232 (331)
T ss_pred HHHHHHHHcCCCcccCCCc
Confidence 88888887643 455554
No 73
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=5.6e-35 Score=326.37 Aligned_cols=223 Identities=45% Similarity=0.783 Sum_probs=191.4
Q ss_pred cccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
++.||+|+||.||+|.+. .+++.||+|++.+.... .......+..|+.+|+.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46889999999764321 22344567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999765 34889999999999999999999999999999999999999999999999998532100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112345799999999999988899999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCcCCh
Q 002356 910 ILHKDLKFPSSTPRSK 925 (931)
Q Consensus 910 I~~~~~~~p~~~~~~~ 925 (931)
+.++.+.+|+..+...
T Consensus 212 ~~~~~~~~~~~~~~~~ 227 (323)
T cd05584 212 ILKGKLNLPPYLTPEA 227 (323)
T ss_pred HHcCCCCCCCCCCHHH
Confidence 9999988887755433
No 74
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.5e-35 Score=324.32 Aligned_cols=220 Identities=40% Similarity=0.760 Sum_probs=189.8
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..++..||+|++.+..............|..++..+ +||||+++++++...+++|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999875433334456677788888765 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 34899999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++++.+..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCcC
Q 002356 914 DLKFPSSTPR 923 (931)
Q Consensus 914 ~~~~p~~~~~ 923 (931)
...+|...+.
T Consensus 212 ~~~~~~~~~~ 221 (316)
T cd05620 212 TPHYPRWITK 221 (316)
T ss_pred CCCCCCCCCH
Confidence 8878775443
No 75
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.8e-35 Score=329.72 Aligned_cols=231 Identities=39% Similarity=0.703 Sum_probs=197.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|.+.+.||+|+||.||++.+..+++.||+|++++...........+..|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765444556677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--- 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK--- 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC---
Confidence 9999999999998752 359999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc------CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
........||+.|+|||++. ...++.++|||||||++|+|++|+.||...+
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 -----------------------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred -----------------------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 00112346899999999986 4567789999999999999999999999998
Q ss_pred HHHHHHHHHcCC--CCCCCCCcCChh
Q 002356 903 RQKTFANILHKD--LKFPSSTPRSKE 926 (931)
Q Consensus 903 ~~~~~~~I~~~~--~~~p~~~~~~~~ 926 (931)
....+.+|++.. +.+|.....+..
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSD 239 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHH
Confidence 888888887643 566765544443
No 76
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4e-35 Score=328.69 Aligned_cols=225 Identities=37% Similarity=0.635 Sum_probs=193.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+.+++++...++.|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997644334445566788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--- 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC---
Confidence 9999999999997642 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........||+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 011123569999999999875 4577899999999999999999999999998
Q ss_pred HHHHHHHHcCC--CCCCCC
Q 002356 904 QKTFANILHKD--LKFPSS 920 (931)
Q Consensus 904 ~~~~~~I~~~~--~~~p~~ 920 (931)
.+.+.+|.... +.+|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~ 232 (331)
T cd05624 214 VETYGKIMNHEERFQFPSH 232 (331)
T ss_pred HHHHHHHHcCCCcccCCCc
Confidence 89998887754 455554
No 77
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.6e-35 Score=326.65 Aligned_cols=219 Identities=43% Similarity=0.757 Sum_probs=187.9
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654433344455556655 46778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..++.+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCc
Q 002356 914 DLKFPSSTP 922 (931)
Q Consensus 914 ~~~~p~~~~ 922 (931)
.+.+++..+
T Consensus 212 ~~~~~~~~~ 220 (325)
T cd05604 212 PLVLRPGAS 220 (325)
T ss_pred CccCCCCCC
Confidence 877766433
No 78
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.3e-35 Score=325.44 Aligned_cols=220 Identities=38% Similarity=0.718 Sum_probs=188.3
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++++...........+..|..+++.+ +||||++++++|...+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999999999999999999876554555667788999999988 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---------CHH
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 904 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~---------~~~ 904 (931)
.........||+.|+|||++.+..++.++|+|||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 011223457999999999999999999999999999999999999999631 223
Q ss_pred HHHHHHHcCCCCCCCCCcC
Q 002356 905 KTFANILHKDLKFPSSTPR 923 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~~~~ 923 (931)
.+++.+..+.+.+|...+.
T Consensus 212 ~~~~~~~~~~~~~p~~~~~ 230 (329)
T cd05588 212 YLFQVILEKQIRIPRSLSV 230 (329)
T ss_pred HHHHHHHcCCCCCCCCCCH
Confidence 4667778888888876543
No 79
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-34 Score=322.64 Aligned_cols=221 Identities=40% Similarity=0.761 Sum_probs=193.5
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|+.+++.+ +||||+++++++...+.+|+||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544455667778899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999998765 35999999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+..+++..+..+
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCC
Q 002356 914 DLKFPSSTPRS 924 (931)
Q Consensus 914 ~~~~p~~~~~~ 924 (931)
.+.+|...+..
T Consensus 212 ~~~~~~~~~~~ 222 (318)
T cd05570 212 EVRYPRWLSKE 222 (318)
T ss_pred CCCCCCcCCHH
Confidence 88888765433
No 80
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.5e-34 Score=321.92 Aligned_cols=219 Identities=38% Similarity=0.756 Sum_probs=188.1
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++++..+++.||+|++.+..............|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999875433333445667788888764 999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 34899999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++++.+..+
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999988999999999999999999999999999999999988887
Q ss_pred CCCCCCCCc
Q 002356 914 DLKFPSSTP 922 (931)
Q Consensus 914 ~~~~p~~~~ 922 (931)
...+|...+
T Consensus 212 ~~~~~~~~~ 220 (316)
T cd05619 212 NPCYPRWLT 220 (316)
T ss_pred CCCCCccCC
Confidence 777776543
No 81
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=301.66 Aligned_cols=225 Identities=30% Similarity=0.499 Sum_probs=189.4
Q ss_pred cccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEE
Q 002356 671 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 671 y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVm 748 (931)
|++. ..||+|+|+.|-.|....++..||||++.|. ..-...++.+|++++.++ +|+||++++++|+++..+||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4443 4699999999999999999999999999876 334567889999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCcccCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~~~~~~~ 825 (931)
|.|.||+|..++..+ ++|++.++..+.++|+.||.|||.+||.||||||+|||....+ .||||||.+...+....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999875 5699999999999999999999999999999999999997655 48999999985432111
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
... | ..-....+-+|+-.|||||++. ...|+.+.|.||||+|||-|+.|.+||.|
T Consensus 234 ~~s----------------p----astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 DCS----------------P----ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CCC----------------C----CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 100 0 0112234668999999999873 34678899999999999999999999976
Q ss_pred CC---------------HHHHHHHHHcCCCCCCCC
Q 002356 901 KT---------------RQKTFANILHKDLKFPSS 920 (931)
Q Consensus 901 ~~---------------~~~~~~~I~~~~~~~p~~ 920 (931)
.. ...+|+.|..|.+.||+-
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdk 328 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK 328 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChh
Confidence 32 257899999999999974
No 82
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-34 Score=325.32 Aligned_cols=225 Identities=36% Similarity=0.642 Sum_probs=192.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+.+++++...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999997643333444556788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 9999999999997642 358999999999999999999999999999999999999999999999999985421100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 01122357999999999986 34578899999999999999999999999999
Q ss_pred HHHHHHHHcCC--CCCCCC
Q 002356 904 QKTFANILHKD--LKFPSS 920 (931)
Q Consensus 904 ~~~~~~I~~~~--~~~p~~ 920 (931)
.+.+.+|.... +.+|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~ 232 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQ 232 (332)
T ss_pred HHHHHHHhCCCccccCCCc
Confidence 99999998754 445554
No 83
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=308.76 Aligned_cols=216 Identities=27% Similarity=0.426 Sum_probs=188.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-----CC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 742 (931)
...|..++.||.|+||.|..+.++.+|..||+|.+... +......++..+|+++|+.++|+||+.+++++.. -.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 45677789999999999999999999999999988643 4456678889999999999999999999999865 46
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+|+|+| +.+|...++.+. .+++..++.+++||+.||.|+|+.||+||||||+|+|++.+..+||+|||+|+...
T Consensus 100 DvYiV~elM-etDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 789999999 899999998753 49999999999999999999999999999999999999999999999999997754
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
..+ ....-...+.|.+|.|||++. ...|+.+.||||+|||+.||++|++.|.|.
T Consensus 177 ~~~-------------------------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 177 KFF-------------------------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred ccC-------------------------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 220 001123467899999999985 467899999999999999999999999999
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+..+.++.|+.
T Consensus 232 d~v~Ql~lI~~ 242 (359)
T KOG0660|consen 232 DYVHQLQLILE 242 (359)
T ss_pred chHHHHHHHHH
Confidence 99888888765
No 84
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2e-34 Score=322.81 Aligned_cols=220 Identities=38% Similarity=0.721 Sum_probs=187.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876554555667788899988777 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~---------- 148 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC----------
Confidence 9999988764 3599999999999999999999999999999999999999999999999999853210
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC---------CCHH
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 904 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~---------~~~~ 904 (931)
.........||+.|+|||++.+..++.++|||||||++|+|++|+.||.. ....
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 00112345799999999999999999999999999999999999999952 2234
Q ss_pred HHHHHHHcCCCCCCCCCcC
Q 002356 905 KTFANILHKDLKFPSSTPR 923 (931)
Q Consensus 905 ~~~~~I~~~~~~~p~~~~~ 923 (931)
.+.+.+..+...+|...+.
T Consensus 212 ~~~~~i~~~~~~~p~~~~~ 230 (329)
T cd05618 212 YLFQVILEKQIRIPRSLSV 230 (329)
T ss_pred HHHHHHhcCCCCCCCCCCH
Confidence 4666777888888876543
No 85
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.5e-34 Score=321.65 Aligned_cols=221 Identities=38% Similarity=0.706 Sum_probs=188.4
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..+ +||||+.+++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999999999999999999876554555667788999999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~---------- 148 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG---------- 148 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC----------
Confidence 9999988764 3599999999999999999999999999999999999999999999999999853210
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC-------CCHHHH
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-------KTRQKT 906 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~-------~~~~~~ 906 (931)
........+||+.|+|||++.+..++.++|||||||+||+|++|..||.. .....+
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 149 -----------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred -----------------CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 00112346799999999999999999999999999999999999999953 233456
Q ss_pred HHHHHcCCCCCCCCCcCC
Q 002356 907 FANILHKDLKFPSSTPRS 924 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~~ 924 (931)
++.+..+.+.+|...+..
T Consensus 212 ~~~~~~~~~~~p~~~~~~ 229 (327)
T cd05617 212 FQVILEKPIRIPRFLSVK 229 (327)
T ss_pred HHHHHhCCCCCCCCCCHH
Confidence 667777777888765443
No 86
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.4e-34 Score=313.31 Aligned_cols=224 Identities=32% Similarity=0.575 Sum_probs=188.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999998999999999976544333444566789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999999887654456999999999999999999999999999999999999999999999999998543110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH----
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK---- 905 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---- 905 (931)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 01123468999999999998889999999999999999999999998866543
Q ss_pred HHHHHHcCCCCCCCCC
Q 002356 906 TFANILHKDLKFPSST 921 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~ 921 (931)
+...+..+...+|...
T Consensus 213 ~~~~~~~~~~~~~~~~ 228 (285)
T cd05605 213 VERRVKEDQEEYSEKF 228 (285)
T ss_pred HHHHhhhcccccCccc
Confidence 3334444455555443
No 87
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=301.72 Aligned_cols=237 Identities=36% Similarity=0.688 Sum_probs=210.8
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (931)
..+.+..++|.+++.||+|+|.+|.++++++|.+.||+|++++....+.+.++=...|-.+..+. +||++|-++.+|+.
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34557789999999999999999999999999999999999998888888888888888888776 79999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
++.+++|.||++||+|.-+++++ +.++++.++++..+|+.||.|||++|||.||||.+|+|++..|++||+|+|+++.
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999999999888876 4599999999999999999999999999999999999999999999999999954
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
. ..+.+.+++++|||.|+|||++.+..|++.+|+|+||++|+||+.|+.||.-
T Consensus 401 ~---------------------------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 G---------------------------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred C---------------------------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 2 1234567799999999999999999999999999999999999999999962
Q ss_pred -------C-CHHHHHHHHHcCCCCCCCCCcCChhh
Q 002356 901 -------K-TRQKTFANILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 901 -------~-~~~~~~~~I~~~~~~~p~~~~~~~~~ 927 (931)
. +.+=+++-|+.+++.+|-..+..+..
T Consensus 454 vgm~n~d~ntedylfqvilekqiriprslsvkas~ 488 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASH 488 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhcccccceeehhhHH
Confidence 2 23346677789999999887765543
No 88
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.4e-34 Score=320.41 Aligned_cols=226 Identities=44% Similarity=0.746 Sum_probs=186.8
Q ss_pred CccccccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .......+..|+.+++.+ +||||+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999874 47899999999764322 223446677899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+.+++|.+++..+ ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999999764 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~-- 901 (931)
. ........||+.|+|||++.+. .++.++|||||||++|+|++|+.||...
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112345799999999999765 4788999999999999999999999642
Q ss_pred --CHHHHHHHHHcCCCCCCCCCcC
Q 002356 902 --TRQKTFANILHKDLKFPSSTPR 923 (931)
Q Consensus 902 --~~~~~~~~I~~~~~~~p~~~~~ 923 (931)
....+...+......+|...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFPSFIGP 236 (332)
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCH
Confidence 3445666677777777665443
No 89
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-34 Score=321.70 Aligned_cols=222 Identities=43% Similarity=0.765 Sum_probs=191.3
Q ss_pred cccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
++.||+|+||.||++.+. .+++.||+|++.+... .......+..|+.+|++++||||+++++++...+.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 357999999999999873 5789999999986532 222345567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------ 151 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------ 151 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC------
Confidence 9999999999764 34899999999999999999999999999999999999999999999999998543210
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I 910 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01123457999999999999888999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCcCCh
Q 002356 911 LHKDLKFPSSTPRSK 925 (931)
Q Consensus 911 ~~~~~~~p~~~~~~~ 925 (931)
.+..+.+|...+...
T Consensus 211 ~~~~~~~p~~~~~~~ 225 (318)
T cd05582 211 LKAKLGMPQFLSPEA 225 (318)
T ss_pred HcCCCCCCCCCCHHH
Confidence 998888887655443
No 90
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-36 Score=319.82 Aligned_cols=214 Identities=28% Similarity=0.467 Sum_probs=188.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
...|+....||+|+||.||++.+..+++.||+|++.... ....+..+.+|+.+|..++++||.++|+.|..+..++++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 346888899999999999999999999999999997653 344667889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||.||++.+.++.. ..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++....
T Consensus 90 Mey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~----- 162 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLT----- 162 (467)
T ss_pred HHHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeee-----
Confidence 9999999999999764 345889999999999999999999999999999999999999999999999985432
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......+++|||.|||||++.+..|+.++||||||++.|||++|.+||....+..++
T Consensus 163 ----------------------~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl 220 (467)
T KOG0201|consen 163 ----------------------NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL 220 (467)
T ss_pred ----------------------chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE
Confidence 1112236899999999999999999999999999999999999999999887775555
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..|-+
T Consensus 221 flIpk 225 (467)
T KOG0201|consen 221 FLIPK 225 (467)
T ss_pred EeccC
Confidence 44443
No 91
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.1e-34 Score=309.94 Aligned_cols=219 Identities=33% Similarity=0.584 Sum_probs=183.1
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||+|+||.||++.+..+++.||+|.+.+...........+..|+.+++.++||||+++++++.....+|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999998765444444456678899999999999999999999999999999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 757 FLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 757 ~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
..++... ....+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 9887532 23458999999999999999999999999999999999999999999999999985432100
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHH
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANI 910 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~I 910 (931)
.......||+.|+|||++.+..++.++|+|||||++|+|++|+.||...+. ..+...+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 112245689999999999999999999999999999999999999986532 3445555
Q ss_pred HcCCCCCCCCCc
Q 002356 911 LHKDLKFPSSTP 922 (931)
Q Consensus 911 ~~~~~~~p~~~~ 922 (931)
..+...+|...+
T Consensus 214 ~~~~~~~~~~~~ 225 (280)
T cd05608 214 LNDSVTYPDKFS 225 (280)
T ss_pred cccCCCCcccCC
Confidence 566666665443
No 92
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.6e-34 Score=311.88 Aligned_cols=214 Identities=25% Similarity=0.405 Sum_probs=182.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 5689999999999999999999999999999999865421 22234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99995 59999887543 45899999999999999999999999999999999999999999999999998542110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
........|++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011123468999999999875 5678899999999999999999999999888877
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+..+.+
T Consensus 213 ~~~~~~ 218 (288)
T cd07871 213 LHLIFR 218 (288)
T ss_pred HHHHHH
Confidence 777654
No 93
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=8.1e-34 Score=311.07 Aligned_cols=215 Identities=25% Similarity=0.380 Sum_probs=182.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999876432 2334566788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.++.|..+.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 154 (287)
T cd07848 80 EYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--- 154 (287)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---
Confidence 999887776554332 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........|++.|+|||++.+..++.++|+|||||++|+|++|++||.+.+..+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 155 -----------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred -----------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999998889999999999999999999999999887766555
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.+.+
T Consensus 212 ~~~~ 215 (287)
T cd07848 212 TIQK 215 (287)
T ss_pred HHHH
Confidence 5443
No 94
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-35 Score=309.70 Aligned_cols=207 Identities=26% Similarity=0.459 Sum_probs=176.8
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----CeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~ 744 (931)
.|.-.+.+|+|+||.||.+....++..+|||..-.+. .--.+|+.+|+.++|||||++..+|... -+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 5888999999999999999999999999999875431 1224699999999999999999888632 255
Q ss_pred EEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 002356 745 CLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~a~~~ 821 (931)
.+||||+ .-+|+++++.. ....++.-.++.+..||+.||.|||+.||+||||||.|+|++.+ |.+||||||.|+..
T Consensus 98 nlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 7899999 77999998741 23558999999999999999999999999999999999999976 89999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. .....+...|..|.|||.+.+. .|+.+.||||.||++.||+.|++.|.|
T Consensus 177 ~~----------------------------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VK----------------------------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred cc----------------------------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 31 1223467789999999999774 688999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
++..+++..|.+
T Consensus 229 ~s~~dQL~eIik 240 (364)
T KOG0658|consen 229 DSSVDQLVEIIK 240 (364)
T ss_pred CCHHHHHHHHHH
Confidence 999888887765
No 95
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.1e-34 Score=321.39 Aligned_cols=215 Identities=41% Similarity=0.741 Sum_probs=184.9
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc---CCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
||+|+||.||++.+..+++.||+|++.+..............|..++..+ +||||+.+++++...+.+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765443334445566677777665 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~ 912 (931)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..++++.|..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112346799999999999754 478899999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 002356 913 KDLKFPSS 920 (931)
Q Consensus 913 ~~~~~p~~ 920 (931)
+...+|..
T Consensus 212 ~~~~~~~~ 219 (330)
T cd05586 212 GKVRFPKN 219 (330)
T ss_pred CCCCCCCc
Confidence 88888764
No 96
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=321.81 Aligned_cols=234 Identities=29% Similarity=0.510 Sum_probs=212.1
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
.+.....|.+.+.||+|.|+.|.++++..++..||+|.+.+..... .....+.+|+++|+.|+|||||+++.+......
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 3455678999999999999999999999999999999999876544 444459999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||+.+|.+++++.+.+ .+.+..++.++.|++.|++|||+++|||||||.+||||+.+..+||+|||++..+.
T Consensus 130 lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999999998864 37779999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
......+++|++.|.|||++.+..| ++.+|+||||++||-|+.|.+||.+.+
T Consensus 207 ---------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 207 ---------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred ---------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 2344568899999999999999877 569999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCcCChhhh
Q 002356 903 RQKTFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 903 ~~~~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
..+.-..++.|++.+|-....+++.+
T Consensus 260 lk~Lr~rvl~gk~rIp~~ms~dce~l 285 (596)
T KOG0586|consen 260 LKELRPRVLRGKYRIPFYMSCDCEDL 285 (596)
T ss_pred cccccchheeeeecccceeechhHHH
Confidence 99999999999999999998888765
No 97
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.3e-33 Score=329.60 Aligned_cols=225 Identities=24% Similarity=0.404 Sum_probs=192.4
Q ss_pred CCCccccccccccCcEEEEEEEEecC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~-~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
...|.+.+.||+|+||.||++.+..+ +..+|+|.+... .......+.+|+.+|+.++||||+++++++...+.+||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999998877 788999976443 33445567789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 747 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
||||++||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999999988642 2345899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
. ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus 223 ~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~ 277 (478)
T PTZ00267 223 V-------------------------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR 277 (478)
T ss_pred c-------------------------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0 011234567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCC-CCCC
Q 002356 905 KTFANILHKDLK-FPSS 920 (931)
Q Consensus 905 ~~~~~I~~~~~~-~p~~ 920 (931)
+++..++.+... +|..
T Consensus 278 ~~~~~~~~~~~~~~~~~ 294 (478)
T PTZ00267 278 EIMQQVLYGKYDPFPCP 294 (478)
T ss_pred HHHHHHHhCCCCCCCcc
Confidence 999999887653 4433
No 98
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.1e-33 Score=317.86 Aligned_cols=231 Identities=24% Similarity=0.353 Sum_probs=182.7
Q ss_pred ccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (931)
+++..++|++.+.||.|+||.||++.+. .+++.||+|.+.... .......+.+|+.+|+.+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 3466789999999999999999999853 345789999986532 233456788999999999 89999999998
Q ss_pred EEeC-CeEEEEEeccCCCCHHHHHhhCC----------------------------------------------------
Q 002356 738 FQTK-THVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (931)
Q Consensus 738 ~~~~-~~~~lVmE~~~ggsL~~~l~~~~---------------------------------------------------- 764 (931)
+... ..+++||||+++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8654 56899999999999999987532
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 765 --------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 765 --------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 12477888999999999999999999999999999999999999999999999864321100
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHcCC
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK-TFANILHKD 914 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~-~~~~I~~~~ 914 (931)
........+++.|+|||++.+..++.++|||||||+||+|++ |..||.+....+ +...+..+.
T Consensus 230 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 294 (338)
T cd05102 230 ---------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT 294 (338)
T ss_pred ---------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC
Confidence 011223456789999999998889999999999999999996 999998765443 444444443
Q ss_pred -CCCCCCC
Q 002356 915 -LKFPSST 921 (931)
Q Consensus 915 -~~~p~~~ 921 (931)
...|...
T Consensus 295 ~~~~~~~~ 302 (338)
T cd05102 295 RMRAPENA 302 (338)
T ss_pred CCCCCCCC
Confidence 3344433
No 99
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.4e-33 Score=306.88 Aligned_cols=223 Identities=45% Similarity=0.811 Sum_probs=199.2
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.||+|++.+...........+.+|+++++.++||||+++++++.....+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765545556678889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.....|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+..+
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468999999999988888899999999999999999999999988888899
Q ss_pred HHHcCCCCCCCCCcC
Q 002356 909 NILHKDLKFPSSTPR 923 (931)
Q Consensus 909 ~I~~~~~~~p~~~~~ 923 (931)
++..+...+|...+.
T Consensus 209 ~~~~~~~~~~~~~~~ 223 (290)
T cd05580 209 KILEGKVRFPSFFSP 223 (290)
T ss_pred HHhcCCccCCccCCH
Confidence 999888888876543
No 100
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.9e-33 Score=308.32 Aligned_cols=254 Identities=60% Similarity=1.037 Sum_probs=204.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 37999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.|++|.+++.......+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987655679999999999999999999999999999999999999999999999999986543221110
Q ss_pred CCcchhhhhcc--cCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
........... ....................|+..|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000000111112233456899999999999998899999999999999999999999999998888
Q ss_pred HHHHHcCCCCCCCCCc
Q 002356 907 FANILHKDLKFPSSTP 922 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~ 922 (931)
+..+....+.+|....
T Consensus 241 ~~~~~~~~~~~~~~~~ 256 (316)
T cd05574 241 FSNILKKEVTFPGSPP 256 (316)
T ss_pred HHHHhcCCccCCCccc
Confidence 8888888887777653
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-33 Score=319.78 Aligned_cols=197 Identities=26% Similarity=0.386 Sum_probs=172.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+...+|++++.||.|+||.||+|.+..+++.||+|.... ..+.+|+.+|+.|+||||++++++|......+
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 456789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+|||++ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 67899888764 348999999999999999999999999999999999999999999999999985321100
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 0112345799999999999999999999999999999999999988754
No 102
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.2e-33 Score=328.75 Aligned_cols=231 Identities=29% Similarity=0.427 Sum_probs=195.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC---
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--- 742 (931)
...++|++.+.||+|+||.||++.+..+++.||||++..... .......+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 445799999999999999999999999999999999876533 3445567889999999999999999988775332
Q ss_pred -----eEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEec
Q 002356 743 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 743 -----~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DF 815 (931)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 478999999999999998753 2346899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
|+++....... ........||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 188 Gls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99865421100 11223567999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCC-CCCCCCc
Q 002356 896 TPFRGKTRQKTFANILHKDL-KFPSSTP 922 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~~~~-~~p~~~~ 922 (931)
.||.+.+..+++.+++.+.. .+|...+
T Consensus 243 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
T PTZ00283 243 RPFDGENMEEVMHKTLAGRYDPLPPSIS 270 (496)
T ss_pred CCCCCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 99999999999999888765 3454443
No 103
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-33 Score=309.93 Aligned_cols=212 Identities=25% Similarity=0.434 Sum_probs=176.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||.|+||.||++.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999875422 12234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 578888876543 45889999999999999999999999999999999999999999999999998532110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC-HHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 905 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-~~~ 905 (931)
........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.. ..+
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011123468999999999865 457889999999999999999999998753 334
Q ss_pred HHHHH
Q 002356 906 TFANI 910 (931)
Q Consensus 906 ~~~~I 910 (931)
.++.+
T Consensus 213 ~~~~~ 217 (303)
T cd07869 213 QLERI 217 (303)
T ss_pred HHHHH
Confidence 44444
No 104
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.8e-33 Score=310.68 Aligned_cols=211 Identities=27% Similarity=0.450 Sum_probs=185.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++++.||+|+||.||++++..++..+|+|.+.... .......+.+|+++|+.++||||+++++++...+.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 2345567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 999999999999999765 3489999999999999999999986 699999999999999999999999999853310
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112456999999999999988999999999999999999999999887766
Q ss_pred HHHHH
Q 002356 905 KTFAN 909 (931)
Q Consensus 905 ~~~~~ 909 (931)
++...
T Consensus 209 ~~~~~ 213 (331)
T cd06649 209 ELEAI 213 (331)
T ss_pred HHHHH
Confidence 65443
No 105
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=312.41 Aligned_cols=228 Identities=30% Similarity=0.487 Sum_probs=195.2
Q ss_pred cccc--ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 671 FRPI--KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 671 y~i~--~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
|++. +.||+|.||+||-++++.+|+.||||++.|-.+.... ...+.+|+.||++++||.||.+-..|+..+.+|+||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 4544 6899999999999999999999999999887664433 378899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCCcccCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a~~~~~~~ 825 (931)
|.+ .|+..+++-......+++...++++.||+.||.|||-+||+|+||||+|||+.+. ..+||||||+|+.++...
T Consensus 643 EKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 643 EKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 999 5555555555555679999999999999999999999999999999999999643 479999999998765221
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
...+.+|||.|+|||++..++|...-|+||.|||+|--+.|..||.. .++
T Consensus 722 ----------------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEd 771 (888)
T KOG4236|consen 722 ----------------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DED 771 (888)
T ss_pred ----------------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccc
Confidence 12367999999999999999999999999999999999999999964 346
Q ss_pred HHHHHHcCCCCCCCCC--cCChhhhhc
Q 002356 906 TFANILHKDLKFPSST--PRSKEQIRF 930 (931)
Q Consensus 906 ~~~~I~~~~~~~p~~~--~~~~~~~~~ 930 (931)
+-.+|.+..|-||+++ .++.++|+|
T Consensus 772 IndQIQNAaFMyPp~PW~eis~~Aidl 798 (888)
T KOG4236|consen 772 INDQIQNAAFMYPPNPWSEISPEAIDL 798 (888)
T ss_pred hhHHhhccccccCCCchhhcCHHHHHH
Confidence 7788899999888764 355666654
No 106
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-34 Score=311.77 Aligned_cols=229 Identities=25% Similarity=0.421 Sum_probs=186.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.++...|++++.||.||.+.||+|..-+ .+.||+|.+... ..+...++.+.+|+.+|.+| +|.+|+++++|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 4677889999999999999999998844 455666654332 23566788999999999999 69999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+||||||- ..+|..+|+... ..++.-.+++|..|||.|+.++|+.||||.||||.|+|+. .|.+||+|||+|..+..
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 99999986 889999998754 3355569999999999999999999999999999999998 78999999999965532
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-----------CCChhhHHHHHHHHHHHH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEML 892 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-----------~~~~~DiwSlGvil~ell 892 (931)
+.. +-...+.+||+.||+||++.... .+.++||||||||||+|+
T Consensus 512 DTT-------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 512 DTT-------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred ccc-------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 221 12234678999999999996543 345899999999999999
Q ss_pred cCCCCCCCC-CHHHHHHHHHcCC--CCCCCCCcC
Q 002356 893 YGYTPFRGK-TRQKTFANILHKD--LKFPSSTPR 923 (931)
Q Consensus 893 ~G~~Pf~~~-~~~~~~~~I~~~~--~~~p~~~~~ 923 (931)
+|++||..- +....+..|..-+ ++||...+.
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~ 600 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN 600 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCCCCc
Confidence 999999753 3555666666653 477776544
No 107
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=317.65 Aligned_cols=222 Identities=23% Similarity=0.331 Sum_probs=191.3
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..|.+..+...+...||+|.||+||++.+-++ ||||+++... ..++..+.|.+|+.+|++-+|.||+-+.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 45667778888999999999999999999654 9999998753 4566899999999999999999999999999988
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
.. .||+.+|+|.+|+.+++-.. ..|....++.|++||++|+.|||.++|||||||..|||+..+++|||+|||++...
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 87 99999999999999998664 45999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.. + . .........|+..|||||++. ..+|++.+|||||||++|||++|..||
T Consensus 539 ~~-------------w--~----------g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 TR-------------W--S----------GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred ee-------------e--c----------cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 10 1 0 001122345889999999995 357889999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCC
Q 002356 899 RGKTRQKTFANILHKD 914 (931)
Q Consensus 899 ~~~~~~~~~~~I~~~~ 914 (931)
...+.++++.++=+|.
T Consensus 594 si~~~dqIifmVGrG~ 609 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRGY 609 (678)
T ss_pred CCCChhheEEEecccc
Confidence 9888888888777774
No 108
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.9e-33 Score=313.10 Aligned_cols=211 Identities=22% Similarity=0.395 Sum_probs=175.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----CeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~ 744 (931)
+|++.+.||+|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999986532 2233445788999999999999999999987543 358
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 67999998765 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011234579999999999876 678889999999999999999999998876
Q ss_pred HHHHHH
Q 002356 903 RQKTFA 908 (931)
Q Consensus 903 ~~~~~~ 908 (931)
....+.
T Consensus 213 ~~~~~~ 218 (338)
T cd07859 213 VVHQLD 218 (338)
T ss_pred hHHHHH
Confidence 554443
No 109
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.8e-33 Score=305.44 Aligned_cols=215 Identities=26% Similarity=0.440 Sum_probs=179.8
Q ss_pred CCccccccccccCcEEEEEEEEec-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc---CCCCccceeEEEE-----
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 739 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----- 739 (931)
++|++.+.||+|+||.||+|.+.. +++.+|+|.+...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999854 4688999998754322 22233455677777665 6999999999885
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
....+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 346789999999 5699999987655568999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43210 11234568999999999998889999999999999999999999999
Q ss_pred CCCHHHHHHHHHcC
Q 002356 900 GKTRQKTFANILHK 913 (931)
Q Consensus 900 ~~~~~~~~~~I~~~ 913 (931)
+.+..+.+.+|.+.
T Consensus 211 ~~~~~~~~~~i~~~ 224 (290)
T cd07862 211 GSSDVDQLGKILDV 224 (290)
T ss_pred CCCHHHHHHHHHHH
Confidence 99888888888753
No 110
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.6e-33 Score=303.48 Aligned_cols=225 Identities=32% Similarity=0.581 Sum_probs=187.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|+..+.||.|+||.||++.+..+++.||+|.+.+...........+.+|+.+|+.++|+||+.+++++..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47788999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999988542110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA- 908 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~- 908 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 01123468999999999998889999999999999999999999998876544333
Q ss_pred ---HHHcCCCCCCCCCc
Q 002356 909 ---NILHKDLKFPSSTP 922 (931)
Q Consensus 909 ---~I~~~~~~~p~~~~ 922 (931)
.+..+...++...+
T Consensus 213 ~~~~~~~~~~~~~~~~~ 229 (285)
T cd05632 213 VDRRVLETEEVYSAKFS 229 (285)
T ss_pred HHHhhhccccccCccCC
Confidence 33444445554433
No 111
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.5e-33 Score=302.72 Aligned_cols=214 Identities=33% Similarity=0.595 Sum_probs=179.2
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||+|+||.||++.+..+++.||+|.+.+...........+..|+++++.++||||+++++++....++|+||||+.|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999999765443333344556799999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------ 148 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------ 148 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC------------
Confidence 99887655556899999999999999999999999999999999999999999999999998543210
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHc
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT----RQKTFANILH 912 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~~~~~~~I~~ 912 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||.... ..++...+..
T Consensus 149 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 149 ----------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred ----------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 01123458999999999998889999999999999999999999997642 2345555555
Q ss_pred CCCCCC
Q 002356 913 KDLKFP 918 (931)
Q Consensus 913 ~~~~~p 918 (931)
+.+.++
T Consensus 213 ~~~~~~ 218 (277)
T cd05607 213 DEVKFE 218 (277)
T ss_pred cccccc
Confidence 554443
No 112
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=313.11 Aligned_cols=216 Identities=27% Similarity=0.407 Sum_probs=194.2
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|.-++.||.|+||.||-+++..|...||||.+..+..........+..|+..|++|.|||++.+.++|-.+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 48889999999999999999999999999999988777778889999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|| -||-.+++.-. .+.+-+-++..|+.+.+.||+|||+.+.||||||..|||++..|.|||+|||.|...
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-------- 176 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM-------- 176 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc--------
Confidence 99 77888888754 356999999999999999999999999999999999999999999999999998553
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
...++|+|||.|||||++. .+.|+-++||||||++..||.-.+||+-..+....
T Consensus 177 -----------------------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 177 -----------------------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred -----------------------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 2356899999999999984 45788899999999999999999999988888888
Q ss_pred HHHHHcCC-CCCC
Q 002356 907 FANILHKD-LKFP 918 (931)
Q Consensus 907 ~~~I~~~~-~~~p 918 (931)
+..|.... ++++
T Consensus 234 LYHIAQNesPtLq 246 (948)
T KOG0577|consen 234 LYHIAQNESPTLQ 246 (948)
T ss_pred HHHHHhcCCCCCC
Confidence 88886543 3443
No 113
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-32 Score=298.57 Aligned_cols=231 Identities=19% Similarity=0.264 Sum_probs=190.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
+...+|++.+.||+|+||.||++.+. ..+..+|+|.++... .......+.+|+.+++.++||||+++++++...+
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 34568999999999999999999875 346789999987642 2334467889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..++||||+.+++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997643 358999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.. .........+++.|+|||.+.+..++.++|||||||++|++++ |..||.+.
T Consensus 159 ~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SE--------------------------AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred cc--------------------------chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 00 0001112345678999999999999999999999999999775 99999999
Q ss_pred CHHHHHHHHHcCC-CCCCCCCcCCh
Q 002356 902 TRQKTFANILHKD-LKFPSSTPRSK 925 (931)
Q Consensus 902 ~~~~~~~~I~~~~-~~~p~~~~~~~ 925 (931)
+..++++.+.++. +..|...|...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd05064 213 SGQDVIKAVEDGFRLPAPRNCPNLL 237 (266)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCHHH
Confidence 9888888887663 35555554433
No 114
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=329.22 Aligned_cols=239 Identities=28% Similarity=0.398 Sum_probs=194.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEE-EEe--
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQT-- 740 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~~-- 740 (931)
.+...+++|.+.|.+|||+.||+|++...+..||+|.+-.. +......+.+|+++|++| +|+|||.+++. ...
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence 35566789999999999999999999888899999987543 667788899999999999 59999999993 221
Q ss_pred ----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEEEEe
Q 002356 741 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTD 814 (931)
Q Consensus 741 ----~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vkL~D 814 (931)
.-.++|+||||.||+|-+++..+....|++.++..|+.++++||.+||..+ |||||||-+||||+.+|+.||||
T Consensus 110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCc
Confidence 134689999999999999999765566999999999999999999999998 99999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh---cCCCCCChhhHHHHHHHHHHH
Q 002356 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~---~~~~~~~~~DiwSlGvil~el 891 (931)
||.++-....+. ...+ .. -....-....|+.|.|||++ .+.+.+.|+|||+|||+||-|
T Consensus 190 FGSatt~~~~~~----~~~e----------~~----~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 190 FGSATTKILSPT----SAQE----------VN----YVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred ccccccccCCCc----cHHH----------HH----HHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 999854321110 0000 00 00111133579999999987 456788999999999999999
Q ss_pred HcCCCCCCCCCHHHHHHHHHcCCCCCCCCCcCChhhh
Q 002356 892 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPRSKEQI 928 (931)
Q Consensus 892 l~G~~Pf~~~~~~~~~~~I~~~~~~~p~~~~~~~~~~ 928 (931)
++.+.||..... -+|+++++.||+..+.+....
T Consensus 252 Cy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~ 284 (738)
T KOG1989|consen 252 CYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLK 284 (738)
T ss_pred HHhCCCcCcCcc----eeEEeccccCCCCccHHHHHH
Confidence 999999986633 578999999999877765543
No 115
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-32 Score=301.79 Aligned_cols=205 Identities=36% Similarity=0.636 Sum_probs=179.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++.+...+..|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47788999999999999999999999999999876544444445567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.|++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999987654456999999999999999999999999999999999999999999999999988432100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~ 205 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 01123468999999999998889999999999999999999999998643
No 116
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-32 Score=330.84 Aligned_cols=228 Identities=27% Similarity=0.373 Sum_probs=183.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|++............++.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999997654444555677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 749 DYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999986421 1235567788899999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
............ ..................+||+.|||||++.+..++.++|||||||++|+|++|..||.
T Consensus 162 ~i~~~~~~~~~l---------~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDI---------DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred eccccccccccc---------ccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 542111000000 00000000111122335679999999999999999999999999999999999999998
Q ss_pred CCCHHH
Q 002356 900 GKTRQK 905 (931)
Q Consensus 900 ~~~~~~ 905 (931)
..+...
T Consensus 233 ~~~~~k 238 (932)
T PRK13184 233 RKKGRK 238 (932)
T ss_pred Ccchhh
Confidence 755443
No 117
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-34 Score=315.03 Aligned_cols=229 Identities=29% Similarity=0.447 Sum_probs=198.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+.|.++..||.|+||+||++..+.++...|.|++... .......+.-||+||..++||+||+|++.|..++.+||+
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 35688999999999999999999999999999988543 456778899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
.|||.||-...++-.- +..+++.++..+++|+|.||.|||+++|||||||..|||++.+|.++|+|||++.....
T Consensus 108 iEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---- 182 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---- 182 (1187)
T ss_pred EeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh----
Confidence 9999999888776554 45699999999999999999999999999999999999999999999999999843210
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
......+++|||+|||||++.+ .+|++++||||||++|.+|..+.+|-...+
T Consensus 183 -----------------------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln 239 (1187)
T KOG0579|consen 183 -----------------------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN 239 (1187)
T ss_pred -----------------------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc
Confidence 0112347899999999999854 578999999999999999999999999999
Q ss_pred HHHHHHHHHcCC---CCCCCCCcCChhh
Q 002356 903 RQKTFANILHKD---LKFPSSTPRSKEQ 927 (931)
Q Consensus 903 ~~~~~~~I~~~~---~~~p~~~~~~~~~ 927 (931)
+..++-+|.+.. +--|+-|.++...
T Consensus 240 pMRVllKiaKSePPTLlqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 240 PMRVLLKIAKSEPPTLLQPSHWSRSFSD 267 (1187)
T ss_pred hHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence 999999998743 4667777766543
No 118
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=299.29 Aligned_cols=214 Identities=20% Similarity=0.252 Sum_probs=182.5
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe----CCeEEEEEec
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 750 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lVmE~ 750 (931)
..||+|+++.||++.. +++.||+|.+.+...........+.+|+.+|++++||||+++++++.. ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5689999999999988 789999999987644444456778899999999999999999999876 4578999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
++||+|.+++... +.++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999865 3588899999999999999999985 9999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+++
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 113468899999999976 67899999999999999999999999999999999
Q ss_pred HHHHcCCC--CCCCCCc
Q 002356 908 ANILHKDL--KFPSSTP 922 (931)
Q Consensus 908 ~~I~~~~~--~~p~~~~ 922 (931)
..+..+.. .+|...+
T Consensus 232 ~~i~~~~~~~~~~~~~~ 248 (283)
T PHA02988 232 DLIINKNNSLKLPLDCP 248 (283)
T ss_pred HHHHhcCCCCCCCCcCc
Confidence 98876544 4443333
No 119
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-32 Score=306.44 Aligned_cols=209 Identities=27% Similarity=0.452 Sum_probs=182.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||++++++|...+.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45679999999999999999999999999999999887542 2344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+||||+.+++|.+++... ..+++..+..++.|++.||.|||++ +|+|+||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-
Confidence 999999999999999764 3489999999999999999999985 799999999999999999999999999853311
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112346899999999999888999999999999999999999999876655
Q ss_pred HHH
Q 002356 905 KTF 907 (931)
Q Consensus 905 ~~~ 907 (931)
++.
T Consensus 209 ~~~ 211 (333)
T cd06650 209 ELE 211 (333)
T ss_pred HHH
Confidence 443
No 120
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-32 Score=311.24 Aligned_cols=210 Identities=26% Similarity=0.463 Sum_probs=177.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
..++|++.+.||+|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3579999999999999999999999999999999987642 2344556778999999999999999999998644
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..+|+||||+. ++|...+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 98 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 98 FQDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred cceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 35799999995 567666643 288899999999999999999999999999999999999999999999999853
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 173 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 173 ACTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred cccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 2110 111234689999999999999999999999999999999999999998
Q ss_pred CCHHHHHHHH
Q 002356 901 KTRQKTFANI 910 (931)
Q Consensus 901 ~~~~~~~~~I 910 (931)
.+..+.+..+
T Consensus 225 ~~~~~~~~~~ 234 (359)
T cd07876 225 TDHIDQWNKV 234 (359)
T ss_pred CCHHHHHHHH
Confidence 7765544433
No 121
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.7e-32 Score=298.28 Aligned_cols=230 Identities=25% Similarity=0.412 Sum_probs=192.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..++|++.+.||+|+||.||++.+...+ ..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 4568999999999999999999986654 789999886542 334556788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~ 807 (931)
...|++|||+++++|.+++..... ..++...+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 999999999999999999976421 347889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHH
Q 002356 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (931)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvi 887 (931)
+.++|+|||++....... .........+++.|+|||.+....++.++|||||||+
T Consensus 161 ~~~~L~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i 215 (283)
T cd05048 161 LTVKISDFGLSRDIYSAD-------------------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV 215 (283)
T ss_pred CcEEECCCcceeeccccc-------------------------cccccCCCcccccccCHHHhccCcCchhhhHHHHHHH
Confidence 999999999985432110 0111223457889999999988889999999999999
Q ss_pred HHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCcC
Q 002356 888 LYEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTPR 923 (931)
Q Consensus 888 l~ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~~ 923 (931)
+|+|++ |..||.+.+..+++..|.++.. ..|...+.
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (283)
T cd05048 216 LWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPA 253 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCH
Confidence 999997 9999999999999988887654 44554443
No 122
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.2e-32 Score=292.95 Aligned_cols=222 Identities=27% Similarity=0.504 Sum_probs=193.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+.+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999986532 23456778889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655566899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+....+..
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 0112245689999999999988899999999999999999999999999888888888
Q ss_pred HHcCCCC-CCCC
Q 002356 910 ILHKDLK-FPSS 920 (931)
Q Consensus 910 I~~~~~~-~p~~ 920 (931)
+.++.+. +|..
T Consensus 212 ~~~~~~~~~~~~ 223 (255)
T cd08219 212 VCQGSYKPLPSH 223 (255)
T ss_pred HhcCCCCCCCcc
Confidence 8777653 4443
No 123
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=317.30 Aligned_cols=214 Identities=33% Similarity=0.474 Sum_probs=180.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------Ce
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------TH 743 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~ 743 (931)
-|..-+.||.|+||.||+++++.+|+.+|||.+++.. .....++..+|+++|++|+|||||+++++-++. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4566688999999999999999999999999988743 455678889999999999999999999986543 35
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec--CC--cEEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~--~g--~vkL~DFG~a 818 (931)
..+|||||.||||+..+.+-. ...+++.++..++..+..||.|||++||+||||||.||++.. +| .-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 689999999999999998532 245999999999999999999999999999999999999953 34 3699999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+..... ....+++||+.|++||++.. ..|+..+|.|||||++|+++||..|
T Consensus 172 rel~d~----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDDN----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCC----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 765321 23457899999999999984 8888899999999999999999999
Q ss_pred CCCC----CHHHHHHHHHcC
Q 002356 898 FRGK----TRQKTFANILHK 913 (931)
Q Consensus 898 f~~~----~~~~~~~~I~~~ 913 (931)
|-.. +..++...++.+
T Consensus 224 F~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 224 FIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred CCcCCCccccchhhhhhhcc
Confidence 9642 334566666544
No 124
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.2e-32 Score=294.56 Aligned_cols=227 Identities=23% Similarity=0.343 Sum_probs=192.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+...+|.+.+.||+|+||.||++.+..++..+|+|.+... ......+.+|+.+++.++||||+++++++...+.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4566899999999999999999999999999999998653 234567888999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
++|||+++++|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 159 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 --------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred --------------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 001112234678999999998889999999999999999998 99999998888
Q ss_pred HHHHHHHcC-CCCCCCCCc
Q 002356 905 KTFANILHK-DLKFPSSTP 922 (931)
Q Consensus 905 ~~~~~I~~~-~~~~p~~~~ 922 (931)
+.+..+..+ ...+|...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (263)
T cd05052 213 QVYELLEKGYRMERPEGCP 231 (263)
T ss_pred HHHHHHHCCCCCCCCCCCC
Confidence 888887765 345554443
No 125
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.9e-32 Score=301.59 Aligned_cols=217 Identities=25% Similarity=0.371 Sum_probs=179.9
Q ss_pred cCCCccccccccccCcEEEEEEEEec----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~----------------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (931)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+|..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 45689999999999999999998632 34579999987542 3345567889999999999999
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPT-----------------KVLKEDAVRFYAAEVVVALEYLHCQGII 793 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~-----------------~~l~~~~~~~i~~qil~aL~~LH~~gIi 793 (931)
|+++++++...+..++||||+.+++|.+++..... ..++...+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 99999999999999999999999999999865311 2367788999999999999999999999
Q ss_pred cCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC
Q 002356 794 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (931)
Q Consensus 794 HrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~ 873 (931)
||||||+|||++.++.+||+|||++...... ..........+++.|+|||++...
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~-------------------------~~~~~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAG-------------------------DYYRIQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccC-------------------------ceeEecCcCCCCccccCHHHHhcC
Confidence 9999999999999999999999998543210 001122334568899999999888
Q ss_pred CCCChhhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHHH
Q 002356 874 GHTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANI 910 (931)
Q Consensus 874 ~~~~~~DiwSlGvil~ell~--G~~Pf~~~~~~~~~~~I 910 (931)
.++.++|||||||++|+|++ |..||...+..+++..+
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~ 254 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA 254 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence 89999999999999999986 67899887777666554
No 126
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-34 Score=285.31 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=198.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE-----
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----- 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 739 (931)
.++.++|.+.+.||.|||+.||+|+...++..||+|.+... ..+..+...+|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 36788999999999999999999999999999999998765 3567778889999999999999999987653
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEEEEec
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vkL~DF 815 (931)
.....||++.|...|+|.+.+... ++..+++..+..|+.+|++||++||+.. ++||||||.|||+++++..+|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 334589999999999999998753 3457999999999999999999999998 999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC---CCChhhHHHHHHHHHHHH
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEML 892 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell 892 (931)
|.++...-.-. ....+........-..|..|.|||.+.... .+.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~------------------~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIE------------------GSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEee------------------chHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 99865321000 000011111222345788999999996544 467999999999999999
Q ss_pred cCCCCCCC--CCHHHHHHHHHcCCCCCCCCCcCChhhhhc
Q 002356 893 YGYTPFRG--KTRQKTFANILHKDLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 893 ~G~~Pf~~--~~~~~~~~~I~~~~~~~p~~~~~~~~~~~~ 930 (931)
+|..||.. .....+.-++.++++.||...+.|...+.|
T Consensus 236 f~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~l 275 (302)
T KOG2345|consen 236 FGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQL 275 (302)
T ss_pred HcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHH
Confidence 99999963 233345567788899999998887766543
No 127
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=288.35 Aligned_cols=217 Identities=25% Similarity=0.418 Sum_probs=186.1
Q ss_pred CCCcccc-ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhcCCCCccceeEEEEe----C
Q 002356 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (931)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~ 741 (931)
.++|++- +.||-|-.|+|..|.++.|+..||+|++... ....+|+++- ..-.|||||+++++|.+ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4667765 4799999999999999999999999987543 3455677763 34489999999999864 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC---CcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~---g~vkL~DFG~a 818 (931)
.++.+|||.++||.|++.+..++...|++.++-.|++||..|+.|||+.+|.||||||+|+|...+ ..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 678999999999999999999888899999999999999999999999999999999999999754 46999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
+.... .....+-+-||.|.|||++-..+|+...|+|||||+||-|++|.+||
T Consensus 212 K~t~~----------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQE----------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCC----------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 65321 12234567899999999999999999999999999999999999999
Q ss_pred CCCCH----HHHHHHHHcCCCCCCCC
Q 002356 899 RGKTR----QKTFANILHKDLKFPSS 920 (931)
Q Consensus 899 ~~~~~----~~~~~~I~~~~~~~p~~ 920 (931)
..... ..+-.+|..|.+.||..
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCCh
Confidence 86543 57788999999999974
No 128
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=295.47 Aligned_cols=208 Identities=27% Similarity=0.470 Sum_probs=187.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
-|.++..||+|+||.||++.++.+|..+|+|.+.-. ...+.+..|+.||+++++|+||++|+.|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999987654 467889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
||.-|++.+++..+ .+.+++.++..+++..++||+|||...=||||||..|||++.+|..||+|||.|...
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL-------- 179 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL-------- 179 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchh--------
Confidence 99999999999754 467999999999999999999999999999999999999999999999999998432
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.+.....++..|||-|||||++...+|+.++||||||++-.||..|++||.+-.+...+..
T Consensus 180 -------------------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 180 -------------------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred -------------------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 2233445688999999999999999999999999999999999999999998777655544
Q ss_pred H
Q 002356 910 I 910 (931)
Q Consensus 910 I 910 (931)
|
T Consensus 241 I 241 (502)
T KOG0574|consen 241 I 241 (502)
T ss_pred c
Confidence 4
No 129
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-32 Score=317.97 Aligned_cols=210 Identities=25% Similarity=0.403 Sum_probs=173.9
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
...+|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+|+.++||||++++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 3468999999999999999999999999999999885431 2234699999999999999999887432
Q ss_pred ---CeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEec
Q 002356 742 ---THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDF 815 (931)
Q Consensus 742 ---~~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DF 815 (931)
.++++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+||
T Consensus 137 ~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 137 EKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred CCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 35789999995 578777653 2335699999999999999999999999999999999999998665 7999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G 894 (931)
|+|...... .......||+.|+|||++.+. .++.++|||||||+||+|++|
T Consensus 216 Gla~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG 267 (440)
T PTZ00036 216 GSAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267 (440)
T ss_pred ccchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 999543210 112245789999999998764 688999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHc
Q 002356 895 YTPFRGKTRQKTFANILH 912 (931)
Q Consensus 895 ~~Pf~~~~~~~~~~~I~~ 912 (931)
.+||.+.+..+.+.+|.+
T Consensus 268 ~~pf~~~~~~~~~~~i~~ 285 (440)
T PTZ00036 268 YPIFSGQSSVDQLVRIIQ 285 (440)
T ss_pred CCCCCCCChHHHHHHHHH
Confidence 999999888777776654
No 130
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.1e-32 Score=311.71 Aligned_cols=213 Identities=27% Similarity=0.418 Sum_probs=179.9
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----eE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (931)
+|++.+.||+|+||.||++.+..+++.||+|.+... .........+.+|+.+|+.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478899999999999999999999999999988653 223344567889999999999999999999998776 88
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+ +++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999999 56888887654 45999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. ........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 E--------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred c--------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 0 0111234688999999999874 478899999999999999999999999888
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
.+.+..|.+
T Consensus 211 ~~~~~~i~~ 219 (372)
T cd07853 211 IQQLDLITD 219 (372)
T ss_pred HHHHHHHHH
Confidence 777766643
No 131
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-32 Score=309.90 Aligned_cols=212 Identities=25% Similarity=0.454 Sum_probs=181.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
..++|++.+.||+|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+++.++||||+.+++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3579999999999999999999999999999999987542 2334456778899999999999999999987543
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..+|+||||+ +++|...+.. .++...++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 101 ~~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 101 FQDVYIVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred cCeEEEEEeCC-CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 4679999999 5578777753 278899999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 176 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 176 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred cCCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 3210 011235689999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+.+++.
T Consensus 228 ~~~~~~~~~~~~ 239 (364)
T cd07875 228 TDHIDQWNKVIE 239 (364)
T ss_pred CCHHHHHHHHHH
Confidence 888877777765
No 132
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.9e-32 Score=312.00 Aligned_cols=223 Identities=24% Similarity=0.363 Sum_probs=182.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (931)
.+..++|++.+.||+|+||.||++.+..+ +..||+|.+.... .......+.+|+.+++.+ +|+||+++++++
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 35566899999999999999999987544 3579999987542 233456788999999999 899999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~------------------------------------------------------ 764 (931)
...+.+|+|||||.+|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999986421
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 765 --------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 765 --------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~---- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----
Confidence 12478889999999999999999999999999999999999999999999999854321100
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~ 909 (931)
........+++.|||||++....++.++|||||||++|+|++ |+.||........+.+
T Consensus 268 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~ 326 (374)
T cd05106 268 ---------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK 326 (374)
T ss_pred ---------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence 011122345678999999998889999999999999999997 9999987666555555
Q ss_pred HHcCC
Q 002356 910 ILHKD 914 (931)
Q Consensus 910 I~~~~ 914 (931)
+....
T Consensus 327 ~~~~~ 331 (374)
T cd05106 327 MVKRG 331 (374)
T ss_pred HHHcc
Confidence 55443
No 133
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.2e-32 Score=309.40 Aligned_cols=201 Identities=29% Similarity=0.461 Sum_probs=170.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
....++|++++.||.|+||.||++.+..+++.||+|++.... .......+.+|+.+++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 345678999999999999999999999999999999986542 334456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+.+++|... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999999998643 23567888899999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
........||+.|+|||++.. ...+.++|||||||++|+|++|+.||.
T Consensus 222 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 222 ---------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred ---------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 111234579999999998743 233468999999999999999999997
Q ss_pred C
Q 002356 900 G 900 (931)
Q Consensus 900 ~ 900 (931)
.
T Consensus 275 ~ 275 (353)
T PLN00034 275 V 275 (353)
T ss_pred C
Confidence 4
No 134
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.3e-32 Score=297.80 Aligned_cols=239 Identities=39% Similarity=0.696 Sum_probs=197.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++++...+++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999988765444555677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999765 348999999999999999999999999999999999999999999999999985421110000
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
..... .. ............|++.|+|||.+....++.++|+|||||++|+|++|..||.+.+..+++.
T Consensus 159 ~~~~~-~~-----------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEGH-IE-----------KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred ccccc-cc-----------cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 00000 00 0000011223568899999999988889999999999999999999999999998889999
Q ss_pred HHHcCCCCCCCCC
Q 002356 909 NILHKDLKFPSST 921 (931)
Q Consensus 909 ~I~~~~~~~p~~~ 921 (931)
.+..+.+.+|...
T Consensus 227 ~~~~~~~~~~~~~ 239 (305)
T cd05609 227 QVISDDIEWPEGD 239 (305)
T ss_pred HHHhcccCCCCcc
Confidence 9888877776653
No 135
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1e-31 Score=288.71 Aligned_cols=218 Identities=29% Similarity=0.487 Sum_probs=191.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|.+.+.||+|++|.||++.+..++..|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 48889999999999999999999999999999875433 34456778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|++|++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~----- 154 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN----- 154 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-----
Confidence 999999999998764566999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+..+...+
T Consensus 155 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 155 ----------------------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred ----------------------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111234688999999999988899999999999999999999999999888888888
Q ss_pred HHcCCC
Q 002356 910 ILHKDL 915 (931)
Q Consensus 910 I~~~~~ 915 (931)
+..+.+
T Consensus 213 ~~~~~~ 218 (256)
T cd08529 213 IIRGVF 218 (256)
T ss_pred HHcCCC
Confidence 887654
No 136
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.7e-32 Score=299.07 Aligned_cols=213 Identities=29% Similarity=0.468 Sum_probs=177.3
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc---CCCCccceeEEEEe-----C
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 741 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~-----~ 741 (931)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998754221 12223345677766655 79999999998764 3
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..++++|||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999995 58999887755556899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 210 0112346899999999999888999999999999999999999999988
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+..+.+.++..
T Consensus 211 ~~~~~~~~~~~ 221 (288)
T cd07863 211 SEADQLGKIFD 221 (288)
T ss_pred CHHHHHHHHHH
Confidence 88777776654
No 137
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=308.90 Aligned_cols=218 Identities=28% Similarity=0.479 Sum_probs=184.2
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
|++..+...-+..||+|+-|.||+++. .++.||||.++. .-..+|+-|++|+||||+.+.++|.....
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCce
Confidence 455666667788999999999999998 567899996532 22358899999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|||||||..|.|+.+|+.. +.++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++....
T Consensus 187 yCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 99999999999999999874 4589999999999999999999999999999999999999999999999998855431
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. ...-+|+||..|||||++...+.+.++|||||||+||||+||..||.+-+.
T Consensus 265 ~----------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds 316 (904)
T KOG4721|consen 265 K----------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS 316 (904)
T ss_pred h----------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch
Confidence 1 123478999999999999999999999999999999999999999987666
Q ss_pred HHHHHHHHcCC--CCCCCCCcC
Q 002356 904 QKTFANILHKD--LKFPSSTPR 923 (931)
Q Consensus 904 ~~~~~~I~~~~--~~~p~~~~~ 923 (931)
..++.-+=... +..|+.+|-
T Consensus 317 sAIIwGVGsNsL~LpvPstcP~ 338 (904)
T KOG4721|consen 317 SAIIWGVGSNSLHLPVPSTCPD 338 (904)
T ss_pred heeEEeccCCcccccCcccCch
Confidence 55554443332 455565553
No 138
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.5e-32 Score=307.92 Aligned_cols=211 Identities=25% Similarity=0.449 Sum_probs=178.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
..++|++.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4579999999999999999999999999999999987542 2334556778899999999999999999988643
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..+|+||||++ ++|.+.+.. .++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999995 577777654 388899999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 169 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred CCCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3210 111235689999999999999999999999999999999999999998
Q ss_pred CCHHHHHHHHH
Q 002356 901 KTRQKTFANIL 911 (931)
Q Consensus 901 ~~~~~~~~~I~ 911 (931)
.+..+.+..+.
T Consensus 221 ~~~~~~~~~~~ 231 (355)
T cd07874 221 RDYIDQWNKVI 231 (355)
T ss_pred CCHHHHHHHHH
Confidence 87666555444
No 139
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.3e-32 Score=300.37 Aligned_cols=215 Identities=23% Similarity=0.391 Sum_probs=180.9
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.+.+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++||||+++++++...+..|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35689999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+. ++|.+++.... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 v~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 82 VFEYLD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred EEeCCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 999995 58888886543 458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 212 (309)
T cd07872 159 --------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212 (309)
T ss_pred --------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 11123457899999999865 457889999999999999999999999888776
Q ss_pred HHHHHHc
Q 002356 906 TFANILH 912 (931)
Q Consensus 906 ~~~~I~~ 912 (931)
.+..+.+
T Consensus 213 ~~~~~~~ 219 (309)
T cd07872 213 ELHLIFR 219 (309)
T ss_pred HHHHHHH
Confidence 6665543
No 140
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.5e-32 Score=318.24 Aligned_cols=215 Identities=22% Similarity=0.369 Sum_probs=177.2
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC------CCccceeEEEEe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~~ 740 (931)
..++|++++.||+|+||.||++.+..+++.||||++.... ........|+.+++.+.| ++++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 4578999999999999999999999999999999986421 223345567777777654 458888888875
Q ss_pred C-CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC----------
Q 002356 741 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 808 (931)
Q Consensus 741 ~-~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g---------- 808 (931)
. .++|+||+++ |++|.+++... ..+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999999 88999988764 359999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 809 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 809 ------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999874211 112346799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 883 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 883 SlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
||||++|||++|++||.+.+..+.+..|.+....+|
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p 365 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP 365 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence 999999999999999999888777776655433333
No 141
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.9e-32 Score=327.43 Aligned_cols=224 Identities=25% Similarity=0.438 Sum_probs=181.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 743 (931)
...++|.+++.||.|+||.||+|.+..++..||+|++..... .......+..|+.+|+.|+|||||+++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 456799999999999999999999999999999999876533 33455778899999999999999999998854 467
Q ss_pred EEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCccCCCCCCcEEEecC-------
Q 002356 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQGN------- 807 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-------gIiHrDIKP~NIll~~~------- 807 (931)
+|||||||.+++|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999998753 224599999999999999999999995 49999999999999642
Q ss_pred ----------CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCC
Q 002356 808 ----------GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 875 (931)
Q Consensus 808 ----------g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~ 875 (931)
+.+||+|||++...... .......||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCCC
Confidence 34899999998543210 11224579999999999864 457
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 876 ~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
+.++|||||||+||+|++|..||...+....+..++.....+|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp 263 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP 263 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC
Confidence 8899999999999999999999987655444444444333333
No 142
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.7e-32 Score=307.30 Aligned_cols=210 Identities=28% Similarity=0.452 Sum_probs=178.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|++++.||.|+||.||++.+..+++.||+|.+.+... .......+.+|+.+|+.++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4789999999999999999999999999999999875421 223445677899999999999999999987533
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...|++|+++ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999998 8899988764 34999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 21 1123568999999999976 5678899999999999999999999998
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+..+.+..+.+
T Consensus 219 ~~~~~~~~~~~~ 230 (343)
T cd07878 219 NDYIDQLKRIME 230 (343)
T ss_pred CCHHHHHHHHHH
Confidence 877766666543
No 143
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.2e-32 Score=308.00 Aligned_cols=221 Identities=23% Similarity=0.352 Sum_probs=180.5
Q ss_pred cccCCCccccccccccCcEEEEEEEE-----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~-----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (931)
.+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.+|+.+ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 45566899999999999999999974 3457789999986542 233456788999999999 899999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~------------------------------------------------------ 764 (931)
...+..++|||||+||+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986432
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 765 -------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 765 -------------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 1247788899999999999999999999999999999999999999999999986432110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
. ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 269 ~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~ 323 (375)
T cd05104 269 N-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD 323 (375)
T ss_pred c-------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch
Confidence 0 011122345678999999999999999999999999999997 99999876554
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
..+.++++
T Consensus 324 ~~~~~~~~ 331 (375)
T cd05104 324 SKFYKMIK 331 (375)
T ss_pred HHHHHHHH
Confidence 44444444
No 144
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.8e-32 Score=290.22 Aligned_cols=218 Identities=24% Similarity=0.387 Sum_probs=186.5
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++++.||+|+||.||++.+. ++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 356789999999999999999999864 56679999876532 2356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||+.+++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999998765566899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
. ........++..|+|||++....++.++|||||||++|+|++ |..||.+...
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 E--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred c--------------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 0 001112346778999999988888999999999999999998 9999998888
Q ss_pred HHHHHHHHcC
Q 002356 904 QKTFANILHK 913 (931)
Q Consensus 904 ~~~~~~I~~~ 913 (931)
.+....+..+
T Consensus 211 ~~~~~~~~~~ 220 (261)
T cd05072 211 SDVMSALQRG 220 (261)
T ss_pred HHHHHHHHcC
Confidence 8888777655
No 145
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-31 Score=294.03 Aligned_cols=227 Identities=22% Similarity=0.343 Sum_probs=190.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
+..++|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34568999999999999999999862 34567999988653 33456678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~ 809 (931)
.+.+++||||+++++|.+++.... ...+++..+..++.||+.||+|||++|++||||||+||+++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999997542 124899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHH
Q 002356 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (931)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 889 (931)
++|+|||++....... .........+++.|+|||++.+..++.++|+|||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCc-------------------------eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 9999999985432110 001122344678999999999888999999999999999
Q ss_pred HHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCC
Q 002356 890 EMLY-GYTPFRGKTRQKTFANILHKDL-KFPSS 920 (931)
Q Consensus 890 ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~ 920 (931)
+|++ |.+||...+..+.+..+..+.+ ..|..
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~ 246 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT 246 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCC
Confidence 9998 9999999888889999988764 44433
No 146
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.8e-31 Score=287.23 Aligned_cols=218 Identities=27% Similarity=0.469 Sum_probs=188.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-CCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lVm 748 (931)
+|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|||++++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999865422 33445678889999999999999999988764 45689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~---- 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ---- 155 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc----
Confidence 9999999999998755556899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+......
T Consensus 156 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 156 -----------------------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred -----------------------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 011224568999999999999889999999999999999999999999888888877
Q ss_pred HHHcCCC
Q 002356 909 NILHKDL 915 (931)
Q Consensus 909 ~I~~~~~ 915 (931)
.+..+.+
T Consensus 213 ~~~~~~~ 219 (257)
T cd08223 213 RIIEGKL 219 (257)
T ss_pred HHHhcCC
Confidence 8777765
No 147
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.1e-31 Score=287.70 Aligned_cols=228 Identities=26% Similarity=0.405 Sum_probs=189.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+.|.+.+.||.|++|.||++.+..+++.||+|.+...... .......+.+|+.+++.++||||+++++++.....+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4699999999999999999999999999999998754322 12345678889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999999765 3489999999999999999999999999999999999999999999999999854321000
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00001234688899999999998899999999999999999999999988777666
Q ss_pred HHHHHcC--CCCCCCCCc
Q 002356 907 FANILHK--DLKFPSSTP 922 (931)
Q Consensus 907 ~~~I~~~--~~~~p~~~~ 922 (931)
+.++... ...+|...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~ 233 (263)
T cd06625 216 IFKIATQPTNPQLPSHVS 233 (263)
T ss_pred HHHHhccCCCCCCCccCC
Confidence 6666544 334554433
No 148
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-31 Score=292.65 Aligned_cols=225 Identities=21% Similarity=0.295 Sum_probs=190.2
Q ss_pred cCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..++|.+.+.||+|+||.||++.+.. +++.||+|.+.... .......+.+|+++|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 45689999999999999999998743 36789999987542 233457888999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q 002356 742 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~ 809 (931)
...++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997542 234788999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHH
Q 002356 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (931)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 889 (931)
++|+|||++....... .........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCc-------------------------ceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 9999999985432100 001122335678999999999999999999999999999
Q ss_pred HHHc-CCCCCCCCCHHHHHHHHHcCCCCCC
Q 002356 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFP 918 (931)
Q Consensus 890 ell~-G~~Pf~~~~~~~~~~~I~~~~~~~p 918 (931)
+|++ |..||.+.+..+....+.++.+..+
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 245 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR 245 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 9998 9999999888899999888776443
No 149
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=1.2e-32 Score=318.58 Aligned_cols=239 Identities=24% Similarity=0.390 Sum_probs=206.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+...+..+++.||+|+||+||+++... ....||||.++... +.....+|.+|+++|..|+|||||++++++.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 3566778889999999999999998743 35689999997652 3446788999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC--------CC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP--------TK----VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~--------~~----~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~ 807 (931)
.++.+|+|+|||..|+|.+||.... +. .++..+...|+.||+.|++||-++.+|||||...|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999997531 11 28889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHH
Q 002356 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (931)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvi 887 (931)
..|||+|||+++...... .++......-..+|||||.+...+|+.+|||||+||+
T Consensus 640 l~VKIsDfGLsRdiYssD-------------------------YYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSD-------------------------YYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eEEEecccccchhhhhhh-------------------------hhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 999999999997643211 1112222234679999999999999999999999999
Q ss_pred HHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcCChhhhhc
Q 002356 888 LYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPRSKEQIRF 930 (931)
Q Consensus 888 l~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~~~~~~~~ 930 (931)
|||+++ |+-||.+.+.+++++.|.+|+ +.-|.++|.+...||.
T Consensus 695 LWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~ 739 (774)
T KOG1026|consen 695 LWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLML 739 (774)
T ss_pred hhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHH
Confidence 999995 999999999999999999987 5999999999888874
No 150
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.98 E-value=1.7e-31 Score=291.27 Aligned_cols=230 Identities=17% Similarity=0.271 Sum_probs=187.9
Q ss_pred ccCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999998753 35689999886432 22344568899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEE
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPT--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~--------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL 812 (931)
....++||||+.+++|.+++..... ..++...+..++.|++.||.|||++|++|+||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999999875321 23577888999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHH
Q 002356 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 892 (931)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99999854321100 00111234678899999999888999999999999999999
Q ss_pred c-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCc
Q 002356 893 Y-GYTPFRGKTRQKTFANILHKDL-KFPSSTP 922 (931)
Q Consensus 893 ~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~ 922 (931)
+ |..||.+.+..+.+..+..+.+ .+|...+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCP 247 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCC
Confidence 8 7999999988888888877654 4444433
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=1.3e-31 Score=290.25 Aligned_cols=217 Identities=26% Similarity=0.439 Sum_probs=182.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.+.+.||.|+||.||++.+..+++.||+|.++... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence 3468999999999999999999999999999999987542 2334567789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06645 84 CMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-- 159 (267)
T ss_pred EEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--
Confidence 99999999999998765 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||.....
T Consensus 160 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~ 214 (267)
T cd06645 160 -------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP 214 (267)
T ss_pred -------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence 01122446899999999984 45578899999999999999999999976655
Q ss_pred HHHHHHHHcCCC
Q 002356 904 QKTFANILHKDL 915 (931)
Q Consensus 904 ~~~~~~I~~~~~ 915 (931)
......+....+
T Consensus 215 ~~~~~~~~~~~~ 226 (267)
T cd06645 215 MRALFLMTKSNF 226 (267)
T ss_pred hhhHHhhhccCC
Confidence 444444444443
No 152
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-32 Score=307.76 Aligned_cols=234 Identities=25% Similarity=0.381 Sum_probs=198.3
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEE
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 737 (931)
..|++..++-.+.+.||+|+||.||++..+..+ ..||+|..+............+.+|+++|++++|||||++|++
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 345677777788899999999999999986542 2389998876444567888999999999999999999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 738 ~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
......+++|||+|.||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccc
Confidence 9999999999999999999999998754 599999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCcccccccccccc-ccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GY 895 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~ 895 (931)
++... .. .... .-.-...|+|||.+....|++++|||||||++||+++ |.
T Consensus 309 s~~~~---~~-------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 309 SRAGS---QY-------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred ccCCc---ce-------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence 85432 00 0000 1123468999999999999999999999999999998 89
Q ss_pred CCCCCCCHHHHHHHHHcCC--CCCCCCCcCC
Q 002356 896 TPFRGKTRQKTFANILHKD--LKFPSSTPRS 924 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~~~--~~~p~~~~~~ 924 (931)
.||.+....++..+|.... ..+|...|..
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~ 391 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKE 391 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHH
Confidence 9999999999999996644 3555554443
No 153
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.98 E-value=1.4e-31 Score=296.30 Aligned_cols=218 Identities=24% Similarity=0.366 Sum_probs=182.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeE--EEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~--~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (931)
+..++|++.+.||+|+||.||+|.+..++.. +|+|.+... ........+.+|+.++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4567899999999999999999998777654 577766532 2334556788899999999 8999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
.+|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997542 12578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccch----------------------------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 999999999842110 0001112346789999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCCHHHHHHHHHcC
Q 002356 889 YEMLY-GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 889 ~ell~-G~~Pf~~~~~~~~~~~I~~~ 913 (931)
|+|++ |.+||.+.+..+.++.+..+
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC
Confidence 99998 99999988888888777655
No 154
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.98 E-value=2e-31 Score=287.95 Aligned_cols=217 Identities=26% Similarity=0.361 Sum_probs=185.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.+. +++.||+|.+..... ....+.+|+.+++.++||||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 45678999999999999999999874 457899999875422 2456788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999987654568999999999999999999999999999999999999999999999999986543100
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
........++..|+|||++.+..++.++|+|||||++|+|++ |+.||.+.+..
T Consensus 158 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 --------------------------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred --------------------------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 000111223468999999988889999999999999999998 99999998888
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
.++..+.++
T Consensus 212 ~~~~~~~~~ 220 (261)
T cd05068 212 EVLQQVDQG 220 (261)
T ss_pred HHHHHHHcC
Confidence 888877654
No 155
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=276.99 Aligned_cols=232 Identities=28% Similarity=0.438 Sum_probs=190.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
..++.+.+..||+|+.|.||+++.+.++...|||.+.+. .+.+..+++...+.++... ++|+||+++++|..+..++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 455677788999999999999999999999999999875 4567778888888887666 5999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+.||.| ...+..++++- .+.+++..+-.+..-++.||.||-.+ |||||||||+|||++..|.+||||||++.....
T Consensus 168 IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd- 244 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD- 244 (391)
T ss_pred HHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec-
Confidence 999999 55555555543 35699999999999999999999876 999999999999999999999999999854421
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCCCCCC-
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRG- 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~~- 900 (931)
+.......|.+.|||||.+.- ..|+-++||||||++|+||.||+.||.+
T Consensus 245 ---------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 245 ---------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred ---------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 122334579999999999953 4678899999999999999999999986
Q ss_pred CCHHHHHHHHHcCCC-CCCCCCcCChhhhhc
Q 002356 901 KTRQKTFANILHKDL-KFPSSTPRSKEQIRF 930 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~-~~p~~~~~~~~~~~~ 930 (931)
+...+++-+|++... .+|.....|...+.|
T Consensus 298 ~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f 328 (391)
T KOG0983|consen 298 KTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF 328 (391)
T ss_pred CccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence 566789999988543 455554455555544
No 156
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.98 E-value=3.9e-31 Score=284.53 Aligned_cols=219 Identities=28% Similarity=0.495 Sum_probs=192.5
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++++.||.|+||.||.+++..+++.+++|.+..... .......+.+|+.++++++|+||+++++++...+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999865432 33455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987645568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+..+.+..
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012245689999999999888888999999999999999999999999888888888
Q ss_pred HHcCCCC
Q 002356 910 ILHKDLK 916 (931)
Q Consensus 910 I~~~~~~ 916 (931)
+..+.+.
T Consensus 213 ~~~~~~~ 219 (256)
T cd08221 213 IVQGNYT 219 (256)
T ss_pred HHcCCCC
Confidence 8877654
No 157
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=2e-31 Score=291.67 Aligned_cols=230 Identities=22% Similarity=0.371 Sum_probs=189.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+..++|++.+.||+|+||.||++... .++..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 34568999999999999999999863 356789999987532 334456788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q 002356 742 THVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~---------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~ 806 (931)
...|+||||+.+++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 99999999999999999986431 124788899999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHH
Q 002356 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (931)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGv 886 (931)
++.+||+|||++........ ........++..|+|||++.+..++.++|+|||||
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05090 160 QLHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGV 214 (283)
T ss_pred CCcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHH
Confidence 99999999999865321100 01122344677899999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 887 LLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 887 il~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
++|+|++ |.+||.+.+..++.+.+..+. +..|...+
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (283)
T cd05090 215 VLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCP 252 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCC
Confidence 9999998 999999888888887777654 34454443
No 158
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.98 E-value=2.1e-31 Score=305.05 Aligned_cols=223 Identities=25% Similarity=0.327 Sum_probs=181.5
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 737 (931)
+.+..++|++.+.||.|+||.||++.+... +..||+|++.+.. .......+.+|+.+|+.++ ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 345678999999999999999999987433 3579999986542 2334567889999999996 9999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCC-----------------------------------------------------
Q 002356 738 FQTKTHVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 764 (931)
Q Consensus 738 ~~~~~~~~lVmE~~~ggsL~~~l~~~~----------------------------------------------------- 764 (931)
+...+.+|||||||++|+|.+++..+.
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999999999999886531
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEE
Q 002356 765 -----------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 803 (931)
Q Consensus 765 -----------------------------------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIl 803 (931)
...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124778888999999999999999999999999999999
Q ss_pred EecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHH
Q 002356 804 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 883 (931)
Q Consensus 804 l~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwS 883 (931)
++.++.+||+|||++........ ........+++.|+|||.+.+..++.++||||
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS 324 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWS 324 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHH
Confidence 99999999999999864321100 01122345778999999999888999999999
Q ss_pred HHHHHHHHHc-CCCCCCCCCHHHHH-HHHHcC
Q 002356 884 LGILLYEMLY-GYTPFRGKTRQKTF-ANILHK 913 (931)
Q Consensus 884 lGvil~ell~-G~~Pf~~~~~~~~~-~~I~~~ 913 (931)
|||++|+|++ |..||........+ ..+..+
T Consensus 325 lGvil~ellt~g~~P~~~~~~~~~~~~~~~~~ 356 (400)
T cd05105 325 YGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG 356 (400)
T ss_pred HHHHHHHHHHCCCCCCcccchhHHHHHHHhcC
Confidence 9999999996 99999876554444 444443
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=1.6e-31 Score=292.36 Aligned_cols=232 Identities=21% Similarity=0.348 Sum_probs=191.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
++..+|.+.+.||.|+||.||++.+..+ ++.+|+|.+.... .......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456799999999999999999988543 5789999987542 23345668889999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~ 806 (931)
....++++||+.+++|.+++.... ...++...+..++.|++.||.|||++||+||||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 999999999999999999985321 124788889999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHH
Q 002356 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (931)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGv 886 (931)
++.+||+|||++....... .........+++.|+|||.+....++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAAD-------------------------YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccch-------------------------heeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 9999999999986432110 011122345678999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCcCC
Q 002356 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTPRS 924 (931)
Q Consensus 887 il~ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~~~ 924 (931)
++|+|++ |..||.+.+..+++..+.++.. .+|...+..
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 254 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAW 254 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHH
Confidence 9999997 9999999999999999988764 455555443
No 160
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=2e-31 Score=287.20 Aligned_cols=223 Identities=25% Similarity=0.393 Sum_probs=185.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
..+|++.+.||+|+||.||++.+. ++..+|+|.+.+... ....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 457999999999999999999885 467899999865422 234577899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999997653 3589999999999999999999999999999999999999999999999999854321000
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~ 906 (931)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+.
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 00111224568999999998889999999999999999998 8999998888888
Q ss_pred HHHHHcC-CCCCCCCCc
Q 002356 907 FANILHK-DLKFPSSTP 922 (931)
Q Consensus 907 ~~~I~~~-~~~~p~~~~ 922 (931)
...+..+ .+..|...+
T Consensus 211 ~~~~~~~~~~~~~~~~~ 227 (256)
T cd05059 211 VESVSAGYRLYRPKLAP 227 (256)
T ss_pred HHHHHcCCcCCCCCCCC
Confidence 8888765 345554433
No 161
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.98 E-value=2.2e-31 Score=290.74 Aligned_cols=216 Identities=27% Similarity=0.480 Sum_probs=186.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++++.||.|+||.||++.+..++..+|+|.+... .......+..|+.+++.++||||+++++++.....+|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 45799999999999999999999889999999998643 345567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--- 156 (280)
T cd06611 81 IEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--- 156 (280)
T ss_pred eeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc---
Confidence 99999999999987642 45999999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
........|++.|+|||.+. ...++.++|+|||||++|+|++|++||.+.+
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 157 ------------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN 212 (280)
T ss_pred ------------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence 01122456899999999985 3446779999999999999999999999888
Q ss_pred HHHHHHHHHcCC
Q 002356 903 RQKTFANILHKD 914 (931)
Q Consensus 903 ~~~~~~~I~~~~ 914 (931)
..+.+.++..+.
T Consensus 213 ~~~~~~~~~~~~ 224 (280)
T cd06611 213 PMRVLLKILKSE 224 (280)
T ss_pred HHHHHHHHhcCC
Confidence 888777777654
No 162
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.98 E-value=2.5e-31 Score=286.28 Aligned_cols=216 Identities=25% Similarity=0.401 Sum_probs=183.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+.++|++.+.||+|+||.||++... .+..+|+|.+..... ....+.+|+.+|+.++||||+++++++...+.+++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 3467999999999999999999875 456799998765422 23567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+++++|.+++.... ..++...++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-
Confidence 999999999999987543 348999999999999999999999999999999999999999999999999885432100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~ 905 (931)
........++..|+|||++....++.++|+||||+++|+|++ |++||...+..+
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 155 -------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred -------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 001112235678999999988889999999999999999999 999999999999
Q ss_pred HHHHHHcCC
Q 002356 906 TFANILHKD 914 (931)
Q Consensus 906 ~~~~I~~~~ 914 (931)
.+..+.++.
T Consensus 210 ~~~~i~~~~ 218 (256)
T cd05114 210 VVEMISRGF 218 (256)
T ss_pred HHHHHHCCC
Confidence 999988764
No 163
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.98 E-value=1.6e-31 Score=288.45 Aligned_cols=215 Identities=26% Similarity=0.339 Sum_probs=187.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
..+|++.+.||.|+||.||++.+.. +..+|+|.+... .......+..|+.+++.++||||+++++++......++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 4579999999999999999999977 889999998764 233455688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 999999999999987655678999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~ 906 (931)
.......+++.|++||.+....++.++||||||+++|+|++ |+.||.+.+..++
T Consensus 159 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~ 213 (261)
T cd05148 159 -------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV 213 (261)
T ss_pred -------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 01112346778999999988889999999999999999998 8999999888888
Q ss_pred HHHHHcC
Q 002356 907 FANILHK 913 (931)
Q Consensus 907 ~~~I~~~ 913 (931)
+..+..+
T Consensus 214 ~~~~~~~ 220 (261)
T cd05148 214 YDQITAG 220 (261)
T ss_pred HHHHHhC
Confidence 8888754
No 164
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.98 E-value=2.1e-31 Score=290.11 Aligned_cols=231 Identities=19% Similarity=0.293 Sum_probs=191.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+..++|++.+.||.|+||.||++.+... +..||+|.+.... .......+.+|+.+|+.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 35677999999999999999999998654 3789999986542 2334456788999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
.....|+||||+.+++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999997532 12367889999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||+++...... .........++..|+|||.+....++.++|||||||++|++
T Consensus 160 l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCc-------------------------ccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 99999985432110 01112234577899999999888899999999999999999
Q ss_pred Hc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 892 LY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 892 l~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
++ |..||.+.+..+.++.+..+. ..+|...+
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCP 247 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCCCCCCCCCCC
Confidence 98 999999999888888887653 45665543
No 165
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.98 E-value=2.2e-31 Score=296.43 Aligned_cols=218 Identities=23% Similarity=0.328 Sum_probs=179.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+...+|++.+.||+|+||.||++.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 456789999999999999999999866655 4899988643 2234556788999999999999999999988764
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..++++||+.+|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999998653 34888999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 311100 00112234678999999999999999999999999999997 9999998
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
....++...+..
T Consensus 215 ~~~~~~~~~~~~ 226 (316)
T cd05108 215 IPASEISSILEK 226 (316)
T ss_pred CCHHHHHHHHhC
Confidence 877766544433
No 166
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.9e-31 Score=305.89 Aligned_cols=201 Identities=27% Similarity=0.445 Sum_probs=172.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~--~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
+...+|.+++.||.|+||.||++.... +++.+|+|.+... ....+|+.+|+.++||||+++++++.....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKST 160 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCE
Confidence 345689999999999999999997643 5678999987653 234579999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 161 ~~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 161 VCMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99999999 57899888543 4599999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
... ........||+.|+|||++....++.++|||||||++|+|++|+.||.+..
T Consensus 238 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 238 HPD-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccc-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 110 011234679999999999999999999999999999999999999997653
No 167
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=2.4e-31 Score=287.07 Aligned_cols=227 Identities=25% Similarity=0.387 Sum_probs=187.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||+|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.++||||+++++++. ....
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 355678999999999999999999875 556799999876432 2356889999999999999999999875 4568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|++|||+.+++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999999998755556899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
. ........++..|+|||++.+..++.++|+||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 156 E--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred c--------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112335678999999988889999999999999999998 9999999888
Q ss_pred HHHHHHHHcC-CCCCCCCCcC
Q 002356 904 QKTFANILHK-DLKFPSSTPR 923 (931)
Q Consensus 904 ~~~~~~I~~~-~~~~p~~~~~ 923 (931)
.+++..+..+ .+..|...+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~ 230 (260)
T cd05070 210 REVLEQVERGYRMPCPQDCPI 230 (260)
T ss_pred HHHHHHHHcCCCCCCCCcCCH
Confidence 8888888765 3445544433
No 168
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=2.5e-31 Score=287.60 Aligned_cols=216 Identities=25% Similarity=0.362 Sum_probs=181.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.+..+ ..+|+|.+.+... ....+.+|+.+++.++||||+++++++. ....|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 4567899999999999999999988665 4599999875322 2356788999999999999999998874 46689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999986544568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
........++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred --------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 011123346778999999988889999999999999999999 89999988888
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
+++..+..+
T Consensus 211 ~~~~~~~~~ 219 (262)
T cd05071 211 EVLDQVERG 219 (262)
T ss_pred HHHHHHhcC
Confidence 888777654
No 169
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=5.8e-31 Score=284.96 Aligned_cols=217 Identities=26% Similarity=0.374 Sum_probs=181.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 744 (931)
.+|++.+.||+|+||.||++.+..+++.||+|.+..... ........+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 579999999999999999999999999999998864321 223456778899999999999999999998876 3578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||++|++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001112346889999999998888899999999999999999999999877665
Q ss_pred HHHHHHH
Q 002356 905 KTFANIL 911 (931)
Q Consensus 905 ~~~~~I~ 911 (931)
..+.++.
T Consensus 216 ~~~~~~~ 222 (265)
T cd06652 216 AAIFKIA 222 (265)
T ss_pred HHHHHHh
Confidence 5555544
No 170
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.98 E-value=5e-31 Score=289.44 Aligned_cols=231 Identities=17% Similarity=0.282 Sum_probs=188.1
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
.+..++|++.+.||+|+||.||++.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4567899999999999999999997653 35689999876442 2233456778999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
..+..|+||||+.+|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997532 12346678899999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||+++....... ........++..|+|||.+.+..++.++|+|||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999864321100 0111223467789999999988899999999999999999
Q ss_pred Hc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 892 LY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 892 l~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
++ |.+||.+.+..++++.+..+. ..+|...+
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 98 899999988888888887654 35555443
No 171
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=1.6e-31 Score=288.12 Aligned_cols=224 Identities=38% Similarity=0.701 Sum_probs=192.8
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..++..||+|.+.+.........+.+.+|+.++++++||||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999998999999999987654444567889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.|++|..++... ..+++..+..++.||++||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~----- 153 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD----- 153 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-----
Confidence 99999999999765 35899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---HHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKT 906 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---~~~~ 906 (931)
.......|+..|+|||.+....++.++|+||||+++|+|++|..||...+ ...+
T Consensus 154 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 154 -----------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred -----------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 01123458889999999998888999999999999999999999999876 4555
Q ss_pred HHHHHcCCCCCCCCCcC
Q 002356 907 FANILHKDLKFPSSTPR 923 (931)
Q Consensus 907 ~~~I~~~~~~~p~~~~~ 923 (931)
.+.+......+|...+.
T Consensus 211 ~~~~~~~~~~~~~~~~~ 227 (258)
T cd05578 211 RAKQETADVLYPATWST 227 (258)
T ss_pred HHHhccccccCcccCcH
Confidence 54444456667766553
No 172
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.98 E-value=4.8e-31 Score=285.66 Aligned_cols=217 Identities=28% Similarity=0.419 Sum_probs=184.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 58999999999999999999999999999999887654445566677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999988642 22458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--HH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 904 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~~ 904 (931)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||.... ..
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 01123468899999999988888999999999999999999999997543 34
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
++...+..
T Consensus 215 ~~~~~~~~ 222 (267)
T cd08228 215 SLCQKIEQ 222 (267)
T ss_pred HHHHHHhc
Confidence 55555544
No 173
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.98 E-value=5.7e-31 Score=289.49 Aligned_cols=216 Identities=28% Similarity=0.464 Sum_probs=184.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..+.|++++.||.|+||.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++..++.+|+
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence 446799999999999999999999999999999998654 34556778899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+.+++|..++.... ..+++..++.++.||+.+|.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 87 MIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred EEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 999999999988876532 45899999999999999999999999999999999999999999999999987432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
........|++.|+|||++. ...++.++|+|||||++|+|++|.+||...
T Consensus 164 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 -------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred -------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11122456889999999984 344677999999999999999999999888
Q ss_pred CHHHHHHHHHcC
Q 002356 902 TRQKTFANILHK 913 (931)
Q Consensus 902 ~~~~~~~~I~~~ 913 (931)
+..+.+.++...
T Consensus 219 ~~~~~~~~~~~~ 230 (292)
T cd06644 219 NPMRVLLKIAKS 230 (292)
T ss_pred cHHHHHHHHhcC
Confidence 777766666554
No 174
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-32 Score=257.95 Aligned_cols=214 Identities=23% Similarity=0.406 Sum_probs=186.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|..++.||+|.||+||++++..++..||+|.+..+.. +........+|+.+|+.|+|.|||+++++...+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 468889999999999999999999999999999876532 2233456789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||| ..+|..+..... +.++.+.++.++.|++.||.|+|++++.|||+||.|+||+.+|.+||+|||+++.++.+
T Consensus 81 e~c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip---- 154 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---- 154 (292)
T ss_pred HHh-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc----
Confidence 999 778888887642 45899999999999999999999999999999999999999999999999999766421
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~ 906 (931)
..-.+.-+-|.+|.+|.++.+.. |+...|+||.|||+.|+.. |.+.|.+.+..+.
T Consensus 155 -----------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred -----------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 11223446799999999998865 6789999999999999995 9999999999999
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+++|..
T Consensus 212 lkrif~ 217 (292)
T KOG0662|consen 212 LKRIFR 217 (292)
T ss_pred HHHHHH
Confidence 999865
No 175
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.98 E-value=4.8e-31 Score=284.70 Aligned_cols=227 Identities=25% Similarity=0.381 Sum_probs=190.8
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++.+.||.|+||.||++.+. .++.+|+|.+..... ..+.+.+|+.+++.++||||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999875 457799999875432 345688899999999999999999999998999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++||||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999998765566999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
. ........++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 157 E--------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred h--------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0 000112234678999999998889999999999999999998 9999999888
Q ss_pred HHHHHHHHcC-CCCCCCCCc
Q 002356 904 QKTFANILHK-DLKFPSSTP 922 (931)
Q Consensus 904 ~~~~~~I~~~-~~~~p~~~~ 922 (931)
...++++..+ ....|...+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~ 230 (261)
T cd05034 211 REVLEQVERGYRMPRPPNCP 230 (261)
T ss_pred HHHHHHHHcCCCCCCCCCCC
Confidence 8888888765 234444443
No 176
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=3.4e-31 Score=292.70 Aligned_cols=214 Identities=25% Similarity=0.396 Sum_probs=180.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++.+.||.|+||.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 35789999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred EEeccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 999995 68998887643 458999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 159 --------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred --------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 111233578999999998654 47789999999999999999999999888766
Q ss_pred HHHHHH
Q 002356 906 TFANIL 911 (931)
Q Consensus 906 ~~~~I~ 911 (931)
....+.
T Consensus 213 ~~~~~~ 218 (301)
T cd07873 213 QLHFIF 218 (301)
T ss_pred HHHHHH
Confidence 665544
No 177
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=3.2e-31 Score=287.21 Aligned_cols=217 Identities=25% Similarity=0.413 Sum_probs=181.2
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++......|+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 3468999999999999999999999999999999986542 2334567789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06646 84 CMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT-- 159 (267)
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc--
Confidence 99999999999998764 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........|++.|+|||.+. ...++.++|+|||||++|+|++|+.||.....
T Consensus 160 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~ 214 (267)
T cd06646 160 -------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP 214 (267)
T ss_pred -------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence 01112346889999999984 34467799999999999999999999976655
Q ss_pred HHHHHHHHcCCC
Q 002356 904 QKTFANILHKDL 915 (931)
Q Consensus 904 ~~~~~~I~~~~~ 915 (931)
.+....+....+
T Consensus 215 ~~~~~~~~~~~~ 226 (267)
T cd06646 215 MRALFLMSKSNF 226 (267)
T ss_pred hhhheeeecCCC
Confidence 444444434333
No 178
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=6.1e-31 Score=287.65 Aligned_cols=213 Identities=28% Similarity=0.460 Sum_probs=182.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
-|++.+.||.|+||.||++.+..++..+++|.+... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 378899999999999999999999999999998653 33456678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|..++... ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----- 156 (282)
T cd06643 83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----- 156 (282)
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----
Confidence 99999999887653 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
........|++.|+|||++. ...++.++|+|||||++|+|++|++||...+..
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 157 ----------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred ----------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 01123456899999999984 345677999999999999999999999988877
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
+.+.++...
T Consensus 215 ~~~~~~~~~ 223 (282)
T cd06643 215 RVLLKIAKS 223 (282)
T ss_pred HHHHHHhhc
Confidence 777777654
No 179
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=7.3e-31 Score=284.27 Aligned_cols=230 Identities=28% Similarity=0.440 Sum_probs=189.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh------HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
+|.+...||.|+||.||++.+..+++.||+|.+........ .....+.+|+.+++.++||||+++++++....+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47888999999999999999988899999998875433221 234567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.++||||+++++|.+++... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999765 3489999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.... ...........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0000111235688999999999988889999999999999999999999998777
Q ss_pred HHHHHHHHcC-CCCCCCCCc
Q 002356 904 QKTFANILHK-DLKFPSSTP 922 (931)
Q Consensus 904 ~~~~~~I~~~-~~~~p~~~~ 922 (931)
...+.++... ...+|...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06628 218 LQAIFKIGENASPEIPSNIS 237 (267)
T ss_pred HHHHHHHhccCCCcCCcccC
Confidence 6666666554 234554443
No 180
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=6.6e-31 Score=285.98 Aligned_cols=215 Identities=30% Similarity=0.495 Sum_probs=188.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++.....+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47999999999999999999999999999999987542 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++... .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999999764 58999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|++||...+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11224568899999999998889999999999999999999999998877777777
Q ss_pred HHHcCCC
Q 002356 909 NILHKDL 915 (931)
Q Consensus 909 ~I~~~~~ 915 (931)
.+..+..
T Consensus 209 ~~~~~~~ 215 (274)
T cd06609 209 LIPKNNP 215 (274)
T ss_pred HhhhcCC
Confidence 6666543
No 181
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=4.4e-31 Score=284.38 Aligned_cols=212 Identities=24% Similarity=0.424 Sum_probs=181.6
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEE-EeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~ 743 (931)
.+...+|++.+.||+|+||.||++.. .+..+|+|.+... .....+.+|+.+++.++|+|++++++++ ...+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 45677999999999999999999977 4778999987543 2345688999999999999999999875 45677
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.|++|||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 89999999999999999876555689999999999999999999999999999999999999999999999998853210
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
......++..|+|||++....++.++|||||||++|+|++ |+.||...+
T Consensus 155 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 ------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred ------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0112234568999999998889999999999999999997 999999888
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..++...+.++
T Consensus 205 ~~~~~~~~~~~ 215 (256)
T cd05082 205 LKDVVPRVEKG 215 (256)
T ss_pred HHHHHHHHhcC
Confidence 88888777665
No 182
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=3.8e-31 Score=285.54 Aligned_cols=217 Identities=25% Similarity=0.393 Sum_probs=183.7
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|++++.||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++||||+++++++. .+.+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 355678999999999999999999864 567899999875432 2356888999999999999999998874 5678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||+.+++|.+++.......++...+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999999987765566899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
. ........++..|+|||++....++.++||||||+++|+|++ |++||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 156 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0 011123346778999999998889999999999999999998 9999998888
Q ss_pred HHHHHHHHcC
Q 002356 904 QKTFANILHK 913 (931)
Q Consensus 904 ~~~~~~I~~~ 913 (931)
.++...+..+
T Consensus 210 ~~~~~~~~~~ 219 (260)
T cd05067 210 PEVIQNLERG 219 (260)
T ss_pred HHHHHHHHcC
Confidence 8888777654
No 183
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=3.4e-31 Score=297.56 Aligned_cols=221 Identities=26% Similarity=0.383 Sum_probs=178.8
Q ss_pred ccccCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (931)
|++..++|++.+.||.|+||.||++.+.. +++.||+|.+.... .......+..|+.+++++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 44566799999999999999999997543 45789999886532 233456678899999999 89999999998
Q ss_pred EEe-CCeEEEEEeccCCCCHHHHHhhCCC---------------------------------------------------
Q 002356 738 FQT-KTHVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 765 (931)
Q Consensus 738 ~~~-~~~~~lVmE~~~ggsL~~~l~~~~~--------------------------------------------------- 765 (931)
+.. +..++++|||+.+++|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 5678999999999999999864321
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhh
Q 002356 766 --------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 837 (931)
Q Consensus 766 --------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 837 (931)
..++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 2578899999999999999999999999999999999999999999999999865321100
Q ss_pred cccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q 002356 838 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (931)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~ 911 (931)
........+++.|+|||++.+..++.++|||||||+||+|++ |..||.+....+.+...+
T Consensus 229 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~ 289 (337)
T cd05054 229 --------------YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL 289 (337)
T ss_pred --------------hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 011223456778999999999999999999999999999997 999998755444443333
No 184
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=2.7e-31 Score=285.91 Aligned_cols=212 Identities=39% Similarity=0.641 Sum_probs=180.3
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|++.+.||+|+||.||++.+..+++.||+|++....... .......+|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 788999999999999999999999999999998763322 2223345699999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+.+++|.+++... ..++...+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------- 149 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--------
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 9988999999843 448999999999999999999999999999999999999999999999999985421
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCC---CHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKT 906 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~G~~Pf~~~---~~~~~ 906 (931)
..........+++.|+|||++. +..++.++|+||||+++|+|++|..||... +....
T Consensus 150 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~ 210 (260)
T PF00069_consen 150 -------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI 210 (260)
T ss_dssp -------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred -------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0112233557899999999998 788899999999999999999999999987 34444
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+.+...
T Consensus 211 ~~~~~~ 216 (260)
T PF00069_consen 211 IEKILK 216 (260)
T ss_dssp HHHHHH
T ss_pred hhhccc
Confidence 444443
No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=6.2e-31 Score=287.30 Aligned_cols=195 Identities=29% Similarity=0.472 Sum_probs=171.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||++.+..+++.||+|.+.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36889999999999999999999999999999987542 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|..+. .+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~----- 147 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN----- 147 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-----
Confidence 999999996542 378889999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 148 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 148 ------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred ------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 012235789999999999988899999999999999999999999964
No 186
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=4.6e-31 Score=292.54 Aligned_cols=232 Identities=23% Similarity=0.346 Sum_probs=188.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+ +||||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 3456789999999999999999998743 23579999987542 233456788899999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
++...+..|+||||+.+++|.+++..+.. ..++...+..++.||+.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 99999999999999999999999976421 2478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|+|
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 226 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 226 (307)
T ss_pred EEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHH
Confidence 999999999999999854321000 0001112345789999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 883 SlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
||||++|+|++ |..||.+.+..+++..+..+. ..+|...+.
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN 269 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCH
Confidence 99999999998 999999888888888777664 355554443
No 187
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=5.7e-31 Score=285.10 Aligned_cols=217 Identities=29% Similarity=0.448 Sum_probs=184.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.+|+|.+.............+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654445556678889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999998742 23458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH--H
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~ 904 (931)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999988899999999999999999999999975432 3
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
+..+.+..
T Consensus 215 ~~~~~~~~ 222 (267)
T cd08229 215 SLCKKIEQ 222 (267)
T ss_pred HHhhhhhc
Confidence 45555544
No 188
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=300.25 Aligned_cols=202 Identities=27% Similarity=0.349 Sum_probs=172.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-eEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~l 746 (931)
.+.|.-...||+|+||.||++.... +..+|||.+....... ..+|.+|+.+|.+++|||+|+|++||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 4688888999999999999998844 4899999876643211 455999999999999999999999999988 5999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---IiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
|+||+++|+|.++|.......+++.....|+.+++.||+|||... ||||||||+|||+|.++..||+|||+|+....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998754326899999999999999999999964 99999999999999999999999999954321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccc-ccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
. . ....+. .||.+|++||++.....+.++||||||++|+||++|+.|...
T Consensus 230 ~-~--------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 230 G-D--------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred c-c--------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence 0 0 000111 699999999999988899999999999999999999988874
No 189
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=6.3e-31 Score=294.22 Aligned_cols=221 Identities=19% Similarity=0.313 Sum_probs=179.6
Q ss_pred cccccccc--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 673 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 673 i~~~LG~G--~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
+++.||+| +|++||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 778999999999999999999876432 233455677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~--- 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR--- 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc---
Confidence 99999999997654455899999999999999999999999999999999999999999999999875332110000
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
. ...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||......+.+.
T Consensus 158 -----~------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 220 (327)
T cd08227 158 -----L------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (327)
T ss_pred -----c------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 0 000011123457788999999976 458899999999999999999999998877666655
Q ss_pred HHHcCC
Q 002356 909 NILHKD 914 (931)
Q Consensus 909 ~I~~~~ 914 (931)
....+.
T Consensus 221 ~~~~~~ 226 (327)
T cd08227 221 EKLNGT 226 (327)
T ss_pred HHhcCC
Confidence 555443
No 190
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=7.4e-31 Score=283.51 Aligned_cols=217 Identities=41% Similarity=0.762 Sum_probs=188.4
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||.|+||.||++.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++..+..+|++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999988999999999876554555667899999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++.+. ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~------------ 146 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG------------ 146 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc------------
Confidence 9999765 34899999999999999999999999999999999999999999999999998543211
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHH--c
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANIL--H 912 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~~~~~~~I~--~ 912 (931)
.......|++.|++||.+....++.++|+||||+++|+|++|..||.... ..+.+.++. .
T Consensus 147 ----------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 147 ----------------QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred ----------------cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 01123468899999999988888999999999999999999999998776 777888887 3
Q ss_pred CCCCCCCCCcC
Q 002356 913 KDLKFPSSTPR 923 (931)
Q Consensus 913 ~~~~~p~~~~~ 923 (931)
..+.+|...+.
T Consensus 211 ~~~~~~~~~~~ 221 (262)
T cd05572 211 GKLEFPNYIDK 221 (262)
T ss_pred CCCCCCcccCH
Confidence 45677766533
No 191
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=6e-31 Score=287.57 Aligned_cols=229 Identities=21% Similarity=0.318 Sum_probs=189.7
Q ss_pred cCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
...+|++.+.||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 4568899999999999999999753 35678999987653 334556788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~-------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
+.++++|||+.+++|.+++..... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 999999999999999999976421 2478999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHH
Q 002356 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (931)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil 888 (931)
.+||+|||++....... .........+++.|+|||++.+..++.++|||||||++
T Consensus 160 ~~kL~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 160 VVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred CEEECCCCceeEcCCCc-------------------------eeecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 99999999985432110 00112233467899999999988899999999999999
Q ss_pred HHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcC
Q 002356 889 YEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTPR 923 (931)
Q Consensus 889 ~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~ 923 (931)
|+|++ |.+||......+.+..+.++. ...|...+.
T Consensus 215 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (280)
T cd05092 215 WEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPP 251 (280)
T ss_pred HHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCH
Confidence 99998 999999888888888887764 444554443
No 192
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=4.6e-31 Score=290.18 Aligned_cols=232 Identities=22% Similarity=0.362 Sum_probs=191.3
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCcccee
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (931)
....+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++.+ +||||++++
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 34557778999999999999999999998643 3789999987542 233456688999999999 899999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
+++...+.++++|||+.+++|..++... ....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 9999999999999999999999999642 23468999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
|+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred EEEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccce
Confidence 9999999999999999865421100 001112235678999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCC
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSS 920 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~ 920 (931)
|||||++|+|++ |..||.+....++++.+..+. ..+|..
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 258 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQN 258 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCC
Confidence 999999999997 999999988888888777654 244443
No 193
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=4.7e-31 Score=284.47 Aligned_cols=217 Identities=23% Similarity=0.358 Sum_probs=183.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+.++|++.+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.++||||+++++++.....+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 35689999999999999999998744 44699998865422 23568889999999999999999999999899999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||+.+++|.+++..... .+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 77 v~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-
Confidence 9999999999999976433 58999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~ 905 (931)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+
T Consensus 155 -------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 155 -------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred -------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 011112346678999999988889999999999999999998 999999888888
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
+...+.++..
T Consensus 210 ~~~~~~~~~~ 219 (256)
T cd05113 210 TVEKVSQGLR 219 (256)
T ss_pred HHHHHhcCCC
Confidence 8888887654
No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=8.2e-31 Score=284.68 Aligned_cols=214 Identities=29% Similarity=0.442 Sum_probs=179.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------ 740 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------ 740 (931)
.+.|++.+.||.|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 357999999999999999999999999999999986542 2335678899999998 79999999999875
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...+|++|||+.+++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 35689999999999999999875555689999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
.... ........|++.|+|||++. ...++.++|+|||||++|+|++|+
T Consensus 161 ~~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~ 213 (272)
T cd06637 161 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 213 (272)
T ss_pred cccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 3210 01123456899999999986 345788999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
.||...........+..
T Consensus 214 ~p~~~~~~~~~~~~~~~ 230 (272)
T cd06637 214 PPLCDMHPMRALFLIPR 230 (272)
T ss_pred CCccccCHHHHHHHHhc
Confidence 99987665555544443
No 195
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=9.8e-31 Score=290.14 Aligned_cols=206 Identities=28% Similarity=0.453 Sum_probs=179.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999986532 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||++|++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999765 458999999999999999999998 5999999999999999999999999998743210
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0112457899999999998888899999999999999999999999876654443
No 196
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3.4e-32 Score=304.04 Aligned_cols=211 Identities=25% Similarity=0.380 Sum_probs=183.6
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecc-cccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe--EEEEEe
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH--VCLITD 749 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~-~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~lVmE 749 (931)
.-..||+|+|-+||++.|..+|..||--.++.. .........++..|+.+|+.|+||||+++|+++.+... +-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 345699999999999999999988876655432 23455667899999999999999999999999986554 789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~~~~ 826 (931)
++..|+|..|+++. +.++...++.|++|||+||.|||++ -|||||||.+||||+. .|.|||+|+|+|.....+
T Consensus 124 L~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred cccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 99999999999886 4489999999999999999999999 4999999999999985 489999999999765321
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCC-CCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR-GKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~-~~~~~~ 905 (931)
...+.+|||.|||||++. ..|+..+||||||.||+||+|+..||. +.+..+
T Consensus 200 ---------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ 251 (632)
T KOG0584|consen 200 ---------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ 251 (632)
T ss_pred ---------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH
Confidence 223578999999999997 669999999999999999999999998 789999
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
+|+++.+|..
T Consensus 252 IYKKV~SGiK 261 (632)
T KOG0584|consen 252 IYKKVTSGIK 261 (632)
T ss_pred HHHHHHcCCC
Confidence 9999999863
No 197
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=9.7e-31 Score=283.41 Aligned_cols=219 Identities=23% Similarity=0.291 Sum_probs=185.6
Q ss_pred cCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..++|++.+.||+|+||.||++.+..+ ...+|+|.+.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence 346899999999999999999998644 4589999886542 33445678889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.++||||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 80 VMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999999997653 3589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
.... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||....
T Consensus 159 ~~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~ 213 (266)
T cd05033 159 SEAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred cccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC
Confidence 1000 00112235678999999998889999999999999999997 999999888
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..+....+.++
T Consensus 214 ~~~~~~~~~~~ 224 (266)
T cd05033 214 NQDVIKAVEDG 224 (266)
T ss_pred HHHHHHHHHcC
Confidence 88888888765
No 198
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=6.4e-31 Score=289.00 Aligned_cols=221 Identities=22% Similarity=0.318 Sum_probs=186.6
Q ss_pred cCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
...+|.+.+.||+|+||.||++.+.. ++..+++|.+... .....+.+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 45679999999999999999998643 4567899987643 234456788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q 002356 742 THVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~ 807 (931)
+..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997542 2348899999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHH
Q 002356 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (931)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvi 887 (931)
+.++|+|||++........ ........|++.|+|||++.+..++.++|||||||+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 214 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214 (291)
T ss_pred CcEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence 9999999999854321100 011223457889999999998889999999999999
Q ss_pred HHHHHc-CCCCCCCCCHHHHHHHHHcCCC
Q 002356 888 LYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (931)
Q Consensus 888 l~ell~-G~~Pf~~~~~~~~~~~I~~~~~ 915 (931)
+|+|++ |..||...+..+.++.+..+..
T Consensus 215 l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 243 (291)
T cd05094 215 LWEIFTYGKQPWFQLSNTEVIECITQGRV 243 (291)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhCCCC
Confidence 999998 9999998888888888877654
No 199
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=5.8e-31 Score=287.13 Aligned_cols=199 Identities=36% Similarity=0.611 Sum_probs=172.8
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||+|+||.||+|.+..+++.||+|.+.+...........+..|+++|+.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999765433334455667899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~------------- 147 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG------------- 147 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-------------
Confidence 9999876545699999999999999999999999999999999999999999999999998854321
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........|+..|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 148 ---------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 199 (277)
T cd05577 148 ---------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE 199 (277)
T ss_pred ---------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence 0011234578899999999888889999999999999999999999976543
No 200
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=9.2e-31 Score=289.51 Aligned_cols=223 Identities=23% Similarity=0.351 Sum_probs=185.0
Q ss_pred cccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (931)
.+..++|.+.+.||.|+||.||++.+. .++..+|+|.++... .......+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 355678999999999999999999763 345689999887542 234456788999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 739 ~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
...+..|+||||+.+++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654445899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~P 897 (931)
........ ........+++.|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus 189 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321100 011123356789999999998889999999999999999998 9999
Q ss_pred CCCCCHHHHHHHHHcCC
Q 002356 898 FRGKTRQKTFANILHKD 914 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~ 914 (931)
|.+....+.+.++....
T Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (302)
T cd05055 244 YPGMPVDSKFYKLIKEG 260 (302)
T ss_pred cCCCCchHHHHHHHHcC
Confidence 98877666555555443
No 201
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=8.8e-31 Score=281.78 Aligned_cols=223 Identities=25% Similarity=0.473 Sum_probs=192.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...++.|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875433 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 9999999999976544458999999999999999999999999999999999999999999999999985432100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+..+++..
T Consensus 156 -----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 156 -----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred -----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 011234588899999999888888999999999999999999999998888888888
Q ss_pred HHcCCC-CCCCC
Q 002356 910 ILHKDL-KFPSS 920 (931)
Q Consensus 910 I~~~~~-~~p~~ 920 (931)
++.+.. ..|..
T Consensus 213 ~~~~~~~~~~~~ 224 (256)
T cd08218 213 IIRGSYPPVSSH 224 (256)
T ss_pred HhcCCCCCCccc
Confidence 887765 34443
No 202
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-33 Score=330.51 Aligned_cols=236 Identities=28% Similarity=0.462 Sum_probs=200.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..-+|+....||.|.||.||.+.+..+|...|||-++..... ......+.+|..+|..++|||+|++|++-...+.++|
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345788889999999999999999999999999998765443 5666778899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
.||||.||+|.+++... +..++...+.+..|++.||.|||+.|||||||||.||+++.+|.+|++|||.|........
T Consensus 1312 FMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 99999999999999874 4588899999999999999999999999999999999999999999999999976542211
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCCCCCCC-C
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGK-T 902 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~~~-~ 902 (931)
.. ........||+.|||||++.+ .+..-+.|||||||++.||+||+.||... +
T Consensus 1390 ~~-----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1390 TM-----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred cC-----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 00 023346789999999999965 44667999999999999999999999864 4
Q ss_pred HHHHHHHHHcC-CCCCCCCCcCChhhhhc
Q 002356 903 RQKTFANILHK-DLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 903 ~~~~~~~I~~~-~~~~p~~~~~~~~~~~~ 930 (931)
...++.++-.| .+++|.. .|.+..+|
T Consensus 1447 e~aIMy~V~~gh~Pq~P~~--ls~~g~dF 1473 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPER--LSSEGRDF 1473 (1509)
T ss_pred hhHHHhHHhccCCCCCchh--hhHhHHHH
Confidence 55777888877 4789988 55555544
No 203
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=8.3e-31 Score=284.20 Aligned_cols=220 Identities=24% Similarity=0.341 Sum_probs=184.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~---~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
...+|++.+.||.|+||.||++.+..++ ..+|+|.+.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 3568999999999999999999986443 479999886542 23345678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
+|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999999997653 3589999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
.... ........++..|++||.+.+..++.++|+|||||++|++++ |..||...+
T Consensus 159 ~~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 159 DPEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred ccce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 1100 000112234568999999998889999999999999999886 999999888
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..+.+..+.++
T Consensus 215 ~~~~~~~~~~~ 225 (267)
T cd05066 215 NQDVIKAIEEG 225 (267)
T ss_pred HHHHHHHHhCC
Confidence 88888888765
No 204
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=9.4e-31 Score=291.07 Aligned_cols=232 Identities=22% Similarity=0.331 Sum_probs=189.5
Q ss_pred ccccCCCccccccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCcccee
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (931)
+.+..++|.+.+.||+|+||.||++.+.. ....+|+|.+.... .......+..|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556789999999999999999998632 34579999887532 234456788999999999 699999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
+++...+.+|++|||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999999999999997532 2348889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
||++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 219 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDV 219 (314)
T ss_pred EEEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchh
Confidence 9999999999999999864321100 001112234568999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
|||||++|+|++ |..||.+.+..+++..+..+. ..+|...+
T Consensus 220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (314)
T cd05099 220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCT 262 (314)
T ss_pred hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 999999999998 999999988888888887764 35555444
No 205
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=1.4e-30 Score=280.97 Aligned_cols=216 Identities=27% Similarity=0.451 Sum_probs=186.4
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.+++|++.... ......+.+|+.+++.++||||+++++++.....+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 58999999999999999999999899999999997642 235677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++.... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 9999999999987642 35899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........|+..|+|||.+... .++.++|+|||||++|+|++|++||.+.+..+
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0112235688899999999776 78889999999999999999999999877666
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
....+....+
T Consensus 212 ~~~~~~~~~~ 221 (262)
T cd06613 212 ALFLISKSNF 221 (262)
T ss_pred HHHHHHhccC
Confidence 6666655543
No 206
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=1.3e-30 Score=279.99 Aligned_cols=218 Identities=22% Similarity=0.334 Sum_probs=179.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.++||||+++++++.....+|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3345567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 79 ~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 149 (252)
T cd05084 79 DFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-------- 149 (252)
T ss_pred cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--------
Confidence 9999987543 3589999999999999999999999999999999999999999999999999854221000
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+.......+..+
T Consensus 150 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~ 212 (252)
T cd05084 150 -----------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212 (252)
T ss_pred -----------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 000011123467999999988889999999999999999997 99999888777776666654
Q ss_pred -CCCCCCC
Q 002356 914 -DLKFPSS 920 (931)
Q Consensus 914 -~~~~p~~ 920 (931)
...+|..
T Consensus 213 ~~~~~~~~ 220 (252)
T cd05084 213 VRLPCPEL 220 (252)
T ss_pred CCCCCccc
Confidence 3344443
No 207
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=9.4e-31 Score=285.47 Aligned_cols=230 Identities=22% Similarity=0.341 Sum_probs=187.5
Q ss_pred cCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..+.|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+..|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 45679999999999999999999977 77899999876432 233445688899999999999999999999998
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEE
Q 002356 742 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 813 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~ 813 (931)
...++||||+.|++|.+++..... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999976421 2589999999999999999999999999999999999998655 59999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 893 (931)
|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999864321000 001112234568999999998889999999999999999996
Q ss_pred -CCCCCCCCCHHHHHHHHHcC-CCCCCCCCcC
Q 002356 894 -GYTPFRGKTRQKTFANILHK-DLKFPSSTPR 923 (931)
Q Consensus 894 -G~~Pf~~~~~~~~~~~I~~~-~~~~p~~~~~ 923 (931)
|..||.+.+..+++..+... ...+|...+.
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPG 248 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCH
Confidence 99999998888877776553 3455554443
No 208
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.2e-30 Score=287.80 Aligned_cols=210 Identities=25% Similarity=0.440 Sum_probs=180.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
..+|++.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++......|+|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3589999999999999999999999999999999876432 3346688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||++|++|.+++... .++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-- 170 (296)
T cd06654 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (296)
T ss_pred ecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc--
Confidence 9999999999998653 47899999999999999999999999999999999999999999999999885422100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.....
T Consensus 171 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~ 225 (296)
T cd06654 171 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (296)
T ss_pred -------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH
Confidence 0112346889999999999888899999999999999999999999877664443
Q ss_pred HHH
Q 002356 908 ANI 910 (931)
Q Consensus 908 ~~I 910 (931)
..+
T Consensus 226 ~~~ 228 (296)
T cd06654 226 YLI 228 (296)
T ss_pred HHH
Confidence 333
No 209
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=8.8e-31 Score=282.85 Aligned_cols=216 Identities=25% Similarity=0.352 Sum_probs=181.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|.+...||+|+||.||++.+..+ ..+|+|.+.... .....+.+|+.+++.++|||++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4456799999999999999999988655 458999876532 22356788999999999999999998875 46689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
++|||+.+++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999987555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112346778999999988889999999999999999999 99999998888
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
+....+.++
T Consensus 211 ~~~~~~~~~ 219 (260)
T cd05069 211 EVLEQVERG 219 (260)
T ss_pred HHHHHHHcC
Confidence 888877665
No 210
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=1.1e-30 Score=288.23 Aligned_cols=224 Identities=23% Similarity=0.341 Sum_probs=184.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~--~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
++|++.+.||.|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877654 4688877632 2334456788999999999 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 746 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
++|||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 12488899999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 891 (931)
|+|||++...... ........+..|+|||++.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999998421100 000111235579999999988899999999999999999
Q ss_pred Hc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 892 LY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 892 l~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
++ |..||.+.+..+++.++.++. ...|...+
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCD 244 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 97 999999998888888887763 34444433
No 211
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.9e-30 Score=280.87 Aligned_cols=218 Identities=26% Similarity=0.384 Sum_probs=183.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeeccc--ccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (931)
.+|.+.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|+.+++.++||||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999875432 12234567788999999999999999999998753 568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||+++++|.+++.... .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999999987643 3889999999999999999999999999999999999999999999999998643210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.. .........|+..|+|||.+.+..++.++|+|||||++|+|++|++||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 00 001112356899999999999888899999999999999999999999887766
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
..+.++..
T Consensus 216 ~~~~~~~~ 223 (264)
T cd06653 216 AAIFKIAT 223 (264)
T ss_pred HHHHHHHc
Confidence 66666654
No 212
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=8.4e-31 Score=286.63 Aligned_cols=212 Identities=26% Similarity=0.413 Sum_probs=177.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|++|.||++.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58899999999999999999999999999999865422 22334667889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|+. ++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 995 68988886533 256899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.....
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 155 -----------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred -----------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0111233578999999998654 4688999999999999999999999987665444
Q ss_pred HHH
Q 002356 908 ANI 910 (931)
Q Consensus 908 ~~I 910 (931)
..+
T Consensus 212 ~~~ 214 (285)
T cd07861 212 FRI 214 (285)
T ss_pred HHH
Confidence 433
No 213
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-32 Score=303.09 Aligned_cols=196 Identities=28% Similarity=0.442 Sum_probs=172.5
Q ss_pred cccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 002356 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 755 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggs 755 (931)
.||.|.||+||-+++..|....|+|.+... +....+-+..||.+-++|+|.|||++++++..++++-|.||-++|||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 499999999999999999999999988643 34556778889999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 756 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 756 L~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
|.++|....+ ++ ++..+-+|.+||++||.|||.+.|||||||-+|||++ ..|.+||.|||-++...
T Consensus 659 LSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA---------- 727 (1226)
T KOG4279|consen 659 LSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA---------- 727 (1226)
T ss_pred HHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc----------
Confidence 9999987643 35 8899999999999999999999999999999999996 57899999999885432
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhcCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.-..-+.++.||..|||||++..+ +|+.++|||||||++.||.||++||....
T Consensus 728 -----------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg 782 (1226)
T KOG4279|consen 728 -----------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG 782 (1226)
T ss_pred -----------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecC
Confidence 112335688999999999999765 57889999999999999999999998543
No 214
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=1.7e-30 Score=281.01 Aligned_cols=219 Identities=30% Similarity=0.442 Sum_probs=186.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.||+|.++............+.+|+++++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999999899999999987654445555678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||+++++|..++... ....+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998642 23458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC--CHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--TRQ 904 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~--~~~ 904 (931)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||... +..
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 0112346889999999999888999999999999999999999999654 334
Q ss_pred HHHHHHHcCC
Q 002356 905 KTFANILHKD 914 (931)
Q Consensus 905 ~~~~~I~~~~ 914 (931)
++...+..+.
T Consensus 215 ~~~~~~~~~~ 224 (267)
T cd08224 215 SLCKKIEKCD 224 (267)
T ss_pred HHHhhhhcCC
Confidence 5555555543
No 215
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=1.4e-30 Score=280.74 Aligned_cols=223 Identities=22% Similarity=0.342 Sum_probs=182.7
Q ss_pred cccccCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 676 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~--~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
.||+|+||.||++.+ ..++..+|+|++.... ......+.+.+|+.+++.++||||+++++++. ....++||||+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 4567899999986542 23445677889999999999999999999875 4567899999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999764 35899999999999999999999999999999999999999999999999998654311100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~ 912 (931)
........+++.|+|||.+....++.++|+|||||++|+|++ |..||.+.+..++.+.+.+
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 000112235679999999988888999999999999999997 9999999888888888887
Q ss_pred CC-CCCCCCCcCChh
Q 002356 913 KD-LKFPSSTPRSKE 926 (931)
Q Consensus 913 ~~-~~~p~~~~~~~~ 926 (931)
+. ..+|...+....
T Consensus 214 ~~~~~~~~~~~~~l~ 228 (257)
T cd05116 214 GERMECPQRCPPEMY 228 (257)
T ss_pred CCCCCCCCCCCHHHH
Confidence 64 466665554433
No 216
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9.7e-31 Score=303.33 Aligned_cols=196 Identities=28% Similarity=0.385 Sum_probs=169.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
...+|.+.+.||.|+||.||++.+..+++.||+|.... ..+.+|+.+|++|+|+||+++++++...+..++
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 45689999999999999999999999999999995422 235679999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|||++ .++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 578988887543 3599999999999999999999999999999999999999999999999999864321100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
........||+.|+|||++.+..++.++|||||||+||||++|..|+
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 01112457999999999999999999999999999999999987654
No 217
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.3e-30 Score=282.84 Aligned_cols=226 Identities=25% Similarity=0.342 Sum_probs=184.4
Q ss_pred ccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (931)
|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999987653 4789999987542 23445677889999999999999999999876544
Q ss_pred -eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 743 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 743 -~~~lVmE~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
..+++|||+++++|..++... ....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 379999999999999998542 223589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~ 896 (931)
+........ ........++..|+|||.+....++.++|||||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 865421110 001112235678999999988889999999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 897 PFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
||.+.+..++++.+.++. ...|...+
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
T cd05035 215 PYPGVENHEIYDYLRHGNRLKQPEDCL 241 (273)
T ss_pred CCCCCCHHHHHHHHHcCCCCCCCcCCC
Confidence 999988888888887764 34554443
No 218
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1e-30 Score=289.19 Aligned_cols=230 Identities=22% Similarity=0.345 Sum_probs=188.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEe-------cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~-------~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (931)
.+..++|++.+.||+|+||.||++++. .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 356778999999999999999999853 234589999886532 234456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
++.....+|+||||+.+++|.+++..+. ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999997642 13477888999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 999999999999999864421100 0111223467789999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCC
Q 002356 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSST 921 (931)
Q Consensus 883 SlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~ 921 (931)
||||++|+|++ |..||.+.+..++++.+..+. ...|...
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANC 264 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCC
Confidence 99999999998 899999998888888887654 3444443
No 219
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=4.7e-31 Score=293.70 Aligned_cols=198 Identities=28% Similarity=0.433 Sum_probs=161.4
Q ss_pred cccccccCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeEEEEEe
Q 002356 674 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 749 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~lVmE 749 (931)
.+.||+|+||.||+|.+. .+++.||+|.+.... ....+.+|+.+|+.++||||+++++++.. ...+|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999975 367899999886532 12346789999999999999999998854 567899999
Q ss_pred ccCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE----ecCCcEEEEeccCC
Q 002356 750 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (931)
Q Consensus 750 ~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll----~~~g~vkL~DFG~a 818 (931)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 66898887532 12248999999999999999999999999999999999999 45678999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
........ +........||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 65431110 01122345789999999999774 578899999999999999999999
Q ss_pred CCCC
Q 002356 898 FRGK 901 (931)
Q Consensus 898 f~~~ 901 (931)
|.+.
T Consensus 216 f~~~ 219 (317)
T cd07868 216 FHCR 219 (317)
T ss_pred ccCC
Confidence 9754
No 220
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=1.4e-30 Score=284.42 Aligned_cols=219 Identities=21% Similarity=0.322 Sum_probs=181.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+..++|++.+.||.|+||.||++.+..++. .||+|.+.... .......+.+|+.+++.++||||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877765 48999886532 33445678899999999999999999998875
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...+++|||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987643 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
...... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 311100 00112235678999999998889999999999999999998 9999998
Q ss_pred CCHHHHHHHHHcC
Q 002356 901 KTRQKTFANILHK 913 (931)
Q Consensus 901 ~~~~~~~~~I~~~ 913 (931)
.....+...+..+
T Consensus 215 ~~~~~~~~~~~~~ 227 (279)
T cd05109 215 IPAREIPDLLEKG 227 (279)
T ss_pred CCHHHHHHHHHCC
Confidence 8777777666554
No 221
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=1.7e-30 Score=282.26 Aligned_cols=225 Identities=24% Similarity=0.333 Sum_probs=182.6
Q ss_pred ccccccccccCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------CC
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 742 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~--~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~ 742 (931)
|.+.+.||+|+||.||++.+..++. .+|+|.++... ........+..|+.+++.++||||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 4567889999999999999877664 69999887542 244556778899999999999999999987642 23
Q ss_pred eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 743 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
..+++|||+.+++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887431 1234899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~P 897 (931)
........ ........+++.|++||.+.+..++.++|||||||++|+|++ |+.|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65421100 011122346778999999999889999999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHcCCC-CCCCCC
Q 002356 898 FRGKTRQKTFANILHKDL-KFPSST 921 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~~-~~p~~~ 921 (931)
|.+....+++..+.++.. .+|...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd05075 215 YPGVENSEIYDYLRQGNRLKQPPDC 239 (272)
T ss_pred CCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 999888888888887653 444443
No 222
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=1.3e-30 Score=284.78 Aligned_cols=215 Identities=34% Similarity=0.613 Sum_probs=174.0
Q ss_pred cccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHH---HHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~---~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
.||+|+||.||++.+..+++.||+|.+.+...........+..|. .+++...||+|+.+++++...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765433222222233343 34455689999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
|++|..++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988764 45999999999999999999999999999999999999999999999999998533210
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC---CHHHHHH
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFA 908 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~---~~~~~~~ 908 (931)
......|++.|+|||++.+. .++.++|||||||++|+|++|+.||.+. .......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 11234689999999999754 6888999999999999999999999876 4444555
Q ss_pred HHHcCCCCCCCCC
Q 002356 909 NILHKDLKFPSST 921 (931)
Q Consensus 909 ~I~~~~~~~p~~~ 921 (931)
.+......+|...
T Consensus 210 ~~~~~~~~~~~~~ 222 (278)
T cd05606 210 MTLTMAVELPDSF 222 (278)
T ss_pred HhhccCCCCCCcC
Confidence 5555566676654
No 223
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=1.9e-30 Score=278.93 Aligned_cols=225 Identities=27% Similarity=0.469 Sum_probs=191.9
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..+++.+|+|.+..... .......+.+|+.+|+.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876543 33446778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~~~~~ 828 (931)
|+++++|.+++.......+++..+..++.|++.+|.|||++||+|+||+|+||+++.++ .++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 99999999999875555689999999999999999999999999999999999998554 6899999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468899999999988888899999999999999999999999888888887
Q ss_pred HHHcCCC-CCCCCCcC
Q 002356 909 NILHKDL-KFPSSTPR 923 (931)
Q Consensus 909 ~I~~~~~-~~p~~~~~ 923 (931)
.+..+.. .+|...+.
T Consensus 212 ~~~~~~~~~~~~~~~~ 227 (256)
T cd08220 212 KIMSGTFAPISDRYSP 227 (256)
T ss_pred HHHhcCCCCCCCCcCH
Confidence 7776543 45544433
No 224
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=2e-30 Score=279.19 Aligned_cols=212 Identities=24% Similarity=0.368 Sum_probs=184.4
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||.|+||.||++.. .++.+|+|.+..... ....+.+|+.+++.++|+||+++++++...+..+
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 478999999875421 4577889999999999999999999999899999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+++++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765456999999999999999999999999999999999999999999999999998543100
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
.....++..|+|||++....++.++|+|||||++|++++ |..||...+..
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001224567999999988889999999999999999997 99999988888
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
++...+.++
T Consensus 207 ~~~~~~~~~ 215 (256)
T cd05039 207 DVVPHVEKG 215 (256)
T ss_pred HHHHHHhcC
Confidence 877777654
No 225
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=259.45 Aligned_cols=229 Identities=27% Similarity=0.412 Sum_probs=187.5
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (931)
.+-.+..+.......||+|+||.|-+.++..+|...|+|.+.... +....++..+|+.+.... .+|++|.+|+.+..
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 344555667777889999999999999999999999999987542 334456777888876544 89999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
...++|.||.| ..||..+... ..+..+++..+-.|+.-++.||.|||++ .+||||+||+||||+.+|+||+||||+
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999999 7788776553 2356799999999999999999999987 999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC----CCCCChhhHHHHHHHHHHHHc
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell~ 893 (931)
+-....+- ....-.|.-.|||||.+.. .+|+-++||||||++++||.+
T Consensus 196 sG~L~dSi----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 196 SGYLVDSI----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ceeehhhh----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 85432111 1112358889999999843 478889999999999999999
Q ss_pred CCCCCCC-CCHHHHHHHHHcCC-CCCCCCC
Q 002356 894 GYTPFRG-KTRQKTFANILHKD-LKFPSST 921 (931)
Q Consensus 894 G~~Pf~~-~~~~~~~~~I~~~~-~~~p~~~ 921 (931)
++.||.. .++.++++++.... ..+|...
T Consensus 248 lr~PY~~w~tpF~qLkqvVeep~P~Lp~~~ 277 (282)
T KOG0984|consen 248 LRFPYESWGTPFQQLKQVVEEPSPQLPADT 277 (282)
T ss_pred ccccccccCCHHHHHHHHhcCCCCCCcccc
Confidence 9999975 67788888888754 4666553
No 226
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=2.2e-30 Score=279.57 Aligned_cols=214 Identities=42% Similarity=0.747 Sum_probs=182.1
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
+.||.|+||.||+|.+..+++.||+|.+.+...........+..|..++ ..++|+|++++++++...+.+|+||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999999999999999998765433333344455565554 445899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 3489999999999999999999999999999999999999999999999998743210
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
.....|++.|++||.+.+..++.++||||||+++|+|++|.+||...+..+++..+..+
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12346889999999998888889999999999999999999999999988888888887
Q ss_pred CCCCCCCC
Q 002356 914 DLKFPSST 921 (931)
Q Consensus 914 ~~~~p~~~ 921 (931)
...+|...
T Consensus 209 ~~~~~~~~ 216 (260)
T cd05611 209 RINWPEEV 216 (260)
T ss_pred ccCCCCcc
Confidence 77665543
No 227
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=1.9e-30 Score=285.57 Aligned_cols=219 Identities=25% Similarity=0.373 Sum_probs=184.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCC----------------eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~----------------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (931)
..++|.+++.||+|+||.||++.+..++ ..+|+|.+.... .......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 4568999999999999999999886543 568999987653 2345677889999999999999
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
|+++++++...+.++++|||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997643 1258999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
|+++.++.++|+|||++....... .........+++.|+|||++.+..++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999985432110 0112234457789999999988889999999
Q ss_pred HHHHHHHHHHHc--CCCCCCCCCHHHHHHHHHc
Q 002356 882 WALGILLYEMLY--GYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 882 wSlGvil~ell~--G~~Pf~~~~~~~~~~~I~~ 912 (931)
|||||++|+|++ |..||...+..+++..+..
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~ 248 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGH 248 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHh
Confidence 999999999997 7899988887777776654
No 228
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2.2e-30 Score=283.08 Aligned_cols=195 Identities=37% Similarity=0.685 Sum_probs=162.5
Q ss_pred cccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHH---hcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~---~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
.||+|+||.||++.+..+++.||+|.+.+...........+.+|..+++ ..+||||+.+++++...+..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999987654333333333444544444 3479999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
|++|.+++..+ ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998765 34999999999999999999999999999999999999999999999999998533210
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
......|++.|+|||.+. +..++.++|+|||||++|+|++|..||...
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 011235899999999986 456788999999999999999999999753
No 229
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=316.11 Aligned_cols=238 Identities=23% Similarity=0.358 Sum_probs=202.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
+....-++.+.||+|.||.||.+...... ..||+|.+++. .+......|.+|..+|+.++|||||++++++..
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 44567788899999999999999886543 34899988764 356778899999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEec
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DF 815 (931)
....+|++|||+||+|..+|+.. ....++...+..++.+|++|+.||+++++|||||...|+||+....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999864 1245899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-C
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G 894 (931)
|+|+.+.... -+.......-...|||||.+....++.++|||||||+|||+++ |
T Consensus 847 GlArDiy~~~-------------------------yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 847 GLARDIYDKD-------------------------YYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred chhHhhhhch-------------------------heeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 9997432110 0111111223468999999999999999999999999999997 9
Q ss_pred CCCCCCCCHHHHHHHHH-cCCCCCCCCCcCChhhhhc
Q 002356 895 YTPFRGKTRQKTFANIL-HKDLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 895 ~~Pf~~~~~~~~~~~I~-~~~~~~p~~~~~~~~~~~~ 930 (931)
..||.+.+..+++.-++ .|.+..|..+|....++|.
T Consensus 902 ~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~ 938 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLML 938 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHH
Confidence 99999999999999665 4689999999999888764
No 230
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=2.3e-30 Score=279.53 Aligned_cols=217 Identities=23% Similarity=0.346 Sum_probs=183.4
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..++|.+.+.||+|+||.||++.+. .+..+|+|.+... ....+.+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 456789999999999999999999864 4567999987653 2245678889999999999999999999887 788
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765556888999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
.. .......++..|+|||++....++.++|+|||||++|++++ |.+||.+.+.
T Consensus 156 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred Cc--------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 00 01112345678999999988888999999999999999998 9999998888
Q ss_pred HHHHHHHHcC
Q 002356 904 QKTFANILHK 913 (931)
Q Consensus 904 ~~~~~~I~~~ 913 (931)
.++...+..+
T Consensus 210 ~~~~~~~~~~ 219 (260)
T cd05073 210 PEVIRALERG 219 (260)
T ss_pred HHHHHHHhCC
Confidence 8877777655
No 231
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=2e-30 Score=283.58 Aligned_cols=213 Identities=26% Similarity=0.411 Sum_probs=179.6
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999865421 2223345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|..++... ..+++..++.++.||+.+|.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG--- 154 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc---
Confidence 999988888776543 348999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+..+..
T Consensus 155 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 155 ------------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred ------------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01123457889999999876 45788999999999999999999999988776665
Q ss_pred HHHH
Q 002356 908 ANIL 911 (931)
Q Consensus 908 ~~I~ 911 (931)
..+.
T Consensus 211 ~~~~ 214 (286)
T cd07847 211 YLIR 214 (286)
T ss_pred HHHH
Confidence 5543
No 232
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=7.1e-30 Score=320.21 Aligned_cols=418 Identities=11% Similarity=0.051 Sum_probs=303.9
Q ss_pred eeecccCCCCCcceeEeccCCCCCCCCCCCccCCCCCcceEEEecccccccccccccchHHHHHHHHHhcCCcEEEEeCC
Q 002356 129 LVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDAT 208 (931)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~ 208 (931)
..++...+.| .|+..........+|. ....+++.|||++|++|++|+++++.|+.++++++++++++|.
T Consensus 154 ~e~r~~~~dg--~~~~~~~~~~~~~~g~--------~~~~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~- 222 (807)
T PRK13560 154 EEGHFRCGDG--RFIDCCLRFERHAHAD--------DQVDGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE- 222 (807)
T ss_pred eEEEEEeCCc--cEEEEEeeeeecCCCc--------eEEEEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC-
Confidence 3444444444 4665544444443332 2356777999999999999999999999999999999999998
Q ss_pred CCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe--eee
Q 002356 209 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--API 286 (931)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~--~pi 286 (931)
+|+|+++|+++++++||+.+|++|+++..+.++..........+..+..++....+.+.+++||+.+|+.+.+ .|+
T Consensus 223 --~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~ 300 (807)
T PRK13560 223 --DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEF 300 (807)
T ss_pred --CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEE
Confidence 7889999999999999999999999988777666554444555566667777778888899999999776654 566
Q ss_pred ecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccC-CCCcccCCCCCcc-ccc
Q 002356 287 KDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKK-PRSLSESTNRPPI-IRK 364 (931)
Q Consensus 287 ~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~-~~~ 364 (931)
.|.+|.+.+++++++|||++|++|++|+.. .+....+...... ....+.......+ +..
T Consensus 301 ~~~~g~~~g~~~~~~DITerk~~e~~L~~s-------------------e~~l~~l~~~~~~~i~~~d~~g~i~~~nn~~ 361 (807)
T PRK13560 301 DDKENHCAGLVGAITDISGRRAAERELLEK-------------------EDMLRAIIEAAPIAAIGLDADGNICFVNNNA 361 (807)
T ss_pred EcCCCCEEEEEEEEEechHHHHHHHHHHHH-------------------HHHHHHHHHhCcccEEEEcCCCCEEEecCHH
Confidence 789999999999999999999999998731 1122233333332 2333444444444 344
Q ss_pred CCCCchhhhcccccCCCCCCCCCCCCCC--CC-------CC-----------cccccccccccchhcccccCCccccccc
Q 002356 365 SEGGVEEERAGALGRRKSENVPPPRRNS--YG-------GG-----------CRTSMQRISEVPEKKKQKSGRRSFMGLI 424 (931)
Q Consensus 365 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (931)
.+..+|+..+++.|+......++..... .. +. .......+.........++|...|+...
T Consensus 362 ~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~ 441 (807)
T PRK13560 362 AERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAY 441 (807)
T ss_pred HHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEE
Confidence 5668899999999988766544311100 00 00 0111112223344455677777777777
Q ss_pred cccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecCHHH
Q 002356 425 GRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSF 504 (931)
Q Consensus 425 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~ 504 (931)
..+..+.++...+.. ....|||+|++.|++++. .+.++++++++++..+..+ +..+.+|...
T Consensus 442 ~~p~~d~~g~~~~~~-------------~~~~DITerk~~E~~L~~---~~~~~e~~~~~i~~~~~~~--~~~~~~~~~~ 503 (807)
T PRK13560 442 AEPLHDADGNIIGAI-------------ALLVDITERKQVEEQLLL---ANLIVENSPLVLFRWKAEE--GWPVELVSKN 503 (807)
T ss_pred EeeeECCCCCEEEEE-------------EEeehhhhHHHHHHHHHH---HHHHHhcCCceEEEEecCC--CceEEEecch
Confidence 766666555444332 236899999999999987 5789999999999887652 2245566666
Q ss_pred HHHcCCChhhhcCC--CCCCCCCCCCCHHHHHHHHHHHHcC-CcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEE
Q 002356 505 LELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIG 581 (931)
Q Consensus 505 ~~l~Gys~eEllG~--~~~~l~~~~~~~~~~~~l~~~l~~~-~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vg 581 (931)
..++||+++++++. .+..+++|++.......+...+..+ ..+..++++.++||..+|+.....|++|.+|.+.+++|
T Consensus 504 ~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g 583 (807)
T PRK13560 504 ITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAAQGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEG 583 (807)
T ss_pred hhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHhcCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEE
Confidence 78899999999863 3556778888777777766666555 45788999999999999999999999999999999999
Q ss_pred EEecCCccccccccC
Q 002356 582 VQLDGSEHLEPLRNS 596 (931)
Q Consensus 582 i~rDITerk~~e~~~ 596 (931)
+++|||++|++|...
T Consensus 584 ~~~DITerK~aE~~L 598 (807)
T PRK13560 584 IVIDISERKHAEEKI 598 (807)
T ss_pred EEechHHHHHHHHHH
Confidence 999999999965443
No 233
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.2e-30 Score=285.58 Aligned_cols=211 Identities=27% Similarity=0.461 Sum_probs=183.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.+|++.+.||.|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.....+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ---KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc---cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 5799999999999999999999999999999998654 2234567788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|..++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999999998653 48999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468899999999998889999999999999999999999999887765555
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.+..
T Consensus 226 ~~~~ 229 (296)
T cd06655 226 LIAT 229 (296)
T ss_pred HHHh
Confidence 5543
No 234
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.8e-30 Score=280.02 Aligned_cols=224 Identities=44% Similarity=0.813 Sum_probs=192.3
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||.|+||.||++.+..+++.+++|.+.............+.+|+.+++.++||||+++++.+......|++|||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999999776444456677888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++.+.. .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99998753 589999999999999999999999999999999999999999999999999854321111000
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~ 916 (931)
...........+++.|++||.+....++.++|+||||+++|+|++|..||......+.+..+..+.+.
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888889999999999999999999999999999999999988888
Q ss_pred CCCCC
Q 002356 917 FPSST 921 (931)
Q Consensus 917 ~p~~~ 921 (931)
+|...
T Consensus 220 ~~~~~ 224 (265)
T cd05579 220 WPEDV 224 (265)
T ss_pred CCccc
Confidence 88775
No 235
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.6e-30 Score=286.86 Aligned_cols=204 Identities=25% Similarity=0.453 Sum_probs=178.2
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.+|++++.||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...++.|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|.+++... .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 999999999998653 48899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+...
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~ 222 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 01123468899999999998889999999999999999999999998765433
No 236
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=3.1e-30 Score=277.39 Aligned_cols=221 Identities=25% Similarity=0.383 Sum_probs=187.9
Q ss_pred ccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEecc
Q 002356 675 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
+.||+|+||.||++.+... +..|++|.+...... .....+.+|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999865 889999998765332 24678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 752 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 752 ~ggsL~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999998641 245899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||.+.+.
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 10 112234567889999999988889999999999999999998 6999999998
Q ss_pred HHHHHHHHcCC-CCCCCCCc
Q 002356 904 QKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 904 ~~~~~~I~~~~-~~~p~~~~ 922 (931)
.++.+.+.++. ..+|...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (262)
T cd00192 214 EEVLEYLRKGYRLPKPEYCP 233 (262)
T ss_pred HHHHHHHHcCCCCCCCccCC
Confidence 88888888653 35555543
No 237
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=2.7e-30 Score=280.16 Aligned_cols=220 Identities=23% Similarity=0.317 Sum_probs=184.0
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~---~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..+.|+..+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+++++.++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 45689999999999999999999876554 79999886542 23345678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999997643 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
.... .........++.|+|||++....++.++|||||||++|+|++ |..||...+
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred cccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 1100 000111223567999999988888999999999999999997 999999888
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..++...|..+
T Consensus 216 ~~~~~~~i~~~ 226 (268)
T cd05063 216 NHEVMKAINDG 226 (268)
T ss_pred HHHHHHHHhcC
Confidence 88888888764
No 238
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=2.8e-30 Score=281.97 Aligned_cols=226 Identities=23% Similarity=0.325 Sum_probs=187.8
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+...+|++.+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 345789999999999999999999876654 68999876543 24455678899999999999999999999887
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...++||||+.+++|.+++..+. ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 78899999999999999998653 34899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
...... .......++..|+|||.+....++.++|+|||||++|++++ |+.||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 160 DVDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred cCcccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 311100 00011224578999999988888999999999999999998 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCC
Q 002356 901 KTRQKTFANILHKD-LKFPSS 920 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~ 920 (931)
....++.+.+.++. +..|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (279)
T cd05057 215 IPAVEIPDLLEKGERLPQPPI 235 (279)
T ss_pred CCHHHHHHHHhCCCCCCCCCC
Confidence 98888888887653 444544
No 239
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=2.5e-30 Score=280.69 Aligned_cols=221 Identities=23% Similarity=0.326 Sum_probs=183.5
Q ss_pred CCCccccccccccCcEEEEEEEEecCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~---~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.++|++.+.||+|+||.||++.+..+++ .||+|.+.... .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999877654 69999986542 344567789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++||||+++++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999997643 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~ 903 (931)
... ..........++..|+|||.+....++.++|||||||++|++++ |..||...+.
T Consensus 160 ~~~----------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSD----------------------PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred ccc----------------------cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 100 00000011112457999999998889999999999999999886 9999998888
Q ss_pred HHHHHHHHcC
Q 002356 904 QKTFANILHK 913 (931)
Q Consensus 904 ~~~~~~I~~~ 913 (931)
.++...+...
T Consensus 218 ~~~~~~i~~~ 227 (269)
T cd05065 218 QDVINAIEQD 227 (269)
T ss_pred HHHHHHHHcC
Confidence 8888887543
No 240
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.9e-30 Score=313.93 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+++.||+|+||.||++.+..+++.||||++.+...........+..|+.+++.++||||+++++++....++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999876555556667888999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
|||+.|++|.+++... ..+++..++.|+.||+.||.|||.+||+||||||+|||++.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 3489999999999999999999999999999999999999999999999999874
No 241
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=3.4e-30 Score=278.86 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=182.4
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccc---cChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+|++.+.||.|+||.||++.+ .+++.+|+|.+..... ........+.+|+.+++.++|+||+++++++...+.+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999986 5788999998865322 122344668899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
+|||+.|++|.+++.+. ..+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3489999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
. ...........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 H---------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred c---------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 0 0001112345689999999999988899999999999999999999999988766655
Q ss_pred HHHHHcC
Q 002356 907 FANILHK 913 (931)
Q Consensus 907 ~~~I~~~ 913 (931)
...+...
T Consensus 217 ~~~~~~~ 223 (265)
T cd06631 217 MFYIGAH 223 (265)
T ss_pred HHHhhhc
Confidence 5555544
No 242
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.1e-30 Score=283.81 Aligned_cols=205 Identities=28% Similarity=0.489 Sum_probs=179.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 34578999999999999999999999999999999886542 2344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+||||+++++|.+++... +.++...++.++.+++.+|.|||+ .|++|+||||+||+++.++.++|+|||++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~- 156 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN- 156 (284)
T ss_pred EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh-
Confidence 999999999999998764 348999999999999999999997 5999999999999999999999999998743210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 157 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~ 207 (284)
T cd06620 157 ----------------------------SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207 (284)
T ss_pred ----------------------------hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccch
Confidence 011234689999999999888889999999999999999999999986544
No 243
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=4.2e-30 Score=276.71 Aligned_cols=211 Identities=25% Similarity=0.370 Sum_probs=179.5
Q ss_pred ccccccCcEEEEEEEEec-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEecc
Q 002356 675 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~-~~--~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
+.||+|++|.||++.+.. ++ ..+|+|.+...... ...+.+.+|+.++++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999865 33 36999998775432 566788899999999999999999999988 8999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 002356 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (931)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (931)
++++|.+++..+....+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~----- 152 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED----- 152 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc-----
Confidence 999999999875434689999999999999999999999999999999999999999999999999865431110
Q ss_pred chhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q 002356 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (931)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I 910 (931)
.........++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..++.+.+
T Consensus 153 -------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 153 -------------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred -------------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 0111123457889999999998889999999999999999998 99999988888888877
Q ss_pred Hc
Q 002356 911 LH 912 (931)
Q Consensus 911 ~~ 912 (931)
..
T Consensus 214 ~~ 215 (257)
T cd05040 214 DK 215 (257)
T ss_pred Hh
Confidence 75
No 244
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=2.8e-30 Score=282.18 Aligned_cols=220 Identities=21% Similarity=0.324 Sum_probs=179.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+..++|++.+.||.|+||.||++.+..++. .+++|.+... ........+..|+.+++.++||||+++++++. .
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence 345689999999999999999999877766 4667766432 12334466778888999999999999999875 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...+++|||+.+|+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997643 45899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
..... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDK-------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCc-------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 21100 001123457788999999988889999999999999999998 9999998
Q ss_pred CCHHHHHHHHHcCC
Q 002356 901 KTRQKTFANILHKD 914 (931)
Q Consensus 901 ~~~~~~~~~I~~~~ 914 (931)
.....+.+.+.++.
T Consensus 215 ~~~~~~~~~~~~~~ 228 (279)
T cd05111 215 MRPHEVPDLLEKGE 228 (279)
T ss_pred CCHHHHHHHHHCCC
Confidence 88777766666554
No 245
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3e-30 Score=295.43 Aligned_cols=230 Identities=24% Similarity=0.332 Sum_probs=185.0
Q ss_pred ccccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 737 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 737 (931)
+.+..++|.+.+.||+|+||.||++.+. .+++.||+|++.... .......+.+|+.+|..+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4566778999999999999999999864 345789999997542 2233456889999999997 9999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCCC----------------------------------------------------
Q 002356 738 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 765 (931)
Q Consensus 738 ~~~~~~~~lVmE~~~ggsL~~~l~~~~~---------------------------------------------------- 765 (931)
+...+.+|+|||||.+|+|.+++.....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999975321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 766 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 766 --------------------------------------------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
..++...+..++.||+.||.|||++||+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 236777889999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
||++.++.+||+|||++........ ........+++.|+|||.+.+..++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999854321100 011123457889999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC--CCCCCC
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKD--LKFPSS 920 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~--~~~p~~ 920 (931)
|||||++|+|++ |..||......+.+...+.+. +.+|..
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~ 366 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAH 366 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCC
Confidence 999999999998 899998766655555544433 344443
No 246
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=2.5e-30 Score=283.68 Aligned_cols=229 Identities=22% Similarity=0.344 Sum_probs=188.7
Q ss_pred cCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999998753 57899999987542 233456788899999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 742 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~--------------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
...++||||+.+++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997431 1237788899999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
|+++.++.++|+|||++....... .........+++.|+|||.+.+..++.++|+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSAD-------------------------YYKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCc-------------------------cccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 999999999999999985432110 0011122234678999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCc
Q 002356 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL-KFPSSTP 922 (931)
Q Consensus 882 wSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~~-~~p~~~~ 922 (931)
|||||++|+|++ |..||.+.+..++...+..+.. ..|...+
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCP 258 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 999999999997 8899998888888888887754 3454443
No 247
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.3e-30 Score=290.49 Aligned_cols=233 Identities=22% Similarity=0.337 Sum_probs=189.9
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccce
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l 734 (931)
.+.+...+|++.+.||+|+||.||+|++... ...+|+|.+... ........+.+|+.+++++ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 4456677899999999999999999987432 236899987653 2334567788999999999 89999999
Q ss_pred eEEEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q 002356 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (931)
Q Consensus 735 ~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~ 800 (931)
++++...+.+|++|||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999997532 234778888999999999999999999999999999
Q ss_pred cEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhh
Q 002356 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (931)
Q Consensus 801 NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D 880 (931)
|||++.++.+||+|||+++....... ........++..|+|||++.+..++.++|
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhh
Confidence 99999999999999999864321100 00111223457899999999988999999
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCc
Q 002356 881 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKD-LKFPSSTP 922 (931)
Q Consensus 881 iwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~ 922 (931)
||||||++|+|++ |..||.+.+..+.+..+..+. ...|...+
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT 262 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 9999999999998 899999999888888887653 34554433
No 248
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=4.1e-30 Score=278.56 Aligned_cols=217 Identities=27% Similarity=0.393 Sum_probs=180.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 744 (931)
..|++.+.||+|+||.||++.+..++..||+|.+...... .......+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4699999999999999999999999999999988654321 23345678899999999999999999998875 4678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
+++|||+++++|.+++... ..++...++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999999999764 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.. .........|+..|+|||.+.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~ 215 (266)
T cd06651 160 CM------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM 215 (266)
T ss_pred cc------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH
Confidence 00 000112345889999999999888899999999999999999999999877655
Q ss_pred HHHHHHH
Q 002356 905 KTFANIL 911 (931)
Q Consensus 905 ~~~~~I~ 911 (931)
+.+.++.
T Consensus 216 ~~~~~~~ 222 (266)
T cd06651 216 AAIFKIA 222 (266)
T ss_pred HHHHHHh
Confidence 5554443
No 249
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=2.7e-30 Score=281.20 Aligned_cols=227 Identities=21% Similarity=0.329 Sum_probs=189.7
Q ss_pred cCCCccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
...+|++.+.||.|+||.||++.... +.+.+++|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 34689999999999999999999754 35689999876431 223456788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEe
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTK-------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~-------~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~D 814 (931)
+..|+||||+++++|.+++...... .+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999999999765411 589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-
Q 002356 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (931)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~- 893 (931)
||++...... .........+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 161 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 161 LSLSKDVYNS--------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred cccccccCcc--------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 9987432100 0111223456788999999988888899999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 002356 894 GYTPFRGKTRQKTFANILHKDLKFPSST 921 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~~~~~p~~~ 921 (931)
|..||.......++..+..+.+.++...
T Consensus 215 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 242 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQAGKLELPVPE 242 (275)
T ss_pred CCCCccccchHHHHHHHHcCCcCCCCCC
Confidence 8999998888888888887776665433
No 250
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.7e-30 Score=284.55 Aligned_cols=210 Identities=32% Similarity=0.499 Sum_probs=177.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++++.||+|+||.||++.+..++..||+|.+... ........+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 4799999999999999999999989999999988653 13344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 749 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--- 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--- 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---
Confidence 9999999999887531 2358999999999999999999997 5999999999999999999999999998854311
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC------CCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~------~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.......|++.|+|||.+.+.. ++.++|+|||||++|+|++|+.||..
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 156 --------------------------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred --------------------------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 0112345888999999985543 47799999999999999999999987
Q ss_pred CCHHHHHHH
Q 002356 901 KTRQKTFAN 909 (931)
Q Consensus 901 ~~~~~~~~~ 909 (931)
......+..
T Consensus 210 ~~~~~~~~~ 218 (286)
T cd06622 210 ETYANIFAQ 218 (286)
T ss_pred cchhhHHHH
Confidence 655544443
No 251
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.1e-30 Score=282.17 Aligned_cols=246 Identities=35% Similarity=0.610 Sum_probs=201.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 747 (931)
++|.+.+.||+|+||.||++.+..++..||+|++.+...........+..|..+++.+. ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998754444455677889999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+.+++|.+++.... .++...++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999998753 5999999999999999999999999999999999999999999999999998654322110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........ .................|+..|+|||.+....++.++|+||||+++|++++|..||...+....+
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDAT-------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCCc-------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00000000 00000011123344567899999999998888889999999999999999999999988888888
Q ss_pred HHHHcCCCCCCCCCcC
Q 002356 908 ANILHKDLKFPSSTPR 923 (931)
Q Consensus 908 ~~I~~~~~~~p~~~~~ 923 (931)
+.+......+|...+.
T Consensus 232 ~~~~~~~~~~~~~~~~ 247 (280)
T cd05581 232 QKILKLEYSFPPNFPP 247 (280)
T ss_pred HHHHhcCCCCCCccCH
Confidence 8888777777766543
No 252
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=4.3e-30 Score=277.20 Aligned_cols=222 Identities=23% Similarity=0.351 Sum_probs=179.6
Q ss_pred cccccCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCC
Q 002356 676 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~g 753 (931)
.||+|+||.||++.+. ..+..+|+|++.... .......+.+|+.++++++||||+++++++. ....++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 3899999999999765 445679999986542 2344567889999999999999999999875 4578999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.........
T Consensus 79 ~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~------ 151 (257)
T cd05115 79 GPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY------ 151 (257)
T ss_pred CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc------
Confidence 99999987542 45899999999999999999999999999999999999999999999999998543211100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHc
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~ 912 (931)
........+++.|+|||.+....++.++|||||||++|++++ |..||......++...+.+
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 152 ------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred ------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 000111224578999999988889999999999999999996 9999999888888888777
Q ss_pred CC-CCCCCCCcCCh
Q 002356 913 KD-LKFPSSTPRSK 925 (931)
Q Consensus 913 ~~-~~~p~~~~~~~ 925 (931)
+. ..+|...+.+.
T Consensus 214 ~~~~~~~~~~~~~l 227 (257)
T cd05115 214 GKRLDCPAECPPEM 227 (257)
T ss_pred CCCCCCCCCCCHHH
Confidence 54 45665555443
No 253
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=3.8e-30 Score=280.70 Aligned_cols=212 Identities=29% Similarity=0.434 Sum_probs=183.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|+..+.||.|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++.....+|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 36889999999999999999999899999999987542 2345677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.|++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 999999999998653 48899999999999999999999999999999999999999999999999985432100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......++..|+|||++.+..++.++|+|||||++|+|++|++||...+......
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 01123458889999999988889999999999999999999999998877666665
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.+..
T Consensus 212 ~~~~ 215 (277)
T cd06640 212 LIPK 215 (277)
T ss_pred hhhc
Confidence 5543
No 254
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=1e-30 Score=285.90 Aligned_cols=212 Identities=23% Similarity=0.409 Sum_probs=175.9
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58899999999999999999999999999999875422 22333567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+. ++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~----- 152 (284)
T cd07839 80 YCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP----- 152 (284)
T ss_pred cCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-----
Confidence 995 68888876542 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCC-CCCCHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTF 907 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf-~~~~~~~~~ 907 (931)
........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+.+
T Consensus 153 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 153 ----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred ----------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 0111234578899999998764 4688999999999999999988774 556655655
Q ss_pred HHHH
Q 002356 908 ANIL 911 (931)
Q Consensus 908 ~~I~ 911 (931)
+.+.
T Consensus 211 ~~~~ 214 (284)
T cd07839 211 KRIF 214 (284)
T ss_pred HHHH
Confidence 5553
No 255
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=3e-30 Score=282.31 Aligned_cols=214 Identities=28% Similarity=0.474 Sum_probs=183.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++......|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999999999999999876532 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987543 5599999999999999999999999999999999999999999999999999854421100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|+..|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 112234689999999998654 45889999999999999999999999888777776
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.++.
T Consensus 212 ~~~~ 215 (286)
T cd07832 212 IVFR 215 (286)
T ss_pred HHHH
Confidence 6654
No 256
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=3.3e-30 Score=281.75 Aligned_cols=214 Identities=29% Similarity=0.452 Sum_probs=178.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEE------e
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ------T 740 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~------~ 740 (931)
.+.|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++.+ +||||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 46899999999999999999999999999999998653 23345678899999988 7999999999985 3
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...+|++|||+.+++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 56889999999999999999876555689999999999999999999999999999999999999999999999999853
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
.... ........|++.|+|||.+. ...++.++|+|||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3110 01123456899999999985 345778999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
.||........+..+..
T Consensus 224 ~p~~~~~~~~~~~~~~~ 240 (282)
T cd06636 224 PPLCDMHPMRALFLIPR 240 (282)
T ss_pred CCccccCHHhhhhhHhh
Confidence 99987665544444433
No 257
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=3.7e-30 Score=278.28 Aligned_cols=221 Identities=28% Similarity=0.427 Sum_probs=188.3
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..++..+|+|++...... .....+.+|+.+++.++|+||+++++.+......|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4799999999999999999999889999999998754322 25677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|++++++|.+++..... ..+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976422 45899999999999999999999999999999999999999999999999998654321110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.........|++.|+|||++... .++.++|+|||||++|+|++|+.||...+..+.
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00122345689999999998776 788899999999999999999999998877777
Q ss_pred HHHHHcCC
Q 002356 907 FANILHKD 914 (931)
Q Consensus 907 ~~~I~~~~ 914 (931)
+.++..+.
T Consensus 216 ~~~~~~~~ 223 (267)
T cd06610 216 LMLTLQND 223 (267)
T ss_pred HHHHhcCC
Confidence 76666553
No 258
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=3.3e-30 Score=290.34 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=176.6
Q ss_pred ccCCCccccccccccCcEEEEEEEEe-----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~-----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (931)
+..++|++.+.||.|+||.||+|.+. .+++.||||.+.... .......+.+|+.+|..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 45678999999999999999999853 467899999987542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002356 740 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (931)
Q Consensus 740 ~-~~~~~lVmE~~~ggsL~~~l~~~~------------------------------------------------------ 764 (931)
. +..++++||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 456899999999999999986531
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 765 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 765 -----------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-------
Confidence 12367788889999999999999999999999999999999999999999999854321100
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHHHHH
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ-KTFANIL 911 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~-~~~~~I~ 911 (931)
........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.... .....+.
T Consensus 235 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 235 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred ------------------hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 011122346678999999988889999999999999999996 99999875543 3444444
Q ss_pred cC
Q 002356 912 HK 913 (931)
Q Consensus 912 ~~ 913 (931)
++
T Consensus 297 ~~ 298 (343)
T cd05103 297 EG 298 (343)
T ss_pred cc
Confidence 43
No 259
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=6.4e-30 Score=280.87 Aligned_cols=217 Identities=22% Similarity=0.329 Sum_probs=180.1
Q ss_pred CccccccccccCcEEEEEEEEec-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~-----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+|++.+.||+|+||.||++.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 48899999999999999998753 23578999886542 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 745 CLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
+++|||+.+++|.+++.... ...++...+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999999999986421 13478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
|++.++.+||+|||++........ ........++..|+|||.+.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 999999999999999854321100 0011123456789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC
Q 002356 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 883 SlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~ 913 (931)
||||++|+|++ |..||.+....++.+.+.++
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 245 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG 245 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence 99999999998 99999988888877766554
No 260
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=3.5e-30 Score=277.05 Aligned_cols=210 Identities=21% Similarity=0.359 Sum_probs=179.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+..++|++.+.||+|+||.||++.. +++.||+|.+... .....+.+|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 74 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD-----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLY 74 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCc-----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcE
Confidence 3456899999999999999999875 7788999988643 1335678899999999999999999988654 579
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+.+++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999999998765556899999999999999999999999999999999999999999999999988432100
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
......+..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+..
T Consensus 154 -----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 204 (254)
T cd05083 154 -----------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204 (254)
T ss_pred -----------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 011234568999999988889999999999999999997 99999998888
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
+....+.++
T Consensus 205 ~~~~~~~~~ 213 (254)
T cd05083 205 EVKECVEKG 213 (254)
T ss_pred HHHHHHhCC
Confidence 888777665
No 261
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=3e-30 Score=283.44 Aligned_cols=212 Identities=26% Similarity=0.422 Sum_probs=176.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|++.+.||.|++|.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...++.|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999988999999999875422 11223466899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+. ++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 99996 59999887653 358999999999999999999999999999999999999999999999999985321100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC-HHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 905 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-~~~ 905 (931)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. ..+
T Consensus 158 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 158 -------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred -------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 01112346889999999875 457889999999999999999999998665 344
Q ss_pred HHHHH
Q 002356 906 TFANI 910 (931)
Q Consensus 906 ~~~~I 910 (931)
.+..+
T Consensus 213 ~~~~~ 217 (291)
T cd07844 213 QLHKI 217 (291)
T ss_pred HHHHH
Confidence 44333
No 262
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=7e-30 Score=275.18 Aligned_cols=218 Identities=23% Similarity=0.350 Sum_probs=178.8
Q ss_pred ccccccCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEecc
Q 002356 675 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~---~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
+.||+|+||.||++....++ ..+|+|.+...... .....+.+|+.+++.++||||+++++++. .+.+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46899999999999876554 78999998765332 45567889999999999999999999776 45689999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 002356 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (931)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (931)
.+++|.+++.... .+++..+..++.|++.||.|||.+|++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999998754 5899999999999999999999999999999999999999999999999998644211100
Q ss_pred chhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q 002356 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (931)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I 910 (931)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..++...+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 001111234568999999998889999999999999999997 99999988888888777
Q ss_pred HcCC-CCCCCCC
Q 002356 911 LHKD-LKFPSST 921 (931)
Q Consensus 911 ~~~~-~~~p~~~ 921 (931)
..+. +..|...
T Consensus 212 ~~~~~~~~~~~~ 223 (257)
T cd05060 212 ESGERLPRPEEC 223 (257)
T ss_pred HcCCcCCCCCCC
Confidence 6653 3444443
No 263
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=5.8e-30 Score=277.79 Aligned_cols=212 Identities=20% Similarity=0.314 Sum_probs=169.4
Q ss_pred ccccccCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~--~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
+.||+|+||.||++.... ....+|+|.+.... .......+.+|+.+++.++||||+++++++.....+|+||||+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999996533 34578888775432 23344567889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 753 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 753 ggsL~~~l~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
+++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---- 154 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED---- 154 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch----
Confidence 9999999976432 235678889999999999999999999999999999999999999999999985321100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.........+++.|+|||++.. ..++.++|||||||++|+|++ |..||...
T Consensus 155 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 155 ---------------------YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ---------------------heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 0011123346778999999743 356779999999999999998 89999888
Q ss_pred CHHHHHHHHHcC
Q 002356 902 TRQKTFANILHK 913 (931)
Q Consensus 902 ~~~~~~~~I~~~ 913 (931)
...+.+..+...
T Consensus 214 ~~~~~~~~~~~~ 225 (269)
T cd05042 214 SDEQVLKQVVRE 225 (269)
T ss_pred CHHHHHHHHhhc
Confidence 777776666543
No 264
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=283.87 Aligned_cols=243 Identities=30% Similarity=0.478 Sum_probs=197.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccc----cChHHHHHHHHHHHHHHhcCCCCccceeEEEE-e
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM----LNRNKVHRACAEREILDMLDHPFVPALYASFQ-T 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~----~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~ 740 (931)
...++|-++++||+|||+.||++.+....+++|||+-..... ......+...+|..|-+.|+||.||++|++|. +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 446799999999999999999999999999999997543211 01122355678999999999999999999996 5
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCCCcEEEec---CCcEEEEec
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDF 815 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--gIiHrDIKP~NIll~~---~g~vkL~DF 815 (931)
.+.+|-|+|||+|.+|.-+|+.. +.+++.+++.|+.||+.||.||.+. -|||-||||.|||+.. -|.+||+||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 57789999999999999999865 5699999999999999999999987 5999999999999963 467999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC----CCCChhhHHHHHHHHHHH
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEM 891 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~el 891 (931)
|++.++...... ..+....+.-..||.+|++||.+.-. ..+.++||||.|||+|.+
T Consensus 618 GLSKIMdddSy~--------------------~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQC 677 (775)
T KOG1151|consen 618 GLSKIMDDDSYN--------------------SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQC 677 (775)
T ss_pred chhhhccCCccC--------------------cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhh
Confidence 999887643321 11233456677899999999998543 457799999999999999
Q ss_pred HcCCCCCCCC-CHHHHHH--HHHc-CCCCCCCCCcCChhhhhc
Q 002356 892 LYGYTPFRGK-TRQKTFA--NILH-KDLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 892 l~G~~Pf~~~-~~~~~~~--~I~~-~~~~~p~~~~~~~~~~~~ 930 (931)
++|+-||... +..++++ .|++ ...+||+-+-.+.++-.|
T Consensus 678 lYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaF 720 (775)
T KOG1151|consen 678 LYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAF 720 (775)
T ss_pred hccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHH
Confidence 9999999864 3334443 4554 457999999888887665
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=2.5e-30 Score=282.04 Aligned_cols=212 Identities=28% Similarity=0.427 Sum_probs=181.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|+..+.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 46888999999999999999998899999999987542 2334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999998864 348999999999999999999999999999999999999999999999999985432100
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||..........
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 01123468899999999998889999999999999999999999998766655555
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.+..
T Consensus 212 ~~~~ 215 (277)
T cd06642 212 LIPK 215 (277)
T ss_pred hhhc
Confidence 5443
No 266
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=3.2e-30 Score=283.76 Aligned_cols=211 Identities=27% Similarity=0.481 Sum_probs=181.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
+.|.....||.|+||.||++.+..++..||+|.+... .......+.+|+.+++.++||||+++++.+...++.|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 4566678899999999999999889999999988653 2344566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---- 171 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---- 171 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc----
Confidence 99999999998854 24899999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........|++.|+|||.+.+..++.++|+||||+++|+|++|+.||.+.+..+.+.
T Consensus 172 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 228 (292)
T cd06658 172 -----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR 228 (292)
T ss_pred -----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223568999999999988889999999999999999999999999888777666
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
.+..
T Consensus 229 ~~~~ 232 (292)
T cd06658 229 RIRD 232 (292)
T ss_pred HHHh
Confidence 6554
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=3.7e-30 Score=283.98 Aligned_cols=212 Identities=28% Similarity=0.469 Sum_probs=181.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|.....||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 45666778999999999999998899999999986542 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|..++.. ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999998765 34899999999999999999999999999999999999999999999999988432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+..+.+.
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999998889999999999999999999999998887777776
Q ss_pred HHHcC
Q 002356 909 NILHK 913 (931)
Q Consensus 909 ~I~~~ 913 (931)
.+...
T Consensus 228 ~~~~~ 232 (297)
T cd06659 228 RLRDS 232 (297)
T ss_pred HHhcc
Confidence 66544
No 268
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=3.3e-30 Score=279.13 Aligned_cols=208 Identities=23% Similarity=0.403 Sum_probs=176.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc---ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+|+..+.||+|+||.||++.+..+++.+|+|++...... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 488889999999999999999999999999998754321 12345778899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~~ 825 (931)
||||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 3589999999999999999999999999999999999998776 69999999985543110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||....
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 212 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK 212 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 0 00011234568999999999988888999999999999999999999997544
No 269
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=6.3e-30 Score=275.71 Aligned_cols=223 Identities=26% Similarity=0.502 Sum_probs=189.5
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE--eCCeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV 747 (931)
+|++.+.||.|+||.||++.+..++..||+|.+..... .......+..|+.+++.++||||+++++++. .....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999999999999999999876533 3445677889999999999999999999775 35678999
Q ss_pred EeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH-----~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998753 2345899999999999999999999 89999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
..... .......|++.|+|||++....++.++|+||||+++|+|++|+.||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 32110 011234689999999999988889999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCC-CCCCC
Q 002356 901 KTRQKTFANILHKDL-KFPSS 920 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~-~~p~~ 920 (931)
.+..++.+.+.++.+ .+|..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd08217 213 RNQLQLASKIKEGKFRRIPYR 233 (265)
T ss_pred cCHHHHHHHHhcCCCCCCccc
Confidence 888888888877764 34433
No 270
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=6.5e-30 Score=277.77 Aligned_cols=215 Identities=25% Similarity=0.371 Sum_probs=177.2
Q ss_pred cccccCcEEEEEEEEecCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEEEeccC
Q 002356 676 PLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~~~--~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
.||+|+||.||++.+..++. .+++|.++.. ........+.+|+.+++++ +||||+++++++...+.+|+||||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999987765 4688877642 2334556788999999999 89999999999999999999999999
Q ss_pred CCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 753 GGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 753 ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
+++|.+++..+. ...++...++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997532 124789999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~P 897 (931)
...... ........++.|+|||++....++.++|+|||||++|+|++ |..|
T Consensus 160 ~~~~~~----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~p 211 (270)
T cd05047 160 RGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 211 (270)
T ss_pred cccchh----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 421100 00011224567999999988889999999999999999996 9999
Q ss_pred CCCCCHHHHHHHHHcCC-CCCCCC
Q 002356 898 FRGKTRQKTFANILHKD-LKFPSS 920 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~-~~~p~~ 920 (931)
|.+.+..+.++.+..+. +..|..
T Consensus 212 f~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
T cd05047 212 YCGMTCAELYEKLPQGYRLEKPLN 235 (270)
T ss_pred ccccCHHHHHHHHhCCCCCCCCCc
Confidence 99888888888876652 344443
No 271
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=3.3e-30 Score=283.88 Aligned_cols=218 Identities=24% Similarity=0.358 Sum_probs=180.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecC--------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCcc
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~--------------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (931)
..++|.+.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+++++.++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 356899999999999999999987543 2358999987542 234556788999999999999999
Q ss_pred ceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQPT----------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 733 ~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~----------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
++++++...+..++||||+.+++|.+++..... ..++...+..++.|++.||.|||++|++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 999999999999999999999999999865321 1367888999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
+++.++.+||+|||++....... .........+++.|+|||++....++.++|+|
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 215 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVW 215 (295)
T ss_pred EEcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHH
Confidence 99999999999999985432100 01112234567899999999988899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCCHHHHHHHHH
Q 002356 883 ALGILLYEMLY--GYTPFRGKTRQKTFANIL 911 (931)
Q Consensus 883 SlGvil~ell~--G~~Pf~~~~~~~~~~~I~ 911 (931)
||||++|+|++ |..||...+..+++..+.
T Consensus 216 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~ 246 (295)
T cd05097 216 AFGVTLWEMFTLCKEQPYSLLSDEQVIENTG 246 (295)
T ss_pred HHHHHHHHHHHcCCCCCCcccChHHHHHHHH
Confidence 99999999987 788998887777766553
No 272
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=8.1e-30 Score=273.99 Aligned_cols=209 Identities=29% Similarity=0.479 Sum_probs=181.6
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++||||+++++++......|++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999986542 2678889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.+++|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~---- 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT---- 152 (256)
T ss_pred ecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC----
Confidence 9999999999997543 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
........|+..|+|||++.+..++.++||||||+++|+|++|+.||...+..+...
T Consensus 153 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 153 -----------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred -----------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 011223458889999999998889999999999999999999999998766554443
Q ss_pred HH
Q 002356 909 NI 910 (931)
Q Consensus 909 ~I 910 (931)
.+
T Consensus 210 ~~ 211 (256)
T cd06612 210 MI 211 (256)
T ss_pred hh
Confidence 33
No 273
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=4e-30 Score=283.39 Aligned_cols=214 Identities=27% Similarity=0.404 Sum_probs=181.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
+|++.+.||.|+||.||++.+..+++.||+|.+...... .......+..|+.+++.++|+||+++++++...+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999999989999999999765432 122345567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+ +++|.+++.... ..+++..+..++.||++||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997653 359999999999999999999999999999999999999999999999999986542110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.......+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..+.
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356889999999865 4567899999999999999999999998887777
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
+.++..
T Consensus 212 ~~~~~~ 217 (298)
T cd07841 212 LGKIFE 217 (298)
T ss_pred HHHHHH
Confidence 766653
No 274
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=4.2e-30 Score=290.71 Aligned_cols=211 Identities=27% Similarity=0.490 Sum_probs=179.6
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 578999999999999999999999999999999986542 2334456677899999999999999999988643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+||||+ +++|.+.+... ++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887643 889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 210 0112346889999999999999999999999999999999999999988
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+....+.++.+
T Consensus 221 ~~~~~~~~~~~ 231 (353)
T cd07850 221 DHIDQWNKIIE 231 (353)
T ss_pred CHHHHHHHHHH
Confidence 77666666543
No 275
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=6.9e-30 Score=281.51 Aligned_cols=216 Identities=26% Similarity=0.389 Sum_probs=178.4
Q ss_pred CCCccccccccccCcEEEEEEEEec----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCc
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~----------------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (931)
.++|++.+.||+|+||.||++.+.. +...+|+|.+.... .......+.+|+.+|+.++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 4579999999999999999986532 34579999987542 33455678899999999999999
Q ss_pred cceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q 002356 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (931)
Q Consensus 732 v~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~---------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NI 802 (931)
+++++++...+.+++||||+.+++|.+++..... ..++...+..++.||+.||.|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999876421 2367788999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHH
Q 002356 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (931)
Q Consensus 803 ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Diw 882 (931)
|++.++.++|+|||++....... .........+++.|++||+.....++.++|+|
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc-------------------------ceeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 99999999999999985432110 00111233456789999999888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCCHHHHHHHH
Q 002356 883 ALGILLYEMLY--GYTPFRGKTRQKTFANI 910 (931)
Q Consensus 883 SlGvil~ell~--G~~Pf~~~~~~~~~~~I 910 (931)
||||++|+|++ |..||...+..+.+..+
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~ 246 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENT 246 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 99999999997 88999887776666544
No 276
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=2.8e-30 Score=282.63 Aligned_cols=213 Identities=29% Similarity=0.411 Sum_probs=179.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+.+.... ......+.+|+++++.++||||+++++++......|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 4799999999999999999999889999999998764322 234456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+++++|..+.... ..++...++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~---- 153 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---- 153 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC----
Confidence 999999998876553 34899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........++..|+|||++.+. .++.++|||||||++|+|++|++||...+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 154 -----------------------GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred -----------------------ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 0111234688999999998753 4678999999999999999999999877766555
Q ss_pred HHHH
Q 002356 908 ANIL 911 (931)
Q Consensus 908 ~~I~ 911 (931)
..+.
T Consensus 211 ~~~~ 214 (286)
T cd07846 211 YHII 214 (286)
T ss_pred HHHH
Confidence 5544
No 277
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.7e-30 Score=294.22 Aligned_cols=195 Identities=27% Similarity=0.421 Sum_probs=167.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
...+|.+++.||+|+||.||++.+..++..||+|+..+. ....|+.+++.++||||+++++++......++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999975443 23468999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|||++ .++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 678888886543 45899999999999999999999999999999999999999999999999998532100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.......||+.|+|||++.+..++.++|||||||++|+|++ +.++|..
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~ 259 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFED 259 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccC
Confidence 01123569999999999999999999999999999999997 4555543
No 278
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=1.3e-29 Score=271.67 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=179.1
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||+|+||.||++.. .++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..++||||+.++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 467899999886542 2334456888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999987543 348899999999999999999999999999999999999999999999999985321100
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........+++.|+|||++....++.++||||||+++|++++ |..||.+.........+..+
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 000112234678999999988888999999999999999998 99999988888887777765
Q ss_pred C-CCCCCCC
Q 002356 914 D-LKFPSST 921 (931)
Q Consensus 914 ~-~~~p~~~ 921 (931)
. ..+|...
T Consensus 211 ~~~~~~~~~ 219 (250)
T cd05085 211 YRMSCPQKC 219 (250)
T ss_pred CCCCCCCCC
Confidence 3 3444433
No 279
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=283.51 Aligned_cols=219 Identities=23% Similarity=0.372 Sum_probs=185.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC--CC----CccceeEEEEeC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HP----FVPALYASFQTK 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp----nIv~l~~~~~~~ 741 (931)
..+|.+++.||+|.||+|-.|.+..++..+|+|+++.- ....+...-|+++|+++. .| -+|++.++|+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 67999999999999999999999999999999988642 123345567999999993 23 468888999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---------------
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--------------- 806 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~--------------- 806 (931)
++.|||+|.+ |.|+++++..+....++...++.+++||+++++|||+++++|.||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999999 889999999988888999999999999999999999999999999999999942
Q ss_pred -----CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhH
Q 002356 807 -----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (931)
Q Consensus 807 -----~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~Di 881 (931)
+..|+|+|||.|+... ....+.+.|..|.|||++.+-+++.++||
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred eccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccCc
Confidence 2248899999985432 12256789999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 002356 882 WALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSST 921 (931)
Q Consensus 882 wSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~~p~~~ 921 (931)
||+||||+|+++|...|++.+..+.+..+..-..++|..+
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~m 332 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRM 332 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHH
Confidence 9999999999999999998877775544443333666544
No 280
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=4.9e-31 Score=311.61 Aligned_cols=239 Identities=28% Similarity=0.422 Sum_probs=187.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------ 740 (931)
...+|+.+..||+||||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+|||||++|..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 4678999999999999999999999999999999987653 45666788999999999999999999842210
Q ss_pred --------------------------------------------------------------------------------
Q 002356 741 -------------------------------------------------------------------------------- 740 (931)
Q Consensus 741 -------------------------------------------------------------------------------- 740 (931)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002356 741 -------------------------K--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 787 (931)
Q Consensus 741 -------------------------~--------~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L 787 (931)
+ ..+||-||||+..+|.+++..+.... .....+.+++||++||.|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 0 13689999999999999988753211 4788999999999999999
Q ss_pred HHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccch
Q 002356 788 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAP 867 (931)
Q Consensus 788 H~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aP 867 (931)
|++|||||||||.||+++.++.|||+|||+|+...-.. ..-.............+.....+.+||.-|+||
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~---------~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENL---------ESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhh---------hhHhhccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999999999996521000 000000000001111112245678999999999
Q ss_pred hhhcCCC---CCChhhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCCCCCCCC
Q 002356 868 EIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 868 E~~~~~~---~~~~~DiwSlGvil~ell~G~~Pf~~-~~~~~~~~~I~~~~~~~p~~ 920 (931)
|++.+.. |+.|+|+||||++++||++ ||.. +.+..++.++.++.+++|++
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~ 838 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPAD 838 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcc
Confidence 9997654 8999999999999999985 5874 67788999999999888843
No 281
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=8.5e-30 Score=274.10 Aligned_cols=214 Identities=22% Similarity=0.385 Sum_probs=181.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
..+|++.+.||.|+||.||++.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++++......++|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 468999999999999999999885 467899998865432 234678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+.+++|.+++.... ..+++..++.++.|++.+|+|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987643 348899999999999999999999999999999999999999999999999885432100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~ 906 (931)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||......++
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112335678999999988889999999999999999998 9999998888888
Q ss_pred HHHHHcC
Q 002356 907 FANILHK 913 (931)
Q Consensus 907 ~~~I~~~ 913 (931)
++.+.++
T Consensus 211 ~~~~~~~ 217 (256)
T cd05112 211 VETINAG 217 (256)
T ss_pred HHHHhCC
Confidence 8887765
No 282
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=8.7e-30 Score=276.55 Aligned_cols=228 Identities=24% Similarity=0.359 Sum_probs=186.2
Q ss_pred cCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
...+|++.+.||.|+||.||++.+... ...+|+|...... .....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 456799999999999999999987544 4579999876542 23455678899999999999999999998875 55
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~ 823 (931)
.|+||||+++++|.+++.... ..++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3489999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
.. ........+++.|+|||.+....++.++|||||||++|++++ |..||.+.+
T Consensus 160 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ES--------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred cc--------------------------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 001112235678999999988889999999999999999985 999999988
Q ss_pred HHHHHHHHHcCC-CCCCCCCcCC
Q 002356 903 RQKTFANILHKD-LKFPSSTPRS 924 (931)
Q Consensus 903 ~~~~~~~I~~~~-~~~p~~~~~~ 924 (931)
..+....+.++. +..|...+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05056 214 NNDVIGRIENGERLPMPPNCPPT 236 (270)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHH
Confidence 888887777653 4555554433
No 283
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=7.3e-30 Score=281.24 Aligned_cols=232 Identities=18% Similarity=0.192 Sum_probs=172.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhcCCCCccce
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPAL 734 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hpnIv~l 734 (931)
+..++|++.+.||+|+||.||++.+..+ +..+|+|+........... ......+...+..++|++|+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4557899999999999999999999877 6778888654321110000 0112233344566789999999
Q ss_pred eEEEEeCC----eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcE
Q 002356 735 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (931)
Q Consensus 735 ~~~~~~~~----~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~v 810 (931)
++++.... +.+++|+++ ..++.+.+... ...++..++.++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98765443 457889988 56777777653 236788899999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHH
Q 002356 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (931)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 890 (931)
+|+|||+|+......... ...........||+.|+|||++.+..++.++|||||||+||+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999996543211100 000111234579999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCH---------HHHHHHHHcCCCCCCCC
Q 002356 891 MLYGYTPFRGKTR---------QKTFANILHKDLKFPSS 920 (931)
Q Consensus 891 ll~G~~Pf~~~~~---------~~~~~~I~~~~~~~p~~ 920 (931)
|++|++||.+.+. .+.+.++.++.+.+|..
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNA 264 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCC
Confidence 9999999987632 23445566666655543
No 284
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=9.4e-30 Score=279.99 Aligned_cols=214 Identities=22% Similarity=0.360 Sum_probs=178.8
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++....+.|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999998865422 2233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||+ +++|.+++.......+++..++.++.||+.||+|||++||+|+||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 999 568888887655545788999999999999999999999999999999999985 5579999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.......|++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+.
T Consensus 158 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 158 -------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred -------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111233578899999998664 578899999999999999999999998877666
Q ss_pred HHHHH
Q 002356 907 FANIL 911 (931)
Q Consensus 907 ~~~I~ 911 (931)
+.++.
T Consensus 213 ~~~~~ 217 (294)
T PLN00009 213 LFKIF 217 (294)
T ss_pred HHHHH
Confidence 66554
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=1.3e-29 Score=272.60 Aligned_cols=213 Identities=29% Similarity=0.454 Sum_probs=182.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
+|+..+.||+|+||.||++.+..++..|++|.+..... ........+.+|+.+++.++||||+++++++.....+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47888999999999999999988999999999865432 1234567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~--- 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF--- 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc---
Confidence 9999999999999765 34889999999999999999999999999999999999999999999999988543210
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.......|++.|++||.+.... ++.++|+|||||++|+|++|+.||......+.
T Consensus 156 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 156 -------------------------SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred -------------------------ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 0122456889999999997766 88899999999999999999999987665555
Q ss_pred HHHHHc
Q 002356 907 FANILH 912 (931)
Q Consensus 907 ~~~I~~ 912 (931)
...+..
T Consensus 211 ~~~~~~ 216 (258)
T cd06632 211 VFKIGR 216 (258)
T ss_pred HHHHHh
Confidence 555544
No 286
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=9e-30 Score=276.29 Aligned_cols=215 Identities=30% Similarity=0.479 Sum_probs=180.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC-----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 741 (931)
.++|++.+.||.|+||.||++.+..+++.|++|++.... .....+.+|+.+++.+ +|+||+++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 478999999999999999999999899999999987642 2346788999999999 799999999999754
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 742 -THVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
..+|+||||+.+++|.+++.... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 45899999999999999987532 356899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHc
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~ 893 (931)
...... ........|++.|+|||++.. ..++.++|||||||+||+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 543210 011123468999999999854 346678999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcC
Q 002356 894 GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~ 913 (931)
|++||...+....+.++.++
T Consensus 214 g~~p~~~~~~~~~~~~~~~~ 233 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRN 233 (275)
T ss_pred CCCCccccchHHHHHHhhcc
Confidence 99999877766666666654
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=1.1e-29 Score=272.88 Aligned_cols=217 Identities=25% Similarity=0.380 Sum_probs=185.1
Q ss_pred ccccccccccCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
+++.+.||.|+||.||++.+..++ ..+|+|.+.... .......+..|+.+++.++|+||+++++++...+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 467789999999999999998766 899999986542 22256788899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
+|||+.+++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999865433389999999999999999999999999999999999999999999999999854421100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~ 905 (931)
.......+++.|+|||.+....++.++|+|||||++|+|++ |.+||...+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 --------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred --------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00001226789999999988888999999999999999998 899999988888
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
+++.+.++..
T Consensus 213 ~~~~~~~~~~ 222 (258)
T smart00219 213 VLEYLKKGYR 222 (258)
T ss_pred HHHHHhcCCC
Confidence 8888877653
No 288
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=9.3e-30 Score=273.65 Aligned_cols=218 Identities=26% Similarity=0.470 Sum_probs=186.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++++...+..|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58899999999999999999999999999999876432 22344667889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~~~~~ 828 (931)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++ .++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 99999999999875555689999999999999999999999999999999999999876 46999999885432110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|++.|+|||++....++.++|+|||||++|+|++|..||...+..+.+.
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01123458999999999988888999999999999999999999999888877777
Q ss_pred HHHcCCC
Q 002356 909 NILHKDL 915 (931)
Q Consensus 909 ~I~~~~~ 915 (931)
.+..+.+
T Consensus 213 ~~~~~~~ 219 (257)
T cd08225 213 KICQGYF 219 (257)
T ss_pred HHhcccC
Confidence 7766543
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=2.1e-29 Score=272.13 Aligned_cols=226 Identities=28% Similarity=0.519 Sum_probs=186.6
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||+|+||.||++.+..+++.|++|.+..... .......+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58999999999999999999988999999999876543 24567888999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999999764 348899999999999999999999999999999999999999999999999986543211100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC---CCChhhHHHHHHHHHHHHcCCCCCCCC-CHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGK-TRQK 905 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ell~G~~Pf~~~-~~~~ 905 (931)
........+++.|+|||++.+.. ++.++|+||||+++|++++|+.||... +...
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 00012356889999999998766 788999999999999999999999765 3334
Q ss_pred HHHHHHcC-CCCCCCCC
Q 002356 906 TFANILHK-DLKFPSST 921 (931)
Q Consensus 906 ~~~~I~~~-~~~~p~~~ 921 (931)
....+..+ ...+|...
T Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (264)
T cd06626 215 IMFHVGAGHKPPIPDSL 231 (264)
T ss_pred HHHHHhcCCCCCCCccc
Confidence 44344433 33555543
No 290
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=4e-30 Score=277.86 Aligned_cols=226 Identities=31% Similarity=0.486 Sum_probs=185.4
Q ss_pred cccccccccCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 672 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+.+.||.|.||.||++... ..+..|+||.++.. ......+.+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 34678999999542 2344578899999999999999999999999988889999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||||++|+|.+++.......++......++.||+.||.|||+++|+|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999986445699999999999999999999999999999999999999999999999999855411100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~ 906 (931)
........+...|+|||.+....++.++||||||+++|||++ |+.||...+..++
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223456789999999988889999999999999999999 7899999999999
Q ss_pred HHHHHcCC-CCCCCCCcCC
Q 002356 907 FANILHKD-LKFPSSTPRS 924 (931)
Q Consensus 907 ~~~I~~~~-~~~p~~~~~~ 924 (931)
..++.++. +.+|...+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (259)
T PF07714_consen 215 IEKLKQGQRLPIPDNCPKD 233 (259)
T ss_dssp HHHHHTTEETTSBTTSBHH
T ss_pred cccccccccceeccchhHH
Confidence 99997664 3555554443
No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=4.9e-30 Score=280.54 Aligned_cols=213 Identities=26% Similarity=0.419 Sum_probs=179.5
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|++++.||.|++|.||++.+..+++.||+|.+..... .......+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998865432 22334578889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+ .++|..++.......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred cc-ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 99 4689998876555668999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||.+.+..+.+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 0112235788999999887654 5789999999999999999999998877665555
Q ss_pred HHH
Q 002356 909 NIL 911 (931)
Q Consensus 909 ~I~ 911 (931)
++.
T Consensus 212 ~~~ 214 (284)
T cd07860 212 RIF 214 (284)
T ss_pred HHH
Confidence 443
No 292
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.4e-29 Score=271.19 Aligned_cols=219 Identities=47% Similarity=0.849 Sum_probs=192.9
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||.|+||.||++.+..+++.||+|.+.+...........+..|+.+++.++||||+++++.+......|+||||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999877555555677889999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (931)
.+++.... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 99998753 48999999999999999999999999999999999999999999999999985432110
Q ss_pred hcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC
Q 002356 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (931)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~~~~~~ 916 (931)
.......|+..|++||.+.+...+.++|+||||+++|++++|..||...+..++++.+..+.+.
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456889999999998888889999999999999999999999988888888888888888
Q ss_pred CCCCCcCC
Q 002356 917 FPSSTPRS 924 (931)
Q Consensus 917 ~p~~~~~~ 924 (931)
+|...+..
T Consensus 212 ~~~~~~~~ 219 (250)
T cd05123 212 FPEFLSPE 219 (250)
T ss_pred CCCCCCHH
Confidence 88776433
No 293
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2e-30 Score=305.85 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=161.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCC-eEEEEE--------------EeecccccChHHHHHHHHHHHHHHhcCCCCcc
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~-~~~AvK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (931)
.++|++++.||+|+||.||+|..+... ...+.| .+.+...........+.+|+.+|+.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998764332 222222 11111112223455678999999999999999
Q ss_pred ceeEEEEeCCeEEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q 002356 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 733 ~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~ 809 (931)
++++++...+..|+||+++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 678888775421 122456778899999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHH
Q 002356 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (931)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 889 (931)
+||+|||++....... ........||+.|+|||++.+..++.++|||||||+||
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999986542110 01123467999999999999999999999999999999
Q ss_pred HHHcCCCCC
Q 002356 890 EMLYGYTPF 898 (931)
Q Consensus 890 ell~G~~Pf 898 (931)
+|++|..++
T Consensus 360 ell~~~~~p 368 (501)
T PHA03210 360 DMLSHDFCP 368 (501)
T ss_pred HHHHCCCCC
Confidence 999987543
No 294
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=2.4e-29 Score=280.17 Aligned_cols=214 Identities=27% Similarity=0.434 Sum_probs=183.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|||++++++++......|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 35889999999999999999999999999999987654444455677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. |+|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------ 176 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------ 176 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC------
Confidence 9995 5787777643 2458999999999999999999999999999999999999999999999999874321
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......|++.|+|||++. ...++.++|+|||||++|+|++|++||...+...
T Consensus 177 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 177 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred -------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 112345889999999984 3567889999999999999999999998887777
Q ss_pred HHHHHHcCCC
Q 002356 906 TFANILHKDL 915 (931)
Q Consensus 906 ~~~~I~~~~~ 915 (931)
.+..+..+..
T Consensus 232 ~~~~~~~~~~ 241 (317)
T cd06635 232 ALYHIAQNES 241 (317)
T ss_pred HHHHHHhccC
Confidence 7777766543
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=4.8e-30 Score=285.43 Aligned_cols=197 Identities=28% Similarity=0.447 Sum_probs=159.9
Q ss_pred ccccccCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE--eCCeEEEEEec
Q 002356 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 750 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~--~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lVmE~ 750 (931)
..||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+|+.++||||+++++++. ....+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56899999886542 2235678999999999999999999885 45678999999
Q ss_pred cCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE----ecCCcEEEEeccCCc
Q 002356 751 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (931)
Q Consensus 751 ~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll----~~~g~vkL~DFG~a~ 819 (931)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56888877532 12348899999999999999999999999999999999999 456789999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5431110 01112345789999999999764 5788999999999999999999999
Q ss_pred CCC
Q 002356 899 RGK 901 (931)
Q Consensus 899 ~~~ 901 (931)
.+.
T Consensus 217 ~~~ 219 (317)
T cd07867 217 HCR 219 (317)
T ss_pred ccc
Confidence 754
No 296
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=7.4e-30 Score=280.69 Aligned_cols=215 Identities=22% Similarity=0.349 Sum_probs=181.4
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (931)
.++|++.+.||.|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.++||||+++++++... ...|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 45899999999999999999999989999999998754322 23334567899999999999999999998877 8999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 59999887643 358999999999999999999999999999999999999999999999999986443110
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
.......+++.|+|||.+.+.. ++.++|+|||||++|+|++|.+||.+.+..
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112345788999999987644 578999999999999999999999988887
Q ss_pred HHHHHHHc
Q 002356 905 KTFANILH 912 (931)
Q Consensus 905 ~~~~~I~~ 912 (931)
+.+.++..
T Consensus 214 ~~~~~~~~ 221 (293)
T cd07843 214 DQLNKIFK 221 (293)
T ss_pred HHHHHHHH
Confidence 77766643
No 297
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.2e-29 Score=278.70 Aligned_cols=223 Identities=43% Similarity=0.756 Sum_probs=182.0
Q ss_pred CccccccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
.|++.+.||.|+||.||+|.+. .++..||+|++...... .......+.+|+.+++.+ +|+||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999885 47899999998764322 223446678899999999 699999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||+|+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999765 34899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC--CCCChhhHHHHHHHHHHHHcCCCCCCCC-
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGK- 901 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~- 901 (931)
. ........|+..|+|||.+... .++.++||||||+++|+|++|..||...
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0112245689999999998753 4677999999999999999999999743
Q ss_pred ---CHHHHHHHHHcCCCCCCCC
Q 002356 902 ---TRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 902 ---~~~~~~~~I~~~~~~~p~~ 920 (931)
...++...+......+|..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~ 234 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYPQE 234 (290)
T ss_pred ccccHHHHHHHhhccCCCCCcc
Confidence 3345555555555555544
No 298
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=1.5e-29 Score=276.00 Aligned_cols=212 Identities=29% Similarity=0.451 Sum_probs=182.8
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
-|++++.||.|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++||||+++++++..+...|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 4788999999999999999998899999999876542 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|..++.. ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 9999999999864 348999999999999999999999999999999999999999999999999885432100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred -----------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 011234688899999999888888999999999999999999999998777777766
Q ss_pred HHcC
Q 002356 910 ILHK 913 (931)
Q Consensus 910 I~~~ 913 (931)
+..+
T Consensus 213 ~~~~ 216 (277)
T cd06641 213 IPKN 216 (277)
T ss_pred HhcC
Confidence 6554
No 299
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1e-29 Score=277.82 Aligned_cols=213 Identities=23% Similarity=0.412 Sum_probs=180.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++++.||.|++|.||++.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876532 2234556789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|+. ++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 996 58888876543 245899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
........+++.|++||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 154 -----------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred -----------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 0111234578899999998664 4678999999999999999999999988877776
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..+.+
T Consensus 211 ~~~~~ 215 (284)
T cd07836 211 LKIFR 215 (284)
T ss_pred HHHHH
Confidence 66653
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=2.3e-29 Score=275.97 Aligned_cols=212 Identities=27% Similarity=0.485 Sum_probs=183.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|...+.||.|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++...+..|+++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 466667899999999999999889999999987543 23345567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.|++|.+++.. ..++...+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||.+......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0111235689999999999888899999999999999999999999998888777777
Q ss_pred HHcCC
Q 002356 910 ILHKD 914 (931)
Q Consensus 910 I~~~~ 914 (931)
+..+.
T Consensus 227 ~~~~~ 231 (285)
T cd06648 227 IRDNL 231 (285)
T ss_pred HHhcC
Confidence 77654
No 301
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=7.6e-30 Score=279.37 Aligned_cols=214 Identities=29% Similarity=0.445 Sum_probs=180.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+++++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 479999999999999999999999999999998865422 2334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+.++.|..+.... ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999877666655443 3489999999999999999999999999999999999999999999999999855421110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......++..|+|||++.+. .++.++|+||||+++|+|++|++||.+.+..+.+
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 012235688999999999887 7889999999999999999999999987766555
Q ss_pred HHHH
Q 002356 908 ANIL 911 (931)
Q Consensus 908 ~~I~ 911 (931)
..+.
T Consensus 212 ~~~~ 215 (288)
T cd07833 212 YLIQ 215 (288)
T ss_pred HHHH
Confidence 5443
No 302
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.1e-29 Score=279.32 Aligned_cols=212 Identities=28% Similarity=0.425 Sum_probs=181.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56999999999999999999998899999999987654444556677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. |+|.+++.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~------ 166 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS------ 166 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC------
Confidence 9995 67777775432 358999999999999999999999999999999999999999999999999884321
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......|++.|+|||++. ...++.++||||||+++|+|++|++||.+.+...
T Consensus 167 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 167 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred -------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 012345888999999874 3557889999999999999999999998877766
Q ss_pred HHHHHHcC
Q 002356 906 TFANILHK 913 (931)
Q Consensus 906 ~~~~I~~~ 913 (931)
....+..+
T Consensus 222 ~~~~~~~~ 229 (307)
T cd06607 222 ALYHIAQN 229 (307)
T ss_pred HHHHHhcC
Confidence 65555443
No 303
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=1.2e-29 Score=278.62 Aligned_cols=204 Identities=28% Similarity=0.403 Sum_probs=171.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+.+.||+|+||.||++.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++......|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999865422 12233567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+ +++|.+++..+. ..++...++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 82 FEYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred Eecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 9999 577877775543 347888899999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 158 -------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred -------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 01123357899999999875 357889999999999999999999998654
No 304
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=1.6e-29 Score=279.73 Aligned_cols=219 Identities=21% Similarity=0.332 Sum_probs=178.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+...+|+..+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 445689999999999999999999877765 57888876532 233345678899999999999999999988654
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..++++||+++|+|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 4679999999999999987643 35889999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
..... ........++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEK-------------------------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCccc-------------------------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 21100 001112345778999999998889999999999999999997 9999988
Q ss_pred CCHHHHHHHHHcC
Q 002356 901 KTRQKTFANILHK 913 (931)
Q Consensus 901 ~~~~~~~~~I~~~ 913 (931)
....+....+..+
T Consensus 215 ~~~~~~~~~~~~~ 227 (303)
T cd05110 215 IPTREIPDLLEKG 227 (303)
T ss_pred CCHHHHHHHHHCC
Confidence 7766665555443
No 305
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=1.4e-29 Score=277.24 Aligned_cols=214 Identities=29% Similarity=0.410 Sum_probs=176.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEE-----e
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~ 740 (931)
..++|++++.||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4578999999999999999999999999999999876431 1234577899999999 7999999999873 4
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
++.+|+||||++|++|.+++... ....+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 56799999999999999987632 2345889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-----CCCCChhhHHHHHHHHHHHHc
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~ 893 (931)
...... ........|++.|+|||++.. ..++.++|+|||||++|+|++
T Consensus 172 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 172 AQLTST---------------------------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred eecccC---------------------------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 543210 001123468999999999853 447789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHH
Q 002356 894 GYTPFRGKTRQKTFANIL 911 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~ 911 (931)
|+.||...+....+.++.
T Consensus 225 g~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 225 GDPPLADLHPMRALFKIP 242 (286)
T ss_pred CCCCCCCCchhHHHhhcc
Confidence 999998776555444443
No 306
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.1e-29 Score=274.56 Aligned_cols=213 Identities=28% Similarity=0.478 Sum_probs=183.0
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|+||.||++.+..+++.+|+|.+..... ......+.+|+++++.++||||+++++++...+.++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 468899999999999999999999999999999876532 345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||+.+++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999998653 458999999999999999999999 99999999999999999999999999988433100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-----C
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~-----~ 902 (931)
......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156888999999999888999999999999999999999999754 3
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..+.++.+..+
T Consensus 209 ~~~~~~~~~~~ 219 (265)
T cd06605 209 IFELLQYIVNE 219 (265)
T ss_pred HHHHHHHHhcC
Confidence 34555555544
No 307
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.2e-29 Score=281.33 Aligned_cols=216 Identities=29% Similarity=0.415 Sum_probs=180.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (931)
..++|++.+.||.|+||.||++.+..++..||+|.+...... ........+|+.+++.++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 467899999999999999999999999999999998754321 12223456799999999999999999998754 578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999994 58988887542 45899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
. .......+++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999865 4578899999999999999999999999998
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
.+.+..+.+
T Consensus 215 ~~~~~~~~~ 223 (309)
T cd07845 215 IEQLDLIIQ 223 (309)
T ss_pred HHHHHHHHH
Confidence 888887765
No 308
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=1.8e-29 Score=275.11 Aligned_cols=210 Identities=28% Similarity=0.503 Sum_probs=179.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC---CCCccceeEEEEeCCeEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~l 746 (931)
.|++.+.||.|+||.||++.+..+++.||+|.+.... .......+.+|+.+++.+. |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888999999999999999999999999999986542 2344567888999999996 9999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
||||++|++|.+++... .+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 48999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
.......|++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 11123468999999999865 446889999999999999999999998877655
Q ss_pred HHHHHH
Q 002356 906 TFANIL 911 (931)
Q Consensus 906 ~~~~I~ 911 (931)
.+..+.
T Consensus 210 ~~~~~~ 215 (277)
T cd06917 210 AMMLIP 215 (277)
T ss_pred hhhccc
Confidence 554443
No 309
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.6e-29 Score=278.14 Aligned_cols=215 Identities=21% Similarity=0.375 Sum_probs=176.5
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe----
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH---- 743 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~---- 743 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 469999999999999999999999999999998865422 222345677899999999 56999999999887655
Q ss_pred -EEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCC
Q 002356 744 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 818 (931)
Q Consensus 744 -~~lVmE~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a 818 (931)
.|+||||+.+ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999965 8988886532 245899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
...... ........+++.|+|||++.+ ..++.++|+|||||++|+|++|.+|
T Consensus 159 ~~~~~~---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIP---------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCC---------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 543211 011122357889999998865 4568899999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|.+.+..+.+.++.+
T Consensus 212 ~~~~~~~~~~~~~~~ 226 (295)
T cd07837 212 FPGDSELQQLLHIFK 226 (295)
T ss_pred CCCCCHHHHHHHHHH
Confidence 998877766655543
No 310
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=2.5e-29 Score=273.10 Aligned_cols=215 Identities=27% Similarity=0.435 Sum_probs=179.0
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-------ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------NRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-------~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
+|.+.+.||.|+||.||++.+..+++.+|+|.+...... .....+.+..|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 588899999999999999999889999999988643211 1123456788999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..++||||+.+++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999765 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC--CCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... ........|+..|+|||++.... ++.++|+||||+++|++++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1000 01122346889999999987654 78899999999999999999999987
Q ss_pred CCHHHHHHHHH
Q 002356 901 KTRQKTFANIL 911 (931)
Q Consensus 901 ~~~~~~~~~I~ 911 (931)
....+.+..+.
T Consensus 215 ~~~~~~~~~~~ 225 (272)
T cd06629 215 EEAIAAMFKLG 225 (272)
T ss_pred cchHHHHHHhh
Confidence 66555444443
No 311
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=2.7e-29 Score=269.43 Aligned_cols=222 Identities=32% Similarity=0.565 Sum_probs=191.8
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|.+.+.||.|+||.||++.+..++..||+|.+..... .......+..|+++++.++|||++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999998999999999876432 34556678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 750 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|+++++|.+++.... ...++...+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999997643 3569999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......|++.|+|||.+....++.++|+||||+++|+|++|+.||...+..++.
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 1123346889999999998888999999999999999999999999988888888
Q ss_pred HHHHcCCC-CCCC
Q 002356 908 ANILHKDL-KFPS 919 (931)
Q Consensus 908 ~~I~~~~~-~~p~ 919 (931)
..+..+.+ .+|.
T Consensus 213 ~~~~~~~~~~~~~ 225 (258)
T cd08215 213 LKILKGQYPPIPS 225 (258)
T ss_pred HHHhcCCCCCCCC
Confidence 88776643 3443
No 312
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=2.4e-29 Score=275.13 Aligned_cols=203 Identities=26% Similarity=0.369 Sum_probs=168.0
Q ss_pred CCc-cccccccccCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--C
Q 002356 669 QHF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (931)
Q Consensus 669 ~~y-~i~~~LG~G~~g~Vy~~~~----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (931)
++| ++.+.||+|+||+||++.. ..++..+|+|.+.... .......+.+|+.+|+.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 9999999999999988653 3467899999987542 22345677889999999999999999998765 3
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|++|||+.+++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 5689999999999999999763 3899999999999999999999999999999999999999999999999998644
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
..... .........++..|+|||.+....++.++|||||||++|+|++|..||..
T Consensus 158 ~~~~~------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 158 PEGHE------------------------YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred CCcch------------------------hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 21100 00111223456779999999888899999999999999999999999864
No 313
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=3.2e-29 Score=270.44 Aligned_cols=214 Identities=29% Similarity=0.496 Sum_probs=185.9
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++|++.+.||.|++|.||++.+..+++.|++|.+..... ......+.+|+.++..++||||+++++++......++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368999999999999999999999999999999876532 245677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||+++++|.+++... ..+++..+..++.|++.||.|||+ +|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 999999999999865 458999999999999999999999 999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---CHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQ 904 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~---~~~ 904 (931)
.......++..|+|||.+....++.++|+||||+++|+|++|..||... ...
T Consensus 155 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 155 -------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred -------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 0112346889999999999888899999999999999999999999876 556
Q ss_pred HHHHHHHcC
Q 002356 905 KTFANILHK 913 (931)
Q Consensus 905 ~~~~~I~~~ 913 (931)
+..+.+...
T Consensus 210 ~~~~~~~~~ 218 (264)
T cd06623 210 ELMQAICDG 218 (264)
T ss_pred HHHHHHhcC
Confidence 666666654
No 314
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=2.2e-29 Score=274.95 Aligned_cols=221 Identities=20% Similarity=0.239 Sum_probs=184.3
Q ss_pred ccCCCccccccccccCcEEEEEEEEec----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~----~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 740 (931)
+..++|++.+.||+|+||.||++.+.. ++..+++|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999876 3588999987643 244556778899999999999999999998665
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEe
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~------~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~D 814 (931)
....+++++|+.+++|.+++..... ..++...+..++.||+.||+|||++|++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5778999999999999999876422 4589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-
Q 002356 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (931)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~- 893 (931)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998644211100 00112345678999999998889999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcC
Q 002356 894 GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 894 G~~Pf~~~~~~~~~~~I~~~ 913 (931)
|++||...+..++...+..+
T Consensus 216 g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred CCCCcCcCCHHHHHHHHHcC
Confidence 99999988887877766654
No 315
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.7e-29 Score=279.73 Aligned_cols=219 Identities=24% Similarity=0.323 Sum_probs=177.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 5689999999999999999999999999999998865422 112223456799999999999999999988654
Q ss_pred --CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 742 --~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
...|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3469999999 568888886543 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CCChhhHHHHHHHHHHHHcCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
........ .........++..|+|||.+.+.. ++.++||||||+++|+|++|.+||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54321110 001122346789999999986643 678999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002356 899 RGKTRQKTFANILH 912 (931)
Q Consensus 899 ~~~~~~~~~~~I~~ 912 (931)
.+.+.......+..
T Consensus 225 ~~~~~~~~~~~~~~ 238 (310)
T cd07865 225 QGNTEQHQLTLISQ 238 (310)
T ss_pred CCCCHHHHHHHHHH
Confidence 98877665554443
No 316
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=2.2e-29 Score=273.38 Aligned_cols=210 Identities=21% Similarity=0.308 Sum_probs=168.2
Q ss_pred ccccccCcEEEEEEEEe--cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
+.||+|+||.||++... .++..+|+|.+.... .......+.+|+.+++.++||||+++++++.....+++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999864 355789999876542 22334568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 753 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 753 ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
+++|.+++.... ...++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~---- 154 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED---- 154 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc----
Confidence 999999997532 1245677888999999999999999999999999999999999999999999985321100
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-------CCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-------~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
.........|++.|+|||++.+. .++.++|+|||||++|+|++ |..||...
T Consensus 155 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 155 ---------------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ---------------------eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 00112234578899999998642 35679999999999999996 99999877
Q ss_pred CHHHHHHHHH
Q 002356 902 TRQKTFANIL 911 (931)
Q Consensus 902 ~~~~~~~~I~ 911 (931)
...+......
T Consensus 214 ~~~~~~~~~~ 223 (269)
T cd05087 214 SDEQVLTYTV 223 (269)
T ss_pred ChHHHHHHHh
Confidence 7666554433
No 317
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=2.1e-29 Score=275.23 Aligned_cols=214 Identities=28% Similarity=0.438 Sum_probs=172.6
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhcCCCCccceeEEEEeCCeEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
++|++.+.||+|+||.||++.+..+++.||+|.+.+... ......+..|+.+ ++.++||||+++++++...+.+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876532 1223445556665 6677999999999999999999999
Q ss_pred EeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|||+ .++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999 57888887642 234689999999999999999999998 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122458889999998865 4567899999999999999999999975
Q ss_pred C-CHHHHHHHHHcC
Q 002356 901 K-TRQKTFANILHK 913 (931)
Q Consensus 901 ~-~~~~~~~~I~~~ 913 (931)
. ...+.+..+..+
T Consensus 210 ~~~~~~~~~~~~~~ 223 (283)
T cd06617 210 WKTPFQQLKQVVEE 223 (283)
T ss_pred cccCHHHHHHHHhc
Confidence 2 333444444443
No 318
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-32 Score=270.63 Aligned_cols=220 Identities=25% Similarity=0.391 Sum_probs=178.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhcCCCCccceeEEEEeCCe
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~ 743 (931)
.+..++.+-+..||.|+||+|++..++.+|+..|||.+..... .....++..|.+. ++.-++||||++|+..-.++.
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 3455667778899999999999999999999999999987543 3445667777775 455589999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 744 VCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
.||.||+| ..||..+.+. -....++++.+-.|....+.||.||-.. .||||||||+|||++..|.+||||||++.
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 99999999 7777665442 2335699999999999999999999875 89999999999999999999999999984
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc--CCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
....+ -....-.|...|||||.+. ..+|+-++|+||||++|||+.||+.|
T Consensus 217 qLv~S----------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP 268 (361)
T KOG1006|consen 217 QLVDS----------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP 268 (361)
T ss_pred hHHHH----------------------------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence 33211 1112336889999999995 34688899999999999999999999
Q ss_pred CCCC-CHHHHHHHHHcCCC
Q 002356 898 FRGK-TRQKTFANILHKDL 915 (931)
Q Consensus 898 f~~~-~~~~~~~~I~~~~~ 915 (931)
|.+- +..+.+.++..|.+
T Consensus 269 yr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 269 YRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred cchHHHHHHHHHHHHcCCC
Confidence 9875 44566777777765
No 319
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.7e-29 Score=275.88 Aligned_cols=215 Identities=30% Similarity=0.416 Sum_probs=178.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC-----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 741 (931)
.++|.+.+.||.|+||.||++.+..+++.+|+|++.... .....+..|+.+++.+ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 578999999999999999999999999999999986531 2235567899999998 899999999998643
Q ss_pred CeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
+.+|+||||++|++|.+++... ....+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 4689999999999999988632 23458999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-----CCCChhhHHHHHHHHHHHHcC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ell~G 894 (931)
...... .......|++.|+|||++... .++.++|||||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432100 011234688999999998543 257899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcC
Q 002356 895 YTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 895 ~~Pf~~~~~~~~~~~I~~~ 913 (931)
++||...+..+.+..+.++
T Consensus 230 ~~p~~~~~~~~~~~~~~~~ 248 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRN 248 (291)
T ss_pred CCCCCCCcHHHHHHHHhcC
Confidence 9999987776666666554
No 320
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=1.2e-29 Score=279.30 Aligned_cols=210 Identities=26% Similarity=0.453 Sum_probs=180.3
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.++|.+.+.||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999888999999998643 223446788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++... .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999999998753 37899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......|++.|++||.+....++.++|+|||||++|++++|..||...+..+.+
T Consensus 170 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 170 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred -------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence 1112346889999999998888899999999999999999999999876654444
Q ss_pred HHH
Q 002356 908 ANI 910 (931)
Q Consensus 908 ~~I 910 (931)
..+
T Consensus 225 ~~~ 227 (293)
T cd06647 225 YLI 227 (293)
T ss_pred eeh
Confidence 333
No 321
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=2.9e-29 Score=269.09 Aligned_cols=218 Identities=26% Similarity=0.368 Sum_probs=179.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCC
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~gg 754 (931)
+.||.|+||.||++.+.. ++.||+|.+..... ......+.+|+.+++.++||||+++++++......++||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999998876432 235567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 002356 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (931)
Q Consensus 755 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (931)
+|.+++.... ..++...+..++.+++.+|.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-------- 148 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-------- 148 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc--------
Confidence 9999987643 3588999999999999999999999999999999999999999999999999854321000
Q ss_pred hhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHcC
Q 002356 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~I~~~ 913 (931)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+..+
T Consensus 149 -----------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~ 211 (251)
T cd05041 149 -----------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211 (251)
T ss_pred -----------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence 000011234567999999988889999999999999999998 89999888877777776654
Q ss_pred -CCCCCCCC
Q 002356 914 -DLKFPSST 921 (931)
Q Consensus 914 -~~~~p~~~ 921 (931)
.+..|...
T Consensus 212 ~~~~~~~~~ 220 (251)
T cd05041 212 YRMPAPQLC 220 (251)
T ss_pred CCCCCCccC
Confidence 23444443
No 322
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=4.7e-29 Score=273.63 Aligned_cols=213 Identities=30% Similarity=0.493 Sum_probs=179.4
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--CCeEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 746 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~l 746 (931)
++|...+.||.|++|.||++.+..+++.||+|.+.... .......+.+|+++++.++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46889999999999999999999999999999987542 22455778899999999999999999998864 457899
Q ss_pred EEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 747 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
||||++|++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988764 22345899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~--- 901 (931)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011235788999999999888999999999999999999999999865
Q ss_pred --CHHHHHHHHHc
Q 002356 902 --TRQKTFANILH 912 (931)
Q Consensus 902 --~~~~~~~~I~~ 912 (931)
...+....+..
T Consensus 210 ~~~~~~~~~~~~~ 222 (287)
T cd06621 210 PLGPIELLSYIVN 222 (287)
T ss_pred CCChHHHHHHHhc
Confidence 33455555554
No 323
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=1.2e-29 Score=281.81 Aligned_cols=209 Identities=27% Similarity=0.428 Sum_probs=173.3
Q ss_pred CccccccccccCcEEEEEEEEec--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~--~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (931)
+|++.+.||+|+||.||++.+.. +++.||+|.+.............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999988 8999999999874322334456678899999999999999999999987 8899
Q ss_pred EEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec----CCcEEEEeccCC
Q 002356 746 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 818 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~----~g~vkL~DFG~a 818 (931)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5777776532 1235899999999999999999999999999999999999998 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
........ .........+++.|+|||++.+. .++.++|+|||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLK------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCcc------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 65421110 01112345688999999988764 578899999999999999999999
Q ss_pred CCCCCH
Q 002356 898 FRGKTR 903 (931)
Q Consensus 898 f~~~~~ 903 (931)
|.+...
T Consensus 216 ~~~~~~ 221 (316)
T cd07842 216 FKGREA 221 (316)
T ss_pred CcCCcc
Confidence 986543
No 324
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=7.8e-30 Score=275.20 Aligned_cols=210 Identities=20% Similarity=0.312 Sum_probs=169.4
Q ss_pred ccccccCcEEEEEEEEecCCe-------EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 675 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~-------~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
+.||+|+||.||++.+..++. .+|+|.+... .......+..|..+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865443 4888877543 234456778899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc--------EEEEeccCCc
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 819 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~--------vkL~DFG~a~ 819 (931)
|||+.+|+|.+++..+. ..+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997653 35899999999999999999999999999999999999987765 6899999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcC-CCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG-YTP 897 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G-~~P 897 (931)
... ......+++.|+|||++.+. .++.++|||||||++|+|++| .+|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 11234578899999999764 478899999999999999998 577
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCC
Q 002356 898 FRGKTRQKTFANILHKDLKFPSS 920 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~~~~p~~ 920 (931)
|...+..... .+......+|..
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~~ 227 (258)
T cd05078 206 LSALDSQKKL-QFYEDRHQLPAP 227 (258)
T ss_pred hhhccHHHHH-HHHHccccCCCC
Confidence 7766554443 334445555554
No 325
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=7e-29 Score=275.92 Aligned_cols=211 Identities=28% Similarity=0.421 Sum_probs=180.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|...+.||+|+||.||++.+..++..|++|.+.............+.+|+.+++.++|||++++++++......|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37778889999999999999999999999999876544445556678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+ .++|.+++.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 102 ~~-~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 568888776543 458999999999999999999999999999999999999999999999999873211
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
......|+..|+|||++. ...++.++|+|||||++|+|++|.+||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 35578899999999999999999999988777666
Q ss_pred HHHHHcC
Q 002356 907 FANILHK 913 (931)
Q Consensus 907 ~~~I~~~ 913 (931)
..++..+
T Consensus 229 ~~~~~~~ 235 (313)
T cd06633 229 LYHIAQN 235 (313)
T ss_pred HHHHHhc
Confidence 6666544
No 326
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=1.3e-29 Score=274.83 Aligned_cols=221 Identities=23% Similarity=0.335 Sum_probs=180.0
Q ss_pred ccccccCcEEEEEEEEecCC------eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 675 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
+.||.|+||.||++.+.... ..+|+|.+.+.. .......+.+|+.+++.++||||+++++++......++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986544 789999886542 2234567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-----cEEEEeccCC
Q 002356 749 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 818 (931)
Q Consensus 749 E~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-----~vkL~DFG~a 818 (931)
||+++++|.+++... ....++...+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999753 223478899999999999999999999999999999999999877 8999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~P 897 (931)
....... .........++..|+|||++.+..++.++|||||||++|+|++ |+.|
T Consensus 159 ~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSD-------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ccccccc-------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 5432100 0011123346788999999998889999999999999999997 9999
Q ss_pred CCCCCHHHHHHHHHcC-CCCCCCCCc
Q 002356 898 FRGKTRQKTFANILHK-DLKFPSSTP 922 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~-~~~~p~~~~ 922 (931)
|...+..+....+..+ .+..|...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05044 214 YPALNNQEVLQHVTAGGRLQKPENCP 239 (269)
T ss_pred CcccCHHHHHHHHhcCCccCCcccch
Confidence 9988888887777654 345554443
No 327
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=2e-29 Score=273.67 Aligned_cols=194 Identities=31% Similarity=0.506 Sum_probs=165.0
Q ss_pred CCccccccc--cccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 669 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 669 ~~y~i~~~L--G~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
+.|.+.+.+ |+|+||.||++.++.++..||+|.+.+..... .|+.+...+ +||||++++++|...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 467777766 99999999999999999999999987542211 123333323 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~ 824 (931)
+||||+++++|.+++..+. .+++..++.++.||+.||.|||++|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 9999999999999998753 599999999999999999999999999999999999999988 999999998854321
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.....|++.|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 211 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED 211 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc
Confidence 1123588999999999988899999999999999999999999986543
No 328
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=1.4e-29 Score=284.34 Aligned_cols=213 Identities=25% Similarity=0.424 Sum_probs=175.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (931)
.++|++.+.||+|+||.||++.+..+++.||+|.+... ........+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999999999999999998642 1233456677899999999999999999887643 4
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 589999999 5688888754 348999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0011123568999999998754 46788999999999999999999999877
Q ss_pred CHHHHHHHH
Q 002356 902 TRQKTFANI 910 (931)
Q Consensus 902 ~~~~~~~~I 910 (931)
+....+..+
T Consensus 214 ~~~~~~~~~ 222 (336)
T cd07849 214 DYLHQLNLI 222 (336)
T ss_pred CHHHHHHHH
Confidence 655444433
No 329
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.8e-29 Score=281.06 Aligned_cols=221 Identities=20% Similarity=0.281 Sum_probs=177.9
Q ss_pred cccccc--CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 675 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 675 ~~LG~G--~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
..||.| +||+||++.+..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 999999999999999999999876432 33455788899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 002356 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (931)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (931)
+++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999998754456899999999999999999999999999999999999999999999999865322110000
Q ss_pred hhhhhcccCCCCccccccccccccccccCCcccchhhhcCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q 002356 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (931)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I 910 (931)
............++..|+|||++.+. .++.++|||||||++|+|++|++||.+....+.+..+
T Consensus 158 ---------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 ---------------AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred ---------------ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 00000111123456779999999763 4678999999999999999999999988777766666
Q ss_pred HcCCCC
Q 002356 911 LHKDLK 916 (931)
Q Consensus 911 ~~~~~~ 916 (931)
+.+...
T Consensus 223 ~~~~~~ 228 (328)
T cd08226 223 LKGPPY 228 (328)
T ss_pred hcCCCC
Confidence 665443
No 330
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=4.3e-29 Score=273.62 Aligned_cols=215 Identities=28% Similarity=0.459 Sum_probs=186.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+.|++...||.|++|.||++.+..++..+++|++..... ....+.+|+++++.++|+||+++++++......|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999876422 456788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++.... ..++...+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 359999999999999999999999999999999999999999999999999874332100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......+++.|++||.+.+..++.++|+|||||++|+|++|+.||...+.....
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112345788999999998888899999999999999999999999988776666
Q ss_pred HHHHcCC
Q 002356 908 ANILHKD 914 (931)
Q Consensus 908 ~~I~~~~ 914 (931)
..+..+.
T Consensus 226 ~~~~~~~ 232 (286)
T cd06614 226 FLITTKG 232 (286)
T ss_pred HHHHhcC
Confidence 6665443
No 331
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=3.2e-29 Score=269.15 Aligned_cols=216 Identities=30% Similarity=0.497 Sum_probs=187.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||.|+||.||++.+..++..||+|.+..... .......+..|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 58899999999999999999999999999999876543 23445677889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 750 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 750 ~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|+++++|.+++... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998662 2245899999999999999999999999999999999999999999999999998554211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
......|++.|++||.+.+..++.++|+||||+++|+|++|+.||...+..++.
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999999888999999999999999999999999998887777
Q ss_pred HHHHcCCC
Q 002356 908 ANILHKDL 915 (931)
Q Consensus 908 ~~I~~~~~ 915 (931)
..+..+.+
T Consensus 211 ~~~~~~~~ 218 (256)
T cd08530 211 YKVQRGKY 218 (256)
T ss_pred HHHhcCCC
Confidence 77766554
No 332
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=4.8e-29 Score=272.85 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=169.0
Q ss_pred CCCccccccccccCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (931)
..+|++++.||+|+||.||++.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35799999999999999999974 457889999998654 33455678899999999999999999998653 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+++||||+++++|.+++.... ..++...+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999997643 34899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
...... ........++..|+|||++.+..++.++|||||||++|+|++|..|+..
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 213 (284)
T cd05081 159 PQDKEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213 (284)
T ss_pred cCCCcc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence 211100 0001112245569999999888899999999999999999998877653
No 333
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.6e-29 Score=283.32 Aligned_cols=211 Identities=29% Similarity=0.455 Sum_probs=177.7
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
..++|++.+.||+|+||.||++.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 35789999999999999999999999999999999876422 223345677899999999999999999988643
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...|++++++ |++|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~ 169 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 169 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccc
Confidence 4578899988 88999888653 489999999999999999999999999999999999999999999999999853
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.
T Consensus 170 ~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 170 TDD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred ccc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 210 1123468899999999866 467889999999999999999999998
Q ss_pred CCCHHHHHHHHHc
Q 002356 900 GKTRQKTFANILH 912 (931)
Q Consensus 900 ~~~~~~~~~~I~~ 912 (931)
+.+....+..++.
T Consensus 220 ~~~~~~~~~~~~~ 232 (345)
T cd07877 220 GTDHIDQLKLILR 232 (345)
T ss_pred CCCHHHHHHHHHH
Confidence 8777766666554
No 334
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2.4e-29 Score=274.94 Aligned_cols=213 Identities=24% Similarity=0.416 Sum_probs=179.2
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|++.+.||.|++|.||++.+..++..||+|.+..... .......+.+|+.+++.++|||++++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 7788999999999999999999999999999876432 222335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 9 579999998765456899999999999999999999999999999999999999999999999998543211
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
........+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+....+.+
T Consensus 153 ---------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 153 ---------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ---------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111223568899999988664 468899999999999999999999998777655555
Q ss_pred HHc
Q 002356 910 ILH 912 (931)
Q Consensus 910 I~~ 912 (931)
+.+
T Consensus 212 ~~~ 214 (283)
T cd07835 212 IFR 214 (283)
T ss_pred HHH
Confidence 443
No 335
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=3.1e-29 Score=282.51 Aligned_cols=211 Identities=29% Similarity=0.466 Sum_probs=178.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (931)
.++|++++.||.|+||.||++.+..++..||+|.+.+.. ........+.+|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 578999999999999999999999999999999986532 22334456788999999999999999999987543
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 743 -~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
.+++||||+ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899988864 34899999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123457889999999876 4578899999999999999999999998
Q ss_pred CCHHHHHHHHHcC
Q 002356 901 KTRQKTFANILHK 913 (931)
Q Consensus 901 ~~~~~~~~~I~~~ 913 (931)
.+....+..+.+.
T Consensus 219 ~~~~~~~~~~~~~ 231 (343)
T cd07880 219 HDHLDQLMEIMKV 231 (343)
T ss_pred CCHHHHHHHHHHh
Confidence 8777776666553
No 336
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-30 Score=282.67 Aligned_cols=240 Identities=23% Similarity=0.313 Sum_probs=210.0
Q ss_pred ccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 662 ~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
..|.+...+.+..++||-|.||.||.+.+++..-.+|||.++.+.+ .++.|..|..+|+.++|||+|+|+++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 3456777788888999999999999999999999999999876543 678899999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|||+|||..|+|.++|.......++.-.+..++.||..|++||..+++|||||...|+|+..+..||++|||+++++
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999998765566788888899999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
..+. +.......-.+.|.|||-+....++.++|||+|||+|||+.| |..||.+
T Consensus 416 tgDT--------------------------YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 416 TGDT--------------------------YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCCc--------------------------eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 4221 111111223458999999999999999999999999999996 9999999
Q ss_pred CCHHHHHHHHHcC-CCCCCCCCcCChhhhhcC
Q 002356 901 KTRQKTFANILHK-DLKFPSSTPRSKEQIRFA 931 (931)
Q Consensus 901 ~~~~~~~~~I~~~-~~~~p~~~~~~~~~~~~~ 931 (931)
-+..++|..+.+| .++-|..||.....+|.|
T Consensus 470 idlSqVY~LLEkgyRM~~PeGCPpkVYeLMra 501 (1157)
T KOG4278|consen 470 IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRA 501 (1157)
T ss_pred ccHHHHHHHHhccccccCCCCCCHHHHHHHHH
Confidence 9999999888887 579999999888777643
No 337
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=7.1e-29 Score=267.92 Aligned_cols=214 Identities=20% Similarity=0.289 Sum_probs=172.7
Q ss_pred ccccccCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE-eCCeEEEEEec
Q 002356 675 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 750 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lVmE~ 750 (931)
+.||+|+||.||++.+.. ....+|+|.+... ........+.+|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998754 3468999987542 23345677888999999999999999999765 45678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+.+++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99999999997643 34677788889999999999999999999999999999999999999999998643211000
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~ 909 (931)
.........+++.|+|||.+....++.++|||||||++|+|++ |.+||...+..++...
T Consensus 155 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 155 --------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred --------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 0011122346778999999988889999999999999999999 6788888887777777
Q ss_pred HHcCC
Q 002356 910 ILHKD 914 (931)
Q Consensus 910 I~~~~ 914 (931)
+.++.
T Consensus 215 ~~~~~ 219 (262)
T cd05058 215 LLQGR 219 (262)
T ss_pred HhcCC
Confidence 77653
No 338
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=4.4e-29 Score=273.30 Aligned_cols=203 Identities=24% Similarity=0.367 Sum_probs=170.0
Q ss_pred CCccccccccccCcEEEEEEEE----ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--C
Q 002356 669 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 742 (931)
..|++++.||+|+||.||++.. ..++..||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4589999999999999999985 4568899999986542 234456788999999999999999999988764 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..++||||++|++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999997643 348999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.... .........|+..|+|||++.+..++.++|||||||++|+|++++.|+
T Consensus 161 ~~~~------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 161 TDKE------------------------YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred cCcc------------------------ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence 1110 001112345777899999998888999999999999999999987765
No 339
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=1e-28 Score=264.81 Aligned_cols=222 Identities=27% Similarity=0.451 Sum_probs=188.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|+++++.++|||++++++++......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58899999999999999999998999999999977643 23456788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+.+++|.+++... ..+++..+..++.|++.+|.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999999765 4589999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+......+
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 01234688899999999888888999999999999999999999987766555555
Q ss_pred HHc-CCCCCCCCC
Q 002356 910 ILH-KDLKFPSST 921 (931)
Q Consensus 910 I~~-~~~~~p~~~ 921 (931)
+.. ....+|...
T Consensus 211 ~~~~~~~~~~~~~ 223 (254)
T cd06627 211 IVQDDHPPLPEGI 223 (254)
T ss_pred HhccCCCCCCCCC
Confidence 543 334455444
No 340
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=1.5e-29 Score=283.86 Aligned_cols=216 Identities=26% Similarity=0.433 Sum_probs=178.7
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE----eCCeE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHV 744 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~ 744 (931)
++|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+|+.++||||+++++++. .....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 689999999999999999999999999999999876422 2334566778999999999999999999875 34578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 56899988754 34999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0111224578999999999865 4578899999999999999999999988776
Q ss_pred HHHHHHHH
Q 002356 904 QKTFANIL 911 (931)
Q Consensus 904 ~~~~~~I~ 911 (931)
...+..+.
T Consensus 218 ~~~~~~~~ 225 (334)
T cd07855 218 VHQLKLIL 225 (334)
T ss_pred HHHHHHHH
Confidence 65554443
No 341
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=5.4e-29 Score=270.55 Aligned_cols=223 Identities=25% Similarity=0.367 Sum_probs=180.0
Q ss_pred ccccccccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----
Q 002356 671 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (931)
|.+.+.||+|+||.||++.+. .+++.+|||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 678889999999999999864 357899999987543 23445677889999999999999999999885432
Q ss_pred -eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 743 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 743 -~~~lVmE~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
..+++++|+.+++|.+++... ....++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999999887532 112478899999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~ 896 (931)
+........ ........+++.|++||.+....++.++|||||||++|+|++ |++
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 864321100 011123345678999999998889999999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHcCC-CCCCC
Q 002356 897 PFRGKTRQKTFANILHKD-LKFPS 919 (931)
Q Consensus 897 Pf~~~~~~~~~~~I~~~~-~~~p~ 919 (931)
||.+.+..+.+..+.++. +..|.
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~ 238 (273)
T cd05074 215 PYAGVENSEIYNYLIKGNRLKQPP 238 (273)
T ss_pred CCCCCCHHHHHHHHHcCCcCCCCC
Confidence 999888888888777653 34443
No 342
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=8.3e-29 Score=268.60 Aligned_cols=219 Identities=26% Similarity=0.399 Sum_probs=183.8
Q ss_pred CccccccccccCcEEEEEEEEec-CCeEEEEEEeecccc-------cChHHHHHHHHHHHHHHh-cCCCCccceeEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~AvK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 740 (931)
.|++.+.||.|+||.||++.+.. +++.+|+|.+..... ........+.+|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 688999998864321 123345667788888865 699999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
.+..|++|||++|++|.+++.. .....+++..++.++.|++.+|.|||+ .||+|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999998853 223458999999999999999999996 7899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+...... .......|+..|++||.+.+..++.++|+||||+++|+|++|++|
T Consensus 161 ~~~~~~~----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPE----------------------------SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeecccc----------------------------cccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 8543210 012244688999999999988899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCC
Q 002356 898 FRGKTRQKTFANILHKDLK 916 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~~~ 916 (931)
|...+.......+..+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred ccccCHHHHHHHHhhccCC
Confidence 9988877777777766543
No 343
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=1.4e-30 Score=267.17 Aligned_cols=208 Identities=29% Similarity=0.466 Sum_probs=175.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-CC
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 742 (931)
...|+++..||+|+||.||++....++ +.||+|.++.... ........++|+.+++.++||||+.+..+|-. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 457999999999999999999665542 3799998865422 22334567899999999999999999999876 88
Q ss_pred eEEEEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC----CcEEEEec
Q 002356 743 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 815 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~----g~vkL~DF 815 (931)
.+++++||. .-+|+.+++.. ..+.++...++.|+.||+.|+.|||++=|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 55888888742 23569999999999999999999999999999999999999988 89999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G 894 (931)
|+++.+..+ ..|.......+-|.+|.|||.+.+. .|+++.|+|+.|||+.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999886421 1233455677899999999999886 468899999999999999999
Q ss_pred CCCCCCC
Q 002356 895 YTPFRGK 901 (931)
Q Consensus 895 ~~Pf~~~ 901 (931)
.+.|.+.
T Consensus 237 ~PlF~g~ 243 (438)
T KOG0666|consen 237 EPLFKGR 243 (438)
T ss_pred Cccccch
Confidence 9999874
No 344
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=7.3e-29 Score=270.71 Aligned_cols=208 Identities=25% Similarity=0.423 Sum_probs=172.6
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC--CeEEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THVCLI 747 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~~lV 747 (931)
|++++.||+|+||.||++.+..+++.||+|.+++... .... .....|+.++..+ +||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876422 2222 2345788888888 599999999999887 899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+. ++|.+.+..+. ..+++..++.++.||+.||.|||++||+||||||+||+++. +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--- 152 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--- 152 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC---
Confidence 99995 68888887543 45899999999999999999999999999999999999998 99999999998543211
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 906 (931)
.......+++.|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 153 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 153 -------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred -------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 01112457889999998754 4567899999999999999999999998887776
Q ss_pred HHHHH
Q 002356 907 FANIL 911 (931)
Q Consensus 907 ~~~I~ 911 (931)
+..+.
T Consensus 208 ~~~~~ 212 (282)
T cd07831 208 IAKIH 212 (282)
T ss_pred HHHHH
Confidence 66554
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=8.9e-29 Score=274.45 Aligned_cols=213 Identities=27% Similarity=0.423 Sum_probs=180.1
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
..|+..+.||.|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|+|++++++++......|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 46889999999999999999999999999999987543334455667888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. ++|.+++.... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------ 166 (308)
T cd06634 95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 166 (308)
T ss_pred EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec------
Confidence 9995 68888775442 458999999999999999999999999999999999999999999999999884321
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
......|++.|+|||.+. ...++.++|||||||++|+|++|..||...+..+
T Consensus 167 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 167 -------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred -------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 012345888999999985 3457789999999999999999999998776666
Q ss_pred HHHHHHcCC
Q 002356 906 TFANILHKD 914 (931)
Q Consensus 906 ~~~~I~~~~ 914 (931)
....+..+.
T Consensus 222 ~~~~~~~~~ 230 (308)
T cd06634 222 ALYHIAQNE 230 (308)
T ss_pred HHHHHhhcC
Confidence 655555543
No 346
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.9e-30 Score=284.62 Aligned_cols=237 Identities=22% Similarity=0.295 Sum_probs=203.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~---~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
|......+.++||+|.||.|+.+.++.. ...||||++..+.... ..+.|.+|+.+|-+|+|||+++||++..+ .
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-q 183 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-Q 183 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-c
Confidence 4556778889999999999999998642 3579999998765432 67889999999999999999999998877 6
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
...||||+++.|||.+.|.+.....|....+..|+.||+.||.||..+++|||||...|+|+-....|||+|||+.+..+
T Consensus 184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccC
Confidence 78899999999999999988666779999999999999999999999999999999999999988999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~ 901 (931)
..... +.......-...|.|||.+....++.++|+|++||+||||++ |..||.|-
T Consensus 264 ~ned~------------------------Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~ 319 (1039)
T KOG0199|consen 264 ENEDM------------------------YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC 319 (1039)
T ss_pred CCCcc------------------------eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC
Confidence 32211 111112224557999999999999999999999999999996 99999999
Q ss_pred CHHHHHHHHHcC-CCCCCCCCcCChhhhh
Q 002356 902 TRQKTFANILHK-DLKFPSSTPRSKEQIR 929 (931)
Q Consensus 902 ~~~~~~~~I~~~-~~~~p~~~~~~~~~~~ 929 (931)
...+++++|-+| .+.-|+.|+....+|+
T Consensus 320 ~g~qIL~~iD~~erLpRPk~csedIY~im 348 (1039)
T KOG0199|consen 320 RGIQILKNIDAGERLPRPKYCSEDIYQIM 348 (1039)
T ss_pred CHHHHHHhccccccCCCCCCChHHHHHHH
Confidence 999999999866 5799999998888775
No 347
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=1e-28 Score=268.08 Aligned_cols=212 Identities=17% Similarity=0.313 Sum_probs=169.2
Q ss_pred ccccccCcEEEEEEEEecC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccC
Q 002356 675 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~--~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ 752 (931)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++++......|+||||+.
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3589999999999976433 3456677665432 23345678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 753 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 753 ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+++|.+++.... ...++...++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~----- 153 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED----- 153 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch-----
Confidence 999999997542 2346777888999999999999999999999999999999999999999999874321000
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~ 902 (931)
.........|++.|+|||++.. ..++.++|||||||++|+|++ |..||...+
T Consensus 154 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 154 --------------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred --------------------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0011124568899999999853 235678999999999999996 688998888
Q ss_pred HHHHHHHHHcC
Q 002356 903 RQKTFANILHK 913 (931)
Q Consensus 903 ~~~~~~~I~~~ 913 (931)
..+.+..++++
T Consensus 214 ~~~~~~~~~~~ 224 (268)
T cd05086 214 DREVLNHVIKD 224 (268)
T ss_pred HHHHHHHHHhh
Confidence 88888777654
No 348
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=1.1e-28 Score=271.62 Aligned_cols=209 Identities=29% Similarity=0.482 Sum_probs=178.5
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|.....||+|+||.||++.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++...++.|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44457799999999999999999999999987543 233456688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+++++|.+++... .+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~------ 169 (292)
T cd06657 99 LEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 169 (292)
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc------
Confidence 9999999987542 4899999999999999999999999999999999999999999999999987433210
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I 910 (931)
........|++.|+|||.+.+..++.++|+||||+++|+|++|+.||.+....+.+..+
T Consensus 170 ---------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~ 228 (292)
T cd06657 170 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228 (292)
T ss_pred ---------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 01112346889999999998888899999999999999999999999988777666655
Q ss_pred Hc
Q 002356 911 LH 912 (931)
Q Consensus 911 ~~ 912 (931)
..
T Consensus 229 ~~ 230 (292)
T cd06657 229 RD 230 (292)
T ss_pred Hh
Confidence 43
No 349
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=7.9e-29 Score=268.22 Aligned_cols=197 Identities=21% Similarity=0.323 Sum_probs=162.1
Q ss_pred ccccccCcEEEEEEEEec------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC
Q 002356 675 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~------------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (931)
+.||.|+||.||++.... ....+++|++... .......+..|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2336888887543 2334456788999999999999999999999989
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-------EEEEec
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 815 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~-------vkL~DF 815 (931)
..++||||+++++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999999887543 35899999999999999999999999999999999999986664 899999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-CCCCCChhhHHHHHHHHHHHH-c
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 893 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell-~ 893 (931)
|++.... ......|++.|+|||.+. +..++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVL-------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCcccc-------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 9874321 011235788999999986 466888999999999999998 5
Q ss_pred CCCCCCCCCHHHH
Q 002356 894 GYTPFRGKTRQKT 906 (931)
Q Consensus 894 G~~Pf~~~~~~~~ 906 (931)
|..||......+.
T Consensus 206 ~~~p~~~~~~~~~ 218 (262)
T cd05077 206 GEIPLKDKTLAEK 218 (262)
T ss_pred CCCCCCCcchhHH
Confidence 9999987655443
No 350
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=7.8e-29 Score=271.05 Aligned_cols=212 Identities=24% Similarity=0.434 Sum_probs=179.2
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc---CCCCccceeEEEEeCCe----
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 743 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~---- 743 (931)
|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++++ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7788999999999999999988899999999975433 222334566788777666 69999999999987776
Q ss_pred -EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 744 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 744 -~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
++++|||+. ++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589998877554468999999999999999999999999999999999999999999999999985532
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
.. .......+++.|+|||++.+..++.++|+|||||++|+|++|++||.+.+
T Consensus 159 ~~----------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FE----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CC----------------------------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 11 01112357889999999998889999999999999999999999999998
Q ss_pred HHHHHHHHHc
Q 002356 903 RQKTFANILH 912 (931)
Q Consensus 903 ~~~~~~~I~~ 912 (931)
..+.+.++..
T Consensus 211 ~~~~~~~~~~ 220 (287)
T cd07838 211 EADQLDKIFD 220 (287)
T ss_pred hHHHHHHHHH
Confidence 8888877764
No 351
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=6.8e-29 Score=270.62 Aligned_cols=196 Identities=19% Similarity=0.290 Sum_probs=160.8
Q ss_pred cccccCcEEEEEEEEecC------------------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCc
Q 002356 676 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~------------------------~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (931)
.||+|+||.||++....+ ...+|+|.+... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999875321 246888987643 22344567889999999999999
Q ss_pred cceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---
Q 002356 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 808 (931)
Q Consensus 732 v~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g--- 808 (931)
+++++++......|+||||+++++|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999998653 24589999999999999999999999999999999999997544
Q ss_pred ----cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHH
Q 002356 809 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 883 (931)
Q Consensus 809 ----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwS 883 (931)
.+|++|||++..... .....+++.|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 389999998743210 012247788999998865 56788999999
Q ss_pred HHHHHHHHH-cCCCCCCCCCHHHH
Q 002356 884 LGILLYEML-YGYTPFRGKTRQKT 906 (931)
Q Consensus 884 lGvil~ell-~G~~Pf~~~~~~~~ 906 (931)
|||++|+|+ +|+.||.+....+.
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHH
Confidence 999999985 79999987766554
No 352
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=6.3e-29 Score=271.65 Aligned_cols=213 Identities=26% Similarity=0.432 Sum_probs=180.6
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeEEEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 748 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lVm 748 (931)
|++.+.||.|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.++|||++++++++... +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 778999999999999999999899999999998753 2334446678899999999999999999999887 8999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9995 58988887542 4589999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356789999998765 45788999999999999999999999998887777
Q ss_pred HHHHc
Q 002356 908 ANILH 912 (931)
Q Consensus 908 ~~I~~ 912 (931)
..+.+
T Consensus 212 ~~~~~ 216 (287)
T cd07840 212 EKIFE 216 (287)
T ss_pred HHHHH
Confidence 77665
No 353
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=2e-28 Score=261.43 Aligned_cols=211 Identities=32% Similarity=0.534 Sum_probs=183.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
+|++.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++||||+++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 48889999999999999999988899999999876532 456778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+++++|.+++.... ..++...+..++.|++.||.|||.+|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987653 458999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02345688999999999888888999999999999999999999988755555444
Q ss_pred HHc
Q 002356 910 ILH 912 (931)
Q Consensus 910 I~~ 912 (931)
+..
T Consensus 209 ~~~ 211 (253)
T cd05122 209 IAT 211 (253)
T ss_pred HHh
Confidence 443
No 354
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=4.1e-29 Score=280.83 Aligned_cols=212 Identities=28% Similarity=0.452 Sum_probs=177.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (931)
..+|.+.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3589999999999999999999999999999999875422 333455677899999999999999999987643 3
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 83 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 83 DVYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred cEEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 589999999 57899888764 359999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
... .......|+..|+|||.+.. ..++.++|||||||++|+|++|++||.+.
T Consensus 160 ~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 160 EKG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred CCc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 110 11123467889999999865 45888999999999999999999999887
Q ss_pred CHHHHHHHH
Q 002356 902 TRQKTFANI 910 (931)
Q Consensus 902 ~~~~~~~~I 910 (931)
+....+..+
T Consensus 213 ~~~~~~~~~ 221 (337)
T cd07858 213 DYVHQLKLI 221 (337)
T ss_pred ChHHHHHHH
Confidence 765555444
No 355
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=1.3e-28 Score=267.12 Aligned_cols=201 Identities=27% Similarity=0.397 Sum_probs=168.9
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.+.....||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++|+||+++++++...+.+++|||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 344446799999999999999999999999988654 23455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~~~~ 826 (931)
|+.+++|.+++.... ..+ +...+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~- 163 (268)
T cd06624 86 QVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN- 163 (268)
T ss_pred cCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-
Confidence 999999999997642 224 88889999999999999999999999999999999976 6799999999885432100
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC--CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
.......|++.|+|||++.... ++.++|+||||+++|+|++|.+||...
T Consensus 164 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~ 214 (268)
T cd06624 164 --------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214 (268)
T ss_pred --------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence 0112335889999999986543 778999999999999999999999754
No 356
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=279.33 Aligned_cols=234 Identities=22% Similarity=0.353 Sum_probs=198.1
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (931)
+.....++.++||.|.||.||.+....- .--||||.-+.+. +.+....|..|..+|++++||||+++++++..
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE- 462 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence 3444556678899999999999987432 3468888876643 45567889999999999999999999998876
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...|||||+++-|.|..+|+.+. ..++......++.||+.||.|||++.+|||||...|||+.+..-|||+|||+++..
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 56899999999999999999875 45899999999999999999999999999999999999999999999999999776
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~ 900 (931)
.+..- .......-...|||||.+.-..++.++|||-|||+|||++. |.-||.+
T Consensus 542 ed~~y--------------------------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg 595 (974)
T KOG4257|consen 542 EDDAY--------------------------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG 595 (974)
T ss_pred cccch--------------------------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence 43211 11222334568999999999999999999999999999995 9999999
Q ss_pred CCHHHHHHHHHcCC-CCCCCCCcCChhhhh
Q 002356 901 KTRQKTFANILHKD-LKFPSSTPRSKEQIR 929 (931)
Q Consensus 901 ~~~~~~~~~I~~~~-~~~p~~~~~~~~~~~ 929 (931)
-...+++-.|.+|. +..|++||.....||
T Consensus 596 vkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 596 VKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 99999999999984 899999998777654
No 357
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=4.9e-29 Score=273.33 Aligned_cols=204 Identities=26% Similarity=0.400 Sum_probs=170.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (931)
.++|.....||+|+||.||++.+..+++.||+|.+.+... ......+..|+.++.++. ||||+++++++......++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3578888999999999999999999999999999876432 244567888999999995 9999999999999999999
Q ss_pred EEeccCCCCHHHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 747 ITDYCPGGELFLLLD---RQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 747 VmE~~~ggsL~~~l~---~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
+|||+ +++|.++.. ......+++..+..++.|++.||+|||+. ||+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99999 456655432 22335699999999999999999999985 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC---CCCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
.. .......|++.|+|||++... .++.++|||||||++|+|++|++||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 10 011233588999999999766 68889999999999999999999997
Q ss_pred CCC
Q 002356 900 GKT 902 (931)
Q Consensus 900 ~~~ 902 (931)
...
T Consensus 212 ~~~ 214 (288)
T cd06616 212 KWN 214 (288)
T ss_pred hcc
Confidence 654
No 358
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-30 Score=292.44 Aligned_cols=238 Identities=25% Similarity=0.375 Sum_probs=208.1
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~---~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (931)
..++.....+.+.||.|-||.|++++.+..+ ..||||.++..- .......|..|+.||-+++||||++|-++...
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3567778899999999999999999998766 479999998653 34566789999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...+.||+|||++|+|..+|..+.++ |+..++..+++.|+.|+.||-++|+|||||...|||++.+..+|++|||+++.
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceee
Confidence 99999999999999999999987655 88899999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccc--CCcccchhhhcCCCCCChhhHHHHHHHHHHHH-cCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTP 897 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~G~~P 897 (931)
....+... ..+.-| ..+|.|||++...+++.++||||+|++|||.+ +|..|
T Consensus 781 ledd~~~~--------------------------ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP 834 (996)
T KOG0196|consen 781 LEDDPEAA--------------------------YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 834 (996)
T ss_pred cccCCCcc--------------------------ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence 54332110 111111 25899999999999999999999999999988 69999
Q ss_pred CCCCCHHHHHHHHHcC-CCCCCCCCcCChhhhhc
Q 002356 898 FRGKTRQKTFANILHK-DLKFPSSTPRSKEQIRF 930 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~-~~~~p~~~~~~~~~~~~ 930 (931)
|+..+.+++++.|.+| .+.-|-++|....|||+
T Consensus 835 YWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMl 868 (996)
T KOG0196|consen 835 YWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLML 868 (996)
T ss_pred ccccchHHHHHHHHhccCCCCCCCCcHHHHHHHH
Confidence 9999999999999998 57888899998888875
No 359
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-30 Score=282.72 Aligned_cols=203 Identities=32% Similarity=0.525 Sum_probs=176.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhcC---CCCccceeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLD---HPFVPALYASF 738 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-----~~~~~~~~E~~il~~l~---hpnIv~l~~~~ 738 (931)
+..+|+.++.||.|+||.|++|.++.+...|++|.+.|...... ...-.+-.||.||..|+ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 34579999999999999999999999999999999987643211 11223446999999997 99999999999
Q ss_pred EeCCeEEEEEecc-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 739 QTKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 739 ~~~~~~~lVmE~~-~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
++++++||+||-. +|.+|++++...+. +++.+++.|++|++.|+++||+.||||||||-+|++++.+|-+||+|||.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 9999999999976 46799999988644 99999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCC-CChhhHHHHHHHHHHHHcCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~ 896 (931)
+.... +.....++||..|.|||++.+.+| +..-|||+||++||.+++..-
T Consensus 717 aa~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 717 AAYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred hhhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 85432 223457899999999999998877 557999999999999999999
Q ss_pred CCCC
Q 002356 897 PFRG 900 (931)
Q Consensus 897 Pf~~ 900 (931)
||..
T Consensus 768 pyyn 771 (772)
T KOG1152|consen 768 PYYN 771 (772)
T ss_pred CCcC
Confidence 9863
No 360
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=9e-29 Score=276.90 Aligned_cols=206 Identities=28% Similarity=0.464 Sum_probs=174.4
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-CCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~ 745 (931)
..++|++.+.||.|+||.||++.+..+++.||+|.+.+... .......+..|+.+++.++||||++++++|.. ....|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 35689999999999999999999999999999998865422 23345667789999999999999999999865 56789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
++|||+ +++|..++... .++...+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 87 lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-- 160 (328)
T cd07856 87 FVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-- 160 (328)
T ss_pred EEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC--
Confidence 999999 77999888642 378899999999999999999999999999999999999999999999998843210
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
......+++.|+|||.+.+ ..++.++|+|||||++|+|++|++||.+....
T Consensus 161 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~ 212 (328)
T cd07856 161 ----------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV 212 (328)
T ss_pred ----------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 1123457889999998765 56788999999999999999999999877654
Q ss_pred HHH
Q 002356 905 KTF 907 (931)
Q Consensus 905 ~~~ 907 (931)
..+
T Consensus 213 ~~~ 215 (328)
T cd07856 213 NQF 215 (328)
T ss_pred HHH
Confidence 433
No 361
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=1.2e-28 Score=270.43 Aligned_cols=226 Identities=41% Similarity=0.709 Sum_probs=182.7
Q ss_pred CccccccccccCcEEEEEEEEe---cCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (931)
+|++.+.||.|+||.||++.+. .++..||+|++.+.... .......+.+|+.+++.+ +||||+++++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4888999999999999999864 45789999998764322 223446678899999999 699999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+.+++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998764 34899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. ........|++.|++||.+.+.. ++.++|+||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 01122356899999999987654 6789999999999999999999996432
Q ss_pred ----HHHHHHHHHcCCCCCCCCCcC
Q 002356 903 ----RQKTFANILHKDLKFPSSTPR 923 (931)
Q Consensus 903 ----~~~~~~~I~~~~~~~p~~~~~ 923 (931)
..++.+.+.......|...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd05583 213 EQNSQSEISRRILKSKPPFPKTMSA 237 (288)
T ss_pred ccchHHHHHHHHHccCCCCCcccCH
Confidence 345555555555555555443
No 362
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=2.1e-28 Score=262.45 Aligned_cols=214 Identities=29% Similarity=0.434 Sum_probs=183.3
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC--CeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV 747 (931)
+|++.+.||+|++|.||++.+..+++.+++|++..... .......+.+|+.+++.++||||+++++.+... ..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 48888999999999999999998999999999876532 245567888999999999999999999999988 899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|||+++++|.+++.... .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998754 5999999999999999999999999999999999999999999999999998654321100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-HHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 906 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-~~~~ 906 (931)
.......++..|+|||.+....++.++|+||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01224568899999999988889999999999999999999999998765 3344
Q ss_pred HHHHH
Q 002356 907 FANIL 911 (931)
Q Consensus 907 ~~~I~ 911 (931)
...+.
T Consensus 213 ~~~~~ 217 (260)
T cd06606 213 LYKIG 217 (260)
T ss_pred HHhcc
Confidence 44444
No 363
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=1.3e-28 Score=265.12 Aligned_cols=195 Identities=20% Similarity=0.269 Sum_probs=164.2
Q ss_pred ccccccCcEEEEEEEEecCC----------eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 675 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~----------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998776 357888765432 125678889999999999999999999887 778
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-------cEEEEeccC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 817 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-------~vkL~DFG~ 817 (931)
++||||+.+++|.+++..... .++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999987542 589999999999999999999999999999999999999887 799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC--CCCChhhHHHHHHHHHHHHc-C
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 894 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~-G 894 (931)
+..... .....++..|+|||++... .++.++|+|||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854321 1123467789999999876 78889999999999999998 6
Q ss_pred CCCCCCCCHHHH
Q 002356 895 YTPFRGKTRQKT 906 (931)
Q Consensus 895 ~~Pf~~~~~~~~ 906 (931)
..||...+..+.
T Consensus 204 ~~p~~~~~~~~~ 215 (259)
T cd05037 204 EEPLSTLSSSEK 215 (259)
T ss_pred CCCcccCCchhH
Confidence 888977654433
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=1.3e-28 Score=276.08 Aligned_cols=216 Identities=25% Similarity=0.394 Sum_probs=176.1
Q ss_pred CccccccccccCcEEEEEEEEecC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe----CC
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 742 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~--~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----~~ 742 (931)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 588999999999999999999888 8899999986532 2233455677899999999 69999999987532 35
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 743 ~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
.+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 678999999 57899988654 458999999999999999999999999999999999999999999999999986442
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
..... .........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 11100 0011234578999999998865 46788999999999999999999999988
Q ss_pred CHHHHHHHHHc
Q 002356 902 TRQKTFANILH 912 (931)
Q Consensus 902 ~~~~~~~~I~~ 912 (931)
+....+..++.
T Consensus 214 ~~~~~~~~~~~ 224 (332)
T cd07857 214 DYVDQLNQILQ 224 (332)
T ss_pred CHHHHHHHHHH
Confidence 77666665554
No 365
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.7e-28 Score=272.70 Aligned_cols=206 Identities=23% Similarity=0.325 Sum_probs=169.3
Q ss_pred CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHHH
Q 002356 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (931)
Q Consensus 681 ~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l 760 (931)
++|.||+++...+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..|++|||+.+++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44667777777799999999987642 24456778999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 002356 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (931)
Q Consensus 761 ~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (931)
.......+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~------------- 157 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR------------- 157 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc-------------
Confidence 8754456899999999999999999999999999999999999999999999999988543211100
Q ss_pred CCCCccccccccccccccccCCcccchhhhcC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
............++..|+|||++.. ..++.++|+|||||++|+|++|+.||........+
T Consensus 158 -------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~ 219 (314)
T cd08216 158 -------QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML 219 (314)
T ss_pred -------ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0001112234567889999999976 35788999999999999999999999876654443
No 366
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=277.70 Aligned_cols=237 Identities=23% Similarity=0.345 Sum_probs=195.4
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (931)
.+..+...++++||+|.||.|.+|... .+.+||+|.++... +......|..|+++|.+|+||||+.++++|..++.+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 355677889999999999999999873 36899999998763 344467899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
++||||+++|+|.+++.......+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++-....
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999999998763333455566779999999999999999999999999999999999999999999743211
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc--CCCCCCCCC
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY--GYTPFRGKT 902 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~--G~~Pf~~~~ 902 (931)
+ -++..+..+-..+|||||.+.-++++.++|+|+||++|||+++ ..-||...+
T Consensus 691 ~-------------------------yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt 745 (807)
T KOG1094|consen 691 D-------------------------YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT 745 (807)
T ss_pred C-------------------------ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence 1 1122345567789999999999999999999999999999885 789999998
Q ss_pred HHHHHHHHH---cC--C---CCCCCCCcCChhhhh
Q 002356 903 RQKTFANIL---HK--D---LKFPSSTPRSKEQIR 929 (931)
Q Consensus 903 ~~~~~~~I~---~~--~---~~~p~~~~~~~~~~~ 929 (931)
.+++.++.- .. . +..|..+|.....++
T Consensus 746 ~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelm 780 (807)
T KOG1094|consen 746 DEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELM 780 (807)
T ss_pred HHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHH
Confidence 888877653 22 2 356666666555544
No 367
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=1.5e-28 Score=268.49 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=173.4
Q ss_pred CCCccccccccccCcEEEEEEEEe----cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe--C
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (931)
..+|++.+.||+|+||.||++... .++..||+|.+...... .....+.+|+.+++.+.||||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357899999999999999999864 34789999998765321 356778999999999999999999998876 6
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
...+++|||+++++|.+++.... ..++...+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999998654 24899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
...... ........++..|++||.+....++.++|+|||||++|+|++|..||...
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 311000 00111223556799999998888999999999999999999999998754
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=9.7e-29 Score=273.75 Aligned_cols=226 Identities=26% Similarity=0.373 Sum_probs=179.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe-------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (931)
.++|++.+.||.|+||.||++.+..+++.+|+|.+....... .....+.+|+++++.++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999986543222 122356789999999999999999988753
Q ss_pred -CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 741 -~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
...+|+||||+ +++|...+... ...+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 33579999999 45777777643 3459999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
............ ............|++.|+|||.+.+. .++.++|||||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPKGG----------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCcccccC----------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 543211100000 00011122345789999999988654 5788999999999999999999999
Q ss_pred CCCCHHHHHHHHHc
Q 002356 899 RGKTRQKTFANILH 912 (931)
Q Consensus 899 ~~~~~~~~~~~I~~ 912 (931)
.+.+....++.+..
T Consensus 228 ~~~~~~~~~~~~~~ 241 (311)
T cd07866 228 QGKSDIDQLHLIFK 241 (311)
T ss_pred CCCCHHHHHHHHHH
Confidence 99888777776654
No 369
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=5.6e-29 Score=278.65 Aligned_cols=216 Identities=25% Similarity=0.405 Sum_probs=184.2
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----eE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (931)
+|++.+.||.|+||.||+|.+..++..||+|.+.... ......+.+..|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999998889999999987642 22445567889999999999999999999987765 78
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|++|||+. ++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 68999887643 5999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
... ........+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112234688999999999887 788999999999999999999999999998
Q ss_pred HHHHHHHHcC
Q 002356 904 QKTFANILHK 913 (931)
Q Consensus 904 ~~~~~~I~~~ 913 (931)
.+.+..+...
T Consensus 213 ~~~~~~i~~~ 222 (330)
T cd07834 213 IDQLNLIVEV 222 (330)
T ss_pred HHHHHHHHHh
Confidence 8888777653
No 370
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=9.8e-29 Score=277.68 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=178.8
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe--CCeE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT--KTHV 744 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~--~~~~ 744 (931)
.++|++.+.||+|+||.||++.+..++..+|+|.+.+.. ........+..|+.+++.+ +||||+++++++.. ....
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2233445677899999999 99999999999864 3468
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+||||+. ++|..++... .+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 6999988753 5888899999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
... ..........|++.|+|||.+.+ ..++.++|+|||||++|+|++|++||.+.+.
T Consensus 161 ~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EEN----------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred ccc----------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 110 00012234568999999998865 4577899999999999999999999998777
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
.+.+..+..
T Consensus 219 ~~~~~~~~~ 227 (337)
T cd07852 219 LNQLEKIIE 227 (337)
T ss_pred HHHHHHHHH
Confidence 666655544
No 371
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=1.4e-28 Score=271.56 Aligned_cols=217 Identities=25% Similarity=0.359 Sum_probs=178.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (931)
..++|++.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45789999999999999999999999999999999875432 2223345678999999999999999999887654
Q ss_pred ------eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEecc
Q 002356 743 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (931)
Q Consensus 743 ------~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG 816 (931)
.+|+||||+++ +|..++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 89999999965 777777654 2358999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~ 895 (931)
++........ .......+++.|+|||.+.+. .++.++|||||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9865421110 011123467889999988653 4688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
+||...+..+.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 216 PIFQANQELAQLELISR 232 (302)
T ss_pred CCCCCCChHHHHHHHHH
Confidence 99998877766666554
No 372
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=275.92 Aligned_cols=228 Identities=24% Similarity=0.323 Sum_probs=179.8
Q ss_pred CCccc-cccccccCcEEEEEEEEecCCeEEEEEEeecccccChH-----------HHHHHHHHHHHHHhcCCCCccceeE
Q 002356 669 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 736 (931)
Q Consensus 669 ~~y~i-~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hpnIv~l~~ 736 (931)
++|.. .+.||.|+||.||++.+..+++.||+|.+......... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56764 57799999999999999999999999998754322100 1124678999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEecc
Q 002356 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (931)
Q Consensus 737 ~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG 816 (931)
++...+..|+||||+. ++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999995 6999998764 348999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~ 895 (931)
++.....+........ .. ............+++.|+|||.+.+. .++.++|+|||||++|+|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSK------DE-------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeecccccccccccc------cc-------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9865532111000000 00 00000111234578899999998764 4688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
+||.+.+..+.+..+..
T Consensus 232 ~p~~~~~~~~~~~~i~~ 248 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFE 248 (335)
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 99999888777766644
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=1.2e-28 Score=277.54 Aligned_cols=209 Identities=29% Similarity=0.474 Sum_probs=174.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|.+.+.||.|+||.||++.+..++..||+|.+.+... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999999998999999999876422 223345678899999999999999999998654
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
..+|+||||+ ..+|..++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 93 QDFYLVMPYM-QTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ceEEEEeccc-ccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 3569999999 457776653 24899999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......|++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+
T Consensus 168 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 168 DA------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred CC------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123467889999999876 4578899999999999999999999998
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+....+..+..
T Consensus 218 ~~~~~~~~~~~~ 229 (342)
T cd07879 218 KDYLDQLTQILK 229 (342)
T ss_pred CCHHHHHHHHHH
Confidence 887766666554
No 374
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.3e-28 Score=277.24 Aligned_cols=215 Identities=25% Similarity=0.397 Sum_probs=175.7
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC------
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (931)
.++|.+.+.||.|+||.||++.+..++..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 468999999999999999999999999999999986542 24456678899999999999999999776543
Q ss_pred --------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEE
Q 002356 742 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 812 (931)
Q Consensus 742 --------~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL 812 (931)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 46899999995 689888864 24899999999999999999999999999999999999974 557899
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHH
Q 002356 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 891 (931)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~el 891 (931)
+|||++......... ........|+..|+|||.+.. ..++.++|||||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYSH------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCcccc------------------------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 999998543211000 001122357889999998754 4577899999999999999
Q ss_pred HcCCCCCCCCCHHHHHHHHHcC
Q 002356 892 LYGYTPFRGKTRQKTFANILHK 913 (931)
Q Consensus 892 l~G~~Pf~~~~~~~~~~~I~~~ 913 (931)
++|+.||.+.+..+.+..++..
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999988877777666553
No 375
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=1.4e-28 Score=265.39 Aligned_cols=217 Identities=30% Similarity=0.480 Sum_probs=180.9
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 589999999999999999999887777777776543221 122344566799999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 748 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 748 mE~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
|||+.+++|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++ ++.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee-cCCEeecccCceeecCCC-
Confidence 999999999998864 2234589999999999999999999999999999999999997 467999999998543211
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 905 (931)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.+...
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 111224568899999999988888899999999999999999999999888777
Q ss_pred HHHHHHcCC
Q 002356 906 TFANILHKD 914 (931)
Q Consensus 906 ~~~~I~~~~ 914 (931)
....+..+.
T Consensus 213 ~~~~~~~~~ 221 (260)
T cd08222 213 VVLRIVEGP 221 (260)
T ss_pred HHHHHHcCC
Confidence 777776654
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-29 Score=285.17 Aligned_cols=215 Identities=30% Similarity=0.452 Sum_probs=187.5
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEE-----e
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~ 740 (931)
..+.|.+...||.|.+|.||+++.+.+++..|+|++..... .-..+..|.++|+.+ +|||++.+|++|. .
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 45679999999999999999999999999999999876543 235567788999888 7999999999986 3
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
++.+|||||||.|||..++++.-.+..+.++.+..|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||++..
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 67899999999999999999876677899999999999999999999999999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-----CCCChhhHHHHHHHHHHHHcCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ell~G~ 895 (931)
.. .+....++++|||.|||||++.+. .|+.++|+||||++-.||.-|.
T Consensus 173 ld---------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~ 225 (953)
T KOG0587|consen 173 LD---------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGA 225 (953)
T ss_pred ee---------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCC
Confidence 42 122345688999999999999653 4677999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc
Q 002356 896 TPFRGKTRQKTFANILH 912 (931)
Q Consensus 896 ~Pf~~~~~~~~~~~I~~ 912 (931)
+|+.+..+...+.+|-.
T Consensus 226 PPl~DmHPmraLF~IpR 242 (953)
T KOG0587|consen 226 PPLCDMHPMRALFLIPR 242 (953)
T ss_pred CCccCcchhhhhccCCC
Confidence 99999988777655543
No 377
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=1.2e-28 Score=277.83 Aligned_cols=211 Identities=28% Similarity=0.480 Sum_probs=180.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (931)
.++|++.+.||.|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 568999999999999999999999999999999886542 223345667789999999999999999988866554
Q ss_pred --EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 744 --~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
.|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899999875 34899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.. ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cc------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 21 0123457889999999865 3677899999999999999999999998
Q ss_pred CCHHHHHHHHHcC
Q 002356 901 KTRQKTFANILHK 913 (931)
Q Consensus 901 ~~~~~~~~~I~~~ 913 (931)
.+..+.+..+.+.
T Consensus 219 ~~~~~~~~~i~~~ 231 (343)
T cd07851 219 SDHIDQLKRIMNL 231 (343)
T ss_pred CChHHHHHHHHHh
Confidence 8887777776653
No 378
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=2.1e-28 Score=267.16 Aligned_cols=212 Identities=27% Similarity=0.477 Sum_probs=180.2
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|++.+.||.|++|.||++.+..+++.+++|.+..... .......+.+|+.+++.++||||+++++++...+.+++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999988999999999876532 223456778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+. ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 95 58888887643 458999999999999999999999999999999999999999999999999885442110
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223578899999999776 678899999999999999999999998887766666
Q ss_pred HHc
Q 002356 910 ILH 912 (931)
Q Consensus 910 I~~ 912 (931)
+..
T Consensus 211 ~~~ 213 (283)
T cd05118 211 IFR 213 (283)
T ss_pred HHH
Confidence 543
No 379
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=5.3e-28 Score=266.50 Aligned_cols=220 Identities=28% Similarity=0.438 Sum_probs=178.1
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (931)
...+..++|++.+.||+|+||.||++.+..+++.||+|.+.+... ......+..|+.++..+ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 86 (296)
T cd06618 9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITD 86 (296)
T ss_pred eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence 345677899999999999999999999988899999999876422 23345566677766666 599999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
...|++|||+ +++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++..
T Consensus 87 ~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 87 SDVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred CeEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 9999999999 567877776533 358999999999999999999997 5999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CCChhhHHHHHHHHHHHHcCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~ell~G~~ 896 (931)
..... ......+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.
T Consensus 165 ~~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 216 (296)
T cd06618 165 LVDSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQF 216 (296)
T ss_pred ccCCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCC
Confidence 32100 011234788999999987553 7789999999999999999999
Q ss_pred CCCCC-CHHHHHHHHHcCC
Q 002356 897 PFRGK-TRQKTFANILHKD 914 (931)
Q Consensus 897 Pf~~~-~~~~~~~~I~~~~ 914 (931)
||... ...+.+..+..+.
T Consensus 217 p~~~~~~~~~~~~~~~~~~ 235 (296)
T cd06618 217 PYKNCKTEFEVLTKILQEE 235 (296)
T ss_pred CCCcchhHHHHHHHHhcCC
Confidence 99763 3345666666554
No 380
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.9e-29 Score=248.81 Aligned_cols=206 Identities=24% Similarity=0.394 Sum_probs=173.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC--Ce
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--TH 743 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~ 743 (931)
..++|++++.+|+|.||.||.+....++..+++|++++- ..+.+.+|+.||+.| +||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 457899999999999999999999999999999998653 557899999999999 599999999998754 45
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTS 822 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~ 822 (931)
..+|+||+++.+...+... ++.-.++.++.+++.||.|||++||+|||+||.|++|+... .++|+|+|+|..+.
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999998888776644 78889999999999999999999999999999999998654 79999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCC-CC
Q 002356 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF-RG 900 (931)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf-~~ 900 (931)
. ....+-.+.+..|--||.+.. ..|+..-|+|||||+|..|++.+.|| .|
T Consensus 185 p----------------------------~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 P----------------------------GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred C----------------------------CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 1 223344567788999999865 45788999999999999999988776 46
Q ss_pred CCHHHHHHHHH
Q 002356 901 KTRQKTFANIL 911 (931)
Q Consensus 901 ~~~~~~~~~I~ 911 (931)
.+..+.+-+|.
T Consensus 237 ~dN~DQLVkIa 247 (338)
T KOG0668|consen 237 HDNYDQLVKIA 247 (338)
T ss_pred CCCHHHHHHHH
Confidence 55555554443
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4e-29 Score=280.82 Aligned_cols=210 Identities=31% Similarity=0.484 Sum_probs=179.8
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (931)
..+.|.+...+|.|+||.|..+.+..+++.+++|++.+.. ....+|+.++... +||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4778999999999999999999999999999999997752 2234577666555 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE-ecCCcEEEEeccCCcccCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll-~~~g~vkL~DFG~a~~~~~~ 824 (931)
+|||++.|+.|.+.+...+. +. ..+..|+++|+.|+.|||.+|+|||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999999888876532 33 7777899999999999999999999999999999 68899999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 904 (931)
..+-+-|..|.|||++...+|+.++||||||++||+|++|+.||.+....
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12335678999999999999999999999999999999999999976555
Q ss_pred -HHHHHHHcCCCC
Q 002356 905 -KTFANILHKDLK 916 (931)
Q Consensus 905 -~~~~~I~~~~~~ 916 (931)
+++..|..+.+.
T Consensus 520 ~ei~~~i~~~~~s 532 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS 532 (612)
T ss_pred HHHHHhhcCCccc
Confidence 788888777665
No 382
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=2.6e-28 Score=266.17 Aligned_cols=212 Identities=28% Similarity=0.454 Sum_probs=180.7
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|++.+.||+|++|.||++.+..+++.||+|.+.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 677889999999999999999999999999997653 2233446677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 96 69999998753 359999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 909 (931)
.......++..|+|||.+... .++.++|+|||||++|+|++|.+||.+.+..+.+.+
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011223467889999999776 788899999999999999999999999887777666
Q ss_pred HHc
Q 002356 910 ILH 912 (931)
Q Consensus 910 I~~ 912 (931)
+..
T Consensus 211 ~~~ 213 (282)
T cd07829 211 IFQ 213 (282)
T ss_pred HHH
Confidence 653
No 383
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=3e-28 Score=266.21 Aligned_cols=211 Identities=29% Similarity=0.460 Sum_probs=177.8
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEEe
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVmE 749 (931)
|++.+.||.|++|.||++....+++.+++|.+..... ........+|+..++.+. ||||+++++++...+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY--SWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc--chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 7788999999999999999988999999999865422 122234457889999998 9999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (931)
|+ +++|.+++.......++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999988765456899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002356 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (931)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~ 908 (931)
.......|+..|+|||++.. ..++.++|+||||+++|+|++|++||...+..+.+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01123468889999998854 456889999999999999999999999887776666
Q ss_pred HHHc
Q 002356 909 NILH 912 (931)
Q Consensus 909 ~I~~ 912 (931)
++..
T Consensus 210 ~~~~ 213 (283)
T cd07830 210 KICS 213 (283)
T ss_pred HHHH
Confidence 5543
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.3e-30 Score=255.87 Aligned_cols=220 Identities=24% Similarity=0.342 Sum_probs=181.1
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEe------
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 740 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------ 740 (931)
..+.|..+..||+|.||.||+++.+.+++.||+|.+-...-.+. ......+|+++|+.|+|+|++.+++++..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG-fpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC-CcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 45689999999999999999999999999999986532211111 12345689999999999999999887742
Q ss_pred --CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 741 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 741 --~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
...+|+||.+| .-+|..+|... ...++..+++.++.+++.||.|+|.+.|+|||+||.|+||+.+|.+||+|||++
T Consensus 94 r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 94 RDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 34589999999 56888888654 356999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+.++.+..... ......+-|.+|.+||.+.+. .|+++.|||..||+|.+|.+|.+.
T Consensus 172 r~fs~~~n~~k-----------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 172 RAFSTSKNVVK-----------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cceecccccCC-----------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence 76653322110 112334679999999999875 588999999999999999999999
Q ss_pred CCCCCHHHHHHHHHc
Q 002356 898 FRGKTRQKTFANILH 912 (931)
Q Consensus 898 f~~~~~~~~~~~I~~ 912 (931)
|++.+..+.+..|..
T Consensus 229 mqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 229 MQGNTEQQQLHLISQ 243 (376)
T ss_pred ccCChHHHHHHHHHH
Confidence 999999988888754
No 385
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=4.7e-28 Score=258.05 Aligned_cols=181 Identities=32% Similarity=0.456 Sum_probs=155.5
Q ss_pred cCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHH
Q 002356 680 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 759 (931)
Q Consensus 680 G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~ 759 (931)
|.+|.||+|.+..+++.||+|.+.+.. ...+|...+....||||+++++++.....+|+||||+.|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 889999999999999999999987642 223455555566799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcc
Q 002356 760 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 839 (931)
Q Consensus 760 l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 839 (931)
+.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||.+.....
T Consensus 76 l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~---------------- 137 (237)
T cd05576 76 ISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED---------------- 137 (237)
T ss_pred HHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----------------
Confidence 87653 489999999999999999999999999999999999999999999999998743221
Q ss_pred cCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 840 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
......++..|+|||.+....++.++|+|||||++|+|++|..||..
T Consensus 138 --------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 138 --------------SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred --------------ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 01123456789999999888889999999999999999999988764
No 386
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1e-29 Score=255.98 Aligned_cols=213 Identities=28% Similarity=0.436 Sum_probs=179.1
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCC-----eE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (931)
+.+.-+.||.|+||.||.+.+..+|+.+|+|.+.. ........+++.+|+++|...+|.|++..+++..... .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 34455779999999999999999999999998754 3445566788999999999999999999999876432 35
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 002356 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (931)
Q Consensus 745 ~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~ 824 (931)
|+++|++ ..+|..++-. .+.++.+.++-+++||+.||.|||+.||.||||||.|+|++++-.+||||||+++....+
T Consensus 133 YV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 7889999 7788887765 356999999999999999999999999999999999999999999999999999765422
Q ss_pred CCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
.... -..-+-|-.|.|||++++. .|+.+.||||.|||+.||+..+..|+..++
T Consensus 210 ~~~h--------------------------MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 DRLN--------------------------MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hhhh--------------------------hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 2111 1123567899999999886 478899999999999999999999999998
Q ss_pred HHHHHHHHc
Q 002356 904 QKTFANILH 912 (931)
Q Consensus 904 ~~~~~~I~~ 912 (931)
-+.++.|.+
T Consensus 264 iqQL~lItd 272 (449)
T KOG0664|consen 264 IEQLQMIID 272 (449)
T ss_pred HHHHHHHHH
Confidence 888877754
No 387
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.7e-26 Score=242.35 Aligned_cols=218 Identities=37% Similarity=0.603 Sum_probs=185.7
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
|.+.+.||.|++|.||++.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67788999999999999999888999999998765322 2567888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (931)
+.+++|.+++...... +++..+..++.+++.+|.+||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 9999999999875321 7899999999999999999999999999999999999999999999999986542111
Q ss_pred cchhhhhcccCCCCccccccccccccccccCCcccchhhh-cCCCCCChhhHHHHHHHHHHHHcCCCCCCC--CCHHHHH
Q 002356 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG--KTRQKTF 907 (931)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ell~G~~Pf~~--~~~~~~~ 907 (931)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+...+.
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0012234678899999999 666778899999999999999999999987 4555888
Q ss_pred HHHHcCCCCC
Q 002356 908 ANILHKDLKF 917 (931)
Q Consensus 908 ~~I~~~~~~~ 917 (931)
++|..+....
T Consensus 212 ~~~~~~~~~~ 221 (225)
T smart00221 212 DVWSFGVPLL 221 (225)
T ss_pred HHHhcCCccc
Confidence 8888887433
No 388
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=1.3e-27 Score=309.65 Aligned_cols=381 Identities=15% Similarity=0.139 Sum_probs=275.4
Q ss_pred ccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHH
Q 002356 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (931)
Q Consensus 176 ~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~ 255 (931)
.....++.++++++.++.++++++++|+++|. ||+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34445567888999999999999999999998 788999999999999999999999998888888776666666655
Q ss_pred HHHcC-CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHH
Q 002356 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (931)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~ 334 (931)
.+.++ ..+..+.+..++||+.+|+..+.++++|.+|.+.+++++.+|||++|++|++++..
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~------------------ 408 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERL------------------ 408 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHH------------------
Confidence 55544 34677888899999999999999999999999999999999999999999998731
Q ss_pred hHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCC-C-CCCCCCCC--CCCCCcccccccccccch
Q 002356 335 ATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKS-E-NVPPPRRN--SYGGGCRTSMQRISEVPE 409 (931)
Q Consensus 335 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~--~~~~~~~~~~~~~~~~~~ 409 (931)
.+....+.+... .....+.......++......+|+..++..+...- . ..|+.... ....... .....-..+.
T Consensus 409 -~~~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~-~~~~~~~~e~ 486 (1092)
T PRK09776 409 -MERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDAL-QGRSPFKLEF 486 (1092)
T ss_pred -HHHHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHH-hcCCCeeEEE
Confidence 111122222211 22334444455566666666666666553321100 0 00110000 0000000 0112223445
Q ss_pred hcccccCCccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHHHhhccceEEEE
Q 002356 410 KKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVIT 488 (931)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~ 488 (931)
+...++| ..|+........+.++...... ....|||+|++.++++++. ..++.++++++++|+++
T Consensus 487 r~~~~dG-~~w~~~~~~~~~d~~G~~~~~i-------------g~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~ 552 (1092)
T PRK09776 487 RIVVKDG-VRHIRALANRVLNKDGEVERLL-------------GINMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCT 552 (1092)
T ss_pred EEEcCCc-eEEEEEeeEEEECCCCCEEEEE-------------eeeeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEE
Confidence 5577888 8888777766666555443322 3468999999999999775 67999999999999999
Q ss_pred cCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCC--CCHHHHHHHHHHHHcCCc--EEEEEEEEecCCcEEEEEE
Q 002356 489 DPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNLF 564 (931)
Q Consensus 489 D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~--~~~~~~~~l~~~l~~~~~--~~~e~~~~~kdG~~~wv~~ 564 (931)
|.+|+ |+++|+++++++||+.+|++|+++..+.+.. ........+......... +..+....+++|..+|+..
T Consensus 553 D~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 629 (1092)
T PRK09776 553 DMAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHY 629 (1092)
T ss_pred CCCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEE
Confidence 99888 9999999999999999999999966555422 122222334444444433 4567788899999999999
Q ss_pred EEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 565 HLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 565 ~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
+..|+++.+|++.+++++++|||++|+.+++.
T Consensus 630 ~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~L 661 (1092)
T PRK09776 630 SITPLSTLDGENIGSVLVIQDVTESRKMLRQL 661 (1092)
T ss_pred EeeeeecCCCCEEEEEEEEEecchHHHHHHHH
Confidence 99999999999999999999999999865443
No 389
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=2e-28 Score=265.72 Aligned_cols=223 Identities=26% Similarity=0.397 Sum_probs=188.7
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC------CCccceeEEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQ 739 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~ 739 (931)
+..++|.+....|.|-||+|..|.+..-+..||||+|......... =..|++||++|+. -|++.|+..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~Kt----Gl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKT----GLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhh----hhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 3457999999999999999999999988999999999876443333 3469999999953 38999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 817 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~ 817 (931)
..+++|||+|.+ ..+|.++|++.+. -.|....++.|++||+.||..|-..||+|.||||.|||++.. ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999999 8899999987532 358889999999999999999999999999999999999865 4799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
|...+. ..-..+.-+.-|.|||++.+.+|++..|+||.||+||||.||+..
T Consensus 584 A~~~~e-----------------------------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASE-----------------------------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred cccccc-----------------------------ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 854331 111223456679999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCc
Q 002356 898 FRGKTRQKTFANILHKDLKFPSSTP 922 (931)
Q Consensus 898 f~~~~~~~~~~~I~~~~~~~p~~~~ 922 (931)
|.|.+..+++.....-+-.||.-+-
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 9999999999877766666665443
No 390
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6e-27 Score=253.75 Aligned_cols=141 Identities=29% Similarity=0.444 Sum_probs=124.1
Q ss_pred ccccccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-----C---CCc
Q 002356 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PFV 731 (931)
Q Consensus 660 ~~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---pnI 731 (931)
+..|+.++..+|.+.++||.|.|++||++.|..+.+.||||+.+.. +........||++|+++. | .+|
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 4456778889999999999999999999999999999999998753 233455667999999882 3 379
Q ss_pred cceeEEEE----eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEe
Q 002356 732 PALYASFQ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 805 (931)
Q Consensus 732 v~l~~~~~----~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-gIiHrDIKP~NIll~ 805 (931)
|+|++.|. ++.++|||+|++ |.+|..+|.....+.++...++.|++|||.||.|||.. ||||.||||+|||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 99999996 567999999999 99999999987778899999999999999999999986 999999999999995
No 391
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=251.24 Aligned_cols=220 Identities=24% Similarity=0.377 Sum_probs=176.3
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc--CCCCccceeEEEEeCC--
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTKT-- 742 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~~-- 742 (931)
.....++...||+|.||.||+++. +++.||||++... ....+.+|.+|.... .|+||++++..-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356678889999999999999998 5689999998653 557788888887655 8999999998766544
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCCccCCCCCCcEEEecCCcEE
Q 002356 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------QGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 743 --~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------~gIiHrDIKP~NIll~~~g~vk 811 (931)
.++||++|.+.|+|.++|+.+ .++......++.-|+.||+|||+ ..|+|||||..|||+..|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 789999999999999999875 38999999999999999999997 2699999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-CC-----ChhhHHHHH
Q 002356 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-----SAVDWWALG 885 (931)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~-----~~~DiwSlG 885 (931)
|+|||+|..+... .+....-..+||.+|||||++.+.- +. .+.||||+|
T Consensus 357 IaDFGLAl~~~p~-------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEPG-------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecCC-------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 9999999765310 1112223478999999999996642 22 279999999
Q ss_pred HHHHHHHcCC------------CCCC-----CCCHHHHHHHHHc--CCCCCCCCCc
Q 002356 886 ILLYEMLYGY------------TPFR-----GKTRQKTFANILH--KDLKFPSSTP 922 (931)
Q Consensus 886 vil~ell~G~------------~Pf~-----~~~~~~~~~~I~~--~~~~~p~~~~ 922 (931)
.+||||++.. .||. ..+.+++...+++ +.+.||+.+.
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~ 467 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWR 467 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhh
Confidence 9999999742 3443 2455677777765 4568887654
No 392
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-27 Score=244.34 Aligned_cols=211 Identities=25% Similarity=0.453 Sum_probs=182.6
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeC-----
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (931)
...+|.-++.+|.|.- .|-.+.|.-.++.+|+|.+... ........+..+|..++..+.|+||++++.+|...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 3568999999999998 7888888888999999987665 34455567788999999999999999999998643
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 -~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
..+|+||||| ..+|...+... ++-..+..++.|++.|+.|||+.||+||||||+||++..+..+||.|||+|+.
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVILME----LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence 4689999999 78898888742 77789999999999999999999999999999999999999999999999964
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.... -.....+.|..|.|||++.+.+|...+||||+||++.||++|+..|.|
T Consensus 168 e~~~----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 168 EDTD----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred cCcc----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 3211 123356789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 002356 901 KTRQKTFANILH 912 (931)
Q Consensus 901 ~~~~~~~~~I~~ 912 (931)
.+.-+.+.+|.+
T Consensus 220 ~d~idQ~~ki~~ 231 (369)
T KOG0665|consen 220 KDHIDQWNKIIE 231 (369)
T ss_pred chHHHHHHHHHH
Confidence 999888887765
No 393
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-26 Score=246.23 Aligned_cols=224 Identities=23% Similarity=0.362 Sum_probs=174.9
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc--CCCCccceeEEEEeC----
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTK---- 741 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~---- 741 (931)
..+.++.+.||+|.||.||++.+ .|..||||+|... ......+|.+|.+.. +|+||+.+++.-..+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 45678899999999999999999 5779999998643 335677888887755 999999998765432
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCCcEEEE
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 813 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------gIiHrDIKP~NIll~~~g~vkL~ 813 (931)
..+|||++|.+.|||+++|.++ .++.+....++.-++.||+|||-. .|.|||||..|||+..+|.+-|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 4689999999999999999984 389999999999999999999963 49999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC----CC--ChhhHHHHHHH
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HT--SAVDWWALGIL 887 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~--~~~DiwSlGvi 887 (931)
|+|+|.......... .-..+..+||-+|||||++...- +. ..+||||||.+
T Consensus 359 DLGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLV 415 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLV 415 (513)
T ss_pred eceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHH
Confidence 999996654221110 01234678999999999996532 21 27999999999
Q ss_pred HHHHHc----C------CCCCCC-----CCHHHHHHHHHcC--CCCCCCCCcCCh
Q 002356 888 LYEMLY----G------YTPFRG-----KTRQKTFANILHK--DLKFPSSTPRSK 925 (931)
Q Consensus 888 l~ell~----G------~~Pf~~-----~~~~~~~~~I~~~--~~~~p~~~~~~~ 925 (931)
|||++. | ++||.+ .+.+++.+-+--. .+.+|..+....
T Consensus 416 lWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~ 470 (513)
T KOG2052|consen 416 LWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDP 470 (513)
T ss_pred HHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCH
Confidence 999884 2 678864 4445665555333 456776665543
No 394
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=2e-26 Score=261.65 Aligned_cols=231 Identities=22% Similarity=0.276 Sum_probs=193.8
Q ss_pred CccccccccccCcEEEEEEEEecCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
.....+.||+|+||+||++.+...++ +||+|++.... .......+..|+-+|..|+|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 34556789999999999999865543 68888876542 3445678899999999999999999999988765 88
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
||++|+++|+|.++++... ..+-......|..||++||.|||.++++||||-..|||+..-..+|++|||++.......
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999998754 347888899999999999999999999999999999999999999999999997654222
Q ss_pred CCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCHH
Q 002356 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (931)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~ 904 (931)
.. .......-.+.|||-|.+....|++++|||||||++||++| |..||.+....
T Consensus 853 ~e-------------------------y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KE-------------------------YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred cc-------------------------ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 11 11112223567999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHcC-CCCCCCCCcCChhhhh
Q 002356 905 KTFANILHK-DLKFPSSTPRSKEQIR 929 (931)
Q Consensus 905 ~~~~~I~~~-~~~~p~~~~~~~~~~~ 929 (931)
++-..+.+| .+.-|+.++....+++
T Consensus 908 eI~dlle~geRLsqPpiCtiDVy~~m 933 (1177)
T KOG1025|consen 908 EIPDLLEKGERLSQPPICTIDVYMVM 933 (1177)
T ss_pred HhhHHHhccccCCCCCCccHHHHHHH
Confidence 999888886 4899999888776654
No 395
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=3.6e-25 Score=234.46 Aligned_cols=207 Identities=42% Similarity=0.724 Sum_probs=176.7
Q ss_pred CcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHHH
Q 002356 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (931)
Q Consensus 681 ~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l 760 (931)
+||.||++.+..+++.+|+|++........ ...+.+|+.+++.++|+||+++++++......+++|||+.+++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999998899999999876533221 578889999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 002356 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (931)
Q Consensus 761 ~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (931)
..... ++...+..++.+++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76533 8999999999999999999999999999999999999999999999999985543110
Q ss_pred CCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHcCCCCCCC
Q 002356 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPS 919 (931)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~-~~~~~~~~~I~~~~~~~p~ 919 (931)
......+++.|++||.+....++.++|+||||+++|++++|..||.. .+...+++.+..+....+.
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 208 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 208 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc
Confidence 12244688899999999988889999999999999999999999987 6666666666666555443
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=3e-25 Score=257.35 Aligned_cols=210 Identities=19% Similarity=0.200 Sum_probs=152.9
Q ss_pred cccCCCccccccccccCcEEEEEEEEe----------------cCCeEEEEEEeecccccChH-----------HHHHHH
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 717 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~----------------~~~~~~AvK~~~~~~~~~~~-----------~~~~~~ 717 (931)
....++|.+.++||+|+||.||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 456789999999999999999998652 23568999998643211000 112233
Q ss_pred HHHHHHHhcCCCC-----ccceeEEEEe--------CCeEEEEEeccCCCCHHHHHhhCCC-------------------
Q 002356 718 AEREILDMLDHPF-----VPALYASFQT--------KTHVCLITDYCPGGELFLLLDRQPT------------------- 765 (931)
Q Consensus 718 ~E~~il~~l~hpn-----Iv~l~~~~~~--------~~~~~lVmE~~~ggsL~~~l~~~~~------------------- 765 (931)
.|+.++.++.|.+ ++.++++|.. .+..|+||||+.+++|.+++.....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 4666777776554 3666666642 3568999999999999999864211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCC
Q 002356 766 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 842 (931)
Q Consensus 766 ---~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 842 (931)
..++...++.++.|++.+|.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 124567788999999999999999999999999999999999999999999985432100
Q ss_pred CCccccccccccccccccCCcccchhhhcCCCC----------------------CChhhHHHHHHHHHHHHcCCC-CCC
Q 002356 843 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH----------------------TSAVDWWALGILLYEMLYGYT-PFR 899 (931)
Q Consensus 843 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~----------------------~~~~DiwSlGvil~ell~G~~-Pf~ 899 (931)
........+|+.|+|||.+..... ..+.|+||+||++|+|++|.. ||.
T Consensus 364 ---------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 364 ---------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ---------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 000112235899999999854321 124799999999999999875 775
Q ss_pred C
Q 002356 900 G 900 (931)
Q Consensus 900 ~ 900 (931)
+
T Consensus 435 ~ 435 (507)
T PLN03224 435 N 435 (507)
T ss_pred c
Confidence 4
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=1.6e-25 Score=265.92 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=144.2
Q ss_pred ccCCCccccccccccCcEEEEEEEEecC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEE----
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS---- 737 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~----~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~---- 737 (931)
+..++|.+.+.||+|+||.||++.+..+ +..||+|.+..... ......+ .++...+.+++.++..
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 4567999999999999999999999888 89999998754211 1111111 1222222333222211
Q ss_pred --EEeCCeEEEEEeccCCCCHHHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q 002356 738 --FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (931)
Q Consensus 738 --~~~~~~~~lVmE~~~ggsL~~~l~~~~~~------------------~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI 797 (931)
.......++||||+.+++|.+++...... ......+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 24567899999999999999998754211 1123456789999999999999999999999
Q ss_pred CCCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC--
Q 002356 798 KPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-- 874 (931)
Q Consensus 798 KP~NIll~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-- 874 (931)
||+|||++. ++.+||+|||++....... ......+.||+.|||||.+....
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCC
Confidence 999999985 5799999999996432100 01123567899999999764322
Q ss_pred --------------------CCChhhHHHHHHHHHHHHcCCCCCC
Q 002356 875 --------------------HTSAVDWWALGILLYEMLYGYTPFR 899 (931)
Q Consensus 875 --------------------~~~~~DiwSlGvil~ell~G~~Pf~ 899 (931)
++.++|||||||+||||+++..|+.
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc
Confidence 3345699999999999999776654
No 398
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.2e-26 Score=232.59 Aligned_cols=216 Identities=23% Similarity=0.343 Sum_probs=170.1
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEE-EEeCCeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~~~~~~~ 745 (931)
.+.|++.+.||.|-||.+.+|+++.++..+|+|.+.+. ......|.+|...--.| .|.||+.-|++ |+..++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 46899999999999999999999999999999998764 34567788888765555 58999988775 67888999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec--CCcEEEEeccCCcccCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSC 823 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~--~g~vkL~DFG~a~~~~~ 823 (931)
++|||++-|+|.+-+... .+.+...+.++.|++.||.|||++++||||||.+||||-. ...|||||||.++..+.
T Consensus 99 F~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999998877653 3889999999999999999999999999999999999942 34899999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-----CCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
.- ...--+..|.+||..... ...+.+|+|.||+++|.+++|++||
T Consensus 176 tV------------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 TV------------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred ee------------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 10 112245578999987432 2356899999999999999999999
Q ss_pred CCCC-----HHHHHHHHHcCCCCCCCC
Q 002356 899 RGKT-----RQKTFANILHKDLKFPSS 920 (931)
Q Consensus 899 ~~~~-----~~~~~~~I~~~~~~~p~~ 920 (931)
+... ..+..+-........|..
T Consensus 226 Qka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 226 QKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred hhhhccCchHHHHHHHhcccCccCchh
Confidence 8432 223333333345556654
No 399
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93 E-value=1.5e-25 Score=286.44 Aligned_cols=187 Identities=22% Similarity=0.364 Sum_probs=159.7
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
.|...+.||+|+||.||++.+..++..||+|.+..... ....|++++++++|||||++++++......|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 46777889999999999999988999999998864321 11246888999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
|+++|+|.+++.. ++......++.|++.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~---- 833 (968)
T PLN00113 764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC---- 833 (968)
T ss_pred CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc----
Confidence 9999999999953 788899999999999999999 6699999999999999988877765 55442210
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
......||+.|||||++.+..++.++|||||||++|||++|+.||..
T Consensus 834 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 834 ---------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred ---------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 01123688999999999999999999999999999999999999853
No 400
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.93 E-value=1.4e-25 Score=261.49 Aligned_cols=360 Identities=13% Similarity=0.044 Sum_probs=229.9
Q ss_pred HHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 002356 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (931)
Q Consensus 195 le~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~~~kd 273 (931)
+++++|+++++|. +|+|++||.++++++||+.+|++|+++..+++++........+...+..+. .+..+.....++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5778999999998 777999999999999999999999999888887765666666666666654 455565555677
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCC-CCc
Q 002356 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKP-RSL 352 (931)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ 352 (931)
|..+|+.++..++.+ + .+++++.+|||++++.+.+|......+.. +........+....++...... ..+
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~~e~-----~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQAMER-----DYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777777777776644 2 25688999999988876665311000000 0001112223344444444433 334
Q ss_pred cc-CCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchhcccccCCccccccccccc
Q 002356 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 428 (931)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (931)
+. ......+|..+...+|+..+++.|+++.+++++......... ....+. . .......+.+...|. ...+..
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~--~~~~~~~~~~~~~~~-~~~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-A--APVRILLRRSQKRLL-VVVSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-C--cceEEEEcCCCeEEE-EEEEEE
Confidence 43 345667888899999999999999998876543221100000 000011 0 011111111111111 011111
Q ss_pred cCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHc
Q 002356 429 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 508 (931)
Q Consensus 429 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~ 508 (931)
.. ++...+. ....|+++++..+++++ ..|+.++++++++|+++|.+|. |+++|++|++++
T Consensus 226 ~~-~~~~~~l--------------~~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQ-DGESLFL--------------CQLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred Ee-CCceEEE--------------EEEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 11 1111111 12356777766555443 2599999999999999999988 999999999999
Q ss_pred CCC-hhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 509 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 509 Gys-~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
||+ .++++|+++..+.++.... ....+......+.....+..+.+++|+.+|+.+++.|+.+.++ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999976555533221 1222223333444455677788999999999999999986554 46888999999
Q ss_pred cccccc
Q 002356 588 EHLEPL 593 (931)
Q Consensus 588 erk~~e 593 (931)
+||+++
T Consensus 363 eR~~~~ 368 (442)
T TIGR02040 363 RRLTMR 368 (442)
T ss_pred hhccCC
Confidence 999864
No 401
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=5.7e-26 Score=226.06 Aligned_cols=236 Identities=22% Similarity=0.286 Sum_probs=197.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK 741 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~ 741 (931)
++.+..+.|.+++.||+|+||-+|++....+|..||+|+-..... .-.+..|..+.+.|. ...|+.+..++.+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~ 83 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEK 83 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcccc
Confidence 344678899999999999999999999999999999998765432 234567888988885 46888888888999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CCcEEEEeccCC
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g~vkL~DFG~a 818 (931)
.+..+||+++ |.||.+++.-. .+.++...+..++-|++.-++|+|.+++|||||||+|+|+.- ...+.|+|||+|
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred ccceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccch
Confidence 9999999999 99999999865 356999999999999999999999999999999999999963 346899999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf 898 (931)
+.+-+... -.+-|++......||..|.+-.++.+...+.+.|+-|+|++|.++..|..||
T Consensus 162 Kky~d~~t--------------------~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPW 221 (341)
T KOG1163|consen 162 KKYRDIRT--------------------RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPW 221 (341)
T ss_pred hhhccccc--------------------cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcc
Confidence 76543211 1234566777889999999999999888899999999999999999999999
Q ss_pred CCC---CHHHHHHHHHcCCCCCCCCCcCCh
Q 002356 899 RGK---TRQKTFANILHKDLKFPSSTPRSK 925 (931)
Q Consensus 899 ~~~---~~~~~~~~I~~~~~~~p~~~~~~~ 925 (931)
++. +..+.+++|.+.++..|...-+.+
T Consensus 222 Qglka~tk~QKyEkI~EkK~s~~ie~LC~G 251 (341)
T KOG1163|consen 222 QGLKAATKKQKYEKISEKKMSTPIEVLCKG 251 (341)
T ss_pred cccchhhHHHHHHHHHHhhcCCCHHHHhCC
Confidence 974 556888899998887775544433
No 402
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=6.3e-25 Score=263.36 Aligned_cols=238 Identities=24% Similarity=0.366 Sum_probs=194.9
Q ss_pred ccccCCCccccccccccCcEEEEEEEEec-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCcccee
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (931)
+.+..+...+.+.||+|.||.|+++.... ....||||.++.... ......+..|+++|+.+ .||||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 34555566677799999999999997531 146799999876543 36778899999999999 699999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q 002356 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP------------T--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (931)
Q Consensus 736 ~~~~~~~~~~lVmE~~~ggsL~~~l~~~~------------~--~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~N 801 (931)
+++...+.+++|+||+..|+|..++.... . ..++......++.||+.|++||+++.+|||||...|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999999999999998754 0 138889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccc--CCcccchhhhcCCCCCChh
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPEIIAGAGHTSAV 879 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~aPE~~~~~~~~~~~ 879 (931)
||+..+..+||+|||+|+....... .......| ...|||||.+....|+.++
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~--------------------------y~~~~~~~~LP~kWmApEsl~~~~ft~kS 502 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDY--------------------------YRTKSSAGTLPVKWMAPESLFDRVFTSKS 502 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCc--------------------------eEecCCCCccceeecCHHHhccCcccccc
Confidence 9999999999999999964321110 00011112 3359999999999999999
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCCC-HHHHHHHHHcCC-CCCCCCCcCChhhhh
Q 002356 880 DWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKD-LKFPSSTPRSKEQIR 929 (931)
Q Consensus 880 DiwSlGvil~ell~-G~~Pf~~~~-~~~~~~~I~~~~-~~~p~~~~~~~~~~~ 929 (931)
||||+|++|||+++ |..||.+-. ..++++.+.+|. +..|..++.....||
T Consensus 503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM 555 (609)
T KOG0200|consen 503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLM 555 (609)
T ss_pred hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 99999999999997 999999855 778888888875 699999876655544
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=3.8e-26 Score=255.22 Aligned_cols=220 Identities=27% Similarity=0.431 Sum_probs=189.9
Q ss_pred cCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEE
Q 002356 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (931)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (931)
..++|.++.++|+|+||-||+++++.++...|+|+++.. ......-+.+|+-+++..+|||||.+++.|...+..|+
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 356899999999999999999999999999999999764 33455667889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 002356 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (931)
Q Consensus 747 VmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~ 826 (931)
+||||.||+|.+...- ...+++.++...+++.+++|+|||++|=+|||||-.||++++.|.+|+.|||.+..+..
T Consensus 90 cMEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita--- 164 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--- 164 (829)
T ss_pred EEEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh---
Confidence 9999999999998764 35699999999999999999999999999999999999999999999999999855431
Q ss_pred CCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh---cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~---~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
......++.|||.|||||+. ...+|...+|||++|++-.|+-.-++|-....+
T Consensus 165 ------------------------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp 220 (829)
T KOG0576|consen 165 ------------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP 220 (829)
T ss_pred ------------------------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch
Confidence 12334578999999999987 456788899999999999999888888777777
Q ss_pred HHHHHHHHcCCCCCC
Q 002356 904 QKTFANILHKDLKFP 918 (931)
Q Consensus 904 ~~~~~~I~~~~~~~p 918 (931)
.+.+..+-+-.++-|
T Consensus 221 mr~l~LmTkS~~qpp 235 (829)
T KOG0576|consen 221 MRALFLMTKSGFQPP 235 (829)
T ss_pred HHHHHHhhccCCCCC
Confidence 777766655555444
No 404
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-25 Score=256.31 Aligned_cols=212 Identities=27% Similarity=0.375 Sum_probs=168.6
Q ss_pred CccccccccccCcE-EEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCeEEEE
Q 002356 670 HFRPIKPLGSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 670 ~y~i~~~LG~G~~g-~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV 747 (931)
-|.-.+.+|.|+.| .||++.. .++.||||.+-.. ..+...+|+.+|+.- .|||||++|+.-.+..+.||.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 35555678999998 5799887 6889999987543 345677899999988 699999999988899999999
Q ss_pred EeccCCCCHHHHHhhC-CC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec---CC--cEEEEeccCCcc
Q 002356 748 TDYCPGGELFLLLDRQ-PT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCL 820 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~-~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~---~g--~vkL~DFG~a~~ 820 (931)
.|+| .++|.+++... .. ........+.++.|++.||++||+.+||||||||.||||+. ++ .++|.|||+|+.
T Consensus 582 lELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9999 89999999863 11 11222455788999999999999999999999999999975 34 689999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~ 899 (931)
....... +.......||-+|+|||++....-..++|||||||++|+.++ |.+||.
T Consensus 661 l~~~~sS------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 661 LAGGKSS------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred cCCCcch------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 6432211 122456679999999999998888889999999999999998 499996
Q ss_pred CCCHHHHHHHHHcCCCC
Q 002356 900 GKTRQKTFANILHKDLK 916 (931)
Q Consensus 900 ~~~~~~~~~~I~~~~~~ 916 (931)
.. .+.-.+|+.++..
T Consensus 717 d~--~~R~~NIl~~~~~ 731 (903)
T KOG1027|consen 717 DS--LERQANILTGNYT 731 (903)
T ss_pred ch--HHhhhhhhcCccc
Confidence 43 3334566666653
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.8e-25 Score=238.71 Aligned_cols=222 Identities=24% Similarity=0.347 Sum_probs=170.5
Q ss_pred CCCccccccccccCcEEEEEEEEec---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeCCe
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (931)
.+.|.++++||.|.|+.||++.+.. ..+.||+|.+... ....++.+|+++|..+ .+.||+.+.+++..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 4579999999999999999999977 7889999988654 2346688999999999 69999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTS 822 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~ 822 (931)
+.+||||++.....+++.. ++...++.+++.++.||.++|++|||||||||+|+|.+. .+.-.|+|||+|..+.
T Consensus 110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999999888865 778999999999999999999999999999999999974 5788999999997321
Q ss_pred CCC------C----CCCC-cchh-hhhcccCCCCccccc-----cccccccccccCCcccchhhhcCCC-CCChhhHHHH
Q 002356 823 CKP------Q----LLLP-TTNE-KKRRHKGQQNPVFMA-----EPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWAL 884 (931)
Q Consensus 823 ~~~------~----~~~~-~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSl 884 (931)
... . ...+ .+.. ....-.....|.... .+-.......||++|.|||++...+ .++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 100 0 0000 0000 000000000000000 0011123568999999999997654 5779999999
Q ss_pred HHHHHHHHcCCCCCC
Q 002356 885 GILLYEMLYGYTPFR 899 (931)
Q Consensus 885 Gvil~ell~G~~Pf~ 899 (931)
|+|+..++++..||-
T Consensus 265 GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFF 279 (418)
T ss_pred cceeehhhccccccc
Confidence 999999999999985
No 406
>PRK13560 hypothetical protein; Provisional
Probab=99.92 E-value=2.9e-24 Score=269.48 Aligned_cols=380 Identities=10% Similarity=0.045 Sum_probs=266.4
Q ss_pred ccccccccccchHHHH-HHHHHhcCCcEEEEeCCCCCCceE--EcchHHHHHhCCChhhhcCCC--CCCCCCCCCChHHH
Q 002356 176 DEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPIM--YASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDV 250 (931)
Q Consensus 176 ~~~~~e~~l~~~~~~~-~~ile~~~~~i~v~D~~~~dG~I~--~~N~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~ 250 (931)
.++.++++++++++.+ +.+++++|+++++.+..+ +|.+. +++++...++||...++++.. +..+.+|++.....
T Consensus 54 ~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~~ 132 (807)
T PRK13560 54 ARAIAEAEAQDCREQCERNLKANIPGGMFLFALDG-DGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFFF 132 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEcC-ccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhhh
Confidence 3455778888888888 999999999999998632 44433 488888889999888877643 33566777655443
Q ss_pred -------HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchh
Q 002356 251 -------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPES 323 (931)
Q Consensus 251 -------~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~ 323 (931)
+.+..++..+.....+++.+++||+ |+.....|.++.+|.. .+.|+.+|||++|++|++|+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~------- 202 (807)
T PRK13560 133 ANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA------- 202 (807)
T ss_pred hChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH-------
Confidence 2333344455556678888999996 6777788899888875 6899999999999999998731
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCC--CCcccc
Q 002356 324 LIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYG--GGCRTS 400 (931)
Q Consensus 324 l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~ 400 (931)
.+.+..+..... .....+....+..+|..+...+|+..++++|+...++.+........ ......
T Consensus 203 ------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 270 (807)
T PRK13560 203 ------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFD 270 (807)
T ss_pred ------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhc
Confidence 122223333333 22445566678889999999999999999999999876553221110 000001
Q ss_pred cccccccchhcccccCCcccccccccc--ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHH
Q 002356 401 MQRISEVPEKKKQKSGRRSFMGLIGRK--SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATT 477 (931)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~-~~l~~i 477 (931)
......++.....++|+..|+....+. ..+.++...+. .....|||+|++.++++++. ..|+.+
T Consensus 271 ~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~-------------~~~~~DITerk~~e~~L~~se~~l~~l 337 (807)
T PRK13560 271 ADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGL-------------VGAITDISGRRAAERELLEKEDMLRAI 337 (807)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEE-------------EEEEEechHHHHHHHHHHHHHHHHHHH
Confidence 112223444556788887765544322 22222222211 22468999999999999776 679999
Q ss_pred HhhccceEEEEcCCCCCCCEEec-CHHHHHHcCCChhhhcCCCCCCCCCCCCCHH---------------H--HHHHHHH
Q 002356 478 LERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPA---------------T--VRKIRAA 539 (931)
Q Consensus 478 ~e~~~d~I~v~D~~G~d~~I~~v-N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~---------------~--~~~l~~~ 539 (931)
+++++++|+++|.+|. ++++ |+++++++||+.++++|++...+.+...... . ...+...
T Consensus 338 ~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (807)
T PRK13560 338 IEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKT 414 (807)
T ss_pred HHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHH
Confidence 9999999999999888 9987 6788889999999999998655433221110 0 0112333
Q ss_pred HHcCCcE-EEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccc
Q 002356 540 IDNQTDV-TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (931)
Q Consensus 540 l~~~~~~-~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~ 594 (931)
+..+..+ ..++...+++|..+|+.....|++|.+|.+.+++++++|||++|++|.
T Consensus 415 ~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E~ 470 (807)
T PRK13560 415 IKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVEE 470 (807)
T ss_pred HhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHHH
Confidence 4555543 347788899999999999999999999999999999999999998543
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-24 Score=223.84 Aligned_cols=225 Identities=24% Similarity=0.340 Sum_probs=193.8
Q ss_pred cccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC
Q 002356 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (931)
Q Consensus 663 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (931)
+..+..-.|.+.++||.|.||.++++.+.-++++||||.-... ...-++..|....+.| ..+.|+.+|.+...+
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG 96 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG 96 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeecccc
Confidence 3346677999999999999999999999999999999976432 2344567788888888 679999999988999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-----cEEEEecc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFD 816 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-----~vkL~DFG 816 (931)
.+..||||++ |.||.+++.-.+ +.|+...+..++.||+.-++|+|++.+|.|||||+|+||...+ .+-++|||
T Consensus 97 ~~NiLVidLL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 97 KYNILVIDLL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred chhhhhhhhh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc
Confidence 9999999999 999999998764 5699999999999999999999999999999999999997544 48899999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
+|+.+-++... .+.|++...+..||-+||+-..+.+...+.+.|+-|||-++++++.|.+
T Consensus 175 mAK~YrDp~Tk--------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsL 234 (449)
T KOG1165|consen 175 MAKEYRDPKTK--------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL 234 (449)
T ss_pred chhhhcCcccc--------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCC
Confidence 99876432211 2456788889999999999999999999999999999999999999999
Q ss_pred CCCC---CCHHHHHHHHHcCC
Q 002356 897 PFRG---KTRQKTFANILHKD 914 (931)
Q Consensus 897 Pf~~---~~~~~~~~~I~~~~ 914 (931)
||+| .+..+.+++|=..+
T Consensus 235 PWQGLKA~tnK~kYeKIGe~K 255 (449)
T KOG1165|consen 235 PWQGLKADTNKEKYEKIGETK 255 (449)
T ss_pred ccccccCcchHHHHHHhcccc
Confidence 9987 46678888886544
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=4.5e-23 Score=229.87 Aligned_cols=212 Identities=25% Similarity=0.285 Sum_probs=173.1
Q ss_pred CccccccccccCcEEEEEEEEecCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhcC----CCCccceeEEE-EeCCe
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 743 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~-~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~----hpnIv~l~~~~-~~~~~ 743 (931)
+|.+.+.||+|+||.||+|.+..++ ..+|+|+........ ...+..|..++..+. .+++..+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997764 689999876642211 115677888888885 36999999999 58889
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-----CcEEEEeccCC
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-----g~vkL~DFG~a 818 (931)
.|+||+.+ |.+|.++....+.+.++...+..++.|++.+|++||+.|++||||||+|+++... -.+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999977766789999999999999999999999999999999999999865 36999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccc-ccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P 897 (931)
+......... .. ..+... ...+.||..|.++.++.+...+.+.|+||+++++.+++.|..|
T Consensus 175 r~~~~~~~~~-----~~-------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LP 236 (322)
T KOG1164|consen 175 RRFKYVGDSG-----GN-------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLP 236 (322)
T ss_pred ccccccCCCC-----cc-------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCC
Confidence 7322111000 00 000111 2456799999999999999999999999999999999999999
Q ss_pred CCCCCH
Q 002356 898 FRGKTR 903 (931)
Q Consensus 898 f~~~~~ 903 (931)
|.+...
T Consensus 237 W~~~~~ 242 (322)
T KOG1164|consen 237 WEALEM 242 (322)
T ss_pred Cccccc
Confidence 987553
No 409
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=1.5e-22 Score=208.79 Aligned_cols=185 Identities=39% Similarity=0.655 Sum_probs=159.6
Q ss_pred ccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 002356 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (931)
Q Consensus 677 LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL 756 (931)
||.|++|.||++.+..+++.+++|.+....... ....+.+|+.+++.+.|++|+++++++......+++||++.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 356788999999999999999999999999999999999998999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhh
Q 002356 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 835 (931)
Q Consensus 757 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 835 (931)
.+++.... ..++...++.++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99997642 34899999999999999999999999999999999999998 89999999999854421110
Q ss_pred hhcccCCCCccccccccccccccccCCcccchhhhcCC-CCCChhhHHHHHHHHHHH
Q 002356 836 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 891 (931)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~el 891 (931)
......+...|++||.+... .++.++|+|+||+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 11234578899999999877 778899999999999999
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=9.6e-23 Score=227.02 Aligned_cols=177 Identities=21% Similarity=0.186 Sum_probs=133.0
Q ss_pred ccccCCCccccccccccCcEEEEEEEEec-CCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhcCCCCccc-eeEEEE
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQ 739 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~AvK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~-l~~~~~ 739 (931)
.+...++|.+.+.||+|+||+||+|++.. +++.+|||.+..... ........+.+|+++|+.++|+|++. +++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence 34556789999999999999999999876 678889998753311 12334567899999999999999985 443
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC-CCCcEEEecCCcEEEEeccCC
Q 002356 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 740 ~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI-KP~NIll~~~g~vkL~DFG~a 818 (931)
.+..|+|||||+|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|
T Consensus 90 -~~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 90 -TGKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred -cCCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 2457999999999999732 11 11 1467899999999999999999999 999999998999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~ 872 (931)
+........ .+. ..........|++.|+|||++..
T Consensus 160 ~~~~~~~~~--------~~~-----------~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 160 SVFRRRGAL--------YRI-----------AAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred eecccCcch--------hhh-----------hhhhhhhhhhccCccCCcccCCh
Confidence 765321100 000 00011236678899999998854
No 411
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.88 E-value=2e-22 Score=212.88 Aligned_cols=238 Identities=18% Similarity=0.184 Sum_probs=191.3
Q ss_pred cccCCCccccccccccCcEEEEEEEEecCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE
Q 002356 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 665 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~-----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
++...++++...+-+|.||.||.+.+++.. +.+-+|.++.. ..+-++..+..|..++..+.|||+.++.++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 456678999999999999999999775432 23445544332 13446678889999999999999999998875
Q ss_pred -eCCeEEEEEeccCCCCHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEE
Q 002356 740 -TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (931)
Q Consensus 740 -~~~~~~lVmE~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL 812 (931)
+....+.++.++.-|+|..++.- ...+.++..++..++.|++.|++|||+.||||.||...|.+|++.-.+||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 45677888999989999999972 12345777888899999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHH
Q 002356 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (931)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 892 (931)
+|=.+++..-...-. .....-.....||+||.+....|+.++|+||||++||||+
T Consensus 438 tDsaLSRDLFP~DYh-------------------------cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYH-------------------------CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred ccchhccccCccccc-------------------------ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 999988643211111 1111223456899999999999999999999999999999
Q ss_pred c-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCcCChhhhh
Q 002356 893 Y-GYTPFRGKTRQKTFANILHKD-LKFPSSTPRSKEQIR 929 (931)
Q Consensus 893 ~-G~~Pf~~~~~~~~~~~I~~~~-~~~p~~~~~~~~~~~ 929 (931)
+ |+.||..-++.++..-+++|. +..|-++|-+.-.+|
T Consensus 493 tlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vM 531 (563)
T KOG1024|consen 493 TLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVM 531 (563)
T ss_pred hcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHH
Confidence 7 999999999999999999984 799999986655443
No 412
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.85 E-value=1.9e-20 Score=234.91 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=198.1
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC----
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~---- 261 (931)
..+..+..+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 4456778899999999999998 777999999999999999999999998877777665544445554444433
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHH
Q 002356 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (931)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 341 (931)
.+..+++.+++||+.+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24457888899999999999998873 4455 5678999999987766554331
Q ss_pred HHHHccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccCCcccc
Q 002356 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (931)
Q Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (931)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecC
Q 002356 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (931)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN 501 (931)
+..++++++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 45678899999999999888 99999
Q ss_pred HHHHHHcCCChhhhcCCCCCCCCC-CCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEE
Q 002356 502 DSFLELTEYSREEILGRNCRFLQG-PETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (931)
Q Consensus 502 ~a~~~l~Gys~eEllG~~~~~l~~-~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~v 580 (931)
+++++++||+.++++|++...+.+ +.........+...+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 999999999999999998765544 5555555666677777777778888999999999999999999999999999999
Q ss_pred EEEecCCcccccc
Q 002356 581 GVQLDGSEHLEPL 593 (931)
Q Consensus 581 gi~rDITerk~~e 593 (931)
++.+|||++|+.+
T Consensus 243 ~~~~DITerk~~e 255 (799)
T PRK11359 243 MTFSDITEERQIR 255 (799)
T ss_pred EEeehhhhHHHHH
Confidence 9999999998753
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=7.6e-20 Score=201.20 Aligned_cols=222 Identities=37% Similarity=0.577 Sum_probs=181.9
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCC-CccceeEEEEeCCeEEEEEe
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~lVmE 749 (931)
|.+...||.|+||.||++.+. ..+++|.+.+...........+.+|+.++..+.|+ +++.+++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788899999999999999986 78999999876554444577888999999999888 79999999988888899999
Q ss_pred ccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCCCCCC
Q 002356 750 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~~~~~ 827 (931)
++.+++|.+++..... ..++......++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765431 2589999999999999999999999999999999999999888 7999999998633211100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCC--
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-- 902 (931)
. ..........||..|++||.+.. ..+....|+||+|+++++++.|..||....
T Consensus 159 ~---------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 S---------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred c---------------------cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 0 00013456789999999999987 578889999999999999999999998776
Q ss_pred --HHHHHHHHHcCCCC
Q 002356 903 --RQKTFANILHKDLK 916 (931)
Q Consensus 903 --~~~~~~~I~~~~~~ 916 (931)
.......+......
T Consensus 218 ~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 218 SATSQTLKIILELPTP 233 (384)
T ss_pred ccHHHHHHHHHhcCCc
Confidence 35666666554433
No 414
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.85 E-value=3.1e-21 Score=227.54 Aligned_cols=275 Identities=19% Similarity=0.283 Sum_probs=203.7
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (931)
.+.|+.++++++++++++|. +|+++|+|++|++++||++++++|++...+.++.........++..+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46799999999999999998 777999999999999999999999987766666666667777888888888888888
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc
Q 002356 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (931)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~ 347 (931)
..++++|..+|+..++.|+++.+|.+.+++++++|||++++++++|+.
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~-------------------------------- 127 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVAN-------------------------------- 127 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHH--------------------------------
Confidence 888999999999999999999999999999999999999999887652
Q ss_pred CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccCCcccccccccc
Q 002356 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (931)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (931)
T Consensus 128 -------------------------------------------------------------------------------- 127 (494)
T TIGR02938 128 -------------------------------------------------------------------------------- 127 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHH
Q 002356 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (931)
Q Consensus 428 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l 507 (931)
....++.++++++++|+++|.+|. ++++|++|+++
T Consensus 128 ------------------------------------------~~~~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 128 ------------------------------------------QKLLIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred ------------------------------------------HHHHHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 001178899999999999999888 99999999999
Q ss_pred cCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcE-EEEEEEEecCCc-EEEEEEEEEeeecCCCCE---------
Q 002356 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 576 (931)
Q Consensus 508 ~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~-~~e~~~~~kdG~-~~wv~~~~~pi~d~~G~~--------- 576 (931)
+|+...+..+.....+.+++..... ......+..+ ..+......+|. .+|+.....++.+..|..
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREAL----AENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhhh----hhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 9999888777654434333322221 1111111111 223444445555 789999888887766643
Q ss_pred EEEEEEEecCCccccccccCCchh--hHHHHHHHHHhhhhhhhhhhccCCCC
Q 002356 577 QYFIGVQLDGSEHLEPLRNSIPEA--TAEESEKLVKQTAENVNEAVKELPDA 626 (931)
Q Consensus 577 ~~~vgi~rDITerk~~e~~~~~~~--~~~e~~~~vk~~~~~v~~a~~eL~~~ 626 (931)
.+++++++|||++|++|+..+..+ ...+.....+.+.+.+..+++++..+
T Consensus 239 ~~~~~~~~DITe~k~~ee~l~~~al~~~~~~~~~~~~l~~~~~~~~h~lr~p 290 (494)
T TIGR02938 239 PYLLLTIADISNLREEQERARLSALQALMAEEERLEAIRETLSAAIHRLQGP 290 (494)
T ss_pred chheehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcH
Confidence 345678899999998665433221 12222333344455555555665543
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.7e-22 Score=227.76 Aligned_cols=209 Identities=43% Similarity=0.697 Sum_probs=180.7
Q ss_pred cccccCcEEEEEEEEe---cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEEecc
Q 002356 676 PLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 751 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVmE~~ 751 (931)
.+|.|.||.|++|+-. ..+..||+|++++......... ....|..++..++ ||++++++..|+.+...++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 3799999999988653 4578999999988655544444 6677889999886 999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 002356 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (931)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (931)
.||.|+..+... ..+.+...+.+...++.+++++|+.||+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~-------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK-------- 149 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh--------
Confidence 999999988764 4588999999999999999999999999999999999999999999999999865320
Q ss_pred chhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q 002356 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 911 (931)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~I~ 911 (931)
....+||..|||||++. ++..++|+||||+++|+|++|..||.+ ++...|+
T Consensus 150 -----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 150 -----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred -----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 01128999999999998 677899999999999999999999988 8899999
Q ss_pred cCCCCCCCCCcCC
Q 002356 912 HKDLKFPSSTPRS 924 (931)
Q Consensus 912 ~~~~~~p~~~~~~ 924 (931)
+..+.+|......
T Consensus 201 ~~~~~~p~~l~~~ 213 (612)
T KOG0603|consen 201 KAELEMPRELSAE 213 (612)
T ss_pred hhccCCchhhhHH
Confidence 9898888765443
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=5e-21 Score=198.67 Aligned_cols=142 Identities=17% Similarity=0.185 Sum_probs=117.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhcCCCCccceeEEEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASFQ 739 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~ 739 (931)
+-.++|.+++.||.|+||.||++.+ ++..||+|++............. +.+|+..+.++.||+|+.+.+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 4467999999999999999999755 46689999998765544444444 578999999999999999998866
Q ss_pred eC--------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 740 TK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 740 ~~--------~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
.. +..+|||||++|.+|.++.. +++ ....+++.+|..||..|++|||+||+||+++.+| ++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 33 35799999999999988732 333 2456999999999999999999999999999888 99
Q ss_pred EEeccCCcc
Q 002356 812 LTDFDLSCL 820 (931)
Q Consensus 812 L~DFG~a~~ 820 (931)
|+|||.+..
T Consensus 175 liDfg~~~~ 183 (232)
T PRK10359 175 IIDLSGKRC 183 (232)
T ss_pred EEECCCccc
Confidence 999998743
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.83 E-value=4.2e-21 Score=239.39 Aligned_cols=173 Identities=17% Similarity=0.234 Sum_probs=121.1
Q ss_pred cCC-CCccceeEEEE-------eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q 002356 726 LDH-PFVPALYASFQ-------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (931)
Q Consensus 726 l~h-pnIv~l~~~~~-------~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI 797 (931)
+.| +||+.++++|. ....++++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 445 57778888772 335678889988 77999999753 345999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCC--CCCcchhhhhccc-C---CCCccc-ccccc-ccccccccCCcccchhh
Q 002356 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQL--LLPTTNEKKRRHK-G---QQNPVF-MAEPM-RASNSFVGTEEYIAPEI 869 (931)
Q Consensus 798 KP~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~~~~~~~~~-~---~~~~~~-~~~~~-~~~~~~~Gt~~y~aPE~ 869 (931)
||+||||+..|.+|++|||++......... ...+..-...... . ...... ...++ ......+||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999988888888888877543211100 0000000000000 0 000000 00000 01123579999999999
Q ss_pred hcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 870 IAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 870 ~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
+.+..++.++|||||||+||||++|.+||..
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 9999999999999999999999999999864
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.4e-20 Score=191.27 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=109.8
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHH-----------------------HHHHHHHHHHHHhcCCCC
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 730 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hpn 730 (931)
...||+|+||.||++.+. +|+.||+|+++......... ......|+.+|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999997653211110 112245999999998887
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCccCCCCCCcEEEecCCc
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~gIiHrDIKP~NIll~~~g~ 809 (931)
+.....+... ..+|||||++|++|...+... ..++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544433222 238999999888776553332 3589999999999999999999 699999999999999998 588
Q ss_pred EEEEeccCCcc
Q 002356 810 VSLTDFDLSCL 820 (931)
Q Consensus 810 vkL~DFG~a~~ 820 (931)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999853
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=4.9e-19 Score=179.89 Aligned_cols=203 Identities=19% Similarity=0.168 Sum_probs=142.2
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEEEEE
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~-~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lVm 748 (931)
+.+...|++|+||+||++.. .+.+++.+.+.....-. .-....+.+|+++|++|. |++|++++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34567899999999998876 56778777665432111 111235788999999995 5889999886 4569999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC-CCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI-KP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
||+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||++.........
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999999754321 1 1347789999999999999999999 799999999999999999999644321100
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC-CCC-ChhhHHHHHHHHHHHHcCCCCCCCCC
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 902 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~-~~~DiwSlGvil~ell~G~~Pf~~~~ 902 (931)
. .... .+.. . .-.......++.|++|+...-- ..+ .+.++++.|+.+|.++|+..|+.+.+
T Consensus 149 ~--r~L~-~rDl---------~--~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 M--RLLA-REDL---------R--HLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred H--HHHH-HHHH---------H--HHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0000 0000 0 0001122378889999865322 233 57899999999999999999887543
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.3e-19 Score=182.42 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=111.5
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChH-----------------------HHHHHHHHHHHHHhcCCCC
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------------------KVHRACAEREILDMLDHPF 730 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~hpn 730 (931)
...||+|+||.||++.+. +|+.||||++......... .......|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567999999999999987 8999999999875321000 0122357899999999998
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCc
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g~ 809 (931)
+.....+.... .||||||++|+++....... ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++.
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 86554443332 48999999887654432222 347888999999999999999999 9999999999999999 899
Q ss_pred EEEEeccCCccc
Q 002356 810 VSLTDFDLSCLT 821 (931)
Q Consensus 810 vkL~DFG~a~~~ 821 (931)
++|+|||++...
T Consensus 156 ~~liDFG~a~~~ 167 (190)
T cd05145 156 PYIIDVSQAVEL 167 (190)
T ss_pred EEEEEcccceec
Confidence 999999999654
No 421
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.78 E-value=2.2e-19 Score=211.30 Aligned_cols=200 Identities=39% Similarity=0.635 Sum_probs=149.2
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
-.+|..++.+..|+||.||+++++.+.+.+|+| +++..+. .+ .||...+.|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li--------lR--nilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI--------LR--NILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh--------hh--ccccccCCccee---------------
Confidence 358999999999999999999999999999995 4443211 00 044444556555
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 002356 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (931)
Q Consensus 748 mE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~ 827 (931)
|+-...++.- +.++.. ++.+++|||+-||+|||+||+|.+|+.=|++|++|||++....-....
T Consensus 136 ------gDc~tllk~~--g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ------GDCATLLKNI--GPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ------chhhhhcccC--CCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4444444432 224433 278999999999999999999999999999999999998653211110
Q ss_pred CCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q 002356 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (931)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 907 (931)
....+.-.+ +.. .-.....+|||.|.|||++...+|+..+|+|++|+|+|+++.|+.||.++++++++
T Consensus 200 nl~eg~I~k----------~t~--Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 200 NLKEGHIEK----------DTH--EFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred hhhhcchHH----------HHH--HhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 000000000 000 01233568999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCC
Q 002356 908 ANILHKDLKFPSST 921 (931)
Q Consensus 908 ~~I~~~~~~~p~~~ 921 (931)
.+++...+.||+..
T Consensus 268 g~visd~i~wpE~d 281 (1205)
T KOG0606|consen 268 GQVISDDIEWPEED 281 (1205)
T ss_pred hhhhhhhccccccC
Confidence 99999999998764
No 422
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=7.5e-20 Score=216.90 Aligned_cols=206 Identities=27% Similarity=0.432 Sum_probs=164.3
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeec---ccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~---~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.....+|.|++|.|+.+........++.|.+.. ...........+..|..+-..|.|||++..+..+......+..|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 455679999999898888877666677775542 11112222233667778888889999988877776666566669
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
|||++ +|+.++... ..++...+..+++|++.||.|||..||.|||+||+|+++..+|.+||+|||.+..+.....
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e-- 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE-- 475 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc--
Confidence 99988 999999875 3488999999999999999999999999999999999999999999999999866532211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCC-hhhHHHHHHHHHHHHcCCCCCCCCCH
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTR 903 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~-~~DiwSlGvil~ell~G~~Pf~~~~~ 903 (931)
........++|+-.|+|||++....|++ ..||||.|++++.|++|+.||.....
T Consensus 476 ---------------------~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~ 530 (601)
T KOG0590|consen 476 ---------------------KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK 530 (601)
T ss_pred ---------------------hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccc
Confidence 0123345678999999999999999987 79999999999999999999986443
No 423
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.77 E-value=2.2e-18 Score=174.52 Aligned_cols=119 Identities=26% Similarity=0.342 Sum_probs=99.6
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 002356 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (931)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (931)
|+|.+++..+ ...+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999764 245999999999999999999999998 999999999999999 998854321
Q ss_pred hhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHc
Q 002356 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILH 912 (931)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~~~~~~I~~ 912 (931)
....||+.|||||++.+..++.++|||||||++|+|++|+.||..... ...+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 112589999999999999999999999999999999999999976543 344555554
Q ss_pred C
Q 002356 913 K 913 (931)
Q Consensus 913 ~ 913 (931)
+
T Consensus 120 ~ 120 (176)
T smart00750 120 G 120 (176)
T ss_pred H
Confidence 3
No 424
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.76 E-value=2.5e-19 Score=210.60 Aligned_cols=204 Identities=23% Similarity=0.253 Sum_probs=158.3
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeeccc-ccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
.|...+.||++.|=+|.++++.+ | .+++|++-+.. ........+...|++ ...+++||++.+.-+.......|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 78899999999999999999843 4 48999986643 333344455555666 55669999998887777788889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 828 (931)
+|+ .-+|++.+..++. +...+.+.|+.||+.||..+|..||+|||||.+||||++-+.+.|+||...+...-+
T Consensus 101 qyv-khnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP---- 173 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP---- 173 (1431)
T ss_pred HHH-hhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC----
Confidence 999 7799999988654 889999999999999999999999999999999999999999999999987433211
Q ss_pred CCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-----------CCChhhHHHHHHHHHHHHc-CCC
Q 002356 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY-GYT 896 (931)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-----------~~~~~DiwSlGvil~ell~-G~~ 896 (931)
..+|..+..-++ +..--.+|+|||.+.... .+++.||||+||++.||++ |.+
T Consensus 174 -------------eDNPadf~fFFD---TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 174 -------------EDNPADFTFFFD---TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred -------------CCCcccceEEEe---cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 111111111111 222334799999986532 4678999999999999997 899
Q ss_pred CCC
Q 002356 897 PFR 899 (931)
Q Consensus 897 Pf~ 899 (931)
||.
T Consensus 238 lF~ 240 (1431)
T KOG1240|consen 238 LFT 240 (1431)
T ss_pred ccc
Confidence 993
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=8e-18 Score=174.28 Aligned_cols=136 Identities=22% Similarity=0.224 Sum_probs=107.1
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-----CCCCccceeEEEEeCC---e
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---H 743 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~---~ 743 (931)
.-...||+|+||.||. ++.+... +||++.... ....+.+.+|+.+++.+ +||||+++++++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 3456799999999995 7666665 699886532 22446789999999999 5799999999998863 4
Q ss_pred EE-EEEec--cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCccCCCCCCcEEEec----CCcEEEEec
Q 002356 744 VC-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTDF 815 (931)
Q Consensus 744 ~~-lVmE~--~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL-~~LH~~gIiHrDIKP~NIll~~----~g~vkL~DF 815 (931)
++ +|||| +.+++|.+++... .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 44 78999 4479999999653 26655 35678888777 9999999999999999999974 337999995
Q ss_pred cCC
Q 002356 816 DLS 818 (931)
Q Consensus 816 G~a 818 (931)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 544
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=3.7e-18 Score=205.77 Aligned_cols=199 Identities=24% Similarity=0.344 Sum_probs=158.0
Q ss_pred ccccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC---CCCccceeEEEEe
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQT 740 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~ 740 (931)
-.+....|.|.+.||.|+||+||+|.+.. ++.+|+|+-+....=+-... .+++.+|+ -+.|+.+...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~------~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC------LQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh------HHHHHhhchhhhcchHHHHHHHcc
Confidence 34667899999999999999999999866 99999998766432111111 22333333 2455566666667
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-------cCCcEEEE
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-------GNGHVSLT 813 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~-------~~g~vkL~ 813 (931)
.+.-+||+||.+.|+|.+++.. .+.+++..+..+..||+..|++||..+|||+||||+|+||. ..-.++|+
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred CCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEE
Confidence 7778999999999999999985 45699999999999999999999999999999999999995 22359999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc
Q 002356 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 893 (931)
|||.+.-+.- ..........++|-.|-++|...+..+++.+|.|.|+.+++-|+.
T Consensus 844 DfG~siDm~l-------------------------fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLF 898 (974)
T KOG1166|consen 844 DFGRSIDMKL-------------------------FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLF 898 (974)
T ss_pred ecccceeeeE-------------------------cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHH
Confidence 9999854321 111223456788999999999999999999999999999999999
Q ss_pred CCC
Q 002356 894 GYT 896 (931)
Q Consensus 894 G~~ 896 (931)
|+.
T Consensus 899 G~y 901 (974)
T KOG1166|consen 899 GKY 901 (974)
T ss_pred HHH
Confidence 854
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=2.9e-17 Score=174.23 Aligned_cols=144 Identities=20% Similarity=0.156 Sum_probs=113.3
Q ss_pred CccccccccccCcEEEEEEE-EecCCeEEEEEEeecccccCh-------------------H--HHHHHHHHHHHHHhcC
Q 002356 670 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLNR-------------------N--KVHRACAEREILDMLD 727 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~-~~~~~~~~AvK~~~~~~~~~~-------------------~--~~~~~~~E~~il~~l~ 727 (931)
.|.+.+.||.|+||.||++. +..+++.||+|++........ . ....+..|+.+++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999998 667899999999875432100 0 1123568999999997
Q ss_pred CC--CccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCcEEE
Q 002356 728 HP--FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 804 (931)
Q Consensus 728 hp--nIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g-IiHrDIKP~NIll 804 (931)
+. .+++++++ ...++||||+.|.+|....... ..+....+..++.||+.+|.+||++| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34455543 2348999999988887654332 23666678899999999999999999 9999999999999
Q ss_pred ecCCcEEEEeccCCcc
Q 002356 805 QGNGHVSLTDFDLSCL 820 (931)
Q Consensus 805 ~~~g~vkL~DFG~a~~ 820 (931)
+ ++.++|+|||.+..
T Consensus 183 ~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 183 H-DGKVVIIDVSQSVE 197 (237)
T ss_pred E-CCCEEEEEChhhhc
Confidence 9 88999999999854
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=1.2e-16 Score=167.14 Aligned_cols=138 Identities=21% Similarity=0.236 Sum_probs=115.0
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEE
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVm 748 (931)
++.||+|++|.||++.+ ++..+++|.......... .....+.+|+.++..+.|++|+....++......+++|
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 35789999999999987 677899998654322211 12345778999999999999887777777778889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
||++|++|.+++.... . ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999986531 1 7788999999999999999999999999999999 88999999999854
No 429
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=1.8e-17 Score=177.26 Aligned_cols=200 Identities=24% Similarity=0.284 Sum_probs=132.4
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC----------CCCccceeEEEE
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 739 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~----------hpnIv~l~~~~~ 739 (931)
.+.....||.|+++.||.|.+..|++.+|+|++...........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4566788999999999999999999999999987655444456677776665444432 223444444432
Q ss_pred ---------eC---C-----eEEEEEeccCCCCHHHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q 002356 740 ---------TK---T-----HVCLITDYCPGGELFLLLDR---QPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (931)
Q Consensus 740 ---------~~---~-----~~~lVmE~~~ggsL~~~l~~---~~~~--~l~~~~~~~i~~qil~aL~~LH~~gIiHrDI 797 (931)
.. + +.+++|+-+ .++|.+++.. .... .+....-..+..|++..+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 246788887 7888887652 1111 1222223344589999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCC----
Q 002356 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---- 873 (931)
Q Consensus 798 KP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---- 873 (931)
||+|++++.+|.++|+||+.....+.... ....+..|.+||.....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~------------------------------~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR------------------------------CSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEE------------------------------GGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceee------------------------------ccCCCcccCChhhhhhhcccC
Confidence 99999999999999999997754331100 01244789999987442
Q ss_pred ----CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 874 ----GHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 874 ----~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
.++.+.|.|+||+++|.|.+|..||..
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 467799999999999999999999974
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=4.6e-16 Score=161.05 Aligned_cols=133 Identities=18% Similarity=0.197 Sum_probs=108.0
Q ss_pred cccccCcEEEEEEEEecCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEec
Q 002356 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 676 ~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~ 750 (931)
.||+|+||.||++.. ++..+++|......... .....++.+|+++++.+.|+++....-++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999985 66789999865432211 12236677899999999888766555555666778999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999876421 1 7889999999999999999999999999999 89999999999854
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=8.2e-16 Score=159.18 Aligned_cols=140 Identities=21% Similarity=0.152 Sum_probs=109.3
Q ss_pred CccccccccccCcEEEEEEEEecCCeEEEEEEeecccccCh-------------------HHHHHHHHHHHHHHhcCCC-
Q 002356 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 729 (931)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp- 729 (931)
.|.+.+.||.|+||.||++... +++.+|+|++........ ........|..++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888999999999999999874 799999998765321000 0112356788899988777
Q ss_pred -CccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q 002356 730 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 730 -nIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g 808 (931)
.++.+++ ....++||||++|++|..+... .....++.+|+.++.++|+.||+|+||||+||+++.++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 4455443 2455899999999998765421 34567889999999999999999999999999999999
Q ss_pred cEEEEeccCCcccC
Q 002356 809 HVSLTDFDLSCLTS 822 (931)
Q Consensus 809 ~vkL~DFG~a~~~~ 822 (931)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999985443
No 432
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.64 E-value=3.5e-15 Score=136.24 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.0
Q ss_pred CCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 002356 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (931)
Q Consensus 199 ~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w 278 (931)
|+|++++|. +|+|+++|++|++++||++++++|+++..+.++.........+.+++..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999998 78899999999999999999999999998888888888889999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEecchh
Q 002356 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (931)
Q Consensus 279 ~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (931)
+.++++|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.2e-15 Score=179.49 Aligned_cols=140 Identities=21% Similarity=0.227 Sum_probs=112.4
Q ss_pred CCccccccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCe
Q 002356 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (931)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (931)
..|...+.||+|+||.||++.+... .+++|........ ......++.+|+++++.++|++++....++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3557788999999999999987443 3444433221111 11234567899999999999999888777777777
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCccc
Q 002356 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 744 ~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~ 821 (931)
.++||||++|++|.+++. ....++.+++.+|.|||+.||+||||||+|||+ .++.++|+|||+++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 899999999999999885 246789999999999999999999999999999 5789999999999653
No 434
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.61 E-value=5.8e-16 Score=157.06 Aligned_cols=220 Identities=18% Similarity=0.301 Sum_probs=175.0
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
+......++.+|.....|..|++++.+ .-++.|+++-... .......|..|.-.|+-+.||||+.+++.+....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 556677888899999999999999954 4567787764332 2333456777888899999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcEEE--EeccCCccc
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL--TDFDLSCLT 821 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--IiHrDIKP~NIll~~~g~vkL--~DFG~a~~~ 821 (931)
++..||+-|||+.+++.+..-..+..++..++..|+.|++|||+.. |.---|....++|+.+.+.+| +|--++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999999887767788899999999999999999974 344468888999998877665 344333110
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCC---hhhHHHHHHHHHHHHcCCCCC
Q 002356 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTPF 898 (931)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~ell~G~~Pf 898 (931)
....-.|.||+||.+...+-+. ++|+|||+++||||.|...||
T Consensus 344 ----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 344 ----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred ----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 1123578999999998776543 899999999999999999999
Q ss_pred CCCCHHHHHHHHH-cC-CCCCCCCCc
Q 002356 899 RGKTRQKTFANIL-HK-DLKFPSSTP 922 (931)
Q Consensus 899 ~~~~~~~~~~~I~-~~-~~~~p~~~~ 922 (931)
...++.+.-.+|. +| ...+|+...
T Consensus 390 adlspmecgmkialeglrv~ippgis 415 (448)
T KOG0195|consen 390 ADLSPMECGMKIALEGLRVHIPPGIS 415 (448)
T ss_pred ccCCchhhhhhhhhccccccCCCCcc
Confidence 9999999888885 44 346776543
No 435
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.61 E-value=6.6e-15 Score=134.40 Aligned_cols=104 Identities=28% Similarity=0.460 Sum_probs=96.6
Q ss_pred cceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 002356 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (931)
Q Consensus 482 ~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~w 561 (931)
|+||+++|.+|. |+++|++|++++||++++++|+++..+.+++......+.+.+.+..+..+..+..+.+++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999888 99999999999999999999999999998888888889999999988889999999999999999
Q ss_pred EEEEEEeeecCCCCEEEEEEEEecCCc
Q 002356 562 NLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (931)
Q Consensus 562 v~~~~~pi~d~~G~~~~~vgi~rDITe 588 (931)
+.+++.|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 436
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.60 E-value=1.4e-15 Score=197.66 Aligned_cols=299 Identities=11% Similarity=0.014 Sum_probs=212.6
Q ss_pred eeecccCCCCCcceeEeccCCCCCCCCCCCccCCCCCcceEEEecccccccccccccchHHHHHHHHHhcCCcEEEEeCC
Q 002356 129 LVLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDAT 208 (931)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~ 208 (931)
..++..+..|...|+........+.+|.+. +.++.+.|||++|++|+++++.++.++.+++..+++++.+|.
T Consensus 357 ~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~-------~~i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~- 428 (1092)
T PRK09776 357 MEKRYYRRDGEVVWALLAVSLVRDTDGTPL-------YFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL- 428 (1092)
T ss_pred eeeEEEcCCCCEEEEEEEEEEEECCCCCEe-------eehhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec-
Confidence 344555666777777665554444444332 244556899999999999999999999999999999999998
Q ss_pred CCCCceEEcchHHHHHhCCChhhhcCCC-CCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeee
Q 002356 209 KPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIK 287 (931)
Q Consensus 209 ~~dG~I~~~N~a~~~l~Gys~eEllG~~-~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~ 287 (931)
+|.++++|+++++++||+.++..+.. +..+.+|++.......+...+..+..+..+++.+++|| .+|+.....+++
T Consensus 429 --~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~ 505 (1092)
T PRK09776 429 --KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVL 505 (1092)
T ss_pred --CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEE
Confidence 67799999999999999998854432 22456677767777788888888999999999999999 999999999999
Q ss_pred cCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcccccCC
Q 002356 288 DDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSE 366 (931)
Q Consensus 288 d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 366 (931)
|.+|.+.+++++.+|||++|+++++|+.. .+....+..... .....+.......+|...+
T Consensus 506 d~~G~~~~~ig~~~DITerk~~e~~L~~~-------------------~~~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~ 566 (1092)
T PRK09776 506 NKDGEVERLLGINMDMTEVRQLNEALFQE-------------------KERLHITLDSIGEAVVCTDMAMKVTFMNPVAE 566 (1092)
T ss_pred CCCCCEEEEEeeeeehhHHHHHHHHHHHH-------------------HHHHHHHHhccccEEEEECCCCeEEEEcHHHH
Confidence 99999999999999999999999988731 111222222222 2344555567777888899
Q ss_pred CCchhhhcccccCCCCCCCCCC--CCCCCCCC---ccccc-ccccccchhcccccCCccccccccccccCCCCCCCcccc
Q 002356 367 GGVEEERAGALGRRKSENVPPP--RRNSYGGG---CRTSM-QRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENE 440 (931)
Q Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (931)
...|+..++++|+...+..... ........ +.... ............++|...|+.....+..+.++...+..-
T Consensus 567 ~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~ 646 (1092)
T PRK09776 567 KMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSVL 646 (1092)
T ss_pred HHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEE
Confidence 9999999999999877653321 11000000 00000 011122223457788888887777666665554433222
Q ss_pred ccccCCCCCCCCCCCCCchhhHHHHHhhhh
Q 002356 441 IIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (931)
Q Consensus 441 i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~ 470 (931)
..+|||+|++.+++++.
T Consensus 647 -------------~~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 647 -------------VIQDVTESRKMLRQLSY 663 (1092)
T ss_pred -------------EEEecchHHHHHHHHHh
Confidence 35789999999988754
No 437
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.5e-15 Score=151.32 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=99.7
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHH---------------------HHHHHHHHHhcCCC--C
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR---------------------ACAEREILDMLDHP--F 730 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~---------------------~~~E~~il~~l~hp--n 730 (931)
.+.||+|+||.||++.+. +++.||||++............. ...|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999986 78999999987643211111111 13466666666443 3
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q 002356 731 VPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 808 (931)
Q Consensus 731 Iv~l~~~~~~~~~~~lVmE~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~gIiHrDIKP~NIll~~~g 808 (931)
+++++.+ ...++||||++|+.+.. .+.... . ...++.++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 4555543 23589999998854321 121110 1 16778899999999999999 9999999999999999 89
Q ss_pred cEEEEeccCCccc
Q 002356 809 HVSLTDFDLSCLT 821 (931)
Q Consensus 809 ~vkL~DFG~a~~~ 821 (931)
.++|+|||.+...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999998543
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2.9e-14 Score=151.64 Aligned_cols=136 Identities=24% Similarity=0.331 Sum_probs=104.0
Q ss_pred ccc-ccCcEEEEEEEEecCCeEEEEEEeecccc-----c-----ChHHHHHHHHHHHHHHhcCCCCc--cceeEEEEeC-
Q 002356 676 PLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM-----L-----NRNKVHRACAEREILDMLDHPFV--PALYASFQTK- 741 (931)
Q Consensus 676 ~LG-~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~-----~-----~~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~~- 741 (931)
.|| .|+.|+||.+.. .+..++||.+..... . ......++.+|+.++..|.|++| +..+++....
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 466 788888888877 467899998864321 0 11234567889999999988775 6677664432
Q ss_pred Ce---EEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccC
Q 002356 742 TH---VCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (931)
Q Consensus 742 ~~---~~lVmE~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~ 817 (931)
.. .++|||+++| .+|.+++... .+++.. +.+|+.+|.+||++||+|+||||.|||++.++.++|+|||.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 22 2599999987 6999888642 355543 57899999999999999999999999999889999999999
Q ss_pred Ccc
Q 002356 818 SCL 820 (931)
Q Consensus 818 a~~ 820 (931)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 854
No 439
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=9.3e-15 Score=155.72 Aligned_cols=179 Identities=23% Similarity=0.300 Sum_probs=127.8
Q ss_pred CCCCccceeEEEEe---------------------------CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHH
Q 002356 727 DHPFVPALYASFQT---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 779 (931)
Q Consensus 727 ~hpnIv~l~~~~~~---------------------------~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~q 779 (931)
.|||||.++..|.+ ...+|+||.-+ ..+|..++..+ ..+....+.++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC---CCchHHHHHHHHH
Confidence 58899888776632 24589999988 78999999875 3677888899999
Q ss_pred HHHHHHHHHHCCCccCCCCCCcEEEe--cCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccc
Q 002356 780 VVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 855 (931)
Q Consensus 780 il~aL~~LH~~gIiHrDIKP~NIll~--~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (931)
+++|+.|||++||.|||+|.+|||+. +|+ .+.|+|||.|-. +......-+. ....
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA--d~~hGlqlpy-------------------~S~~ 408 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA--DDNHGLQLPY-------------------ESDE 408 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee--cccccccccc-------------------cccc
Confidence 99999999999999999999999994 333 688999998732 1111111000 0011
Q ss_pred cccccCCcccchhhhcCCCC------CChhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCCCCCCCCCcCChhh
Q 002356 856 NSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFANILHKDLKFPSSTPRSKEQ 927 (931)
Q Consensus 856 ~~~~Gt~~y~aPE~~~~~~~------~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~~~~I~~~~~~~p~~~~~~~~~ 927 (931)
-..-|.-.-||||+....+- ..++|.|+.|.+-||+++..-||.+... .+...--...-...|+.+|.-..|
T Consensus 409 Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rq 488 (598)
T KOG4158|consen 409 VDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQ 488 (598)
T ss_pred ccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHH
Confidence 12346777899999865432 2389999999999999999999986322 111111123345788888888777
Q ss_pred hhc
Q 002356 928 IRF 930 (931)
Q Consensus 928 ~~~ 930 (931)
+-|
T Consensus 489 lV~ 491 (598)
T KOG4158|consen 489 LVF 491 (598)
T ss_pred HHH
Confidence 765
No 440
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.55 E-value=2.1e-15 Score=167.79 Aligned_cols=128 Identities=27% Similarity=0.416 Sum_probs=108.3
Q ss_pred CeEEEEEeccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 742 THVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
.++||.|++|...+|.+++.++ .....+......++.|++.+++| +|.+|+|+||.||++..+..+||+|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 4689999999999999999743 33457778899999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHc
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 893 (931)
+.... ............+||..||+||.+.+..|+.++||||||++|+|+++
T Consensus 406 ~~~~~---------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 406 QDKDE---------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cccCC---------------------cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 43221 11222334456789999999999999999999999999999999987
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=5.9e-14 Score=137.20 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=111.6
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC--CCccceeEEEEeCCeEEEEEec
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 750 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lVmE~ 750 (931)
+++.||.|.++.||++.... ..+++|.+..... ...+..|+.+++.+.+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 46789999999999999843 7899998865421 4567889999999976 5899999888888899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
+.|+.+..+ +......++.+++.+|.+||.. +++|+|++|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988877543 4456677889999999999985 799999999999999889999999999854
No 442
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.51 E-value=1.5e-13 Score=126.82 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.3
Q ss_pred HHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 002356 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (931)
Q Consensus 195 le~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 274 (931)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999998 8889999999999999999999999998888887778888899999999888776666544 99
Q ss_pred cEEEEEEEeeeeecCCCCEEEEEEEEecchhhhH
Q 002356 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (931)
Q Consensus 275 ~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (931)
..+|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 443
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.50 E-value=1.9e-13 Score=126.80 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=95.7
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE-EE
Q 002356 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 267 (931)
Q Consensus 189 ~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~ 267 (931)
+.|++++++++++++++|. +|+|+|+|++|++++||+.++++|+++..+.++++.......+.+.+..+..... +.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999997 8889999999999999999999999998787776655677888888877776544 33
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 002356 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (931)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DI 303 (931)
....++|+.+|+.+..+|+++.+|++.+++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 334469999999999999999999999999999997
No 444
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.48 E-value=1.5e-13 Score=126.81 Aligned_cols=110 Identities=25% Similarity=0.335 Sum_probs=99.6
Q ss_pred HhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 002356 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (931)
Q Consensus 478 ~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG 557 (931)
|++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999888 9999999999999999999999988888888888888889999888887776666655 99
Q ss_pred cEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 558 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 558 ~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
..+|+.+++.|++|.+|++.+++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.47 E-value=1.2e-14 Score=171.96 Aligned_cols=253 Identities=31% Similarity=0.471 Sum_probs=193.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (931)
...+.+.+.+.+-+|.++.++.+.-..++..++.|+..+..+...........+-.++-...+|.++.....+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34667888899999999999999888888777888766554433333444444544544445677776666667788899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~ 825 (931)
++|+|++|++|...++..+ +.+.+-.+.+...+..+++|||...+.|+|++|.|+++..+|..++.|||.....+..+
T Consensus 881 L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 9999999999999998754 47888889999999999999999999999999999999999999999999554433221
Q ss_pred CCCCC--c---chhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 002356 826 QLLLP--T---TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (931)
Q Consensus 826 ~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 900 (931)
..... . +... +.......+....+........+||+.|.+||.+.+..+.+.+|+|++|+++++.++|.+||..
T Consensus 959 p~~~~sg~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPR-RLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred CcCCcccccccCccc-cccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 11100 0 0000 1111111222222333456678999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCC
Q 002356 901 KTRQKTFANILHKDLKFPSST 921 (931)
Q Consensus 901 ~~~~~~~~~I~~~~~~~p~~~ 921 (931)
..+.+++++|+++...+|.-.
T Consensus 1038 ~tpq~~f~ni~~~~~~~p~g~ 1058 (1205)
T KOG0606|consen 1038 ETPQQIFENILNRDIPWPEGP 1058 (1205)
T ss_pred cchhhhhhccccCCCCCCCCc
Confidence 999999999999999888753
No 446
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.46 E-value=4e-13 Score=124.61 Aligned_cols=111 Identities=22% Similarity=0.328 Sum_probs=95.9
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEE-EEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV-QLI 551 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~-e~~ 551 (931)
+|++++++++++++++|.+|. |+++|++|+++|||+.++++|++...++++++.......+...+..+..... +..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 489999999999999999888 9999999999999999999999999888887766677778888777766444 444
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecC
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDI 586 (931)
...++|+.+|+.+...|+++.+|++.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 44469999999999999999999999999999997
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=1.5e-14 Score=171.98 Aligned_cols=211 Identities=25% Similarity=0.376 Sum_probs=168.7
Q ss_pred CCCccccccccccCcEEEEEEEEec-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhcC-CCCccceeEEEEeCCeEE
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (931)
...|.+.+.||.|+|+.|-++.... +...+|+|.+.... ........+..|..+-+.+. |+|++.+++........+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 3468889999999999998887743 34567777765442 23344455566788877776 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCCCcEEEecCC-cEEEEeccCCcccCC
Q 002356 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSC 823 (931)
Q Consensus 746 lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~gIiHrDIKP~NIll~~~g-~vkL~DFG~a~~~~~ 823 (931)
++++|..|++++..+........+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999999883222224777888999999999999999 99999999999999999999 999999999966532
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccc-CCcccchhhhcCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 002356 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (931)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~ 901 (931)
. ..........+| ++.|+|||.+.+. ...+..|+||+|+++.-+++|..||...
T Consensus 178 ~------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 178 K------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred c------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 1 011123334567 9999999999884 4567899999999999999999999754
Q ss_pred CH
Q 002356 902 TR 903 (931)
Q Consensus 902 ~~ 903 (931)
..
T Consensus 234 ~~ 235 (601)
T KOG0590|consen 234 SR 235 (601)
T ss_pred cc
Confidence 33
No 448
>PRK13559 hypothetical protein; Provisional
Probab=99.41 E-value=5.2e-12 Score=143.43 Aligned_cols=129 Identities=40% Similarity=0.748 Sum_probs=114.7
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 002356 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (931)
Q Consensus 186 ~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 265 (931)
.+.+.|+.+++.++++++++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 34567899999999999999987678889999999999999999999999988777766666667778888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
+...+++||..+|+.+++.|+++.+|.+.+++++++|||++|+++++++
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~ 168 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEA 168 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHH
Confidence 8888999999999999999999999999999999999999998876544
No 449
>PRK13557 histidine kinase; Provisional
Probab=99.41 E-value=2.3e-12 Score=154.13 Aligned_cols=132 Identities=37% Similarity=0.739 Sum_probs=120.5
Q ss_pred cccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCc
Q 002356 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (931)
Q Consensus 183 ~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~ 262 (931)
.....+..|+.++++++++|+++|..+.||+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (540)
T PRK13557 24 VSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERRE 103 (540)
T ss_pred hhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCC
Confidence 34456789999999999999999987778999999999999999999999999998888887777778888888988888
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
+..+++.++++|+.+|+.+++.|+++.+|.+++++++.+|||+++++++++.
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 104 IATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred ceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 8888888899999999999999999999999999999999999999988765
No 450
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.40 E-value=1.4e-12 Score=163.22 Aligned_cols=141 Identities=13% Similarity=0.121 Sum_probs=128.5
Q ss_pred ecccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHH
Q 002356 172 GEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVA 251 (931)
Q Consensus 172 ~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~ 251 (931)
.+|++++++++++++.++.++.++++++++++++|. +|+|+++|++|++++||+.++++|+++..+++++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 688999999999999999999999999999999998 77899999999999999999999999887777766666666
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 252 ~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
.....+..+..+..+....+++|..+|+.++..|+++.+|.+.|++++++|||++|+++++++.
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~ 278 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEK 278 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHH
Confidence 6777788888888888889999999999999999999999999999999999999999988763
No 451
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.37 E-value=8.1e-13 Score=154.29 Aligned_cols=256 Identities=9% Similarity=0.009 Sum_probs=169.0
Q ss_pred cceEEEecccccccc-----------cc---cccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhh
Q 002356 166 NSVRSSGEMSDEGGK-----------EK---GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKE 231 (931)
Q Consensus 166 ~~~~~~~dit~~~~~-----------e~---~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eE 231 (931)
+.+.+..|||+.++. |+ +|+++++.|+.++++++++++++|.. +|+|+++|++|++++||+.+|
T Consensus 96 ~~~~i~rDi~~~~~~~~~l~~~~~~~e~~~~~l~~~e~r~~~l~e~~~~~i~~~d~~--~g~i~~~N~a~~~l~G~~~~e 173 (442)
T TIGR02040 96 GVLALGRDLRAVAELQQQLVAAQQAMERDYWTLREMETRYRVVLEVSSDAVLLVDMS--TGRIVEANSAAAALLGGVGQS 173 (442)
T ss_pred eEEEEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEECC--CCEEEEEcHHHHHHhCcCHHH
Confidence 355667998875543 22 66777889999999999999999962 577999999999999999999
Q ss_pred hcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 002356 232 VVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (931)
Q Consensus 232 llG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (931)
++|+++..+.++++.......+......+.....++. .++|...| .+.++++.. +|. ..+++.+.|||++++++.
T Consensus 174 l~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~~~~~~-~~~~~~~~~-~~~-~~~l~~~~dit~~~~~e~ 248 (442)
T TIGR02040 174 LVGRAFPQEFEGRRREELMLTLRNVRATGSAAPVRIL--LRRSQKRL-LVVVSVFRQ-DGE-SLFLCQLSPAGATQPVGD 248 (442)
T ss_pred HcCCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEE--EcCCCeEE-EEEEEEEEe-CCc-eEEEEEEcccchhhhhhH
Confidence 9999988777777666666777777777765555544 33444344 445666654 333 357788999999988776
Q ss_pred HhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhh-hcccccCCCCCCCCCCC
Q 002356 312 DKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEE-RAGALGRRKSENVPPPR 389 (931)
Q Consensus 312 ~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 389 (931)
+++. ....+..... .....+....+..+|..+...+|+. .++++|+....++....
T Consensus 249 ~~~~----------------------~~~~l~e~~~d~I~v~D~~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~ 306 (442)
T TIGR02040 249 ELSE----------------------NLARLYHEAPDAIVFSDADGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGG 306 (442)
T ss_pred HHHH----------------------HHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCc
Confidence 5430 1222333333 3344556667888999999999997 57799999876554221
Q ss_pred CCC-CCCCcccccccccccchhcccccCCccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHH
Q 002356 390 RNS-YGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQ 465 (931)
Q Consensus 390 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~ 465 (931)
... ..............+......++|+.+|+.....+..+.++. ..+. ..+|||+|+..+
T Consensus 307 ~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~~-~~~~--------------v~rDITeR~~~~ 368 (442)
T TIGR02040 307 VDLRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGERP-LIVL--------------VIRDISRRLTMR 368 (442)
T ss_pred ccHHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCce-EEEE--------------EEecchhhccCC
Confidence 110 000000111122233444568899999998888777654332 2211 247888877664
No 452
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.36 E-value=3.2e-12 Score=160.05 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=122.7
Q ss_pred CCCchhhHHHHHhhhhc-ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHH
Q 002356 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (931)
Q Consensus 455 ~~dv~~r~~~~~~l~~~-~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 533 (931)
.+++.+|.+.++++++. ..++.++++++++|+++|.+|+ |+++|++|++++||+.++++|+++..+++++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 46778888888888665 6799999999999999999888 9999999999999999999999988888887666666
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccc
Q 002356 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (931)
Q Consensus 534 ~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~ 594 (931)
......+..+..+..+.+..+++|..+|+.++..|+++.+|.+.+++++++|||++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~ 274 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQD 274 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHH
Confidence 7777777888888999999999999999999999999999999999999999999998543
No 453
>PRK13559 hypothetical protein; Provisional
Probab=99.36 E-value=1.1e-11 Score=140.76 Aligned_cols=122 Identities=44% Similarity=0.808 Sum_probs=108.8
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
..|+.++++++++|+++|.++.+++|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+..
T Consensus 43 ~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 122 (361)
T PRK13559 43 RLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELL 122 (361)
T ss_pred hHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEE
Confidence 44888999999999999986555569999999999999999999999988777777777777777888888888888999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
.+++||..+|+.++..|+++.+|.+.+++++++|||++|+.+
T Consensus 123 ~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e 164 (361)
T PRK13559 123 NYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVR 164 (361)
T ss_pred EEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhH
Confidence 999999999999999999999999999999999999999854
No 454
>PRK13557 histidine kinase; Provisional
Probab=99.34 E-value=6.2e-12 Score=150.43 Aligned_cols=125 Identities=42% Similarity=0.802 Sum_probs=112.2
Q ss_pred ccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002356 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (931)
Q Consensus 472 ~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (931)
..|..+++.++++|+++|.++.+++|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+.+
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 45999999999999999975555569999999999999999999999998888888888778888888888888888898
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
..+++|+.+|+.+++.|+++.+|.+++++++.+|||++++.+...
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l 154 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDAL 154 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHH
Confidence 899999999999999999999999999999999999999865433
No 455
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.31 E-value=8.3e-12 Score=144.19 Aligned_cols=142 Identities=23% Similarity=0.289 Sum_probs=98.4
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccCh---------------------------HHH----------HHH
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------------------NKV----------HRA 716 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~---------------------------~~~----------~~~ 716 (931)
.+.||.|++|+||++.. .+|+.||||+..++....- ... -.+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999987 4789999999876421100 000 013
Q ss_pred HHHHHHHHhc-----CCCCc--cceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 002356 717 CAEREILDML-----DHPFV--PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLH 788 (931)
Q Consensus 717 ~~E~~il~~l-----~hpnI--v~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~-aL~~LH 788 (931)
.+|...+..+ ++++| ++++. ...+..+|||||++|++|.++....... .. ...++..++. .+..+|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHH
Confidence 3455555554 23433 33332 2334579999999999999886532111 22 2345566665 478899
Q ss_pred HCCCccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 002356 789 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (931)
Q Consensus 789 ~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~ 822 (931)
..|++|+|+||.||+++.+|.++++|||++...+
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999999986543
No 456
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.31 E-value=9.2e-12 Score=141.75 Aligned_cols=164 Identities=25% Similarity=0.381 Sum_probs=132.1
Q ss_pred HHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCc
Q 002356 723 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 801 (931)
Q Consensus 723 l~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gI-iHrDIKP~N 801 (931)
|+.+.|.|+.++++.+.++...++|.+||..|+|.+.+... ...++.--...++++|+.||.|||...| .|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 45689999999999999999999999999999999999863 3447778888899999999999999865 999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCC-------
Q 002356 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 874 (931)
Q Consensus 802 Ill~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~------- 874 (931)
.+++....+||+|||+......... ........-..-|.|||.+....
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------ccccchhHHHHhccCHHHhccccccccccc
Confidence 9999999999999999855321000 00011112445799999997642
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCC----CCHHHHHHHHHc
Q 002356 875 HTSAVDWWALGILLYEMLYGYTPFRG----KTRQKTFANILH 912 (931)
Q Consensus 875 ~~~~~DiwSlGvil~ell~G~~Pf~~----~~~~~~~~~I~~ 912 (931)
.+.+.|+||||+++||+++.+.||.. .++.+++..+.+
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~ 176 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK 176 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 34579999999999999999999975 344678888777
No 457
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=1.9e-12 Score=151.04 Aligned_cols=146 Identities=18% Similarity=0.240 Sum_probs=96.0
Q ss_pred CCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC---------------------------hHH----HHH-
Q 002356 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------------------RNK----VHR- 715 (931)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~---------------------------~~~----~~~- 715 (931)
...|+. +.||+|++|+||++..+.+|+.||||+..++.... ... ...
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 346777 78999999999999998889999999998652100 001 111
Q ss_pred -----HHHHHHHHHhcC----CCCccceeEEE-EeCCeEEEEEeccCCCCHHHHH--hhCCC--CCCCHHHHHHHHHHHH
Q 002356 716 -----ACAEREILDMLD----HPFVPALYASF-QTKTHVCLITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVV 781 (931)
Q Consensus 716 -----~~~E~~il~~l~----hpnIv~l~~~~-~~~~~~~lVmE~~~ggsL~~~l--~~~~~--~~l~~~~~~~i~~qil 781 (931)
+.+|...+.++. +...+.+-.++ ...+..+|||||+.|+.|.++- ...+. +.+.+..+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 223444443331 32222222222 2245578999999999998753 22211 123344444444444
Q ss_pred HHHHHHHHCCCccCCCCCCcEEEecCC----cEEEEeccCCccc
Q 002356 782 VALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLT 821 (931)
Q Consensus 782 ~aL~~LH~~gIiHrDIKP~NIll~~~g----~vkL~DFG~a~~~ 821 (931)
+..|++|+|+||.||+++.+| .++++|||++...
T Consensus 277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 468999999999999999888 9999999998654
No 458
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.28 E-value=4.3e-11 Score=147.27 Aligned_cols=127 Identities=39% Similarity=0.747 Sum_probs=115.0
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 002356 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (931)
Q Consensus 189 ~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 268 (931)
..++.+++.+++++++.|..+.+|+|+|+|+++++++||+.++++|+++..+.++.........+...+..+..+..+++
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 45678999999999999876668899999999999999999999999988777777766677778888888888889999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
.++++|..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998874
No 459
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=4.9e-11 Score=121.56 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=102.0
Q ss_pred cccccccCcEEEEEEEEec------CCeEEEEEEeeccccc----------C---------hHHHHHHH----HHHHHHH
Q 002356 674 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVML----------N---------RNKVHRAC----AEREILD 724 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~------~~~~~AvK~~~~~~~~----------~---------~~~~~~~~----~E~~il~ 724 (931)
...||.|.-+.||.+.... .+..+|||+++..... + ......+. .|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998643 3579999988642210 0 01122233 7889999
Q ss_pred hcCC--CCccceeEEEEeCCeEEEEEeccCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCccCCCCCC
Q 002356 725 MLDH--PFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 800 (931)
Q Consensus 725 ~l~h--pnIv~l~~~~~~~~~~~lVmE~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~gIiHrDIKP~ 800 (931)
++.. -+++.++++ ...+|||||+.++.+.. .++. ..++...+..+..+++.+|..| |+.||||+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 8843 567777764 45689999996654432 2221 2355667778889999999999 8999999999999
Q ss_pred cEEEecCCcEEEEeccCCccc
Q 002356 801 NVLLQGNGHVSLTDFDLSCLT 821 (931)
Q Consensus 801 NIll~~~g~vkL~DFG~a~~~ 821 (931)
|||+. ++.+.|+|||.+...
T Consensus 155 NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEE-CCcEEEEECCCceeC
Confidence 99997 678999999998543
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=3.2e-11 Score=121.19 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=95.8
Q ss_pred cccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCC-ccceeEEEEeCCeEEEEEeccC
Q 002356 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 752 (931)
Q Consensus 674 ~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lVmE~~~ 752 (931)
++.|+.|.++.||++.. .+..|++|....... ....+..|..+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 35688999999999987 477899998765421 1224567899998885444 456665433 33579999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----ccCCCCCCcEEEecCCcEEEEeccCCc
Q 002356 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 819 (931)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gI-----iHrDIKP~NIll~~~g~vkL~DFG~a~ 819 (931)
|.++.... . ....++.+++.+|..||..++ +|+|++|+||+++ ++.++++||+.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98875430 1 123456899999999999985 9999999999999 7789999999984
No 461
>PRK10060 RNase II stability modulator; Provisional
Probab=99.23 E-value=7.6e-11 Score=144.27 Aligned_cols=148 Identities=14% Similarity=0.180 Sum_probs=116.4
Q ss_pred cccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCC-CCCCCCCChHHHH
Q 002356 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR-FLQGAGTDPEDVA 251 (931)
Q Consensus 173 dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~-~l~~~~~~~~~~~ 251 (931)
++++.....+.+......++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++. .+.++........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~ 171 (663)
T PRK10060 95 AWHDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHH
Confidence 34444444555667777889999999999999998 7779999999999999999999999975 4445555555667
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCC-CEEEEEEEEecchhhhHHHHHhhcC-----CCCCchhh
Q 002356 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKMLR-----PNGLPESL 324 (931)
Q Consensus 252 ~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G-~v~~~v~~~~DITerk~~e~~L~~~-----~~~l~~~l 324 (931)
.++..+..+..+.++.+.++++|..+|+.....+ .+..| ...+++++.+|||++++++++|+.. +.+|++|-
T Consensus 172 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTGL~NR~ 249 (663)
T PRK10060 172 NIRGFFRSGNAYEVERWIKTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 (663)
T ss_pred HHHHHHhcCCceEEEEEEEeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCCCcCHH
Confidence 7788888888899999999999999998766444 44444 4567889999999999999988752 45555553
No 462
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.20 E-value=1.6e-10 Score=112.89 Aligned_cols=146 Identities=19% Similarity=0.211 Sum_probs=111.7
Q ss_pred ccccccccCcEEEEEEEEecCCeEEEEEEe-----ecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEE
Q 002356 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----DKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (931)
Q Consensus 673 i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~-----~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (931)
.+..|-+|+-+.|+++.+ .|+.+.+|.= ....+..+-..++..+|+++|.++.--.|.-..-+|.+...-.|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 566788999999999988 6788888842 222333344567778999999988655554444456666777899
Q ss_pred EeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 002356 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (931)
Q Consensus 748 mE~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~~ 820 (931)
|||++| .++.+++...............+++.|-+.|.-||.++|||+||..+||++.++| .+.++|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999976 5888888765443344555578899999999999999999999999999998766 358999999843
No 463
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.20 E-value=1.7e-10 Score=145.05 Aligned_cols=168 Identities=14% Similarity=0.157 Sum_probs=130.1
Q ss_pred ecccCCCCCcceeEeccCCCCCCCCCCCccCCCCCcceEEEecccccccccccccchHHHHHHHHHhcCCcEEEEeCCCC
Q 002356 131 LKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKP 210 (931)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~dit~~~~~e~~l~~~~~~~~~ile~~~~~i~v~D~~~~ 210 (931)
++..+..|..-|+....... +..+....++++.|||++++.++ .++.+..+++.++++++++|.
T Consensus 91 ~~~~~~dG~~~~v~~~~~~~---------~~~g~~~~~~~~~DiT~~~~~~~----~~~~~~~~~~~~~~~i~~~d~--- 154 (799)
T PRK11359 91 LQLEKKDGSKIWTRFALSKV---------SAEGKVYYLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDP--- 154 (799)
T ss_pred eEEecCCcCEEEEEEEeeee---------ccCCceEEEEEEeeccchhhhHH----HHHHHHHHHhcCCCcEEEEcC---
Confidence 34445566666665443221 12223335667799998766544 455677889999999999998
Q ss_pred CCceEEcchHHHHHhCCChhhhcCCCCCCC-CCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecC
Q 002356 211 DYPIMYASAGFFKMTGYTSKEVVGRNCRFL-QGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDD 289 (931)
Q Consensus 211 dG~I~~~N~a~~~l~Gys~eEllG~~~~~l-~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~ 289 (931)
+|+++++|+++++++||+.++++|+++..+ .++.........+...+..+..+..+++..+++|..+|+.++..|+.|.
T Consensus 155 ~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~ 234 (799)
T PRK11359 155 ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 (799)
T ss_pred CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecC
Confidence 777999999999999999999999987644 4455555566667777777777888888899999999999999999999
Q ss_pred CCCEEEEEEEEecchhhhHHHHHhh
Q 002356 290 EGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 290 ~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
+|.+.+++++.+|||+++++++.++
T Consensus 235 ~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 235 LAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred CCceeEEEEEeehhhhHHHHHHHHH
Confidence 9999999999999999998876544
No 464
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.16 E-value=4.6e-10 Score=110.44 Aligned_cols=134 Identities=21% Similarity=0.213 Sum_probs=99.6
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEe
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE 749 (931)
..+++|+-+.+|.+.. -+..+++|.=.+.... ..-...+-.+|..++.++.--.|....=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999966 3445777753322222 22234556689999998865555444445556777889999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCCcc
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~ 820 (931)
|++|..|.+++... ...+++.+-.-+.-||..||||+||.++||++..+ .+.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence 99999999998764 13456777777888999999999999999999854 499999999853
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=2.8e-11 Score=137.86 Aligned_cols=209 Identities=23% Similarity=0.233 Sum_probs=161.7
Q ss_pred ccCCCccccccccc--cCcEEEEEEEE--ecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002356 666 INLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (931)
Q Consensus 666 ~~~~~y~i~~~LG~--G~~g~Vy~~~~--~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (931)
.....+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... ......+-.+|..-...+ .|++.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-CccccccccchhhcccccCccccccccCccccc
Confidence 44557888899999 99999999998 88899999997443221 112222334455555555 58999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCccCCCCCCcEEEecC-CcEEEEec
Q 002356 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDF 815 (931)
Q Consensus 741 ~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~----aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DF 815 (931)
.+..|+-+|+| +.+|..+...- ...+++..++..+.++.. ||.++|..+|+|-|+||.||++..+ ..++++||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 99999999999 78888877543 456899999999999999 9999999999999999999999988 78999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcCC
Q 002356 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (931)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 895 (931)
|+...++...-. ..+.......|...|++||...+- ++...|||+||.++.+..+|.
T Consensus 268 ~~v~~i~~~~~~----------------------~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 268 GLVSKISDGNFS----------------------SVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred ceeEEccCCccc----------------------cceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhc
Confidence 998765432211 001111223578899999998755 778999999999999998886
Q ss_pred CCCCC
Q 002356 896 TPFRG 900 (931)
Q Consensus 896 ~Pf~~ 900 (931)
.++..
T Consensus 325 ~~~~~ 329 (524)
T KOG0601|consen 325 HLPSV 329 (524)
T ss_pred ccccC
Confidence 66543
No 466
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.14 E-value=5.8e-10 Score=100.26 Aligned_cols=121 Identities=20% Similarity=0.406 Sum_probs=97.8
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC-cEEEE
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGR 266 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e 266 (931)
++.++.+++.++++++++|. +|.++++|+++++++|++.++++|+.+..+.++.........+...+..+. .....
T Consensus 2 ~~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (124)
T TIGR00229 2 EERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEE 78 (124)
T ss_pred chHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceE
Confidence 35678899999999999998 677999999999999999999999988766666555555555556555332 23344
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHH
Q 002356 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (931)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (931)
.....++|..+|+..+..|+. .+|...++++++.|||++++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 79 RRVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 454588999999999999998 788899999999999999988765
No 467
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.13 E-value=6e-10 Score=137.12 Aligned_cols=122 Identities=40% Similarity=0.752 Sum_probs=107.7
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
++.+++.+++++++.|..+.++.|+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+.+.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 57789999999999986433445999999999999999999999998888887777666777778888888889999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccccc
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~ 595 (931)
+++|..+|+.++..|+.+.+|.+.+++++++|||++|+.|..
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~ 271 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELA 271 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999986543
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.13 E-value=4.7e-10 Score=128.80 Aligned_cols=168 Identities=19% Similarity=0.259 Sum_probs=128.1
Q ss_pred EEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCC
Q 002356 688 VELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKV 767 (931)
Q Consensus 688 ~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~ 767 (931)
+..+.++.++.+..++... ........+-++.|+.++||||+++++.++..+..|||+|-+ ..|..+++.
T Consensus 31 ~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~----- 100 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE----- 100 (690)
T ss_pred cceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----
Confidence 4455677788888776542 134455677888999999999999999999999999999988 467777766
Q ss_pred CCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCcc
Q 002356 768 LKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPV 846 (931)
Q Consensus 768 l~~~~~~~i~~qil~aL~~LH-~~gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (931)
+....+..-+.||+.||.||| ..+++|++|.-+.|+++..|.-||++|.+++.......
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------------------- 160 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------------------- 160 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------------------
Confidence 335677777899999999998 56899999999999999999999999999854321110
Q ss_pred ccccccccccccccCCcccchhhhcCCCCCChhhHHHHHHHHHHHHcC
Q 002356 847 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (931)
Q Consensus 847 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G 894 (931)
......--..|..|+.+.... ...|.|.|||++++++.|
T Consensus 161 -------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 -------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 011112223466776654333 357999999999999999
No 469
>PRK10060 RNase II stability modulator; Provisional
Probab=99.12 E-value=6.2e-10 Score=136.26 Aligned_cols=117 Identities=17% Similarity=0.171 Sum_probs=96.0
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCC-CCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
++.+++.++++|+++|.+|+ |+++|++|++++||+.+|++|+++..++ ++++.......+...+..+..+..|.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67889999999999999988 9999999999999999999999965544 5555555566777778888889999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCC-EEEEEEEEecCCccccccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGE-VQYFIGVQLDGSEHLEPLR 594 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~-~~~~vgi~rDITerk~~e~ 594 (931)
.+++|..+|+..... +.+..|. ..+++++.+|||++|+.+.
T Consensus 190 ~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e~ 231 (663)
T PRK10060 190 KTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQE 231 (663)
T ss_pred EeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHHH
Confidence 999999999876544 4444554 4568899999999997543
No 470
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.09 E-value=2.6e-10 Score=134.59 Aligned_cols=117 Identities=26% Similarity=0.438 Sum_probs=105.9
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
|+.++++++++++++|.+|+ ++++|+++++++||++++++|++...+.++.........+...+..+..+..+....
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999988 999999999999999999999987777776666667777777787888888888888
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
+++|+.+|+..++.|+++.+|.+.+++++++|||++|+++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e 122 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLE 122 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHH
Confidence 9999999999999999999999999999999999999853
No 471
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.02 E-value=1.5e-09 Score=96.93 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.9
Q ss_pred eEEcchHHHHHhCCChhhhcCCC----CCCCCCCCCChHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeec
Q 002356 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (931)
Q Consensus 214 I~~~N~a~~~l~Gys~eEllG~~----~~~l~~~~~~~~~~~~l~~-~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d 288 (931)
|+|+|++|++++||+++++ |.. +..+++|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6678899999999999999 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002356 289 DEGKVLKFIGMQ 300 (931)
Q Consensus 289 ~~G~v~~~v~~~ 300 (931)
++|++.+++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 472
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=1.7e-10 Score=131.46 Aligned_cols=200 Identities=21% Similarity=0.280 Sum_probs=153.1
Q ss_pred ccccCCCccccccccccCcEEEEEEEEe-cCCeEEEEEEeecccccChHHHHHHHHHHHHHHhc-CCCCccceeEEEEeC
Q 002356 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (931)
Q Consensus 664 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (931)
......+|..+..||.|.|+.|+.+... .++..|++|.+..........+. -..|..+...+ -|.+++.++..+...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccc
Confidence 3455778999999999999999998765 67889999988765433333222 23466666666 589999988888888
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-CcEEEEeccCCcc
Q 002356 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCL 820 (931)
Q Consensus 742 ~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~-g~vkL~DFG~a~~ 820 (931)
...|+-.|||+++++...+.. ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||....
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred ccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 888899999999988876633 2447888999999999999999999999999999999999876 7889999998743
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCccc--chhhhcCCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~--aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
..... ....+.-+++ ++.......+..+.|++|||..+++.++|.+
T Consensus 417 ~~~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 417 LAFSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred cceec------------------------------ccccccccccccchhhccccccccccccccccccccccccCcc
Confidence 21110 1112233444 5555566778889999999999999988854
No 473
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.01 E-value=2.8e-09 Score=95.78 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=95.1
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcC-CcEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~-~~~~~e~~~ 552 (931)
++.+++.++++++++|.+|. ++++|+++++++|++.++++|++...+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999888 99999999999999999999998777777766555555555555533 234445555
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
...+|..+|+.....|+. .+|...+++++++|||++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~ 120 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQA 120 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHH
Confidence 688999999999999998 788899999999999998874
No 474
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.01 E-value=1.4e-09 Score=97.14 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.6
Q ss_pred EEecCHHHHHHcCCChhhhcCCC----CCCCCCCCCCHHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEEEeeec
Q 002356 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (931)
Q Consensus 497 I~~vN~a~~~l~Gys~eEllG~~----~~~l~~~~~~~~~~~~l~~-~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d 571 (931)
|+|+|+++++++||+++++ +.+ +..++||++...+.+.+.. .+..+..+..+++++++||+.+|+..++.+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 7778999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002356 572 QKGEVQYFIGVQ 583 (931)
Q Consensus 572 ~~G~~~~~vgi~ 583 (931)
.+|+++.++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.96 E-value=2.6e-09 Score=112.09 Aligned_cols=140 Identities=24% Similarity=0.320 Sum_probs=106.2
Q ss_pred ccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCC--CCccceeEEEEeC---CeEEEEEe
Q 002356 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 749 (931)
Q Consensus 675 ~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~---~~~~lVmE 749 (931)
+.|+.|.++.||++.... +..|++|........ .....+..|..+++.+.+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998743 578999987654221 134567889999999965 4567777776553 36789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 002356 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 789 (931)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------------------------------------- 789 (931)
|++|.+|...+.. ..++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999888765432 236677777778888888888874
Q ss_pred ----------------CCCccCCCCCCcEEEec--CCcEEEEeccCCcc
Q 002356 790 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 820 (931)
Q Consensus 790 ----------------~gIiHrDIKP~NIll~~--~g~vkL~DFG~a~~ 820 (931)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 56789999998843
No 476
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.88 E-value=4.6e-08 Score=105.39 Aligned_cols=134 Identities=19% Similarity=0.064 Sum_probs=94.7
Q ss_pred EEEEEEEecCCeEEEEEEeecccccC--------hHHHHHHHHHHHHHHhcCCCCc--cceeEEEEe-----CCeEEEEE
Q 002356 684 SVHLVELCGSGQYFAMKAMDKGVMLN--------RNKVHRACAEREILDMLDHPFV--PALYASFQT-----KTHVCLIT 748 (931)
Q Consensus 684 ~Vy~~~~~~~~~~~AvK~~~~~~~~~--------~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~-----~~~~~lVm 748 (931)
.|+.+.. .|+.|.||......... ........+|...+..|..-+| +.++.++.. ...-+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3556554 56789999764322100 0111136688888877743333 344555543 23468999
Q ss_pred eccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-------CCcEEEEeccCCc
Q 002356 749 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 819 (931)
Q Consensus 749 E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~-------~g~vkL~DFG~a~ 819 (931)
|++++. +|.+++........+......++.+++..+.-||..||+|+|++++|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999876 8999986422234567788899999999999999999999999999999985 4689999999884
No 477
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.85 E-value=2.9e-08 Score=112.22 Aligned_cols=221 Identities=17% Similarity=0.184 Sum_probs=152.3
Q ss_pred HHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 002356 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (931)
Q Consensus 192 ~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 271 (931)
+.+|+.+.++++++|.. ..|.++|..+..+++-....++|+++..+.++...+.. . .+..+..-.....
T Consensus 4 ~~~l~~~~~~~~vi~~~---~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v-------~-~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDKN---TGIDVANALALAKRQKNAEAVIGRPLREILETLGMERV-------E-QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEcC---CceeeechHHHHhhhcceEEEecccceeeccccCccee-------e-ccCccceeeeeec
Confidence 45899999999999984 45999999999999999999999988766655443221 1 2222222222223
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhHHHHHHHHHhHHHHHHHHHHccCCCC
Q 002356 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (931)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 351 (931)
+ + .. ..+...++.++.|+++|++.++.|+++..+.-.+..
T Consensus 73 ~-~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~l------------------------------------- 112 (560)
T COG3829 73 K-V-KR-IVVVGKTPVDEQGRVVGVLEVFLDISEALELIEENL------------------------------------- 112 (560)
T ss_pred c-c-ee-EEEcCCceeecCCceeeeehhhhhhHHHHHHHHHHH-------------------------------------
Confidence 3 3 22 233334456778999999999999998444322210
Q ss_pred cccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhcccccCCccccccccccccCC
Q 002356 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (931)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (931)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCC
Q 002356 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (931)
Q Consensus 432 ~~~~~~~~~i~~~~~~~~~~~~~~~dv~~r~~~~~~l~~~~~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys 511 (931)
+.++ ..|+.+++.+.++++++|.+|. ++++|.++..++|++
T Consensus 113 -------------------------------~~~~-----~~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 113 -------------------------------RQLR-----QRLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred -------------------------------HHHH-----HHHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 0011 1289999999999999999999 999999999999999
Q ss_pred hhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 512 ~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
.++++|++...+...... ......+..+++.......+..++ . ..+..|++ .+|.+.|.+++++|+++-..
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~--~--i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNK--I--IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCc--e--eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999997666511111 123445666666554444333222 2 34456665 46799999999999998765
No 478
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.83 E-value=1.5e-08 Score=102.97 Aligned_cols=126 Identities=24% Similarity=0.198 Sum_probs=82.2
Q ss_pred EEEEEEecCCeEEEEEEeecccccC-----------------------hHHHHHHHHHHHHHHhcCCC--CccceeEEEE
Q 002356 685 VHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAEREILDMLDHP--FVPALYASFQ 739 (931)
Q Consensus 685 Vy~~~~~~~~~~~AvK~~~~~~~~~-----------------------~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~ 739 (931)
||.|.. ..+..+|+|+.......- ........+|.++|..+..- ++++++++.
T Consensus 2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 788877 567899999886431110 01123455799999999655 677777552
Q ss_pred eCCeEEEEEeccC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCccCCCCCCcEEEecCCcEEEEecc
Q 002356 740 TKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (931)
Q Consensus 740 ~~~~~~lVmE~~~--ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~-LH~~gIiHrDIKP~NIll~~~g~vkL~DFG 816 (931)
..+|||||++ |..+..+.... ++.+....++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecC
Confidence 3469999998 66665544332 2234567778888885555 579999999999999999966 99999999
Q ss_pred CCcc
Q 002356 817 LSCL 820 (931)
Q Consensus 817 ~a~~ 820 (931)
.+..
T Consensus 152 qav~ 155 (188)
T PF01163_consen 152 QAVD 155 (188)
T ss_dssp TEEE
T ss_pred ccee
Confidence 8843
No 479
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.80 E-value=1.3e-07 Score=80.60 Aligned_cols=103 Identities=27% Similarity=0.422 Sum_probs=88.9
Q ss_pred ccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (931)
Q Consensus 481 ~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (931)
++++++++|.+|. ++++|+++++++|++.++++|++...++++.........+...+..+.....+......+|...
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999888 9999999999999999999999987778877776666666666666666778888888899999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEecC
Q 002356 561 WNLFHLQPMRDQKGEVQYFIGVQLDG 586 (931)
Q Consensus 561 wv~~~~~pi~d~~G~~~~~vgi~rDI 586 (931)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 480
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.80 E-value=1.2e-07 Score=80.66 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=86.8
Q ss_pred cCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002356 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (931)
Q Consensus 198 ~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 277 (931)
++++++++|. +|.++++|+++++++|++.++++|+.+..+.++.........+...+..+.....++.....+|...
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3578899988 6779999999999999999999999887677776666666666666666666777888888889999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecc
Q 002356 278 WNLLTIAPIKDDEGKVLKFIGMQVEV 303 (931)
Q Consensus 278 w~~~~~~pi~d~~G~v~~~v~~~~DI 303 (931)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 481
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.77 E-value=2.7e-08 Score=110.78 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=88.9
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEE
Q 002356 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 185 ~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
.+..+.|+.++++++++++++|. +|+|+++|++|++++||+.++++|+++..+..+ . .++..+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~---~----~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH---P----EFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC---H----HHHHHHHhccc-C
Confidence 45667899999999999999998 777999999999999999999999987755443 2 23334443332 2
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
.......++|..+|+.+++.|+.+.+ ++++++|||++++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 23445568899999999999987642 6788999999999877655
No 482
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=1.4e-08 Score=106.99 Aligned_cols=154 Identities=24% Similarity=0.306 Sum_probs=114.7
Q ss_pred HHHHHhcCCCCccceeEEEEeC-----CeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 002356 720 REILDMLDHPFVPALYASFQTK-----THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-- 790 (931)
Q Consensus 720 ~~il~~l~hpnIv~l~~~~~~~-----~~~~lVmE~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-- 790 (931)
...|-++.|.|||+++.|+.+. ..+.+++||+..|+|.++|++- -.+.+.....++|+.||+.||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 3445566899999999998643 4578899999999999999852 235688899999999999999999998
Q ss_pred CCccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhh
Q 002356 791 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII 870 (931)
Q Consensus 791 gIiHrDIKP~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~ 870 (931)
-|+|+++..+-|++..+|-+|+.-...... .+... .+ .-.......|-++|.+||.=
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~~--~~------------------~~~Ek~~~~~~~g~~a~~sg 254 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSVN--ST------------------REAEKSVNTSLPGFSAPESG 254 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCcccc---chhhh--hh------------------hHhhhhccccCCccccCCcC
Confidence 499999999999999888887753222110 00000 00 00112233567899999986
Q ss_pred cCCCCCChhhHHHHHHHHHHHHcCCC
Q 002356 871 AGAGHTSAVDWWALGILLYEMLYGYT 896 (931)
Q Consensus 871 ~~~~~~~~~DiwSlGvil~ell~G~~ 896 (931)
.......++|||+||.+..+|..|..
T Consensus 255 ~~tn~~~a~dIy~fgmcAlemailEi 280 (458)
T KOG1266|consen 255 TTTNTTGASDIYKFGMCALEMAILEI 280 (458)
T ss_pred cccccccchhhhhhhHHHHHHHHhee
Confidence 66666679999999999999987754
No 483
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.75 E-value=8.1e-08 Score=108.38 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=92.5
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 002356 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (931)
Q Consensus 188 ~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 267 (931)
...++++++++++|++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+....
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 35678999999999999998 77899999999999999999999999876655432 22344556666666555444
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 002356 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (931)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~ 314 (931)
..+.+||..+|+.++.+|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 55678999999999999986 2 346778999999998877664
No 484
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.73 E-value=1.5e-07 Score=113.92 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=104.8
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCC
Q 002356 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (931)
Q Consensus 182 ~~l~~~~~~~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 261 (931)
..+...+..++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 45667778889999999999999998 77799999999999999999999999887666442 23344555565554
Q ss_pred c-EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 002356 262 S-YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (931)
Q Consensus 262 ~-~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~L~~ 315 (931)
. ...++...+++|..+ +.++..|+.|.+|.+.+++++++|||++++++++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 4 334566677888776 8899999999999999999999999999999998763
No 485
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.72 E-value=4.1e-08 Score=110.77 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=87.9
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
.++.+++++++|++++|.+|. |+++|+++++++||+.++++|+++..+.+.... ....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFSL--NIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcchh--hHHHHHHHHHcCCcccccceE
Confidence 489999999999999999888 999999999999999999999998777654322 223445556665555444555
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
+.+||..+|+.++..|+. . .+++..++|||++++.+
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~ 118 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLS 118 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHH
Confidence 667999999999999986 2 24677789999988743
No 486
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=1.6e-07 Score=105.03 Aligned_cols=133 Identities=17% Similarity=0.238 Sum_probs=106.9
Q ss_pred EEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHhcCCCCccceeEEEE----eCCeEEEEEeccCC-CCHH
Q 002356 683 GSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHVCLITDYCPG-GELF 757 (931)
Q Consensus 683 g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~~lVmE~~~g-gsL~ 757 (931)
.+.|++...-+|..|++|.++....... ...-.-.++++++.|+|||.+.++|. .+..+++|++|.++ ++|.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 5789999999999999999954322221 12233578899999999999999987 34678999999875 5787
Q ss_pred HHHhhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 758 LLLDRQ-------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 758 ~~l~~~-------------~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
++.-.. .+...+++.+|.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|...|..
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccce
Confidence 764321 1234788999999999999999999999999999999999998888888887765
No 487
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.68 E-value=1.4e-07 Score=114.15 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=96.2
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCc-EEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLI 551 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~ 551 (931)
.++.++++++++++++|.+|. |+++|+++++++||+.++++|+++..+.++.. .....+...+..+.. ...+..
T Consensus 263 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 337 (607)
T PRK11360 263 LNELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEIS 337 (607)
T ss_pred HHHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEE
Confidence 478899999999999999888 99999999999999999999999877776542 233444555555443 345666
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccC
Q 002356 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (931)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e~~~ 596 (931)
..+++|..+ +.++..|+.+.+|++.+++++++|||++++.|...
T Consensus 338 ~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l 381 (607)
T PRK11360 338 FPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRV 381 (607)
T ss_pred EEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHH
Confidence 777888876 88999999999999999999999999999865433
No 488
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.66 E-value=2.5e-07 Score=100.73 Aligned_cols=192 Identities=21% Similarity=0.285 Sum_probs=130.0
Q ss_pred cccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHHHHHHHHHHHh-cCCCCccceeEE------EEe-CCe
Q 002356 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYAS------FQT-KTH 743 (931)
Q Consensus 672 ~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~------~~~-~~~ 743 (931)
...+.||+|+.+.+|-+..- .-.+.|++.+.....+. + -...|.. -.||-+..-+.+ ..+ +..
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~a---q---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQA---Q---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHHH---H---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 34567999999999987543 33667888764321111 1 1222222 256644321111 112 233
Q ss_pred EEEEEeccCCCC-HHHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEEEEeccCC
Q 002356 744 VCLITDYCPGGE-LFLLLD----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (931)
Q Consensus 744 ~~lVmE~~~ggs-L~~~l~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vkL~DFG~a 818 (931)
..++|..+.|.. +..++. ++........-+...++.|+.+.+.||..|.+-+|+.++|+|+++++.|.|.|-...
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 678898887642 222222 223345677888899999999999999999999999999999999999999986543
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCccccccccccccccccCCcccchhhhc-----CCCCCChhhHHHHHHHHHHHHc
Q 002356 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLY 893 (931)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~ 893 (931)
..- .+....-.-+|.+.|++||.-. +..-+..+|.|.||+++++++.
T Consensus 165 qi~----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ 216 (637)
T COG4248 165 QIN----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLF 216 (637)
T ss_pred eec----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHh
Confidence 211 1122334568999999999864 3344568999999999999998
Q ss_pred C-CCCCCC
Q 002356 894 G-YTPFRG 900 (931)
Q Consensus 894 G-~~Pf~~ 900 (931)
| ++||.|
T Consensus 217 ggrHPysG 224 (637)
T COG4248 217 GGRHPYSG 224 (637)
T ss_pred cCCCCCCc
Confidence 6 999986
No 489
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.66 E-value=1.7e-07 Score=97.83 Aligned_cols=138 Identities=22% Similarity=0.194 Sum_probs=103.9
Q ss_pred ccccccccccCcEEEEEEEEecCCeEEEEEEeecccccC------h-------------HHHHHHHHHHHHHHhcCCC--
Q 002356 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------R-------------NKVHRACAEREILDMLDHP-- 729 (931)
Q Consensus 671 y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~------~-------------~~~~~~~~E~~il~~l~hp-- 729 (931)
+.+...||-|.-|.||.|.+. .|.++|||.-..+...- . .......+|.++|+.|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 445578999999999999985 68899999754321110 0 0123345789999999654
Q ss_pred CccceeEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q 002356 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (931)
Q Consensus 730 nIv~l~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~ 809 (931)
.|++.+++ +...+||||++|-.|.... ++.+....++..|++-+.-+-..||||+|+.+=||+++.+|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 78888765 6678999999987775543 234455666677777777666899999999999999999999
Q ss_pred EEEEeccCCcc
Q 002356 810 VSLTDFDLSCL 820 (931)
Q Consensus 810 vkL~DFG~a~~ 820 (931)
+.++||-.+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999998743
No 490
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.64 E-value=1.5e-07 Score=86.76 Aligned_cols=106 Identities=15% Similarity=0.254 Sum_probs=73.6
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCCCCCCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (931)
Q Consensus 191 ~~~ile~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 270 (931)
++.+|++++.+++++|. +++|+|+|+++.++++.. +..+|+++..+.++........ +.+.+..+.....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~-~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKK-IIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHH-HHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHH-HHHHHHcCCCceEEEEe-
Confidence 46899999999999998 777999999999999976 4568999988876633333333 44555556543333332
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 002356 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (931)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (931)
..+| .|+.+++.|++|.+|+..|++.++.|||
T Consensus 75 ~~~~--~~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGG--RWYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETT--EEEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCC--EEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 3555 3788899999999999999999999998
No 491
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.63 E-value=4.3e-07 Score=94.56 Aligned_cols=126 Identities=25% Similarity=0.245 Sum_probs=91.9
Q ss_pred CCeEEEEEEeeccccc----ChHHHHHHHHHHHHHHhcCCC--CccceeEEEEeC----CeEEEEEeccCCC-CHHHHHh
Q 002356 693 SGQYFAMKAMDKGVML----NRNKVHRACAEREILDMLDHP--FVPALYASFQTK----THVCLITDYCPGG-ELFLLLD 761 (931)
Q Consensus 693 ~~~~~AvK~~~~~~~~----~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~~----~~~~lVmE~~~gg-sL~~~l~ 761 (931)
..+.|-+|........ .+-...+..+|...+..|..- .++.++.+.... ...+||||+++|. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 4556666654322111 112334567788887777433 355666666542 2458999999874 8999987
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 002356 762 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (931)
Q Consensus 762 ~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g---~vkL~DFG~a~~ 820 (931)
.... ++......++.+++..+.-||.+||+|+|++|.|||++.++ .+.++||+.+..
T Consensus 111 ~~~~--~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWEQ--LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhcc--cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 6332 66778889999999999999999999999999999999887 899999998754
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.61 E-value=9.1e-07 Score=90.61 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=102.8
Q ss_pred cccCcEEEEEEEEecCCeEEEEEEeecc---cccChHHHHHHHHHHHHHHhcCCC--CccceeEEEEe----CCeEEEEE
Q 002356 678 GSGDTGSVHLVELCGSGQYFAMKAMDKG---VMLNRNKVHRACAEREILDMLDHP--FVPALYASFQT----KTHVCLIT 748 (931)
Q Consensus 678 G~G~~g~Vy~~~~~~~~~~~AvK~~~~~---~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~----~~~~~lVm 748 (931)
|+||.|.|+..... |..|=+|.-... ....+.....+.+|...|+.|..- .++++...... .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 78999999998763 346778865411 111133556788899998888432 25555522211 12358999
Q ss_pred eccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc--EEEEeccCCcc
Q 002356 749 DYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (931)
Q Consensus 749 E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~--vkL~DFG~a~~ 820 (931)
|-+.| .+|.+++....-...+......++.+|+.+|.-||..|+.|+|+-+.||+++.+|. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98743 68988886543334677888899999999999999999999999999999986777 99999998753
No 493
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.58 E-value=1.5e-07 Score=104.55 Aligned_cols=119 Identities=27% Similarity=0.600 Sum_probs=104.3
Q ss_pred HHHHHhhcc---ceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CCCCCCCCCCHHHHHHHHHHHHcCCcEEE
Q 002356 474 LATTLERIE---KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (931)
Q Consensus 474 l~~i~e~~~---d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (931)
|+.++..+. ..+++-+++-.|++|+|+|+.||++.||.+.|++.++ +.+++.+-.+....+.++..+...+.-.+
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 666665443 4566666776799999999999999999999999988 56677777777888889999998888899
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
|+.++.|+.+..|..+.+.||+++...++.|+..++|||..|++
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 99999999999999999999999999999999999999999985
No 494
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.57 E-value=2.3e-07 Score=103.28 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=81.7
Q ss_pred cHHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002356 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (931)
Q Consensus 473 ~l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (931)
+|+.++++++++|+++|.+|. |+++|++|++++||++++++|+++..+.+++ . +...+..+.. ......
T Consensus 7 ~l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~----~~~~l~~~~~-~~~~~~ 75 (333)
T TIGR02966 7 RFRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP---E----FVEYLAAGRF-SEPLEL 75 (333)
T ss_pred HHHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH---H----HHHHHHhccc-CCCeEe
Confidence 489999999999999999988 9999999999999999999999977665542 2 2223333222 223455
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 002356 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (931)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~ 592 (931)
..++|..+|+.+...|+.+.. ++++++|||++++.
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~ 110 (333)
T TIGR02966 76 PSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRL 110 (333)
T ss_pred ecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHH
Confidence 568899999999999987542 67889999998873
No 495
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.55 E-value=8.7e-07 Score=91.02 Aligned_cols=141 Identities=21% Similarity=0.249 Sum_probs=95.5
Q ss_pred ccCCCccccccccccCcEEEEEEEEecCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhc---CCCCccceeE
Q 002356 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDML---DHPFVPALYA 736 (931)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~AvK~~~~~~~~~~~~~~~------~~~E~~il~~l---~hpnIv~l~~ 736 (931)
+....|.+.+.+-......|.++.- ++..|++|............... ..+++..+..+ +.-....++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 4567899999999888888888876 67899999876542221111111 12334433333 2233333332
Q ss_pred EEE-----eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcEE
Q 002356 737 SFQ-----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (931)
Q Consensus 737 ~~~-----~~~~~~lVmE~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gIiHrDIKP~NIll~~~g~vk 811 (931)
+.. -....+++|||++|..|.++.. +++ .+...|.++|.-||+.|+.|+|..|+|++++ ++.++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~-~~~i~ 174 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS-NNGIR 174 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE-CCcEE
Confidence 222 2345678999999998876643 222 2456777889999999999999999999998 55699
Q ss_pred EEeccCCc
Q 002356 812 LTDFDLSC 819 (931)
Q Consensus 812 L~DFG~a~ 819 (931)
++||+..+
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99999764
No 496
>PF12860 PAS_7: PAS fold
Probab=98.55 E-value=2.5e-07 Score=86.70 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=74.0
Q ss_pred HHhcCCcEEEEeCCCCCCceEEcchHHHHHhCCChhhh-cCCCCCCCC---------CCCCChHHHHHHHHHHHcCCcEE
Q 002356 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 195 le~~~~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl-lG~~~~~l~---------~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
|+++++||+++|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.............+.......
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999998 7779999999999999999988 788754221 22222233333333344444333
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (931)
.+ ....||. |++++..|+ .+| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3467785 678888888 445 56789999999998874
No 497
>PF12860 PAS_7: PAS fold
Probab=98.53 E-value=2.7e-07 Score=86.42 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=74.0
Q ss_pred HhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhh-cCCCCCCCC---------CCCCCHHHHHHHHHHHHcCCcEE
Q 002356 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 547 (931)
Q Consensus 478 ~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEl-lG~~~~~l~---------~~~~~~~~~~~l~~~l~~~~~~~ 547 (931)
++++++||++.|.+|+ ++++|++|.+++|++.+.+ .|.+...++ .+.....................
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4688999999999888 9999999999999999998 787754432 22222333333333334433333
Q ss_pred EEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 002356 548 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (931)
Q Consensus 548 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~~e 593 (931)
.+ ....||. |+.++..|+ .+| |+|.++.|||+++++|
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhc
Confidence 33 3457887 777888888 456 6788999999999865
No 498
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.52 E-value=3.7e-07 Score=84.21 Aligned_cols=106 Identities=20% Similarity=0.317 Sum_probs=73.8
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
++.++++++.+++++|.+++ |.++|+++.++|+.. ...+|++...+.++.......+.+ ..+..+.....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46789999999999999888 999999999999976 466899988887664444444444 444455542333332
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDIT 587 (931)
..+|. |+.+.+.|+++.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35555 677889999999999999999999998
No 499
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.52 E-value=3.2e-07 Score=102.09 Aligned_cols=121 Identities=31% Similarity=0.629 Sum_probs=103.3
Q ss_pred HHHHHHHhcC---CcEEEEeCCCCCCceEEcchHHHHHhCCChhhhcCCCCC--CCCCCCCChHHHHHHHHHHHcCCcEE
Q 002356 190 IVKDALSTFQ---QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYC 264 (931)
Q Consensus 190 ~~~~ile~~~---~~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEllG~~~~--~l~~~~~~~~~~~~l~~~l~~g~~~~ 264 (931)
.++.++.-+. ..+++-+.+-.|..|+|+|..||++.||.+.|+.-+++. +++....+....+.++++++..+.-+
T Consensus 15 FLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~q 94 (971)
T KOG0501|consen 15 FLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQ 94 (971)
T ss_pred HHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcc
Confidence 4444444333 345555555568889999999999999999999998864 78888888899999999999999888
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHH
Q 002356 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (931)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (931)
.|+..++|+...+|+.+.+.||+++...++-|+++++|||..|+--
T Consensus 95 fEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPi 140 (971)
T KOG0501|consen 95 FEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPI 140 (971)
T ss_pred eeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCC
Confidence 9999999999999999999999999999999999999999988753
No 500
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.48 E-value=6.4e-06 Score=100.72 Aligned_cols=107 Identities=16% Similarity=0.194 Sum_probs=78.2
Q ss_pred HHHHHhhccceEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCCCCCCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002356 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (931)
Q Consensus 474 l~~i~e~~~d~I~v~D~~G~d~~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (931)
+..+++.+.++|+++|.+|+ |+++|+++++++|++.++++|++...+++.. ..+...+..+..........
T Consensus 205 ~~~il~~~~~gVl~vD~~G~---I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~------~~l~~vl~~~~~~~~~~~~l 275 (638)
T PRK11388 205 LNALLESMDDGVIAWDEQGN---LQFLNAQAARLLRLDATASQGRAITELLTLP------AVLQQAIKQAHPLKHVEVTF 275 (638)
T ss_pred HHHHHhccCCcEEEECCCCe---EehhhHHHHHHhCcCHHHHCCCcHHHHhccc------hHHHHHHhcCCceeeEEEEE
Confidence 56789999999999999988 9999999999999999999999977665421 12334455555443333333
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 002356 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (931)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~~~~~vgi~rDITerk~ 591 (931)
..+|..+++.+++.|+.+..| .+++.+.+|++..++
T Consensus 276 ~~~g~~~~~~v~~~Pi~~~~g--~~~v~~l~~~~~~~~ 311 (638)
T PRK11388 276 ESQGQFIDAVITLKPIIEGQG--TSFILLLHPVEQMRQ 311 (638)
T ss_pred ecCCceEEEEEEEEeecccCc--eEEEEEehhhHHHHH
Confidence 456777788999999975444 346666788877543
Done!